Ryan Lang rlang81
rlang81
/ rewrite_harmonyV6_index_file.py
Created
November 16, 2023 22:32
Function to rewrite index files generated by PE Harmony V6 to be compatible with https://github.com/broadinstitute/pe2loaddata
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| import os | |
| import xml.etree.ElementTree as ET | |
| def rewrite_harmonyV6_index_file(index_path): | |
| """Fix Harmony V6 index file to be compatible with pe2loaddata | |
| Warning: This will rewrite the index file in place! | |
| Dependencies: os, xml.etree.ElementTree as ET | |
| Parameters | |
| ---------- |