Shakeel thirdknife

## npm install on node v0.4.12
/node$ sudo curl http://npmjs.org/install.sh | sh
  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
                                 Dload  Upload   Total   Spent    Left  Speed
100  5100  100  5100    0     0   4100      0  0:00:01  0:00:01 --:--:--  8793
fetching: http://registry.npmjs.org/npm/-/npm-1.0.30.tgz
0.4.12
1.0.30
cleanup prefix=/usr/local

All clean!

## gist:2251640
stdin: is not a tty

## pre-receive.sh
#!/bin/sh
while read old new branch
do
    case "$new-$branch" in
        000000000000000000*)
            : echo "ignore deleted"
            ;;
        *-refs/heads/live )
            echo "UPDATING LIVE SITE";
            git archive $new | (

## drupal-quick-dump.sh
#!/bin/bash
# usage: drupal-quick-dump user host database

USER="$1"
HOST="$2"
DB="$3"
DATE=`date +%Y%m%d`

# Get User Password
echo "Please provide the password for ${USER} on db ${DB} hosted at ${HOST}:"

## gist:7448163
<ul id="item-list">
    {{#each itinerary}}
<li>{{_id}}</li>
    {{/each}}
</ul>

## 0_reuse_code.js
// Use Gists to store code you would like to remember later on
console.log(window); // log the "window" object to the console

## gist:94a277cb506b7275fc4d
#!/bin/bash
# My first script

# make sure you always put $f in double quotes to avoid any nasty surprises i.e. "$f"
for f in ~/Desktop/dsg1_1000Genome/1000Genome_dsg1/1000Genome_dsg1/*
do
	echo "Processing $f file..."
	mv $f $f".vcf"
	bgzip $f".vcf"
	cat ~/Desktop/dsg1_1000Genome/arch_dsg1.fasta | perl vcf-consensus -s $f $f".vcf.gz" > $f".fa"

## messages.php
<?php
require_once(APPPATH.'/libraries/REST_Controller.php');
require_once(APPPATH . '/libraries/TSBAuth.php');
require_once(APPPATH . '/libraries/DeviceDetect.php');

class Messages extends REST_Controller {
    var $requestUser = null;
    public static $DEVICE  ;
    function __construct() {
        parent::__construct();

## gist:dea713a07aeaa127cd3f
/**
 * INTERACTIVE CHROMOSOME VISUALIZATION
 * opt : initialization options object
 *  + target: REQUIRED
 *  + segment: REQUIRED
 *
 *
 */

var d3 = require("d3");

## gist:efc2d2722510c245475b
[{"ChrLocation":"p","MemberName":"VAMP1"},{"ChrLocation":"p11.23","MemberName":"KCNJ8"},{"ChrLocation":"p13.31","MemberName":"ING4"},{"ChrLocation":"q","MemberName":"SLC38A2"},{"ChrLocation":"q","MemberName":"PLEKHA9"},{"ChrLocation":"q","MemberName":"CHST11"},{"ChrLocation":"q","MemberName":"SOCS2"},{"ChrLocation":"q11","MemberName":"ITGA5"},{"ChrLocation":"q12","MemberName":"ACCN2"},{"ChrLocation":"q12","MemberName":"RND1"},{"ChrLocation":"q12","MemberName":"PRKAG1"},{"ChrLocation":"q12","MemberName":"DHH"},{"ChrLocation":"q13","MemberName":"ITGA7"},{"ChrLocation":"q13","MemberName":"CDK2"},{"ChrLocation":"q13","MemberName":"PDE1B"},{"ChrLocation":"q13","MemberName":"SLC38A4"},{"ChrLocation":"q13","MemberName":"CACNB3"},{"ChrLocation":"q13","MemberName":"KCNH3"},{"ChrLocation":"q13","MemberName":"MYO1A"},{"ChrLocation":"q13","MemberName":"ZNFN1A4"},{"ChrLocation":"q13","MemberName":"NFE2"},{"ChrLocation":"q13","MemberName":"IGFBP6"},{"ChrLocation":"q13","MemberName":"ERBB3"},{"ChrLocation":"q13","MemberName
	/node$ sudo curl http://npmjs.org/install.sh \| sh
	% Total % Received % Xferd Average Speed Time Time Time Current
	Dload Upload Total Spent Left Speed
	100 5100 100 5100 0 0 4100 0 0:00:01 0:00:01 --:--:-- 8793
	fetching: http://registry.npmjs.org/npm/-/npm-1.0.30.tgz
	0.4.12
	1.0.30
	cleanup prefix=/usr/local

	All clean!
	#!/bin/sh
	while read old new branch
	do
	case "$new-$branch" in
	000000000000000000*)
	: echo "ignore deleted"
	;;
	*-refs/heads/live )
	echo "UPDATING LIVE SITE";
	git archive $new \| (
	#!/bin/bash
	# usage: drupal-quick-dump user host database

	USER="$1"
	HOST="$2"
	DB="$3"
	DATE=`date +%Y%m%d`

	# Get User Password
	echo "Please provide the password for ${USER} on db ${DB} hosted at ${HOST}:"
	<ul id="item-list">
	{{#each itinerary}}
	<li>{{_id}}</li>
	{{/each}}
	</ul>
	// Use Gists to store code you would like to remember later on
	console.log(window); // log the "window" object to the console
	#!/bin/bash
	# My first script

	# make sure you always put $f in double quotes to avoid any nasty surprises i.e. "$f"
	for f in ~/Desktop/dsg1_1000Genome/1000Genome_dsg1/1000Genome_dsg1/*
	do
	echo "Processing $f file..."
	mv $f $f".vcf"
	bgzip $f".vcf"
	cat ~/Desktop/dsg1_1000Genome/arch_dsg1.fasta \| perl vcf-consensus -s $f $f".vcf.gz" > $f".fa"
	<?php
	require_once(APPPATH.'/libraries/REST_Controller.php');
	require_once(APPPATH . '/libraries/TSBAuth.php');
	require_once(APPPATH . '/libraries/DeviceDetect.php');

	class Messages extends REST_Controller {
	var $requestUser = null;
	public static $DEVICE ;
	function __construct() {
	parent::__construct();
	/**
	* INTERACTIVE CHROMOSOME VISUALIZATION
	* opt : initialization options object
	* + target: REQUIRED
	* + segment: REQUIRED
	*
	*
	*/

	var d3 = require("d3");