Abhijit Dasgupta webbedfeet

## common-sci-symbols.md

      
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                webbedfeet
                / common-sci-symbols.md
            
            
              Created
              April 11, 2017 18:25
                — forked from benmarwick/common-sci-symbols.md
            
              
                Commonly used scientific symbols in pandoc markdown
              
          
    Commonly used scientific symbols in pandoc markdown

encoding is UTF-8, needs pdflatex
per mille sign

plain text: ‰ (doesn't render properly in PDF)
HTML: &permil;  (renders properly in PDF)
LaTeX: $\text{\textperthousand}$ (renders properly in PDF)

delta sign

  
## tar_h5.py
from pathlib import Path
import tarfile

with tarfile.open('data.tar','w') as tar:
  for name in Path('.').glob('*/filtered_feature_bc_matrix.h5'):
    tar.add(name)


## init.vim
syntax on
filetype plugin indent on
set number
set path+=**
set noswapfile
set undofile
set incsearch
set smartindent
set ic
set expandtab

## df_diff.py
def df_diff(d1, d2):
    """
    df_diff Create a DataFrame containing rows of d1 not in d2

    Arguments:
        d1 -- A data frame
        d2 -- Another DataFrame which is a subset of d1

    Returns:
        A pandas DataFrame containing rows of d1 that are not in d2

## Makefile
# For a description of this file, please see:
# https://www.innoq.com/en/blog/markdown-with-zotero-workflow
#------------------------------------------------------------

# what's the name of the generated output file(s)
OUTPUT=out

# what's the name of the markdown source file
SOURCE=principles-content.md

## dailyNoteTemplate.txt
---
creation date: <% tp.file.creation_date() %>
tags: DailyNote <% tp.file.title.split('-')[0] %>
---

modification date: <%+ tp.file.last_modified_date("dddd Do MMMM YYYY HH:mm:ss") %> // This doesn't currently work in front matter, hoping that gets fixed.

# <% tp.file.title %>

<< [[<% tp.date.now("YYYY-MM-DD", -1, tp.file.title, "YYYY-MM-DD") %>]] | [[<% tp.date.now("YYYY-MM-DD", 1, tp.file.title, "YYYY-MM-DD") %>]]>>

## MungingFWF.ipynb

      
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                webbedfeet
                / MungingFWF.ipynb
            
            
              Last active
              September 30, 2021 19:49
            
              
                Munging fixed width format
              
          
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## testdash.Rmd
---
title: "Example dashboard"
output:
    flexdashboard::flex_dashboard:
        orientation: columns
        vertical_layout: scroll
    html_document: default
---

```{r setup, include=FALSE}

## coronaDeaths.R
# remotes::install_github('ramikrispin/coronavirus')
library(coronavirus)
update_datasets()
pacman::p_load(char=c('tidyverse','janitor', 'ggrepel'))

deaths <- coronavirus %>%
  clean_names() %>%
  filter(type=='death') %>%
  group_by(country_region, date) %>%
  summarise(cases = sum(cases)) %>%

## lowpass.py
# https://stackoverflow.com/questions/25191620/
#   creating-lowpass-filter-in-scipy-understanding-methods-and-units

import numpy as np
from scipy.signal import butter, lfilter, freqz
from matplotlib import pyplot as plt


def butter_lowpass(cutoff, fs, order=5):
    nyq = 0.5 * fs
	from pathlib import Path
	import tarfile

	with tarfile.open('data.tar','w') as tar:
	for name in Path('.').glob('*/filtered_feature_bc_matrix.h5'):
	tar.add(name)
	syntax on
	filetype plugin indent on
	set number
	set path+=**
	set noswapfile
	set undofile
	set incsearch
	set smartindent
	set ic
	set expandtab
	def df_diff(d1, d2):
	"""
	df_diff Create a DataFrame containing rows of d1 not in d2

	Arguments:
	d1 -- A data frame
	d2 -- Another DataFrame which is a subset of d1

	Returns:
	A pandas DataFrame containing rows of d1 that are not in d2
	# For a description of this file, please see:
	# https://www.innoq.com/en/blog/markdown-with-zotero-workflow
	#------------------------------------------------------------

	# what's the name of the generated output file(s)
	OUTPUT=out

	# what's the name of the markdown source file
	SOURCE=principles-content.md
	---
	creation date: <% tp.file.creation_date() %>
	tags: DailyNote <% tp.file.title.split('-')[0] %>
	---

	modification date: <%+ tp.file.last_modified_date("dddd Do MMMM YYYY HH:mm:ss") %> // This doesn't currently work in front matter, hoping that gets fixed.

	# <% tp.file.title %>

	<< [[<% tp.date.now("YYYY-MM-DD", -1, tp.file.title, "YYYY-MM-DD") %>]] \| [[<% tp.date.now("YYYY-MM-DD", 1, tp.file.title, "YYYY-MM-DD") %>]]>>
	---
	title: "Example dashboard"
	output:
	flexdashboard::flex_dashboard:
	orientation: columns
	vertical_layout: scroll
	html_document: default
	---

	```{r setup, include=FALSE}
	# remotes::install_github('ramikrispin/coronavirus')
	library(coronavirus)
	update_datasets()
	pacman::p_load(char=c('tidyverse','janitor', 'ggrepel'))

	deaths <- coronavirus %>%
	clean_names() %>%
	filter(type=='death') %>%
	group_by(country_region, date) %>%
	summarise(cases = sum(cases)) %>%
	# https://stackoverflow.com/questions/25191620/
	# creating-lowpass-filter-in-scipy-understanding-methods-and-units

	import numpy as np
	from scipy.signal import butter, lfilter, freqz
	from matplotlib import pyplot as plt


	def butter_lowpass(cutoff, fs, order=5):
	nyq = 0.5 * fs