- Ubuntu Server 16.04.4 LTS AMD64
- Disk Size: 80GiB
- Number of Disks: 2
- LVM: YES
- RAID: RAID1
- Partition Table Format: MBR
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#!/usr/bin/env perl | |
# | |
# convert cufflinks GTF into a Augustus hintfile | |
# | |
# seq source ep|exon|intron start stop score +/- phase grp=ID; src=E | |
my %transcripts; | |
while(<>){ | |
next unless /Cufflinks\s+exon.*transcript_id/; |
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(* | |
* New-iTerm-Window.scpt | |
* | |
* Intended for use with QuickSilver | |
* I mapped option-y to running this script to create | |
* a new iTerm window on the current workspace | |
* | |
* Based on much Googling - very little "original" code here | |
* Comments/Suggestions to brad.lhotsky@gmail.com | |
*) |
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# This puts all files in one partition. You'll need to change proxy settings | |
# (USERNAME, PASSWORD, PROXYSERVER) and crypted passwords, as well as the | |
# get_domain string to your dns domain. | |
# This is not quite fully automatic. It will prompt you for hostname. If you | |
# want to automatically fill in the hostname you'll need to provide it in the | |
# kernel APPEND line by saying netcfg/get_hostname=hostname | |
# If you've never setup preseeding, the first step is going to be getting PXE | |
# netinstall working. You don't need a full CD, you just need netboot/debian-installer/amd64/linux |
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#!/usr/bin/python | |
# setup: pip install requests beautifulsoup4 | |
from decimal import Decimal | |
import requests | |
from bs4 import BeautifulSoup | |
import sys | |
import getpass |
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#!/bin/sh | |
remove_dangling() { | |
echo "Removing dangling images ..." | |
docker rmi $(docker images -f dangling=true -q) | |
} | |
remove_stopped_containers() { | |
echo "Removing stopped containers ..." | |
docker rm $(docker ps -qa) |
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#!/bin/sh | |
# create a custom mapping | |
cat > /tmp/mapping.json << MAPPING | |
{ | |
"types": { | |
"_default": { | |
"properties": { | |
"location": { | |
"properties": { |
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--[[ json.lua | |
A compact pure-Lua JSON library. | |
The main functions are: json.stringify, json.parse. | |
## json.stringify: | |
This expects the following to be true of any tables being encoded: | |
* They only have string or number keys. Number keys must be represented as | |
strings in json; this is part of the json spec. |
Custom recipe to get OS X 10.10 Yosemite running from scratch, setup applications and developer environment. I use this gist to keep track of the important software and steps required to have a functioning system after a semi-annual fresh install. On average, I reinstall each computer from scratch every 6 months, and I do not perform upgrades between distros.
This keeps the system performing at top speeds, clean of trojans, spyware, and ensures that I maintain good organizational practices for my content and backups. I highly recommend this.
You are encouraged to fork this and modify it to your heart's content to match your own needs.
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# Moved to https://github.com/oxplot/gists/blob/master/ether-waker.sh |
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