Here are some files for converting SAM models to make it available in the BioEngine (local deployment: https://github.com/oeway/bioengine/).
The tree strcture for the model repository is like this:
├── sam-backbone
│ ├── 1
import sys, os | |
import imagej | |
import scyjava as sj | |
import argparse | |
import asyncio | |
import traceback | |
import numpy as np | |
import xarray as xr | |
from jpype import JOverride, JImplements | |
from imjoy_rpc.hypha import connect_to_server |
<docs lang="markdown"> | |
[TODO: write documentation for this plugin.] | |
</docs> | |
<config lang="json"> | |
{ | |
"name": "CodeInterpreter", | |
"type": "window", | |
"tags": [], | |
"ui": "", |
import logging | |
import sys | |
from urllib.parse import urljoin | |
import asyncio | |
import aiohttp | |
from aiohttp import web | |
TARGET_SERVER_BASE_URL = 'http://127.0.0.1:8888' |
<docs> | |
[TODO: write documentation for this plugin.] | |
</docs> | |
<config lang="json"> | |
{ | |
"name": "ImageViewerServices", | |
"type": "web-worker", | |
"tags": [], | |
"ui": "", |
<docs> | |
[TODO: write documentation for this plugin.] | |
</docs> | |
<config lang="json"> | |
{ | |
"name": "VizarrReferenceStore", | |
"type": "web-worker", | |
"tags": [], | |
"ui": "", |
Here are some files for converting SAM models to make it available in the BioEngine (local deployment: https://github.com/oeway/bioengine/).
The tree strcture for the model repository is like this:
├── sam-backbone
│ ├── 1
<docs lang="markdown"> | |
[TODO: write documentation for this plugin.] | |
</docs> | |
<config lang="json"> | |
{ | |
"name": "React UI Plugin", | |
"type": "window", | |
"tags": [], | |
"ui": "", |
<docs lang="markdown"> | |
[TODO: write documentation for this plugin.] | |
</docs> | |
<config lang="json"> | |
{ | |
"name": "stlite Demo", | |
"type": "window", | |
"tags": [], | |
"ui": "", |
<docs lang="markdown"> | |
[TODO: write documentation for this plugin.] | |
</docs> | |
<config lang="json"> | |
{ | |
"name": "PythonPlugin", | |
"type": "web-python", | |
"version": "0.1.0", | |
"description": "[TODO: describe this plugin with one sentence.]", |