kuzux

import java.io.*;

public class PagedFile{
    public static final int pageSize = 512;

    private RandomAccessFile f;
    
    public void PagedFile(String fileName){
        f = new RandomAccessFile(fileName);
    }

kuzux

-- average male hand size, in meters
-- taken from http://www.theaveragebody.com/average_hand_size.php
handSize :: Double
handSize = 0.189

planckLength :: Double
planckLength = 1.61619926e-35

-- assuming the 'child' hands are 1/5 the original size
-- find the number of iterations to reach the planck length

kuzux

decodeAnswer = function(idx){
    var toDecode = answers[idx].split(/\//)[0];
    var res = ""
    for(var i=0;i<toDecode.length;i++){
        var found = false;
        for(var k in asta){
            if(asta[k]==toDecode[i]){
                res += k;
                found = true;

kuzux

########
#      #
# #### #
# #  # #
# #  # #
# #### #
#      #
########

################

kuzux

{-# LANGUAGE OverloadedStrings, FlexibleInstances #-}

import Network.HTTP (urlEncode)
import Network.HTTP.Conduit
import Network.HTTP.Client (defaultManagerSettings)
import qualified Data.ByteString.Lazy.Char8 as L
import qualified Data.Text as T
import qualified Data.Vector as V
import Data.Aeson
import Control.Monad

kuzux

module Fasta where

import Control.Applicative

import qualified Data.Text as T
import qualified Data.Attoparsec.Text as A
import qualified Data.Attoparsec.Combinator as AC
import Data.Char
import Data.Either

kuzux

import java.io.File;
import java.io.FileNotFoundException;
import java.util.ArrayList;
import java.util.Scanner;


public class Main {
	
	static Scanner sc;
	static ArrayList<Integer> c1;

kuzux

#include <hidef.h>           /* common defines and macros */
#include "derivative.h"      /* derivative-specific definitions */

unsigned char mask;
unsigned char next_bit;
unsigned char data1, data2;

// we need to be able to update the leds with new scrambled data
// every 5 seconds and pause/resume the code via the push button
unsigned char counter;      // for keeping the frequency of 0.2Hz

kuzux

* Writing the explanation/help                     -> Ozge
* Title page                                       -> Sarah
* Main Visualization Part
  - Histone Markers/Genes                          -> Arda/Akin
  - Pathways                                       -> Sarah/Defne
* Discuss the pathways visualization/iterate on it -> Group
* Filtering the data to be more operable           -> Ulduz
  - Choosing the histone markers                   -> Acelya
  - Processing bigwig file?                        -> Ulduz/Arda
* Paper(s)                                         -> Everyone needs to write for themselves

kuzux

#include <hidef.h>
#include "derivative.h"

typedef enum {
    WAIT_FOR_RISING,
    WAIT_FOR_FALLING,
    RING_BUZZER
} State;

State currState;