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[INFO] 2015-01-05 10:10:36,202 [root main 269] Starting smrtpipe.py : v1.87.139483 | |
[INFO] 2015-01-05 10:10:36,203 [root main 270] Using Python : v2.7.3 | |
[INFO] 2015-01-05 10:10:36,214 [root main 271] Platform info Linux-3.5.0-45-generic-x86_64-with-Ubuntu-12.04-precise | |
[INFO] 2015-01-05 10:10:36,215 [root main 272] Running on mamba.ornl.gov | |
[INFO] 2015-01-05 10:10:36,215 [root main 273] Process id 15016 | |
[INFO] 2015-01-05 10:10:36,216 [SMRTpipe.pbpy.io.SecondaryConfig _loadFromFile 25] Loading SecondaryConfig from /data2/smart/smrtanalysis/install/smrtanalysis_2.3.0.140936/etc/config.xml | |
[INFO] 2015-01-05 10:10:36,217 [SMRTpipe.SmrtPipeConfig __autoLoad 113] Loading configuration from /data2/smart/smrtanalysis/install/smrtanalysis_2.3.0.140936/analysis/etc/smrtpipe.rc | |
[INFO] 2015-01-05 10:10:36,219 [SMRTpipe.SmrtPipeConfig __setAlgorithmParametersPath 212] ALGO_PARAMS key not found in smrtpipe.rc - using latest bundle: /data2/smart/smrtanalysis/install/smrtanalysis_2.3.0.140936/analysis/etc/algorithm_parameters |