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library(flycircuit) | |
# download NBLAST all by all score matrix (used e.g. for hierarchical clustering) | |
# this downloads a single 2Gb file to your machine as a one-off | |
fc_download_data('http://flybrain.mrc-lmb.cam.ac.uk/si/nblast/flycircuit/allbyallblastcv4.5.ff', | |
type='ff') | |
# set that as default all by all score matrix | |
options('flycircuit.scoremat'="allbyallblastcv4.5.ff") | |
# load neuron list | |
# the actual neuron data will be downloaded and cached to your machine on demand |