Stian Soiland-Reyes stain
stain
/ paq2svg.sh
Last active
December 15, 2015 11:49
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| #!/bin/bash | |
| set -e | |
| PROVTOOLBOX="$HOME/software/provToolbox" | |
| PROVCONVERT="$PROVTOOLBOX/bin/provconvert" | |
| provUri=`curl -s -I $1 | grep ^Link:.*has_provenance | sed 's/.*<//' | sed 's/>.*//' | head -n 1` | |
| provn=/tmp/$$.provn |
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| @prefix xsd: <http://www.w3.org/2001/XMLSchema#> . | |
| @prefix pav: <http://purl.org/pav/> . | |
| @prefix foaf: <http://xmlns.com/foaf/0.1/> . | |
| @prefix prov: <http://www.w3.org/ns/prov#> . | |
| @prefix : <http://example.com/blog#> . | |
| <http://example.com/blog.html> | |
| pav:createdBy :alice ; | |
| pav:createdWith :wordpress ; |
stain
/ gist:5262532
Created
March 28, 2013 11:37
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| @prefix pav: <http://purl.org/pav/> . | |
| @prefix prov: <http://www.w3.org/ns/prov#> . | |
| @prefix prv: <http://purl.org/net/provenance/core#> . | |
| @prefix prvTypes: <http://purl.org/net/provenance/types#> . | |
| @prefix http: <http://www.w3.org/2006/http#> . | |
| <http://example.com/data.csv> a prv:DataItem, prov:Entity ; | |
| pav:retrievedFrom <http://example.org/originalData> ; | |
| prv:retrievedBy [ a prvTypes:HTTPBasedDataAccess ; | |
| prv:accessedResource <http://example.org/originalData> ; |
stain
/ TestZipFS.java
Last active
December 17, 2015 09:59
Not sure if this is a feature or bug in ZipFS.. a path can be both a file and folder at the same time -- kind of.
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| import static org.junit.Assert.*; | |
| import static org.junit.Assert.assertFalse; | |
| import static org.junit.Assert.assertTrue; | |
| import static org.junit.Assert.fail; | |
| import java.net.URI; | |
| import java.nio.file.DirectoryStream; | |
| import java.nio.file.FileAlreadyExistsException; | |
| import java.nio.file.FileSystem; | |
| import java.nio.file.FileSystems; |
stain
/ TestZipFS.java
Created
May 16, 2013 13:55
Support for ZIPs with spaces are broken in Java 8b89
Related to http://stackoverflow.com/a/14034572/412540 and http://bugs.sun.com/bugdatabase/view_bug.do?bug_id=7156873 ?
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| package org.purl.wf4ever.robundle.fs; | |
| import java.net.URI; | |
| import java.nio.file.DirectoryStream; | |
| import java.nio.file.FileSystem; | |
| import java.nio.file.FileSystemNotFoundException; | |
| import java.nio.file.FileSystems; | |
| import java.nio.file.Files; | |
| import java.nio.file.Path; |
stain
/ storyline-prov.ttl
Created
May 16, 2013 16:23
Quick draft of alignment of http://purl.org/ontology/storyline and
http://www.w3.org/ns/prov# (PROV-O
See https://twitter.com/octodude/status/335061817686634496
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| @prefix rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#> . | |
| @prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> . | |
| @prefix owl: <http://www.w3.org/2002/07/owl#> . | |
| @prefix dct: <http://purl.org/dc/terms/> . | |
| @prefix prov: <http://www.w3.org/ns/prov#> . | |
| @prefix nsl: <http://purl.org/ontology/storyline/> . | |
| <> a owl:Ontology ; |
stain
/ gist:5639385
Created
May 23, 2013 21:00
ORCID API updated to show (very) minimal FOAF profile.
Do NOT pull - tidyup needed! :-))
https://github.com/stain/ORCID-Source/tree/rdf
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| stain@vmint ~ $ curl -H "Accept: application/rdf+xml" http://localhost:8080/orcid-pub-web-1.1.5-SNAPSHOT/0000-0001-5533-6255 | |
| <rdf:RDF | |
| xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" | |
| xmlns:foaf="http://xmlns.com/foaf/0.1/" | |
| xmlns:owl="http://www.w3.org/2002/07/owl#" | |
| xmlns:xsd="http://www.w3.org/2001/XMLSchema#" | |
| xmlns:rdfs="http://www.w3.org/2000/01/rdf-schema#" > | |
| <rdf:Description rdf:about="http://localhost:8080/orcid-web/0000-0001-5533-6255"> | |
| <foaf:familyName>Doe</foaf:familyName> | |
| <foaf:givenName>John</foaf:givenName> |
stain
/ manifest.ttl
Created
May 29, 2013 13:30
Suggestion on how to do ORE aggregation with snapshots - for RO bundles - https://w3id.org/bundle
https://twitter.com/edsu/status/339727143053426689 Here snapshots/9e9c036c... is a non-aggregated snapshot retrieved from the aggregated absolute URI <http://example.com/comments.txt>, and the aggregated </README.txt> has been retrieved from the non…
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| @base <app://2b9486f0-54d8-4274-b241-7669538b0d2f/.ro/> . | |
| @prefix rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#> . | |
| @prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> . | |
| @prefix owl: <http://www.w3.org/2002/07/owl#> . | |
| @prefix xsd: <http://www.w3.org/2001/XMLSchema#> . | |
| @prefix prov: <http://www.w3.org/ns/prov#> . | |
| @prefix pav: <http://purl.org/pav/> . | |
| @prefix prov: <http://www.w3.org/ns/prov#> . | |
| @prefix foaf: <http://xmlns.com/foaf/0.1/> . | |
| @prefix dc: <http://purl.org/dc/elements/1.1/> . |
This file has been truncated, but you can view the full file.
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| { | |
| "@context" : [ "https://w3id.org/scufl2/context", { | |
| "@base" : "http://ns.taverna.org.uk/2010/workflowBundle/064fcb33-cb4c-424c-a608-258c8529652e/" | |
| } ], | |
| "id" : "http://ns.taverna.org.uk/2010/workflowBundle/064fcb33-cb4c-424c-a608-258c8529652e/", | |
| "workflow" : { | |
| "id" : "workflow/Generic_ENM_workflow/", | |
| "name" : "Generic_ENM_workflow", | |
| "revisions" : [ { | |
| "id" : "http://ns.taverna.org.uk/2010/workflow/064fcb33-cb4c-424c-a608-258c8529652e/", |
stain
/ configuration.json
Created
June 12, 2013 08:10
Proposal: JSON as SCUFL2's configuration format. <configuration.json> represents a complete configuration of the REST activity. This JSON validates according to the JSON Schema <schema.json>.
<context.json> is a JSON-LD context (linked to with "@context") that can be used to create the RDF in <rdf-from-json.ttl>. This RDF shows clearly a very si…
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| { | |
| "@context": "http://ns.taverna.org.uk/2010/activity/rest.context", | |
| "outgoingDataFormat": "String", | |
| "escapeParameters": false, | |
| "request": { | |
| "httpMethod": "POST", | |
| "headers": [ | |
| { "header": "Accept", | |
| "value": "audio/mpeg" }, | |
| { "header": "Content-Type", |