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rsignell-usgs/fsspec_gui.ipynb

Last active November 24, 2023 15:03
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fsspec_gui.ipynb
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fsspec_gui.ipynb
{
"cells": [
{
"cell_type": "markdown",
"id": "8a0d80f1-460b-4abd-bd2b-c1d3dc34c321",
"metadata": {
"tags": []
},
"source": [
"# Using the fsspec GUI to browse a bucket"
]
},
{
"cell_type": "code",
"execution_count": 1,
"id": "443e99ff-a28f-421a-ba88-31dad8a37651",
"metadata": {
"tags": []
},
"outputs": [
{
"data": {
"text/plain": [
"['noaa-goes18/ABI-L1b-RadC',\n",
" 'noaa-goes18/ABI-L1b-RadF',\n",
" 'noaa-goes18/ABI-L1b-RadM',\n",
" 'noaa-goes18/ABI-L2-ACHA2KMC',\n",
" 'noaa-goes18/ABI-L2-ACHA2KMF']"
]
},
"execution_count": 1,
"metadata": {},
"output_type": "execute_result"
}
],
"source": [
"import fsspec\n",
"\n",
"fs = fsspec.filesystem('s3', anon=True)\n",
"url = 's3://noaa-goes18/'\n",
"\n",
"fs.ls(url)[0:5]"
]
},
{
"cell_type": "code",
"execution_count": 2,
"id": "8b0c04dc-1571-48a7-9849-0a0ef7659cbc",
"metadata": {},
"outputs": [
{
"data": {
"application/javascript": [
"(function(root) {\n",
" function now() {\n",
" return new Date();\n",
" }\n",
"\n",
" var force = true;\n",
" var py_version = '3.3.0'.replace('rc', '-rc.').replace('.dev', '-dev.');\n",
" var is_dev = py_version.indexOf(\"+\") !== -1 || py_version.indexOf(\"-\") !== -1;\n",
" var reloading = false;\n",
" var Bokeh = root.Bokeh;\n",
" var bokeh_loaded = Bokeh != null && (Bokeh.version === py_version || (Bokeh.versions !== undefined && Bokeh.versions.has(py_version)));\n",
"\n",
" if (typeof (root._bokeh_timeout) === \"undefined\" || force) {\n",
" root._bokeh_timeout = Date.now() + 5000;\n",
" root._bokeh_failed_load = false;\n",
" }\n",
"\n",
" function run_callbacks() {\n",
" try {\n",
" root._bokeh_onload_callbacks.forEach(function(callback) {\n",
" if (callback != null)\n",
" callback();\n",
" });\n",
" } finally {\n",
" delete root._bokeh_onload_callbacks;\n",
" }\n",
" console.debug(\"Bokeh: all callbacks have finished\");\n",
" }\n",
"\n",
" function load_libs(css_urls, js_urls, js_modules, js_exports, callback) {\n",
" if (css_urls == null) css_urls = [];\n",
" if (js_urls == null) js_urls = [];\n",
" if (js_modules == null) js_modules = [];\n",
" if (js_exports == null) js_exports = {};\n",
"\n",
" root._bokeh_onload_callbacks.push(callback);\n",
"\n",
" if (root._bokeh_is_loading > 0) {\n",
" console.debug(\"Bokeh: BokehJS is being loaded, scheduling callback at\", now());\n",
" return null;\n",
" }\n",
" if (js_urls.length === 0 && js_modules.length === 0 && Object.keys(js_exports).length === 0) {\n",
" run_callbacks();\n",
" return null;\n",
" }\n",
" if (!reloading) {\n",
" console.debug(\"Bokeh: BokehJS not loaded, scheduling load and callback at\", now());\n",
" }\n",
"\n",
" function on_load() {\n",
" root._bokeh_is_loading--;\n",
" if (root._bokeh_is_loading === 0) {\n",
" console.debug(\"Bokeh: all BokehJS libraries/stylesheets loaded\");\n",
" run_callbacks()\n",
" }\n",
" }\n",
" window._bokeh_on_load = on_load\n",
"\n",
" function on_error() {\n",
" console.error(\"failed to load \" + url);\n",
" }\n",
"\n",
" var skip = [];\n",
" if (window.requirejs) {\n",
" window.requirejs.config({'packages': {}, 'paths': {'jspanel': 'https://cdn.jsdelivr.net/npm/jspanel4@4.12.0/dist/jspanel', 'jspanel-modal': 'https://cdn.jsdelivr.net/npm/jspanel4@4.12.0/dist/extensions/modal/jspanel.modal', 'jspanel-tooltip': 'https://cdn.jsdelivr.net/npm/jspanel4@4.12.0/dist/extensions/tooltip/jspanel.tooltip', 'jspanel-hint': 'https://cdn.jsdelivr.net/npm/jspanel4@4.12.0/dist/extensions/hint/jspanel.hint', 'jspanel-layout': 'https://cdn.jsdelivr.net/npm/jspanel4@4.12.0/dist/extensions/layout/jspanel.layout', 'jspanel-contextmenu': 'https://cdn.jsdelivr.net/npm/jspanel4@4.12.0/dist/extensions/contextmenu/jspanel.contextmenu', 'jspanel-dock': 'https://cdn.jsdelivr.net/npm/jspanel4@4.12.0/dist/extensions/dock/jspanel.dock', 'gridstack': 'https://cdn.jsdelivr.net/npm/gridstack@7.2.3/dist/gridstack-all', 'notyf': 'https://cdn.jsdelivr.net/npm/notyf@3/notyf.min'}, 'shim': {'jspanel': {'exports': 'jsPanel'}, 'gridstack': {'exports': 'GridStack'}}});\n",
" require([\"jspanel\"], function(jsPanel) {\n",
"\twindow.jsPanel = jsPanel\n",
"\ton_load()\n",
" })\n",
" require([\"jspanel-modal\"], function() {\n",
"\ton_load()\n",
" })\n",
" require([\"jspanel-tooltip\"], function() {\n",
"\ton_load()\n",
" })\n",
" require([\"jspanel-hint\"], function() {\n",
"\ton_load()\n",
" })\n",
" require([\"jspanel-layout\"], function() {\n",
"\ton_load()\n",
" })\n",
" require([\"jspanel-contextmenu\"], function() {\n",
"\ton_load()\n",
" })\n",
" require([\"jspanel-dock\"], function() {\n",
"\ton_load()\n",
" })\n",
" require([\"gridstack\"], function(GridStack) {\n",
"\twindow.GridStack = GridStack\n",
"\ton_load()\n",
" })\n",
" require([\"notyf\"], function() {\n",
"\ton_load()\n",
" })\n",
" root._bokeh_is_loading = css_urls.length + 9;\n",
" } else {\n",
" root._bokeh_is_loading = css_urls.length + js_urls.length + js_modules.length + Object.keys(js_exports).length;\n",
" }\n",
"\n",
" var existing_stylesheets = []\n",
" var links = document.getElementsByTagName('link')\n",
" for (var i = 0; i < links.length; i++) {\n",
" var link = links[i]\n",
" if (link.href != null) {\n",
"\texisting_stylesheets.push(link.href)\n",
" }\n",
" }\n",
" for (var i = 0; i < css_urls.length; i++) {\n",
" var url = css_urls[i];\n",
" if (existing_stylesheets.indexOf(url) !== -1) {\n",
"\ton_load()\n",
"\tcontinue;\n",
" }\n",
" const element = document.createElement(\"link\");\n",
" element.onload = on_load;\n",
" element.onerror = on_error;\n",
" element.rel = \"stylesheet\";\n",
" element.type = \"text/css\";\n",
" element.href = url;\n",
" console.debug(\"Bokeh: injecting link tag for BokehJS stylesheet: \", url);\n",
" document.body.appendChild(element);\n",
" } if (((window['jsPanel'] !== undefined) && (!(window['jsPanel'] instanceof HTMLElement))) || window.requirejs) {\n",
" var urls = ['https://cdn.holoviz.org/panel/1.3.1/dist/bundled/floatpanel/jspanel4@4.12.0/dist/jspanel.js', 'https://cdn.holoviz.org/panel/1.3.1/dist/bundled/floatpanel/jspanel4@4.12.0/dist/extensions/modal/jspanel.modal.js', 'https://cdn.holoviz.org/panel/1.3.1/dist/bundled/floatpanel/jspanel4@4.12.0/dist/extensions/tooltip/jspanel.tooltip.js', 'https://cdn.holoviz.org/panel/1.3.1/dist/bundled/floatpanel/jspanel4@4.12.0/dist/extensions/hint/jspanel.hint.js', 'https://cdn.holoviz.org/panel/1.3.1/dist/bundled/floatpanel/jspanel4@4.12.0/dist/extensions/layout/jspanel.layout.js', 'https://cdn.holoviz.org/panel/1.3.1/dist/bundled/floatpanel/jspanel4@4.12.0/dist/extensions/contextmenu/jspanel.contextmenu.js', 'https://cdn.holoviz.org/panel/1.3.1/dist/bundled/floatpanel/jspanel4@4.12.0/dist/extensions/dock/jspanel.dock.js'];\n",
" for (var i = 0; i < urls.length; i++) {\n",
" skip.push(urls[i])\n",
" }\n",
" } if (((window['GridStack'] !== undefined) && (!(window['GridStack'] instanceof HTMLElement))) || window.requirejs) {\n",
" var urls = ['https://cdn.holoviz.org/panel/1.3.1/dist/bundled/gridstack/gridstack@7.2.3/dist/gridstack-all.js'];\n",
" for (var i = 0; i < urls.length; i++) {\n",
" skip.push(urls[i])\n",
" }\n",
" } if (((window['Notyf'] !== undefined) && (!(window['Notyf'] instanceof HTMLElement))) || window.requirejs) {\n",
" var urls = ['https://cdn.holoviz.org/panel/1.3.1/dist/bundled/notificationarea/notyf@3/notyf.min.js'];\n",
" for (var i = 0; i < urls.length; i++) {\n",
" skip.push(urls[i])\n",
" }\n",
" } var existing_scripts = []\n",
" var scripts = document.getElementsByTagName('script')\n",
" for (var i = 0; i < scripts.length; i++) {\n",
" var script = scripts[i]\n",
" if (script.src != null) {\n",
"\texisting_scripts.push(script.src)\n",
" }\n",
" }\n",
" for (var i = 0; i < js_urls.length; i++) {\n",
" var url = js_urls[i];\n",
" if (skip.indexOf(url) !== -1 || existing_scripts.indexOf(url) !== -1) {\n",
"\tif (!window.requirejs) {\n",
"\t on_load();\n",
"\t}\n",
"\tcontinue;\n",
" }\n",
" var element = document.createElement('script');\n",
" element.onload = on_load;\n",
" element.onerror = on_error;\n",
" element.async = false;\n",
" element.src = url;\n",
" console.debug(\"Bokeh: injecting script tag for BokehJS library: \", url);\n",
" document.head.appendChild(element);\n",
" }\n",
" for (var i = 0; i < js_modules.length; i++) {\n",
" var url = js_modules[i];\n",
" if (skip.indexOf(url) !== -1 || existing_scripts.indexOf(url) !== -1) {\n",
"\tif (!window.requirejs) {\n",
"\t on_load();\n",
"\t}\n",
"\tcontinue;\n",
" }\n",
" var element = document.createElement('script');\n",
" element.onload = on_load;\n",
" element.onerror = on_error;\n",
" element.async = false;\n",
" element.src = url;\n",
" element.type = \"module\";\n",
" console.debug(\"Bokeh: injecting script tag for BokehJS library: \", url);\n",
" document.head.appendChild(element);\n",
" }\n",
" for (const name in js_exports) {\n",
" var url = js_exports[name];\n",
" if (skip.indexOf(url) >= 0 || root[name] != null) {\n",
"\tif (!window.requirejs) {\n",
"\t on_load();\n",
"\t}\n",
"\tcontinue;\n",
" }\n",
" var element = document.createElement('script');\n",
" element.onerror = on_error;\n",
" element.async = false;\n",
" element.type = \"module\";\n",
" console.debug(\"Bokeh: injecting script tag for BokehJS library: \", url);\n",
" element.textContent = `\n",
" import ${name} from \"${url}\"\n",
" window.${name} = ${name}\n",
" window._bokeh_on_load()\n",
" `\n",
" document.head.appendChild(element);\n",
" }\n",
" if (!js_urls.length && !js_modules.length) {\n",
" on_load()\n",
" }\n",
" };\n",
"\n",
" function inject_raw_css(css) {\n",
" const element = document.createElement(\"style\");\n",
" element.appendChild(document.createTextNode(css));\n",
" document.body.appendChild(element);\n",
" }\n",
"\n",
" var js_urls = [\"https://cdn.bokeh.org/bokeh/release/bokeh-3.3.0.min.js\", \"https://cdn.bokeh.org/bokeh/release/bokeh-gl-3.3.0.min.js\", \"https://cdn.bokeh.org/bokeh/release/bokeh-widgets-3.3.0.min.js\", \"https://cdn.bokeh.org/bokeh/release/bokeh-tables-3.3.0.min.js\", \"https://cdn.holoviz.org/panel/1.3.1/dist/panel.min.js\"];\n",
" var js_modules = [];\n",
" var js_exports = {};\n",
" var css_urls = [];\n",
" var inline_js = [ function(Bokeh) {\n",
" Bokeh.set_log_level(\"info\");\n",
" },\n",
"function(Bokeh) {} // ensure no trailing comma for IE\n",
" ];\n",
"\n",
" function run_inline_js() {\n",
" if ((root.Bokeh !== undefined) || (force === true)) {\n",
" for (var i = 0; i < inline_js.length; i++) {\n",
" inline_js[i].call(root, root.Bokeh);\n",
" }\n",
" // Cache old bokeh versions\n",
" if (Bokeh != undefined && !reloading) {\n",
"\tvar NewBokeh = root.Bokeh;\n",
"\tif (Bokeh.versions === undefined) {\n",
"\t Bokeh.versions = new Map();\n",
"\t}\n",
"\tif (NewBokeh.version !== Bokeh.version) {\n",
"\t Bokeh.versions.set(NewBokeh.version, NewBokeh)\n",
"\t}\n",
"\troot.Bokeh = Bokeh;\n",
" }} else if (Date.now() < root._bokeh_timeout) {\n",
" setTimeout(run_inline_js, 100);\n",
" } else if (!root._bokeh_failed_load) {\n",
" console.log(\"Bokeh: BokehJS failed to load within specified timeout.\");\n",
" root._bokeh_failed_load = true;\n",
" }\n",
" root._bokeh_is_initializing = false\n",
" }\n",
"\n",
" function load_or_wait() {\n",
" // Implement a backoff loop that tries to ensure we do not load multiple\n",
" // versions of Bokeh and its dependencies at the same time.\n",
" // In recent versions we use the root._bokeh_is_initializing flag\n",
" // to determine whether there is an ongoing attempt to initialize\n",
" // bokeh, however for backward compatibility we also try to ensure\n",
" // that we do not start loading a newer (Panel>=1.0 and Bokeh>3) version\n",
" // before older versions are fully initialized.\n",
" if (root._bokeh_is_initializing && Date.now() > root._bokeh_timeout) {\n",
" root._bokeh_is_initializing = false;\n",
" root._bokeh_onload_callbacks = undefined;\n",
" console.log(\"Bokeh: BokehJS was loaded multiple times but one version failed to initialize.\");\n",
" load_or_wait();\n",
" } else if (root._bokeh_is_initializing || (typeof root._bokeh_is_initializing === \"undefined\" && root._bokeh_onload_callbacks !== undefined)) {\n",
" setTimeout(load_or_wait, 100);\n",
" } else {\n",
" Bokeh = root.Bokeh;\n",
" bokeh_loaded = Bokeh != null && (Bokeh.version === py_version || (Bokeh.versions !== undefined && Bokeh.versions.has(py_version)));\n",
" root._bokeh_is_initializing = true\n",
" root._bokeh_onload_callbacks = []\n",
" if (!reloading && (!bokeh_loaded || is_dev)) {\n",
"\troot.Bokeh = undefined;\n",
" }\n",
" load_libs(css_urls, js_urls, js_modules, js_exports, function() {\n",
"\tconsole.debug(\"Bokeh: BokehJS plotting callback run at\", now());\n",
"\trun_inline_js();\n",
" });\n",
" }\n",
" }\n",
" // Give older versions of the autoload script a head-start to ensure\n",
" // they initialize before we start loading newer version.\n",
" setTimeout(load_or_wait, 100)\n",
"}(window));"
],
"application/vnd.holoviews_load.v0+json": "(function(root) {\n function now() {\n return new Date();\n }\n\n var force = true;\n var py_version = '3.3.0'.replace('rc', '-rc.').replace('.dev', '-dev.');\n var is_dev = py_version.indexOf(\"+\") !== -1 || py_version.indexOf(\"-\") !== -1;\n var reloading = false;\n var Bokeh = root.Bokeh;\n var bokeh_loaded = Bokeh != null && (Bokeh.version === py_version || (Bokeh.versions !== undefined && Bokeh.versions.has(py_version)));\n\n if (typeof (root._bokeh_timeout) === \"undefined\" || force) {\n root._bokeh_timeout = Date.now() + 5000;\n root._bokeh_failed_load = false;\n }\n\n function run_callbacks() {\n try {\n root._bokeh_onload_callbacks.forEach(function(callback) {\n if (callback != null)\n callback();\n });\n } finally {\n delete root._bokeh_onload_callbacks;\n }\n console.debug(\"Bokeh: all callbacks have finished\");\n }\n\n function load_libs(css_urls, js_urls, js_modules, js_exports, callback) {\n if (css_urls == null) css_urls = [];\n if (js_urls == null) js_urls = [];\n if (js_modules == null) js_modules = [];\n if (js_exports == null) js_exports = {};\n\n root._bokeh_onload_callbacks.push(callback);\n\n if (root._bokeh_is_loading > 0) {\n console.debug(\"Bokeh: BokehJS is being loaded, scheduling callback at\", now());\n return null;\n }\n if (js_urls.length === 0 && js_modules.length === 0 && Object.keys(js_exports).length === 0) {\n run_callbacks();\n return null;\n }\n if (!reloading) {\n console.debug(\"Bokeh: BokehJS not loaded, scheduling load and callback at\", now());\n }\n\n function on_load() {\n root._bokeh_is_loading--;\n if (root._bokeh_is_loading === 0) {\n console.debug(\"Bokeh: all BokehJS libraries/stylesheets loaded\");\n run_callbacks()\n }\n }\n window._bokeh_on_load = on_load\n\n function on_error() {\n console.error(\"failed to load \" + url);\n }\n\n var skip = [];\n if (window.requirejs) {\n window.requirejs.config({'packages': {}, 'paths': {'jspanel': 'https://cdn.jsdelivr.net/npm/jspanel4@4.12.0/dist/jspanel', 'jspanel-modal': 'https://cdn.jsdelivr.net/npm/jspanel4@4.12.0/dist/extensions/modal/jspanel.modal', 'jspanel-tooltip': 'https://cdn.jsdelivr.net/npm/jspanel4@4.12.0/dist/extensions/tooltip/jspanel.tooltip', 'jspanel-hint': 'https://cdn.jsdelivr.net/npm/jspanel4@4.12.0/dist/extensions/hint/jspanel.hint', 'jspanel-layout': 'https://cdn.jsdelivr.net/npm/jspanel4@4.12.0/dist/extensions/layout/jspanel.layout', 'jspanel-contextmenu': 'https://cdn.jsdelivr.net/npm/jspanel4@4.12.0/dist/extensions/contextmenu/jspanel.contextmenu', 'jspanel-dock': 'https://cdn.jsdelivr.net/npm/jspanel4@4.12.0/dist/extensions/dock/jspanel.dock', 'gridstack': 'https://cdn.jsdelivr.net/npm/gridstack@7.2.3/dist/gridstack-all', 'notyf': 'https://cdn.jsdelivr.net/npm/notyf@3/notyf.min'}, 'shim': {'jspanel': {'exports': 'jsPanel'}, 'gridstack': {'exports': 'GridStack'}}});\n require([\"jspanel\"], function(jsPanel) {\n\twindow.jsPanel = jsPanel\n\ton_load()\n })\n require([\"jspanel-modal\"], function() {\n\ton_load()\n })\n require([\"jspanel-tooltip\"], function() {\n\ton_load()\n })\n require([\"jspanel-hint\"], function() {\n\ton_load()\n })\n require([\"jspanel-layout\"], function() {\n\ton_load()\n })\n require([\"jspanel-contextmenu\"], function() {\n\ton_load()\n })\n require([\"jspanel-dock\"], function() {\n\ton_load()\n })\n require([\"gridstack\"], function(GridStack) {\n\twindow.GridStack = GridStack\n\ton_load()\n })\n require([\"notyf\"], function() {\n\ton_load()\n })\n root._bokeh_is_loading = css_urls.length + 9;\n } else {\n root._bokeh_is_loading = css_urls.length + js_urls.length + js_modules.length + Object.keys(js_exports).length;\n }\n\n var existing_stylesheets = []\n var links = document.getElementsByTagName('link')\n for (var i = 0; i < links.length; i++) {\n var link = links[i]\n if (link.href != null) {\n\texisting_stylesheets.push(link.href)\n }\n }\n for (var i = 0; i < css_urls.length; i++) {\n var url = css_urls[i];\n if (existing_stylesheets.indexOf(url) !== -1) {\n\ton_load()\n\tcontinue;\n }\n const element = document.createElement(\"link\");\n element.onload = on_load;\n element.onerror = on_error;\n element.rel = \"stylesheet\";\n element.type = \"text/css\";\n element.href = url;\n console.debug(\"Bokeh: injecting link tag for BokehJS stylesheet: \", url);\n document.body.appendChild(element);\n } if (((window['jsPanel'] !== undefined) && (!(window['jsPanel'] instanceof HTMLElement))) || window.requirejs) {\n var urls = ['https://cdn.holoviz.org/panel/1.3.1/dist/bundled/floatpanel/jspanel4@4.12.0/dist/jspanel.js', 'https://cdn.holoviz.org/panel/1.3.1/dist/bundled/floatpanel/jspanel4@4.12.0/dist/extensions/modal/jspanel.modal.js', 'https://cdn.holoviz.org/panel/1.3.1/dist/bundled/floatpanel/jspanel4@4.12.0/dist/extensions/tooltip/jspanel.tooltip.js', 'https://cdn.holoviz.org/panel/1.3.1/dist/bundled/floatpanel/jspanel4@4.12.0/dist/extensions/hint/jspanel.hint.js', 'https://cdn.holoviz.org/panel/1.3.1/dist/bundled/floatpanel/jspanel4@4.12.0/dist/extensions/layout/jspanel.layout.js', 'https://cdn.holoviz.org/panel/1.3.1/dist/bundled/floatpanel/jspanel4@4.12.0/dist/extensions/contextmenu/jspanel.contextmenu.js', 'https://cdn.holoviz.org/panel/1.3.1/dist/bundled/floatpanel/jspanel4@4.12.0/dist/extensions/dock/jspanel.dock.js'];\n for (var i = 0; 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]
},
{
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"execution_count": 3,
"id": "c2a1d5b2-9db7-4814-8137-91f8c05e07eb",
"metadata": {
"tags": []
},
"outputs": [
{
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" Bokeh.embed.embed_items_notebook(docs_json, render_items);\n",
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" return null\n",
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" function is_loaded(root) {\n",
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" clearInterval(timer);\n",
"\t var Bokeh = get_bokeh(root)\n",
"\t if (Bokeh == null || Bokeh.Panel == null) {\n",
" console.warn(\"Panel: ERROR: Unable to run Panel code because Bokeh or Panel library is missing\");\n",
"\t } else {\n",
"\t console.warn(\"Panel: WARNING: Attempting to render but not all required libraries could be resolved.\")\n",
"\t embed_document(root)\n",
"\t }\n",
" }\n",
" }\n",
" }, 25, root)\n",
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"})(window);</script>"
],
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},
"execution_count": 3,
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}
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