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24sharkS / ropenms.md
Last active August 10, 2021 01:51
GSOC 2020 Final Report

OpenMS R Package

Introduction

OpenMS, an open-source C++ library for the analysis of mass spectrometric data exposes a large part of its functionality to the Python community via the automatically generated pyOpenMS package.In order to make the OpenMS algorithms available in R, we can use the reticulate package which is an R interface to python, to call the pyopenms methods. This project involved expanding this initial prototype to ccreate an R package to expose the classes and methods in pyopenms.

It is one of the selected projects under Open Bioinformatics Foundation for GSoC 2020. It was executed under the mentorship of Timo Sachsenberg, [Hannes Röst](https://gith