Pau Carrió pauca

## replaceSymLinks.sh
# loop over symbolik links in current directory
for f in `find . -maxdepth 1 -type l ` ; do
    # get symlink destination
    g=` readlink $f `
    # move original to directory
    cp -f $g .
    # clean
    if [ $? == 0 ]; then
        rm -f $g
        rm -f $f

## RqcScript.R
library(Rqc)
fs <- "corrupted.fastq"
qa <- rqcQA(fs,sample=F)
sessionInfo()

## examplePasteAndShow.html
<!doctype html>
<html>
<head>
    <meta charset="utf-8">
    <title>Paste&Go</title>
    <script src="https://code.jquery.com/jquery-3.1.1.min.js" ></script>
    <script>

$( document ).ready(function() {
    console.log( "ready!" );

## andVsAndAnd.scala


def f1 = {
    println("f1")
    true
}

def f2 = {
    println("f2")

## R_chem_snippets.R

# CAS -> smiles with CACTUS server
sapply(cas, function(id){
  require(RCurl)
  return(getURL(paste("http://cactus.nci.nih.gov/chemical/structure/",id,"/smiles",sep="")))
})
	# loop over symbolik links in current directory
	for f in `find . -maxdepth 1 -type l ` ; do
	# get symlink destination
	g=` readlink $f `
	# move original to directory
	cp -f $g .
	# clean
	if [ $? == 0 ]; then
	rm -f $g
	rm -f $f
	library(Rqc)
	fs <- "corrupted.fastq"
	qa <- rqcQA(fs,sample=F)
	sessionInfo()
	<!doctype html>
	<html>
	<head>
	<meta charset="utf-8">
	<title>Paste&Go</title>
	<script src="https://code.jquery.com/jquery-3.1.1.min.js" ></script>
	<script>

	$( document ).ready(function() {
	console.log( "ready!" );

	# CAS -> smiles with CACTUS server
	sapply(cas, function(id){
	require(RCurl)
	return(getURL(paste("http://cactus.nci.nih.gov/chemical/structure/",id,"/smiles",sep="")))
	})