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import argparse
import boto3


class ClusterDestroyer:
    """Destroy all ParallelCluster clusters in a given region."""

    def __init__(self, region, dryrun):
        self.__created_clusters = []
        self.region = region

sean-smith

COVID-19 AWS HPC Cluster

User Setup

To deploy, click:

Region	Stack
us-east-1	[](https://us-east-1.console.aws.amazon.com/cloudformation/home?region=us-east-1#/stacks/create/template?stackName=AWS-HPC-Quickstart&templateURL=https://covid19hpc-quickstart.s3.amazonaws.com/cf

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AWS ParallelCluster Specific AZ Deployment

To use AWS ParallelCluster in a specific Availibility Zone, do the following:

1. In the VPC Dashboard , click "VPC Wizard"

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General

	sge	slurm	torque
Submit Interactive Job	qlogin	srun	qsub -I
Submit Batch Job	qsub	sbatch	qsub
Number of Slots	-pe mpi [n]	-n [n]	-l ppn=[n]
Number of Nodes	-pe mpi [slots * n]	-N [n]	-l nodes=[n]
Cancel Job	qdel	scancel	qdel
See Queue	qstat	squeue	qstat

sean-smith

Install Intel Parallel Studio Runtime on AWS ParallelCluster

Tested on Amazon Linux 2

On all AWS ParallelCluster clusters /opt/intel is already shared out via NFS:

$ showmount -e
Export list for ip-172-31-41-183:

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Create a Cluster with Spack Binary Cache

package	install command	working?
openfoam	spack install --no-check-signature --cache-only openfoam	✅
gromacs	spack install --no-check-signature --cache-only gromacs	✅
ior	spack install --no-check-signature --cache-only ior	✅
osu-micro-benchmarks	spack install --no-check-signature --cache-only osu-micro-benchmarks	✅

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Intel Select Solution Cluster Setup

1. Create a cluster using the following config, the keypair, VPC, subnet and region are automatically picked off your Cloud9 instance.

If you're not using Cloud9, subsitute the variables ${VPC_ID}, ${SUBNET_ID}, ${REGION} and make a keypair (or use your own called intel-cluster

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Setup an iPython Notebook on AWS with LetsEncrypt Certificate

The first step is to setup an EC2 Ubuntu 16.04 instance that you can ssh into. I won't go into detail here but you should be able to easily google it.

You can get free AWS credit here https://education.github.com/pack

A better guide w/ pictures is here: https://chrisalbon.com/jupyter/run_project_jupyter_on_amazon_ec2.html (Note this doesn't include LetsEncrypt, so it only has self signed certificates)

Once you've setup an instance and ssh'd in, do the following:

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Setup LS-Dyna on SOCA 2.6.1

Part 1: LS-Dyna Installation

1. First download the correct binary,

You can download the LS-Dyna binaries here (password protected): https://ftp.lstc.com/user/mpp-dyna/

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Intel Select Solution Setup

AWS ParallelCluster Config:

Region	Launch
North Virginia (us-east-1)	[](https://us-east-1.console.aws.amazon.com/cloudformation/home?region=us-east-1#/stacks/create/review?stackName=Intel-HPC-Quickstart&templateURL=https://notearshpc-quickstart.s3