Created
October 27, 2018 05:01
-
-
Save yamasakih/3251b9e7feea427f450535403c82071a to your computer and use it in GitHub Desktop.
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
{ | |
"cells": [ | |
{ | |
"cell_type": "markdown", | |
"metadata": {}, | |
"source": [ | |
"## Comparison of speeds of DataFrame and svmlight files" | |
] | |
}, | |
{ | |
"cell_type": "code", | |
"execution_count": 1, | |
"metadata": {}, | |
"outputs": [ | |
{ | |
"name": "stdout", | |
"output_type": "stream", | |
"text": [ | |
"sys.version_info(major=3, minor=6, micro=2, releaselevel='final', serial=0)\n", | |
"sklearn version = 0.20.0\n" | |
] | |
} | |
], | |
"source": [ | |
"from itertools import product\n", | |
"from pathlib import Path\n", | |
"import sys\n", | |
"\n", | |
"import numpy as np\n", | |
"import pandas as pd\n", | |
"\n", | |
"import sklearn\n", | |
"from sklearn.datasets import dump_svmlight_file, load_svmlight_file\n", | |
"\n", | |
"\n", | |
"%matplotlib inline\n", | |
"\n", | |
"print(sys.version_info)\n", | |
"print(f'sklearn version = {sklearn.__version__}')" | |
] | |
}, | |
{ | |
"cell_type": "code", | |
"execution_count": 2, | |
"metadata": {}, | |
"outputs": [], | |
"source": [ | |
"def make_dataset(num_samples, num_bits, on_bit_ratio):\n", | |
" np.random.seed(20181021)\n", | |
"\n", | |
" X = np.random.binomial(1, on_bit_ratio, size=(num_samples, num_bits))\n", | |
" X = pd.DataFrame(X)\n", | |
" y = np.random.rand(num_samples).round(3) \n", | |
" return X, y" | |
] | |
}, | |
{ | |
"cell_type": "markdown", | |
"metadata": {}, | |
"source": [ | |
"### 1. Make dataset" | |
] | |
}, | |
{ | |
"cell_type": "markdown", | |
"metadata": {}, | |
"source": [ | |
"#### Make dataset directory" | |
] | |
}, | |
{ | |
"cell_type": "code", | |
"execution_count": 3, | |
"metadata": {}, | |
"outputs": [], | |
"source": [ | |
"p = Path('./dataset')\n", | |
"p.mkdir(parents=True, exist_ok=True)" | |
] | |
}, | |
{ | |
"cell_type": "markdown", | |
"metadata": {}, | |
"source": [ | |
"#### Make dataset parameters" | |
] | |
}, | |
{ | |
"cell_type": "code", | |
"execution_count": 4, | |
"metadata": {}, | |
"outputs": [], | |
"source": [ | |
"num_sample_set = (1000, 2000, 4000, 8000)\n", | |
"num_bit_set = (256, 512, 1024, 2048, 4096)\n", | |
"on_bit_ratios = (.1, .3, .5, .7, .9)\n", | |
"random_seeds = (0, 1, 2, 3, 4)" | |
] | |
}, | |
{ | |
"cell_type": "markdown", | |
"metadata": {}, | |
"source": [ | |
"#### Make dataset in dataset directory" | |
] | |
}, | |
{ | |
"cell_type": "code", | |
"execution_count": 5, | |
"metadata": {}, | |
"outputs": [], | |
"source": [ | |
"for num_samples, num_bits, on_bit_ratio, random_seed in product(num_sample_set, \n", | |
" num_bit_set, on_bit_ratios, random_seeds):\n", | |
" # Make dataset\n", | |
" X, y = make_dataset(num_samples, num_bits, on_bit_ratio)\n", | |
" file_name = f'{num_samples}_{num_bits}_{int(on_bit_ratio*100)}_{random_seed}.csv'\n", | |
"\n", | |
" # Save X and y as svmlight data\n", | |
" dump_svmlight_file(X, y, f'dataset/svmlight_{file_name}')\n", | |
"\n", | |
" # Save X and y as dataframe\n", | |
" X.insert(loc=0, column='y', value=y)\n", | |
" X.to_csv(f'dataset/dataframe_{file_name}', index=False, header=False)" | |
] | |
}, | |
{ | |
"cell_type": "markdown", | |
"metadata": {}, | |
"source": [ | |
"# EOF" | |
] | |
} | |
], | |
"metadata": { | |
"kernelspec": { | |
"display_name": "Python 3", | |
"language": "python", | |
"name": "python3" | |
}, | |
"language_info": { | |
"codemirror_mode": { | |
"name": "ipython", | |
"version": 3 | |
}, | |
"file_extension": ".py", | |
"mimetype": "text/x-python", | |
"name": "python", | |
"nbconvert_exporter": "python", | |
"pygments_lexer": "ipython3", | |
"version": "3.6.2" | |
} | |
}, | |
"nbformat": 4, | |
"nbformat_minor": 2 | |
} |
Sign up for free
to join this conversation on GitHub.
Already have an account?
Sign in to comment