Lydia Ng lydiang
lydiang
/ value_count.csv
Created
September 22, 2022 04:22
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| count | value | |
|---|---|---|
| 44658375 | 0 | |
| 6931 | 1 | |
| 7339 | 2 | |
| 134366 | 6 | |
| 70327 | 7 | |
| 14877 | 9 | |
| 130357 | 10 | |
| 5559 | 12 | |
| 14706 | 15 |
lydiang
/ download_adult_human_atlases.py
Created
September 24, 2022 23:40
Example code to download the adult human atlas images and svg from the Allen API
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| import urllib.request | |
| import json | |
| import os | |
| def fetch_atlas_metadata( atlas_id ) : | |
| # RMA query to find images for atlas | |
| query_url = "http://api.brain-map.org/api/v2/data/query.json?criteria=model::Atlas" | |
| query_url += ",rma::criteria,[id$eq%d]" % (atlas_id) | |
| query_url += ",rma::include,structure_graph(ontology),graphic_group_labels" |
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