lennax

#!/usr/bin/env python
# Copyright (c) 2014 Lenna X. Peterson, all rights reserved
# lenna@purdue.edu

import argparse
import csv
import glob
import logging
import math
import os

lennax

#!/usr/bin/env python3
# -*- coding: utf-8 -*-
# Copyright 2015 Lenna X. Peterson
# All rights reserved

import os
import socket
import subprocess
import sys

lennax

sbjct_aln = "C-GGLK-GAPFLAC"
query_aln = "CHG--KTGASFLQC"

gap = "-"

sbjct_idx = -1
query_idx = -1
for sbjct_resn, query_resn in zip(sbjct_aln, query_aln):

    # Check for gaps