nbassler

import sys
import numpy as np


def get_token(f):
    """
    returns a tuple with 4 elements:
    0: payload id
    1: payload dtype string
    2: payload number of elements

nbassler

import pytrip as pt

dcmf = "/local/dicom/pinnacle3-9.9-phantom-imrt"

dcm = pt.dicomhelper.read_dicom_folder(dcmf)
basename = "foobar"


c = pt.CtxCube()
c.read_dicom(dcm)

nbassler

import pytrip as pt


>>> dir(rts)
['AccessionNumber', 'ApprovalStatus', 'InstanceCreationDate', 'InstanceCreationTime', 'Manufacturer', 'ManufacturerModelName',
 'Modality', 'PatientBirthDate', 'PatientID', 'PatientName', 'PatientSex', 'ROIContourSequence',
 'RTROIObservationsSequence', 'RefdFrameOfReferenceSequence', 'RefdStudySequence', 'ReferencedFrameOfReferenceSequence',
 'ReferencedStudySequence', 'ReferringPhysicianName', 'SOPClassUID', 'SOPInstanceUID', 'SeriesInstanceUID', 'SeriesNumber',
 'SoftwareVersions', 'SpecificCharacterSet', 'StationName', 'StructureSetDate', 'StructureSetLabel', 'StructureSetName',
 'StructureSetROISequence', 'StructureSetTime', 'StudyDate', 'StudyID', 'StudyInstanceUID', 'StudyTime', '__contains__',

nbassler

import pytrip as pt

#dcmf = "/local/dicom/pinnacle3-9.9-phantom-imrt"
dcmf = "/local/dicom/xio-4.33.02-phantom-chest/"
dcm = pt.dicomhelper.read_dicom_folder(dcmf)

dcmf2 = "chestdcm"
dcm2 = pt.dicomhelper.read_dicom_folder(dcmf2)

c1 = dcm['images']

nbassler

# first line below is necessary only in wxPython 2.8.11.0 since default 
# API in this wxPython is pubsub version 1 (expect later versions 
# of wxPython to use the kwargs API by default)
from wx.lib.pubsub import setupkwargs

# regular pubsub import
from wx.lib.pubsub import pub
 
class SomeReceiver(object):
    def __init__(self):

nbassler

How to rebase:
go to branch to be rebased
$ git rebase master

in case of conflict, fix/edit the file
$ git add file
$ git rebase --continue
repeat until nothing more to be applied.

git push feature/111-mybranch --force

nbassler

### Keybase proof

I hereby claim:

  * I am nbassler on github.
  * I am unabdingbar (https://keybase.io/unabdingbar) on keybase.
  * I have a public key ASCiRk0ACJmOXLBynm9X7T0gONnCZJIvtqWa3G41RoEiWgo

To claim this, I am signing this object:

nbassler

"""
Reworked code based on
http://trevorius.com/scrapbook/uncategorized/pyqt-custom-abstractitemmodel/

Adapted to Qt5 and fixed column/row bug.

TODO: handle changing data.
"""

import sys

nbassler

#include <stdio.h>
#include <stdlib.h>

/* gcc test_ppstruct.c -o test_ppstruct -Wall */

struct point {
  double x;
  double y;
};

nbassler

# Example of how to load DICOM data using PyTRiP

# lots of DICOM may be found at SlicerRT
# https://github.com/SlicerRt/SlicerRtData

import pytrip as pt


dp = "/local/dicom/pinnacle3-9.9-phantom-imrt/"
dcm = pt.dicomhelper.read_dicom_dir(dp)