Manodeep Sinha manodeep
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manodeep
/ Timings.py
Last active
August 10, 2023 04:11
— forked from synapticarbors/Timings.py
Attempt to create a faster version of a Euclidean pairwise distance method in cython using BLAS. Strategy for including BLAS taken from the Tokyo project.
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| import numpy as np | |
| from scipy.spatial.distance import cdist | |
| from distlib import pairwise_cython_blas, pairwise_cython, pairwise_cython_blas2 | |
| import timeit | |
| a = np.random.random(size=(10000,3)) | |
| loop = 1 | |
| repeat = 1 | |
| funcs = ['cdist(a,a)', 'pairwise_cython(a)', 'pairwise_cython_blas(a)', 'pairwise_cython_blas2(a)'] |