satta

rm = gt.region_mapping_new_seqfile_matchdescstart(arg[2])

cv = gt.custom_visitor_new()
function cv:visit_feature(fn)
  if fn:get_type() == "gene" then
    print(fn:extract_sequence("gene", false, rm):len())
  end
end

gs = gt.gff3_in_stream_new_sorted(arg[1])

satta

### Keybase proof

I hereby claim:

  * I am satta on github.
  * I am satta (https://keybase.io/satta) on keybase.
  * I have a public key whose fingerprint is 0EED 77DC 41D7 60FD E440  35FF 5556 A34E 04A3 610B

To claim this, I am signing this object:

satta

[satta@renard:~] ◇ grep -A2 failed testout-ppc.txt
 90: gt hcr reads                                                : failed
     [ problem: unexpected return code: 2 != 0
       in: /root/genometools/testsuite/stest_testsuite/test90 ]
 91: gt hcr reads allfiles                                       : failed
     [ problem: unexpected return code: 2 != 0
       in: /root/genometools/testsuite/stest_testsuite/test91 ]
 92: gt hcr reads and description                                : failed
     [ problem: unexpected return code: 2 != 0
       in: /root/genometools/testsuite/stest_testsuite/test92 ]