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pabloferz / setup.sh
Created July 28, 2022 19:49
Setup PySAGES for OpenMM and HOOMD-blue
cd
rsync -a --exclude=*/__pycache__ /data/scratch/pysages . &> /dev/null
find pysages -type f \( -name "*.py" -name "*.sh" \) -exec sed -i "s|/data/scratch|$HOME|g" {} +
. pysages/modules.sh
python -m pip -q install ParmEd
python -m pip -q install netCDF4