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Andrés Zúñiga variux

  • Universita di Pisa
  • Italy
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from transformers import pipeline
with open("/home/arteaga/prot/scripts/input_denovo_multiple.txt", "r") as f:
for line in f:
secuencia = []
protgpt2 = pipeline('text-generation', model="/home/arteaga/prot/data/finetuned")
sequences = protgpt2(line, max_length=50, min_length = 0, do_sample=True, top_k=950, repetition_penalty=1.2, num_return_sequences=10, eos_token_id=0)
with open("/home/arteaga/prot/scripts/output_denovo_multiple.txt", "w") as wf:
for seq in sequences:
wf.write(seq)
package biojava.biojava_project;
import java.io.BufferedReader;
import java.io.File;
import java.io.IOException;
import java.io.InputStreamReader;
import java.io.PrintStream;
import java.net.HttpURLConnection;
import java.net.URL;
import java.util.LinkedHashMap;
package automat;
import java.util.Random;
public class Cell {
public char cell_type; // attribute
public static void main(String[] args) {
def extract_proteinid(description):
splitted = description.split(" ")
for feature in splitted:
if "protein_id" in feature:
print(feature.split("=")[1][:-1])
@variux
variux / programamichael.py
Created April 11, 2019 05:24
programa michael
#programa para imprimir los números pares del 1 al 100 (Este)
for n in range(1,101):
if n % 2 == 0:
print(n)
#Programa de la sumatoria de un numermo (Fibonacci)
numero = int(input("Ingrese un numero para calcular su sumatoria:"))
a = 0
@variux
variux / velocidad.py
Last active February 11, 2019 04:05
proyecto alejandro miranda
import numpy
import pandas as pd
import matplotlib.pyplot as plt
numpy.set_printoptions(suppress=True)
def aceleracion(velocidad):
return (3-(0.000062*(velocidad**2)))
def velocidad(tiempo):
return (0.00001*(tiempo**3) - 0.00488*(tiempo**2) + 0.75795*tiempo + 181.3566)
def datos_velocidad_turbohelice(incremento):
@variux
variux / amp.js
Created December 3, 2018 16:05
Código Javascript Azure Media Player
var myOptions = {
"nativeControlsForTouch": false,
controls: true,
autoplay: true,
width: "640",
height: "400",
}
myPlayer = amp("azuremediaplayer", myOptions);
myPlayer.src([
{
@variux
variux / videotag.html
Created December 3, 2018 16:03
Video Tag Azure media player
<video id="azuremediaplayer" class="azuremediaplayer amp-default-skin amp-big-play-centered" tabindex="0"></video>
@variux
variux / head.html
Created December 3, 2018 16:02
Codigo del head
<link href="//amp.azure.net/libs/amp/2.2.2/skins/amp-default/azuremediaplayer.min.css" rel="stylesheet">
<script src="//amp.azure.net/libs/amp/2.2.2/azuremediaplayer.min.js"></script>
@variux
variux / estacion.py
Last active December 4, 2018 03:33
Proyecto de Valeria [03/12/18]
import csv
import os
import numpy as np
import matplotlib.pyplot as plt
class CsvHandler():
file_route = None