Saket Choudhary saketkc

## tmux-cheatsheet.markdown

      
              1 file
            
          
              3254 forks
            
          
              181 comments
            
          
              14310 stars
            
          
                MohamedAlaa
                / tmux-cheatsheet.markdown
            
            
              Last active
              May 13, 2024 22:10
            
              
                tmux shortcuts & cheatsheet
              
          
    tmux shortcuts & cheatsheet

start new:
tmux

start new with session name:
tmux new -s myname


## one-channel-agilent.R
library(limma)

GROUP="62976"
# targets.txt has columns of "FileName" and "Condition" e.g.
"""
FileName    Condition
data/scrubbed/LT001098RU_COPD.45015.txt COPD
data/scrubbed/LT001600RL_ILD.45015.txt  ILD
data/scrubbed/LT003990RU_CTRL.45015.txt CTRL
data/scrubbed/LT004173LL_ILD.45015.txt  ILD

## TEST.rb
a=[]
while STDIN.readline.chomp!="42"
	a.push($_)
end
a.each  { |s| puts s }

## get_protein.py
import sys
import time
from Bio import Entrez

Entrez.email = "your.email@domain.tld"
if not Entrez.email:
    print "you must add your email address"
    sys.exit(2)

# create an empty list we will fill with the gene names
	library(limma)

	GROUP="62976"
	# targets.txt has columns of "FileName" and "Condition" e.g.
	"""
	FileName Condition
	data/scrubbed/LT001098RU_COPD.45015.txt COPD
	data/scrubbed/LT001600RL_ILD.45015.txt ILD
	data/scrubbed/LT003990RU_CTRL.45015.txt CTRL
	data/scrubbed/LT004173LL_ILD.45015.txt ILD
	a=[]
	while STDIN.readline.chomp!="42"
	a.push($_)
	end
	a.each { \|s\| puts s }
	import sys
	import time
	from Bio import Entrez

	Entrez.email = "your.email@domain.tld"
	if not Entrez.email:
	print "you must add your email address"
	sys.exit(2)

	# create an empty list we will fill with the gene names