Created
July 17, 2020 20:25
-
-
Save simonw/bca9f55391607056dc75ea77b6124be1 to your computer and use it in GitHub Desktop.
Using Datasette with Pandas
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
{ | |
"cells": [ | |
{ | |
"cell_type": "markdown", | |
"metadata": {}, | |
"source": [ | |
"# Datasette and Pandas" | |
] | |
}, | |
{ | |
"cell_type": "code", | |
"execution_count": 1, | |
"metadata": {}, | |
"outputs": [], | |
"source": [ | |
"url = \"https://covid-19.datasettes.com/covid/latest_ny_times_counties_with_populations.csv?_stream=on&_size=max\"" | |
] | |
}, | |
{ | |
"cell_type": "code", | |
"execution_count": 4, | |
"metadata": {}, | |
"outputs": [], | |
"source": [ | |
"import pandas" | |
] | |
}, | |
{ | |
"cell_type": "code", | |
"execution_count": 6, | |
"metadata": {}, | |
"outputs": [ | |
{ | |
"data": { | |
"text/html": [ | |
"<div>\n", | |
"<style scoped>\n", | |
" .dataframe tbody tr th:only-of-type {\n", | |
" vertical-align: middle;\n", | |
" }\n", | |
"\n", | |
" .dataframe tbody tr th {\n", | |
" vertical-align: top;\n", | |
" }\n", | |
"\n", | |
" .dataframe thead th {\n", | |
" text-align: right;\n", | |
" }\n", | |
"</style>\n", | |
"<table border=\"1\" class=\"dataframe\">\n", | |
" <thead>\n", | |
" <tr style=\"text-align: right;\">\n", | |
" <th></th>\n", | |
" <th>date</th>\n", | |
" <th>county</th>\n", | |
" <th>state</th>\n", | |
" <th>fips</th>\n", | |
" <th>cases</th>\n", | |
" <th>deaths</th>\n", | |
" <th>population</th>\n", | |
" <th>deaths_per_million</th>\n", | |
" <th>cases_per_million</th>\n", | |
" </tr>\n", | |
" </thead>\n", | |
" <tbody>\n", | |
" <tr>\n", | |
" <th>0</th>\n", | |
" <td>2020-07-16</td>\n", | |
" <td>Trousdale</td>\n", | |
" <td>Tennessee</td>\n", | |
" <td>47169</td>\n", | |
" <td>1528</td>\n", | |
" <td>6</td>\n", | |
" <td>11284</td>\n", | |
" <td>531</td>\n", | |
" <td>135412</td>\n", | |
" </tr>\n", | |
" <tr>\n", | |
" <th>1</th>\n", | |
" <td>2020-07-16</td>\n", | |
" <td>Lake</td>\n", | |
" <td>Tennessee</td>\n", | |
" <td>47095</td>\n", | |
" <td>698</td>\n", | |
" <td>0</td>\n", | |
" <td>7016</td>\n", | |
" <td>0</td>\n", | |
" <td>99486</td>\n", | |
" </tr>\n", | |
" <tr>\n", | |
" <th>2</th>\n", | |
" <td>2020-07-16</td>\n", | |
" <td>Lee</td>\n", | |
" <td>Arkansas</td>\n", | |
" <td>5077</td>\n", | |
" <td>854</td>\n", | |
" <td>5</td>\n", | |
" <td>8857</td>\n", | |
" <td>564</td>\n", | |
" <td>96420</td>\n", | |
" </tr>\n", | |
" <tr>\n", | |
" <th>3</th>\n", | |
" <td>2020-07-16</td>\n", | |
" <td>Dakota</td>\n", | |
" <td>Nebraska</td>\n", | |
" <td>31043</td>\n", | |
" <td>1864</td>\n", | |
" <td>41</td>\n", | |
" <td>20026</td>\n", | |
" <td>2047</td>\n", | |
" <td>93078</td>\n", | |
" </tr>\n", | |
" <tr>\n", | |
" <th>4</th>\n", | |
" <td>2020-07-16</td>\n", | |
" <td>Buena Vista</td>\n", | |
" <td>Iowa</td>\n", | |
" <td>19021</td>\n", | |
" <td>1745</td>\n", | |
" <td>12</td>\n", | |
" <td>19620</td>\n", | |
" <td>611</td>\n", | |
" <td>88939</td>\n", | |
" </tr>\n", | |
" <tr>\n", | |
" <th>...</th>\n", | |
" <td>...</td>\n", | |
" <td>...</td>\n", | |
" <td>...</td>\n", | |
" <td>...</td>\n", | |
" <td>...</td>\n", | |
" <td>...</td>\n", | |
" <td>...</td>\n", | |
" <td>...</td>\n", | |
" <td>...</td>\n", | |
" </tr>\n", | |
" <tr>\n", | |
" <th>3078</th>\n", | |
" <td>2020-07-16</td>\n", | |
" <td>Summers</td>\n", | |
" <td>West Virginia</td>\n", | |
" <td>54089</td>\n", | |
" <td>2</td>\n", | |
" <td>0</td>\n", | |
" <td>12573</td>\n", | |
" <td>0</td>\n", | |
" <td>159</td>\n", | |
" </tr>\n", | |
" <tr>\n", | |
" <th>3079</th>\n", | |
" <td>2020-07-16</td>\n", | |
" <td>Blaine</td>\n", | |
" <td>Montana</td>\n", | |
" <td>30005</td>\n", | |
" <td>1</td>\n", | |
" <td>0</td>\n", | |
" <td>6681</td>\n", | |
" <td>0</td>\n", | |
" <td>149</td>\n", | |
" </tr>\n", | |
" <tr>\n", | |
" <th>3080</th>\n", | |
" <td>2020-07-16</td>\n", | |
" <td>Grant</td>\n", | |
" <td>Oregon</td>\n", | |
" <td>41023</td>\n", | |
" <td>1</td>\n", | |
" <td>0</td>\n", | |
" <td>7199</td>\n", | |
" <td>0</td>\n", | |
" <td>138</td>\n", | |
" </tr>\n", | |
" <tr>\n", | |
" <th>3081</th>\n", | |
" <td>2020-07-16</td>\n", | |
" <td>Lee</td>\n", | |
" <td>Kentucky</td>\n", | |
" <td>21129</td>\n", | |
" <td>1</td>\n", | |
" <td>0</td>\n", | |
" <td>7403</td>\n", | |
" <td>0</td>\n", | |
" <td>135</td>\n", | |
" </tr>\n", | |
" <tr>\n", | |
" <th>3082</th>\n", | |
" <td>2020-07-16</td>\n", | |
" <td>Webster</td>\n", | |
" <td>West Virginia</td>\n", | |
" <td>54101</td>\n", | |
" <td>1</td>\n", | |
" <td>0</td>\n", | |
" <td>8114</td>\n", | |
" <td>0</td>\n", | |
" <td>123</td>\n", | |
" </tr>\n", | |
" </tbody>\n", | |
"</table>\n", | |
"<p>3083 rows × 9 columns</p>\n", | |
"</div>" | |
], | |
"text/plain": [ | |
" date county state fips cases deaths \\\n", | |
"0 2020-07-16 Trousdale Tennessee 47169 1528 6 \n", | |
"1 2020-07-16 Lake Tennessee 47095 698 0 \n", | |
"2 2020-07-16 Lee Arkansas 5077 854 5 \n", | |
"3 2020-07-16 Dakota Nebraska 31043 1864 41 \n", | |
"4 2020-07-16 Buena Vista Iowa 19021 1745 12 \n", | |
"... ... ... ... ... ... ... \n", | |
"3078 2020-07-16 Summers West Virginia 54089 2 0 \n", | |
"3079 2020-07-16 Blaine Montana 30005 1 0 \n", | |
"3080 2020-07-16 Grant Oregon 41023 1 0 \n", | |
"3081 2020-07-16 Lee Kentucky 21129 1 0 \n", | |
"3082 2020-07-16 Webster West Virginia 54101 1 0 \n", | |
"\n", | |
" population deaths_per_million cases_per_million \n", | |
"0 11284 531 135412 \n", | |
"1 7016 0 99486 \n", | |
"2 8857 564 96420 \n", | |
"3 20026 2047 93078 \n", | |
"4 19620 611 88939 \n", | |
"... ... ... ... \n", | |
"3078 12573 0 159 \n", | |
"3079 6681 0 149 \n", | |
"3080 7199 0 138 \n", | |
"3081 7403 0 135 \n", | |
"3082 8114 0 123 \n", | |
"\n", | |
"[3083 rows x 9 columns]" | |
] | |
}, | |
"execution_count": 6, | |
"metadata": {}, | |
"output_type": "execute_result" | |
} | |
], | |
"source": [ | |
"pandas.read_csv(url)" | |
] | |
}, | |
{ | |
"cell_type": "code", | |
"execution_count": 7, | |
"metadata": {}, | |
"outputs": [], | |
"source": [ | |
"sql = \"\"\"\n", | |
"select\n", | |
" date,\n", | |
" county,\n", | |
" state,\n", | |
" fips,\n", | |
" cases,\n", | |
" deaths,\n", | |
" population,\n", | |
" deaths_per_million,\n", | |
" cases_per_million\n", | |
"from\n", | |
" latest_ny_times_counties_with_populations\n", | |
"where\n", | |
" state = 'Texas'\n", | |
"order by\n", | |
" cases_per_million desc\n", | |
"\"\"\"" | |
] | |
}, | |
{ | |
"cell_type": "code", | |
"execution_count": 8, | |
"metadata": {}, | |
"outputs": [], | |
"source": [ | |
"from urllib.parse import urlencode" | |
] | |
}, | |
{ | |
"cell_type": "code", | |
"execution_count": 9, | |
"metadata": {}, | |
"outputs": [], | |
"source": [ | |
"url = \"https://covid-19.datasettes.com/covid.csv?\" + urlencode({\n", | |
" \"sql\": sql\n", | |
"})" | |
] | |
}, | |
{ | |
"cell_type": "code", | |
"execution_count": 10, | |
"metadata": {}, | |
"outputs": [ | |
{ | |
"data": { | |
"text/html": [ | |
"<div>\n", | |
"<style scoped>\n", | |
" .dataframe tbody tr th:only-of-type {\n", | |
" vertical-align: middle;\n", | |
" }\n", | |
"\n", | |
" .dataframe tbody tr th {\n", | |
" vertical-align: top;\n", | |
" }\n", | |
"\n", | |
" .dataframe thead th {\n", | |
" text-align: right;\n", | |
" }\n", | |
"</style>\n", | |
"<table border=\"1\" class=\"dataframe\">\n", | |
" <thead>\n", | |
" <tr style=\"text-align: right;\">\n", | |
" <th></th>\n", | |
" <th>date</th>\n", | |
" <th>county</th>\n", | |
" <th>state</th>\n", | |
" <th>fips</th>\n", | |
" <th>cases</th>\n", | |
" <th>deaths</th>\n", | |
" <th>population</th>\n", | |
" <th>deaths_per_million</th>\n", | |
" <th>cases_per_million</th>\n", | |
" </tr>\n", | |
" </thead>\n", | |
" <tbody>\n", | |
" <tr>\n", | |
" <th>0</th>\n", | |
" <td>2020-07-16</td>\n", | |
" <td>Moore</td>\n", | |
" <td>Texas</td>\n", | |
" <td>48341</td>\n", | |
" <td>924</td>\n", | |
" <td>15</td>\n", | |
" <td>20940</td>\n", | |
" <td>716</td>\n", | |
" <td>44126</td>\n", | |
" </tr>\n", | |
" <tr>\n", | |
" <th>1</th>\n", | |
" <td>2020-07-16</td>\n", | |
" <td>Walker</td>\n", | |
" <td>Texas</td>\n", | |
" <td>48471</td>\n", | |
" <td>2513</td>\n", | |
" <td>28</td>\n", | |
" <td>72971</td>\n", | |
" <td>383</td>\n", | |
" <td>34438</td>\n", | |
" </tr>\n", | |
" <tr>\n", | |
" <th>2</th>\n", | |
" <td>2020-07-16</td>\n", | |
" <td>Anderson</td>\n", | |
" <td>Texas</td>\n", | |
" <td>48001</td>\n", | |
" <td>1956</td>\n", | |
" <td>4</td>\n", | |
" <td>57735</td>\n", | |
" <td>69</td>\n", | |
" <td>33878</td>\n", | |
" </tr>\n", | |
" <tr>\n", | |
" <th>3</th>\n", | |
" <td>2020-07-16</td>\n", | |
" <td>Titus</td>\n", | |
" <td>Texas</td>\n", | |
" <td>48449</td>\n", | |
" <td>1030</td>\n", | |
" <td>6</td>\n", | |
" <td>32750</td>\n", | |
" <td>183</td>\n", | |
" <td>31450</td>\n", | |
" </tr>\n", | |
" <tr>\n", | |
" <th>4</th>\n", | |
" <td>2020-07-16</td>\n", | |
" <td>Jones</td>\n", | |
" <td>Texas</td>\n", | |
" <td>48253</td>\n", | |
" <td>608</td>\n", | |
" <td>0</td>\n", | |
" <td>20083</td>\n", | |
" <td>0</td>\n", | |
" <td>30274</td>\n", | |
" </tr>\n", | |
" <tr>\n", | |
" <th>...</th>\n", | |
" <td>...</td>\n", | |
" <td>...</td>\n", | |
" <td>...</td>\n", | |
" <td>...</td>\n", | |
" <td>...</td>\n", | |
" <td>...</td>\n", | |
" <td>...</td>\n", | |
" <td>...</td>\n", | |
" <td>...</td>\n", | |
" </tr>\n", | |
" <tr>\n", | |
" <th>244</th>\n", | |
" <td>2020-07-16</td>\n", | |
" <td>Kinney</td>\n", | |
" <td>Texas</td>\n", | |
" <td>48271</td>\n", | |
" <td>4</td>\n", | |
" <td>0</td>\n", | |
" <td>3667</td>\n", | |
" <td>0</td>\n", | |
" <td>1090</td>\n", | |
" </tr>\n", | |
" <tr>\n", | |
" <th>245</th>\n", | |
" <td>2020-07-16</td>\n", | |
" <td>Foard</td>\n", | |
" <td>Texas</td>\n", | |
" <td>48155</td>\n", | |
" <td>1</td>\n", | |
" <td>0</td>\n", | |
" <td>1155</td>\n", | |
" <td>0</td>\n", | |
" <td>865</td>\n", | |
" </tr>\n", | |
" <tr>\n", | |
" <th>246</th>\n", | |
" <td>2020-07-16</td>\n", | |
" <td>Hall</td>\n", | |
" <td>Texas</td>\n", | |
" <td>48191</td>\n", | |
" <td>2</td>\n", | |
" <td>1</td>\n", | |
" <td>2964</td>\n", | |
" <td>337</td>\n", | |
" <td>674</td>\n", | |
" </tr>\n", | |
" <tr>\n", | |
" <th>247</th>\n", | |
" <td>2020-07-16</td>\n", | |
" <td>Coleman</td>\n", | |
" <td>Texas</td>\n", | |
" <td>48083</td>\n", | |
" <td>5</td>\n", | |
" <td>0</td>\n", | |
" <td>8175</td>\n", | |
" <td>0</td>\n", | |
" <td>611</td>\n", | |
" </tr>\n", | |
" <tr>\n", | |
" <th>248</th>\n", | |
" <td>2020-07-16</td>\n", | |
" <td>Baylor</td>\n", | |
" <td>Texas</td>\n", | |
" <td>48023</td>\n", | |
" <td>1</td>\n", | |
" <td>0</td>\n", | |
" <td>3509</td>\n", | |
" <td>0</td>\n", | |
" <td>284</td>\n", | |
" </tr>\n", | |
" </tbody>\n", | |
"</table>\n", | |
"<p>249 rows × 9 columns</p>\n", | |
"</div>" | |
], | |
"text/plain": [ | |
" date county state fips cases deaths population \\\n", | |
"0 2020-07-16 Moore Texas 48341 924 15 20940 \n", | |
"1 2020-07-16 Walker Texas 48471 2513 28 72971 \n", | |
"2 2020-07-16 Anderson Texas 48001 1956 4 57735 \n", | |
"3 2020-07-16 Titus Texas 48449 1030 6 32750 \n", | |
"4 2020-07-16 Jones Texas 48253 608 0 20083 \n", | |
".. ... ... ... ... ... ... ... \n", | |
"244 2020-07-16 Kinney Texas 48271 4 0 3667 \n", | |
"245 2020-07-16 Foard Texas 48155 1 0 1155 \n", | |
"246 2020-07-16 Hall Texas 48191 2 1 2964 \n", | |
"247 2020-07-16 Coleman Texas 48083 5 0 8175 \n", | |
"248 2020-07-16 Baylor Texas 48023 1 0 3509 \n", | |
"\n", | |
" deaths_per_million cases_per_million \n", | |
"0 716 44126 \n", | |
"1 383 34438 \n", | |
"2 69 33878 \n", | |
"3 183 31450 \n", | |
"4 0 30274 \n", | |
".. ... ... \n", | |
"244 0 1090 \n", | |
"245 0 865 \n", | |
"246 337 674 \n", | |
"247 0 611 \n", | |
"248 0 284 \n", | |
"\n", | |
"[249 rows x 9 columns]" | |
] | |
}, | |
"execution_count": 10, | |
"metadata": {}, | |
"output_type": "execute_result" | |
} | |
], | |
"source": [ | |
"pandas.read_csv(url)" | |
] | |
}, | |
{ | |
"cell_type": "code", | |
"execution_count": null, | |
"metadata": {}, | |
"outputs": [], | |
"source": [] | |
} | |
], | |
"metadata": { | |
"kernelspec": { | |
"display_name": "Python 3", | |
"language": "python", | |
"name": "python3" | |
}, | |
"language_info": { | |
"codemirror_mode": { | |
"name": "ipython", | |
"version": 3 | |
}, | |
"file_extension": ".py", | |
"mimetype": "text/x-python", | |
"name": "python", | |
"nbconvert_exporter": "python", | |
"pygments_lexer": "ipython3", | |
"version": "3.8.3" | |
} | |
}, | |
"nbformat": 4, | |
"nbformat_minor": 4 | |
} |
Sign up for free
to join this conversation on GitHub.
Already have an account?
Sign in to comment