vincentdavis

text = Query id, Subject id, % identity, alignment length, mismatches, gap openings, q. start, q. end, s. start, s. end, e-value, bit score
csv = "Query id","Subject id","% identity","alignment length","mismatches","gap openings","q. start","q. end","s. start","s. end","e-value","bit score"

vincentdavis

def debruijn(k, n):
    """
    De Bruijn sequence for alphabet size k (0,1,2...k-1)
    and subsequences of length n.
    From wikipedia Sep 22 2013
    """
    a = [0] * k * n
    sequence = []
    def db(t, p,):
        if t > n:

vincentdavis

#!/bin/bash
for X in $(cut -f6 -d ':' /etc/passwd |sort |uniq); do
    if [ -s "${X}/.ssh/authorized_keys" ]; then
        echo "### ${X}: "
        cat "${X}/.ssh/authorized_keys"
        echo ""
    fi
done

vincentdavis

Keybase proof

I hereby claim:

• I am vincentdavis on github.
• I am vincentdavis (https://keybase.io/vincentdavis) on keybase.
• I have a public key ASC5pBUtHGp8xVqEAo3JD13tbDDOF8a309iI0vqonm2W1wo

To claim this, I am signing this object:

vincentdavis

import requests
from requests_html import HTMLSession
import pandas as pd

mainpage = "https://covid19.colorado.gov/covid19-outbreak-data"
try:
    session = HTMLSession()
    response = session.get(mainpage)
except:
    print('failed to load main page')

vincentdavis

If you're manipulating files stored on a remote machine, such as ARCUS or ARCHER supercomputers, you can mount the remote file system and interact with the files as if they were stored on your own machine. This makes viewing, editing, and opening files in software on your computer a breeze.

To do this on OSX, first ensure you have homebrew installed. If brew is not recognised in Terminal, run

ruby -e "$(curl -fsSL https://raw.github.com/mxcl/homebrew/go)"