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@mikk-c
Created September 4, 2020 07:54
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{
"cells": [
{
"cell_type": "code",
"execution_count": 1,
"metadata": {},
"outputs": [],
"source": [
"import copy\n",
"import numpy as np\n",
"import networkx as nx"
]
},
{
"cell_type": "code",
"execution_count": 2,
"metadata": {},
"outputs": [],
"source": [
"def read_vector(filename):\n",
" v = {}\n",
" with open(filename, 'r') as f:\n",
" for line in f:\n",
" fields = line.strip().split('\\t')\n",
" value = float(fields[1])\n",
" if value > 0: \n",
" v[int(fields[0])] = value\n",
" v = {x: v[x] / sum(v.values()) for x in v}\n",
" return v"
]
},
{
"cell_type": "code",
"execution_count": 3,
"metadata": {},
"outputs": [],
"source": [
"G = nx.read_edgelist(\"1/data.txt\", delimiter = \"\\t\", nodetype = int)\n",
"\n",
"v1 = read_vector(\"1/vector1.txt\")\n",
"v2 = read_vector(\"1/vector2.txt\")"
]
},
{
"cell_type": "code",
"execution_count": 4,
"metadata": {},
"outputs": [
{
"name": "stdout",
"output_type": "stream",
"text": [
"5.296478772596982\n"
]
}
],
"source": [
"spls = dict(nx.shortest_path_length(G))\n",
"\n",
"print(sum(v1[origin] * v2[dest] * spls[dest][origin] for origin in v1 for dest in v2))"
]
}
],
"metadata": {
"kernelspec": {
"display_name": "Python 3",
"language": "python",
"name": "python3"
},
"language_info": {
"codemirror_mode": {
"name": "ipython",
"version": 3
},
"file_extension": ".py",
"mimetype": "text/x-python",
"name": "python",
"nbconvert_exporter": "python",
"pygments_lexer": "ipython3",
"version": "3.7.6"
}
},
"nbformat": 4,
"nbformat_minor": 4
}
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