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@beniwohli
beniwohli / unicode_to_latex.py
Created January 27, 2011 14:08
Map to convert unicode characters to their respective LaTeX representation
# original XML at http://www.w3.org/Math/characters/unicode.xml
# XSL for conversion: https://gist.github.com/798546
unicode_to_latex = {
u"\u0020": "\\space ",
u"\u0023": "\\#",
u"\u0024": "\\textdollar ",
u"\u0025": "\\%",
u"\u0026": "\\&",
@senko
senko / onchange.sh
Last active July 14, 2023 07:54
OnChange - Watch current directory and execute a command if anything in it changes
#!/bin/bash
#
# Watch current directory (recursively) for file changes, and execute
# a command when a file or directory is created, modified or deleted.
#
# Written by: Senko Rasic <senko.rasic@dobarkod.hr>
#
# Requires Linux, bash and inotifywait (from inotify-tools package).
#
# To avoid executing the command multiple times when a sequence of
@battlehorse
battlehorse / index.html
Created November 2, 2011 15:21
Demo script to convert Google Chart Tools charts into PNG images.
<html>
<head>
<script type="text/javascript" src="http://canvg.googlecode.com/svn/trunk/rgbcolor.js"></script>
<script type="text/javascript" src="http://canvg.googlecode.com/svn/trunk/canvg.js"></script>
<script>
function getImgData(chartContainer) {
var chartArea = chartContainer.getElementsByTagName('iframe')[0].
contentDocument.getElementById('chartArea');
var svg = chartArea.innerHTML;
var doc = chartContainer.ownerDocument;
@soemarko
soemarko / theme.html
Created November 26, 2011 16:18
embed github gist to tumblr
<!-- Add the following lines to theme's html code right before </head> -->
<script src="http://ajax.googleapis.com/ajax/libs/jquery/1.7.0/jquery.min.js"></script>
<script src="http://static.tumblr.com/fpifyru/VCxlv9xwi/writecapture.js"></script>
<script src="http://static.tumblr.com/fpifyru/AKFlv9zdu/embedgist.js"></script>
<!--
Usage: just add <div class="gist">[gist URL]</div>
Example: <div class="gist">https://gist.github.com/1395926</div>
-->
@fperez
fperez / ipython-0.0.1.py
Created January 8, 2012 21:05
IPython 0.0.1, a simple script to be loaded as $PYTHONSTARTUP: of historical interest only...
#!/usr/bin/env python
"""
Interactive execution with automatic history, tries to mimic Mathematica's
prompt system. This environment's main features are:
- Numbered prompts (In/Out) similar to Mathematica. Only actions that produce
output (NOT assingments, for example) affect the counter and cache.
- The following GLOBAL variables always exist (so don't overwrite them!):
_p: stores previous result which generated printable output.
@handerson
handerson / LICENSE
Created May 15, 2012 16:19
a very basic Pubmed search API in ruby
Copyright (c) 2012 Heath Anderson
Permission is hereby granted, free of charge, to any person obtaining a copy of this software and associated documentation files (the "Software"), to deal in the Software without restriction, including without limitation the rights to use, copy, modify, merge, publish, distribute, sublicense, and/or sell copies of the Software, and to permit persons to whom the Software is furnished to do so, subject to the following conditions:
The above copyright notice and this permission notice shall be included in all copies or substantial portions of the Software.
THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE O
@heiths
heiths / mayaOnUbuntu.sh
Last active February 28, 2024 18:50
Shell script to install and setup Autodesk Maya 2014 on Ubuntu 13.04
#!/bin/bash
#Heith Seewald 2012
#Feel free to extend/modify to meet your needs.
#Maya on Ubuntu v.1
#This is the base installer... I’ll add more features in later versions.
#if you have any issues, feel free email me at heiths@gmail.com
#### Lets run a few checks to make sure things work as expected.
#Make sure we’re running with root permissions.
if [ `whoami` != root ]; then
@nickloman
nickloman / rsync_ecoli.sh
Created October 29, 2012 15:14
Retrieve all Escherichia sequences from Genbank with rsync
rsync -av rsync://ftp.ncbi.nlm.nih.gov/genomes/Bacteria --include "*/" --include "Bacteria/Escherichia*/*.fna" --exclude=* .
# bonus script - concatenate chromosomes and plasmids into single fasta file, make sure the files don't already exist
find . -mindepth 1 -type d | xargs -L 1 -I '{}' find {} -name "*.fna" | while read i ; do cat "$i" >> `dirname "$i"`.fasta ; done
@philcryer
philcryer / gitrc
Last active May 5, 2020 00:00
This .gitrc activates when you're in a directory that is a git repo. It tells you the branch you're on, with color handling of the bash prompt according to the branch/status. For example, the prompt would look like this: [~/foo](master) $ with (master) colored GREEN, until you've added a file to the repo, but not committed it, then it will turn …
#!/bin/bash
#
# Set your bash prompt according to the branch/status of the current git repository.
#
# One-line install:
# curl https://gist.github.com/philcryer/5066010/raw/784e1e4c9df5289fe6f922fb6d122461d374758c/gitrc -o ~/.gitrc; echo "source ~/.gitrc" >> ~/.profile; source ~/.profile
#
# Originally forked from http://gist.github.com/31934 then modified liberally.
#
@nova77
nova77 / clip_magic.py
Last active October 24, 2023 18:50
copy to clipboard ipython magic
"""
Add copy to clipboard from IPython!
To install, just copy it to your profile/startup directory, typically:
~/.ipython/profile_default/startup/
Example usage:
%clip hello world
# will store "hello world"