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openmpi-1.6.0 Configure terminal output on OSX Lion 10.7.4 using clang-3.1 and gfortran

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$ brew install -vd --fortran openmpi
==> Downloading http://www.open-mpi.org/software/ompi/v1.6/downloads/openmpi-1.6.tar.bz2
Already downloaded: /Library/Caches/Homebrew/open-mpi-1.6.tar.bz2
/usr/bin/tar xf /Library/Caches/Homebrew/open-mpi-1.6.tar.bz2
==> Using Homebrew-provided fortran compiler.
This may be changed by setting the FC environment variable.
 
==> ./configure --prefix=/usr/local/Cellar/open-mpi/1.6 --disable-dependency-tracking
./configure --prefix=/usr/local/Cellar/open-mpi/1.6 --disable-dependency-tracking
 
============================================================================
== Configuring Open MPI
============================================================================
 
*** Startup tests
checking build system type... x86_64-apple-darwin11.4.0
checking host system type... x86_64-apple-darwin11.4.0
checking target system type... x86_64-apple-darwin11.4.0
checking for gcc... /usr/bin/clang
checking whether the C compiler works... yes
checking for C compiler default output file name... a.out
checking for suffix of executables...
checking whether we are cross compiling... no
checking for suffix of object files... o
checking whether we are using the GNU C compiler... yes
checking whether /usr/bin/clang accepts -g... yes
checking for /usr/bin/clang option to accept ISO C89... none needed
checking how to run the C preprocessor... /usr/bin/clang -E
checking for grep that handles long lines and -e... /usr/bin/grep
checking for egrep... /usr/bin/grep -E
checking for ANSI C header files... yes
checking for sys/types.h... yes
checking for sys/stat.h... yes
checking for stdlib.h... yes
checking for string.h... yes
checking for memory.h... yes
checking for strings.h... yes
checking for inttypes.h... yes
checking for stdint.h... yes
checking for unistd.h... yes
checking minix/config.h usability... no
checking minix/config.h presence... no
checking for minix/config.h... no
checking whether it is safe to define __EXTENSIONS__... yes
checking for a BSD-compatible install... /usr/bin/install -c
checking whether build environment is sane... yes
checking for a thread-safe mkdir -p... config/install-sh -c -d
checking for gawk... gawk
checking whether make sets $(MAKE)... yes
checking for style of include used by make... GNU
checking how to create a ustar tar archive... gnutar
checking dependency style of /usr/bin/clang... none
checking whether make supports nested variables... yes
 
*** Checking versions
checking Open MPI version... 1.6
checking Open MPI release date... May 10, 2012
checking Open MPI Subversion repository version... r26429
checking Open MPI Run-Time Environment version... 1.6
checking Open MPI Run-Time Environment release date... May 10, 2012
checking Open MPI Run-Time Environment Subversion repository version... r26429
checking Open Portable Access Layer version... 1.6
checking Open Portable Access Layer release date... May 10, 2012
checking Open Portable Access Layer Subversion repository version... r26429
 
*** Initialization, setup
configure: builddir: /private/tmp/homebrew-open-mpi-1.6-trJD/openmpi-1.6
configure: srcdir: /private/tmp/homebrew-open-mpi-1.6-trJD/openmpi-1.6
installing to directory "/usr/local/Cellar/open-mpi/1.6"
 
*** OPAL Configuration options
checking if want to run code coverage... no
checking if want to compile with branch probabilities... no
checking if want to debug memory usage... no
checking if want to profile memory usage... no
checking if want developer-level compiler pickyness... no
checking if want developer-level debugging code... no
checking if want to install project-internal header files... no
checking if want pretty-print stacktrace... yes
checking if want pty support... yes
checking if want weak symbol support... yes
checking if want dlopen support... yes
checking if want heterogeneous support... no
checking if want trace file debugging... no
checking if want fault tolerance... Disabled fault tolerance
checking if want IPv6 support... no
checking if want package/brand string... Open MPI nibbles@iBlub.local Distribution
checking if want ident string... 1.6
checking if want to use an alternative checksum algo for messages... no
checking maximum length of processor name... 256
checking maximum length of error string... 256
checking maximum length of object name... 64
checking maximum length of info key... 36
checking maximum length of info val... 256
checking maximum length of port name... 1024
checking maximum length of datarep string... 128
 
*** ORTE Configuration options
checking if want full RTE support... yes
checking if want orterun "--prefix" behavior to be enabled by default... no
checking if want reliable multicast... no
 
*** OMPI Configuration options
checking if want compile-time warnings inside of mpi.h... no
checking if want sparse process groups... no
checking if want peruse support... no
checking if want Fortran 77 bindings... yes
checking if want Fortran 90 bindings... yes
checking Fortran 90 bindings "size"... small
checking if want PMPI... yes
checking if want C++ bindings... yes
checking if want MPI::SEEK_SET support... yes
checking if want run-time MPI parameter checking... runtime
checking max supported array dimension in F90 MPI bindings... 4
 
============================================================================
== Compiler and preprocessor tests
============================================================================
 
*** C compiler and preprocessor
checking for gcc... (cached) /usr/bin/clang
checking whether we are using the GNU C compiler... (cached) yes
checking whether /usr/bin/clang accepts -g... (cached) yes
checking for /usr/bin/clang option to accept ISO C89... (cached) none needed
checking whether /usr/bin/clang and cc understand -c and -o together... yes
checking for the C compiler vendor... gnu
checking for ANSI C header files... (cached) yes
checking if /usr/bin/clang supports -finline-functions... yes
checking if /usr/bin/clang supports -fno-strict-aliasing... yes
configure: WARNING: -fno-strict-aliasing has been added to CFLAGS
checking if /usr/bin/clang supports __builtin_expect... yes
checking if /usr/bin/clang supports __builtin_prefetch... yes
checking for C optimization flags... -DNDEBUG -g -O2 -finline-functions -fno-strict-aliasing
checking for Interix environment... no
checking for C ident string support... static const char
checking for int8_t... yes
checking for uint8_t... yes
checking for int16_t... yes
checking for uint16_t... yes
checking for int32_t... yes
checking for uint32_t... yes
checking for int64_t... yes
checking for uint64_t... yes
checking for int128_t... no
checking for uint128_t... no
checking for long long... yes
checking for long double... yes
checking for float _Complex... yes
checking for double _Complex... yes
checking for long double _Complex... yes
checking for intptr_t... yes
checking for uintptr_t... yes
checking for mode_t... yes
checking for ssize_t... yes
checking for ptrdiff_t... yes
checking size of char... 1
checking size of short... 2
checking size of int... 4
checking size of long... 8
checking size of long long... 8
checking size of float... 4
checking size of double... 8
checking size of long double... 16
checking size of float _Complex... 8
checking size of double _Complex... 16
checking size of long double _Complex... 32
checking size of void *... 8
checking size of size_t... 8
checking size of ssize_t... 8
checking size of ptrdiff_t... 8
checking size of wchar_t... 4
checking alignment of _Bool... 1
checking alignment of int8_t... 1
checking alignment of int16_t... 2
checking alignment of int32_t... 4
checking alignment of int64_t... 8
checking alignment of char... 1
checking alignment of short... 2
checking alignment of wchar_t... 4
checking alignment of int... 4
checking alignment of long... 8
checking alignment of long long... 8
checking alignment of float... 4
checking alignment of double... 8
checking alignment of long double... 16
checking alignment of float _Complex... 4
checking alignment of double _Complex... 8
checking alignment of long double _Complex... 16
checking alignment of void *... 8
checking for C bool type... no
checking size of _Bool... 1
checking for inline... __inline__
checking for C/C++ restrict keyword... __restrict
checking for weak symbol support... no
checking for functional offsetof macro... yes
 
*** C++ compiler and preprocessor
checking whether we are using the GNU C++ compiler... yes
checking whether /usr/bin/clang++ accepts -g... yes
checking dependency style of /usr/bin/clang++... none
checking how to run the C++ preprocessor... /usr/bin/clang++ -E
checking for the C++ compiler vendor... gnu
checking if /usr/bin/clang++ supports -finline-functions... yes
configure: WARNING: -finline-functions has been added to CXXFLAGS
checking if C and C++ are link compatible... yes
checking for C++ optimization flags... -O3 -DNDEBUG -finline-functions
checking size of bool... 1
checking alignment of bool... 1
 
*** C++ compiler and preprocessor
checking whether we are using the GNU C++ compiler... (cached) yes
checking whether /usr/bin/clang++ accepts -g... (cached) yes
checking dependency style of /usr/bin/clang++... (cached) none
checking how to run the C++ preprocessor... /usr/bin/clang++ -E
checking if C++ compiler works... yes
checking if /usr/bin/clang++ supports -finline-functions... yes
configure: WARNING: -finline-functions has been added to CXXFLAGS
checking if C and C++ are link compatible... (cached) yes
checking for C++ optimization flags... -O3 -DNDEBUG -finline-functions
checking size of bool... (cached) 1
checking alignment of bool... (cached) 1
checking if able to build the MPI C++ bindings... yes
checking for the C++ compiler vendor... (cached) gnu
checking if want C++ exception handling... no
checking for C++ template_repository_directory... not used
checking for C++ compiler template parameters... none needed
checking for C++ ident string support... static const char
checking if /usr/bin/clang++ supports __builtin_expect... yes
checking if /usr/bin/clang++ supports __builtin_prefetch... yes
checking if /usr/bin/clang++ supports const_cast<> properly... yes
 
*** Compiler characteristics
checking for __attribute__... yes
checking for __attribute__(aligned)... yes
checking for __attribute__(always_inline)... yes
checking for __attribute__(cold)... no
checking for __attribute__(const)... yes
checking for __attribute__(deprecated)... yes
checking for __attribute__(deprecated_argument)... yes
checking for __attribute__(format)... yes
checking for __attribute__(format_funcptr)... no
checking for __attribute__(hot)... no
checking for __attribute__(malloc)... yes
checking for __attribute__(may_alias)... yes
checking for __attribute__(no_instrument_function)... yes
checking for __attribute__(nonnull)... yes
checking for __attribute__(noreturn)... yes
checking for __attribute__(noreturn_funcptr)... yes
checking for __attribute__(packed)... yes
checking for __attribute__(pure)... yes
checking for __attribute__(sentinel)... yes
checking for __attribute__(unused)... yes
checking for __attribute__(visibility)... yes
checking for __attribute__(warn_unused_result)... yes
checking for __attribute__(weak_alias)... no
checking for compiler familyid... 1
checking for compiler familyname... GNU
checking for compiler version... 262657
checking for compiler version_str... 4.2.1
 
*** Assembler
checking dependency style of /usr/bin/clang... none
checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm
checking the name lister (/usr/bin/nm) interface... BSD nm
checking for fgrep... /usr/bin/grep -F
checking if need to remove -g from CCASFLAGS... no
checking whether to enable smp locks... yes
checking if .proc/endp is needed... yes
checking directive for setting text section... .text
checking directive for exporting symbols... .globl
checking for objdump... no
checking if .note.GNU-stack is needed... no
checking suffix for labels... :
checking prefix for global symbol labels... _
checking prefix for lsym labels... L
checking prefix for function in .type... @
checking if .size is needed... yes
checking if .align directive takes logarithmic value... yes
checking if /usr/bin/clang supports GCC inline assembly... yes
checking if /usr/bin/clang supports DEC inline assembly... no
checking if /usr/bin/clang supports XLC inline assembly... no
checking if /usr/bin/clang++ supports GCC inline assembly... yes
checking if /usr/bin/clang++ supports DEC inline assembly... no
checking if /usr/bin/clang++ supports XLC inline assembly... no
checking for assembly format... default-.text-.globl-:-_-L-@-1-1-1-1-0
checking for asssembly architecture... AMD64
checking for perl... perl
checking for pre-built assembly file... no (not in asm-data)
checking whether possible to generate assembly file... yes
checking for atomic assembly filename... atomic-local.s
 
*** Fortran 77 compiler
checking whether we are using the GNU Fortran 77 compiler... yes
checking whether /usr/local/bin/gfortran accepts -g... yes
 
*** Fortran 90/95 compiler
checking whether we are using the GNU Fortran compiler... yes
checking whether /usr/local/bin/gfortran accepts -g... yes
checking if Fortran 77 compiler works... yes
checking /usr/local/bin/gfortran external symbol convention... single underscore
checking if C and Fortran 77 are link compatible... yes
checking to see if F77 compiler likes the C++ exception flags... skipped (no C++ exceptions flags)
checking to see if mpif77/mpif90 compilers need additional linker flags... -Wl,-commons,use_dylibs
checking if Fortran 77 compiler supports CHARACTER... yes
checking size of Fortran 77 CHARACTER... 1
checking for C type corresponding to CHARACTER... char
checking alignment of Fortran CHARACTER... 1
checking if Fortran 77 compiler supports LOGICAL... yes
checking size of Fortran 77 LOGICAL... 4
checking for C type corresponding to LOGICAL... int
checking alignment of Fortran LOGICAL... 4
checking if Fortran 77 compiler supports LOGICAL*1... yes
checking size of Fortran 77 LOGICAL*1... 1
checking for C type corresponding to LOGICAL*1... char
checking alignment of Fortran LOGICAL*1... 1
checking if Fortran 77 compiler supports LOGICAL*2... yes
checking size of Fortran 77 LOGICAL*2... 2
checking for C type corresponding to LOGICAL*2... short
checking alignment of Fortran LOGICAL*2... 2
checking if Fortran 77 compiler supports LOGICAL*4... yes
checking size of Fortran 77 LOGICAL*4... 4
checking for C type corresponding to LOGICAL*4... int
checking alignment of Fortran LOGICAL*4... 4
checking if Fortran 77 compiler supports LOGICAL*8... yes
checking size of Fortran 77 LOGICAL*8... 8
checking for C type corresponding to LOGICAL*8... long long
checking alignment of Fortran LOGICAL*8... 8
checking if Fortran 77 compiler supports INTEGER... yes
checking size of Fortran 77 INTEGER... 4
checking for C type corresponding to INTEGER... int
checking alignment of Fortran INTEGER... 4
checking if Fortran 77 compiler supports INTEGER*1... yes
checking size of Fortran 77 INTEGER*1... 1
checking for C type corresponding to INTEGER*1... char
checking alignment of Fortran INTEGER*1... 1
checking if Fortran 77 compiler supports INTEGER*2... yes
checking size of Fortran 77 INTEGER*2... 2
checking for C type corresponding to INTEGER*2... short
checking alignment of Fortran INTEGER*2... 2
checking if Fortran 77 compiler supports INTEGER*4... yes
checking size of Fortran 77 INTEGER*4... 4
checking for C type corresponding to INTEGER*4... int
checking alignment of Fortran INTEGER*4... 4
checking if Fortran 77 compiler supports INTEGER*8... yes
checking size of Fortran 77 INTEGER*8... 8
checking for C type corresponding to INTEGER*8... long long
checking alignment of Fortran INTEGER*8... 8
checking if Fortran 77 compiler supports INTEGER*16... yes
checking size of Fortran 77 INTEGER*16... 16
checking for C type corresponding to INTEGER*16... not found
configure: WARNING: *** Did not find corresponding C type
checking if Fortran 77 compiler supports REAL... yes
checking size of Fortran 77 REAL... 4
checking for C type corresponding to REAL... float
checking alignment of Fortran REAL... 4
checking if Fortran 77 compiler supports REAL*2... no
checking if Fortran 77 compiler supports REAL*4... yes
checking size of Fortran 77 REAL*4... 4
checking for C type corresponding to REAL*4... float
checking alignment of Fortran REAL*4... 4
checking if Fortran 77 compiler supports REAL*8... yes
checking size of Fortran 77 REAL*8... 8
checking for C type corresponding to REAL*8... double
checking alignment of Fortran REAL*8... 8
checking if Fortran 77 compiler supports REAL*16... no
checking for C type matching bit representation of REAL*16... skipped (no REAL*16)
configure: WARNING: MPI_REAL16 and MPI_COMPLEX32 support have been disabled
checking if Fortran 77 compiler supports DOUBLE PRECISION... yes
checking size of Fortran 77 DOUBLE PRECISION... 8
checking for C type corresponding to DOUBLE PRECISION... double
checking alignment of Fortran DOUBLE PRECISION... 8
checking if Fortran 77 compiler supports COMPLEX... yes
checking size of Fortran 77 COMPLEX... 8
checking alignment of Fortran COMPLEX... 4
checking if Fortran 77 compiler supports DOUBLE COMPLEX... yes
checking size of Fortran 77 DOUBLE COMPLEX... 16
checking alignment of Fortran DOUBLE COMPLEX... 8
checking if Fortran 77 compiler supports COMPLEX*8... yes
checking size of Fortran 77 COMPLEX*8... 8
checking alignment of Fortran COMPLEX*8... 4
checking if Fortran 77 compiler supports COMPLEX*16... yes
checking size of Fortran 77 COMPLEX*16... 16
checking alignment of Fortran COMPLEX*16... 8
checking if Fortran 77 compiler supports COMPLEX*32... no
checking for max Fortran MPI handle index... ( 0x7fffffff < 2147483647 ? 0x7fffffff : 2147483647 )
checking Fortran value for .TRUE. logical type... 1
checking for correct handling of Fortran logical arrays... yes
checking for the value of MPI_STATUS_SIZE... 6 Fortran INTEGERs
checking if Fortran compiler works... yes
checking whether /usr/local/bin/gfortran and /usr/local/bin/gfortran compilers are compatible... yes
checking for extra arguments to build a shared library... impossible -- -static
checking for Fortran flag to compile .f files... none
checking for Fortran flag to compile .f90 files... none
checking to see if F90 compiler likes the C++ exception flags... skipped (no C++ exceptions flags)
checking for Fortran 90 compiler module include flag... -I
checking if Fortran 90 compiler supports CHARACTER... yes
checking size of Fortran 90 CHARACTER... 1
checking if Fortran 77 and 90 type sizes match... yes
checking if Fortran 90 compiler supports LOGICAL... yes
checking size of Fortran 90 LOGICAL... 4
checking if Fortran 77 and 90 type sizes match... yes
checking if Fortran 90 compiler supports LOGICAL*1... yes
checking size of Fortran 90 LOGICAL*1... 1
checking if Fortran 77 and 90 type sizes match... yes
checking if Fortran 90 compiler supports LOGICAL*2... yes
checking size of Fortran 90 LOGICAL*2... 2
checking if Fortran 77 and 90 type sizes match... yes
checking if Fortran 90 compiler supports LOGICAL*4... yes
checking size of Fortran 90 LOGICAL*4... 4
checking if Fortran 77 and 90 type sizes match... yes
checking if Fortran 90 compiler supports LOGICAL*8... yes
checking size of Fortran 90 LOGICAL*8... 8
checking if Fortran 77 and 90 type sizes match... yes
checking if Fortran 90 compiler supports INTEGER... yes
checking size of Fortran 90 INTEGER... 4
checking if Fortran 77 and 90 type sizes match... yes
checking if Fortran 90 compiler supports INTEGER*1... yes
checking size of Fortran 90 INTEGER*1... 1
checking if Fortran 77 and 90 type sizes match... yes
checking if Fortran 90 compiler supports INTEGER*2... yes
checking size of Fortran 90 INTEGER*2... 2
checking if Fortran 77 and 90 type sizes match... yes
checking if Fortran 90 compiler supports INTEGER*4... yes
checking size of Fortran 90 INTEGER*4... 4
checking if Fortran 77 and 90 type sizes match... yes
checking if Fortran 90 compiler supports INTEGER*8... yes
checking size of Fortran 90 INTEGER*8... 8
checking if Fortran 77 and 90 type sizes match... yes
checking if Fortran 90 compiler supports INTEGER*16... yes
checking size of Fortran 90 INTEGER*16... 16
configure: WARNING: *** Corresponding Fortran 77 type (INTEGER*16) not supported
configure: WARNING: *** Skipping Fortran 90 type (INTEGER*16)
checking if Fortran 90 compiler supports REAL... yes
checking size of Fortran 90 REAL... 4
checking if Fortran 77 and 90 type sizes match... yes
checking if Fortran 90 compiler supports REAL*2... no
checking if Fortran 90 compiler supports REAL*4... yes
checking size of Fortran 90 REAL*4... 4
checking if Fortran 77 and 90 type sizes match... yes
checking if Fortran 90 compiler supports REAL*8... yes
checking size of Fortran 90 REAL*8... 8
checking if Fortran 77 and 90 type sizes match... yes
checking if Fortran 90 compiler supports REAL*16... no
checking if Fortran 90 compiler supports DOUBLE PRECISION... yes
checking size of Fortran 90 DOUBLE PRECISION... 8
checking if Fortran 77 and 90 type sizes match... yes
checking if Fortran 90 compiler supports COMPLEX... yes
checking size of Fortran 90 COMPLEX... 8
checking if Fortran 77 and 90 type sizes match... yes
checking if Fortran 90 compiler supports COMPLEX*8... yes
checking size of Fortran 90 COMPLEX*8... 8
checking if Fortran 77 and 90 type sizes match... yes
checking if Fortran 90 compiler supports COMPLEX*16... yes
checking size of Fortran 90 COMPLEX*16... 16
checking if Fortran 77 and 90 type sizes match... yes
checking if Fortran 90 compiler supports COMPLEX*32... no
checking if Fortran 90 compiler supports DOUBLE COMPLEX... yes
checking size of Fortran 90 DOUBLE COMPLEX... 16
checking if Fortran 77 and 90 type sizes match... yes
checking Fortran 90 kind of MPI_INTEGER_KIND (selected_int_kind(9))... 4
checking Fortran 90 kind of MPI_ADDRESS_KIND (selected_int_kind(18))... 8
checking Fortran 90 kind of MPI_OFFSET_KIND (selected_int_kind(18))... (cached) 8
 
============================================================================
== Header file tests
============================================================================
checking alloca.h usability... yes
checking alloca.h presence... yes
checking for alloca.h... yes
checking aio.h usability... yes
checking aio.h presence... yes
checking for aio.h... yes
checking arpa/inet.h usability... yes
checking arpa/inet.h presence... yes
checking for arpa/inet.h... yes
checking dirent.h usability... yes
checking dirent.h presence... yes
checking for dirent.h... yes
checking dlfcn.h usability... yes
checking dlfcn.h presence... yes
checking for dlfcn.h... yes
checking execinfo.h usability... yes
checking execinfo.h presence... yes
checking for execinfo.h... yes
checking err.h usability... yes
checking err.h presence... yes
checking for err.h... yes
checking fcntl.h usability... yes
checking fcntl.h presence... yes
checking for fcntl.h... yes
checking grp.h usability... yes
checking grp.h presence... yes
checking for grp.h... yes
checking for inttypes.h... (cached) yes
checking libgen.h usability... yes
checking libgen.h presence... yes
checking for libgen.h... yes
checking libutil.h usability... no
checking libutil.h presence... no
checking for libutil.h... no
checking for memory.h... (cached) yes
checking netdb.h usability... yes
checking netdb.h presence... yes
checking for netdb.h... yes
checking netinet/in.h usability... yes
checking netinet/in.h presence... yes
checking for netinet/in.h... yes
checking netinet/tcp.h usability... yes
checking netinet/tcp.h presence... yes
checking for netinet/tcp.h... yes
checking poll.h usability... yes
checking poll.h presence... yes
checking for poll.h... yes
checking pthread.h usability... yes
checking pthread.h presence... yes
checking for pthread.h... yes
checking pty.h usability... no
checking pty.h presence... no
checking for pty.h... no
checking pwd.h usability... yes
checking pwd.h presence... yes
checking for pwd.h... yes
checking sched.h usability... yes
checking sched.h presence... yes
checking for sched.h... yes
checking for stdint.h... (cached) yes
checking stddef.h usability... yes
checking stddef.h presence... yes
checking for stddef.h... yes
checking for stdlib.h... (cached) yes
checking for string.h... (cached) yes
checking for strings.h... (cached) yes
checking stropts.h usability... no
checking stropts.h presence... no
checking for stropts.h... no
checking sys/fcntl.h usability... yes
checking sys/fcntl.h presence... yes
checking for sys/fcntl.h... yes
checking sys/ipc.h usability... yes
checking sys/ipc.h presence... yes
checking for sys/ipc.h... yes
checking sys/shm.h usability... yes
checking sys/shm.h presence... yes
checking for sys/shm.h... yes
checking sys/ioctl.h usability... yes
checking sys/ioctl.h presence... yes
checking for sys/ioctl.h... yes
checking sys/mman.h usability... yes
checking sys/mman.h presence... yes
checking for sys/mman.h... yes
checking sys/mount.h usability... yes
checking sys/mount.h presence... yes
checking for sys/mount.h... yes
checking sys/param.h usability... yes
checking sys/param.h presence... yes
checking for sys/param.h... yes
checking sys/queue.h usability... yes
checking sys/queue.h presence... yes
checking for sys/queue.h... yes
checking sys/resource.h usability... yes
checking sys/resource.h presence... yes
checking for sys/resource.h... yes
checking sys/select.h usability... yes
checking sys/select.h presence... yes
checking for sys/select.h... yes
checking sys/socket.h usability... yes
checking sys/socket.h presence... yes
checking for sys/socket.h... yes
checking sys/sockio.h usability... yes
checking sys/sockio.h presence... yes
checking for sys/sockio.h... yes
checking stdarg.h usability... yes
checking stdarg.h presence... yes
checking for stdarg.h... yes
checking for sys/stat.h... (cached) yes
checking sys/statfs.h usability... no
checking sys/statfs.h presence... no
checking for sys/statfs.h... no
checking sys/statvfs.h usability... yes
checking sys/statvfs.h presence... yes
checking for sys/statvfs.h... yes
checking sys/time.h usability... yes
checking sys/time.h presence... yes
checking for sys/time.h... yes
checking sys/tree.h usability... no
checking sys/tree.h presence... no
checking for sys/tree.h... no
checking for sys/types.h... (cached) yes
checking sys/uio.h usability... yes
checking sys/uio.h presence... yes
checking for sys/uio.h... yes
checking net/uio.h usability... no
checking net/uio.h presence... no
checking for net/uio.h... no
checking sys/utsname.h usability... yes
checking sys/utsname.h presence... yes
checking for sys/utsname.h... yes
checking sys/vfs.h usability... no
checking sys/vfs.h presence... no
checking for sys/vfs.h... no
checking sys/wait.h usability... yes
checking sys/wait.h presence... yes
checking for sys/wait.h... yes
checking syslog.h usability... yes
checking syslog.h presence... yes
checking for syslog.h... yes
checking time.h usability... yes
checking time.h presence... yes
checking for time.h... yes
checking termios.h usability... yes
checking termios.h presence... yes
checking for termios.h... yes
checking ulimit.h usability... yes
checking ulimit.h presence... yes
checking for ulimit.h... yes
checking for unistd.h... (cached) yes
checking util.h usability... yes
checking util.h presence... yes
checking for util.h... yes
checking utmp.h usability... yes
checking utmp.h presence... yes
checking for utmp.h... yes
checking malloc.h usability... no
checking malloc.h presence... no
checking for malloc.h... no
checking ifaddrs.h usability... yes
checking ifaddrs.h presence... yes
checking for ifaddrs.h... yes
checking sys/sysctl.h usability... yes
checking sys/sysctl.h presence... yes
checking for sys/sysctl.h... yes
checking crt_externs.h usability... yes
checking crt_externs.h presence... yes
checking for crt_externs.h... yes
checking regex.h usability... yes
checking regex.h presence... yes
checking for regex.h... yes
checking ioLib.h usability... no
checking ioLib.h presence... no
checking for ioLib.h... no
checking sockLib.h usability... no
checking sockLib.h presence... no
checking for sockLib.h... no
checking hostLib.h usability... no
checking hostLib.h presence... no
checking for hostLib.h... no
checking shlwapi.h usability... no
checking shlwapi.h presence... no
checking for shlwapi.h... no
checking sys/synch.h usability... no
checking sys/synch.h presence... no
checking for sys/synch.h... no
checking for net/if.h... yes
checking stdbool.h usability... yes
checking stdbool.h presence... yes
checking for stdbool.h... yes
checking if <stdbool.h> works... yes
 
============================================================================
== Type tests
============================================================================
checking size of pid_t... 4
checking for socklen_t... yes
checking for struct sockaddr_in... yes
checking for struct sockaddr_in6... yes
checking for struct sockaddr_storage... yes
checking whether AF_UNSPEC is declared... yes
checking whether PF_UNSPEC is declared... yes
checking whether AF_INET6 is declared... yes
checking whether PF_INET6 is declared... yes
checking if SA_RESTART defined in signal.h... yes
checking for struct sockaddr.sa_len... yes
checking for struct dirent.d_type... yes
checking for siginfo_t.si_fd... no
checking for siginfo_t.si_band... yes
 
============================================================================
== Library and Function tests
============================================================================
checking if we need -lutil for openpty... no
checking for openpty... yes
checking for gethostbyname in -lnsl... no
checking for socket in -lsocket... no
checking if we need -lrt for sched_yield... no
checking for sched_yield... yes
checking if we need -lgen for dirname... no
checking for dirname... yes
checking if we need -lm for ceil... no
checking for ceil... yes
checking for asprintf... yes
checking for snprintf... yes
checking for vasprintf... yes
checking for vsnprintf... yes
checking for openpty... (cached) yes
checking for isatty... yes
checking for getpwuid... yes
checking for fork... yes
checking for waitpid... yes
checking for execve... yes
checking for pipe... yes
checking for ptsname... yes
checking for setsid... yes
checking for mmap... yes
checking for tcgetpgrp... yes
checking for posix_memalign... yes
checking for strsignal... yes
checking for sysconf... yes
checking for syslog... yes
checking for regcmp... no
checking for regexec... yes
checking for regfree... yes
checking for _NSGetEnviron... yes
checking for socketpair... yes
checking for strncpy_s... no
checking for _strdup... no
checking for usleep... yes
checking for mkfifo... yes
checking for htonl define... yes
checking for htonl... yes
checking whether va_copy is declared... yes
checking whether __va_copy is declared... yes
checking whether __func__ is declared... yes
 
============================================================================
== System-specific tests
============================================================================
checking checking for type of MPI_Offset... long long
checking checking for an MPI datatype for MPI_Offset... MPI_LONG_LONG
checking for _SC_NPROCESSORS_ONLN... yes
checking whether byte ordering is bigendian... no
checking for broken qsort... no
checking if word-sized integers must be word-size aligned... no
checking if C compiler and POSIX threads work as is... yes
checking if C++ compiler and POSIX threads work as is... yes
checking if F77 compiler and POSIX threads work as is... yes
checking for PTHREAD_MUTEX_ERRORCHECK_NP... no
checking for PTHREAD_MUTEX_ERRORCHECK... yes
checking for working POSIX threads package... yes
checking if C compiler and Solaris threads work... no
checking if C++ compiler and Solaris threads work... no
checking if F77 compiler and Solaris threads work... no
checking for working Solaris threads package... no
checking for type of thread support... posix
checking if threads have different pids (pthreads on linux)... no
checking if want OPAL thread support... undef
checking if want fault tolerance thread... Disabled (fault tolerance disabled --without-ft)
checking if want MPI_THREAD_MULTIPLE support... Disabled
checking whether ln -s works... yes
checking for grep that handles long lines and -e... (cached) /usr/bin/grep
checking for egrep... (cached) /usr/bin/grep -E
checking dependency style of /usr/bin/clang... (cached) none
checking for flex... flex
checking lex output file root... lex.yy
checking lex library... -lfl
checking whether yytext is a pointer... yes
checking for flavor of ps to use... ps -A -o command,pid,user
checking if build filesystem is case sensitive... no
checking if configuring for case sensitive filesystem... no
 
*******************************************************************************
NOTE NOTE NOTE NOTE NOTE NOTE NOTE NOTE NOTE NOTE NOTE NOTE NOTE NOTE NOTE NOTE
*******************************************************************************
 
Because OPAL is being installed on a non-case sensitive file
system, the C++ wrapper compiler will be named opalc++ instead of the
traditional opalCC.
 
Please update any makefiles appropriately.
 
*******************************************************************************
NOTE NOTE NOTE NOTE NOTE NOTE NOTE NOTE NOTE NOTE NOTE NOTE NOTE NOTE NOTE NOTE
*******************************************************************************
 
checking whether RLIMIT_NPROC is declared... yes
checking whether RLIMIT_MEMLOCK is declared... yes
 
============================================================================
== Modular Component Architecture (MCA) setup
============================================================================
checking for subdir args... '--prefix=/usr/local/Cellar/open-mpi/1.6' '--disable-dependency-tracking' 'CC=/usr/bin/clang' 'CXX=/usr/bin/clang++' 'F77=/usr/local/bin/gfortran' 'FFLAGS=-march=core2 -msse4' 'FC=/usr/local/bin/gfortran' 'FCFLAGS=-march=core2 -msse4'
checking for pkg-config... /usr/local/bin/pkg-config
checking pkg-config is at least version 0.9.0... yes
==> Pre-emptively configuring the hwloc framework to satisfy dependencies.
 
+++ Configuring MCA framework hwloc
checking for no configure components in framework hwloc...
checking for m4 configure components in framework hwloc... hwloc132, external
 
--- MCA component hwloc:hwloc132 (m4 configuration macro)
checking for MCA component hwloc:hwloc132 compile mode... static
checking hwloc building mode... embedded
configure: hwloc builddir: /private/tmp/homebrew-open-mpi-1.6-trJD/openmpi-1.6/opal/mca/hwloc/hwloc132/hwloc
configure: hwloc srcdir: /private/tmp/homebrew-open-mpi-1.6-trJD/openmpi-1.6/opal/mca/hwloc/hwloc132/hwloc
checking if want hwloc maintainer support... disabled (embedded mode)
checking for hwloc directory prefix... opal/mca/hwloc/hwloc132/hwloc/
checking for hwloc symbol prefix... opal_hwloc132_
checking size of void *... (cached) 8
checking which OS support to include... Darwin
checking which CPU support to include... x86_64
checking size of unsigned long... 8
checking size of unsigned int... 4
checking for the C compiler vendor... gnu
checking for __attribute__... yes
checking for __attribute__(aligned)... yes
checking for __attribute__(always_inline)... yes
checking for __attribute__(cold)... no
checking for __attribute__(const)... yes
checking for __attribute__(deprecated)... yes
checking for __attribute__(format)... yes
checking for __attribute__(hot)... no
checking for __attribute__(malloc)... yes
checking for __attribute__(may_alias)... yes
checking for __attribute__(no_instrument_function)... yes
checking for __attribute__(nonnull)... yes
checking for __attribute__(noreturn)... yes
checking for __attribute__(packed)... yes
checking for __attribute__(pure)... yes
checking for __attribute__(sentinel)... yes
checking for __attribute__(unused)... yes
checking for __attribute__(warn_unused_result)... yes
checking for __attribute__(weak_alias)... no
checking if /usr/bin/clang supports -fvisibility=hidden... yes
checking whether to enable symbol visibility... yes (via -fvisibility=hidden)
configure: WARNING: "-fvisibility=hidden" has been added to the hwloc CFLAGS
checking whether the C compiler rejects function calls with too many arguments... yes
checking whether the C compiler rejects function calls with too few arguments... yes
checking for strncasecmp... yes
checking whether function strncasecmp is declared... yes
checking for strftime... yes
checking for setlocale... yes
checking for stdint.h... (cached) yes
checking for sys/mman.h... (cached) yes
checking for KAFFINITY... no
checking for PROCESSOR_CACHE_TYPE... no
checking for CACHE_DESCRIPTOR... no
checking for LOGICAL_PROCESSOR_RELATIONSHIP... no
checking for RelationProcessorPackage... no
checking for SYSTEM_LOGICAL_PROCESSOR_INFORMATION... no
checking for GROUP_AFFINITY... no
checking for PROCESSOR_RELATIONSHIP... no
checking for NUMA_NODE_RELATIONSHIP... no
checking for CACHE_RELATIONSHIP... no
checking for PROCESSOR_GROUP_INFO... no
checking for GROUP_RELATIONSHIP... no
checking for SYSTEM_LOGICAL_PROCESSOR_INFORMATION_EX... no
checking for PSAPI_WORKING_SET_EX_BLOCK... no
checking for PSAPI_WORKING_SET_EX_INFORMATION... no
checking for main in -lgdi32... no
checking windows.h usability... no
checking windows.h presence... no
checking for windows.h... no
checking sys/lgrp_user.h usability... no
checking sys/lgrp_user.h presence... no
checking for sys/lgrp_user.h... no
checking kstat.h usability... no
checking kstat.h presence... no
checking for kstat.h... no
checking for fabsf in -lm... yes
checking whether _SC_NPROCESSORS_ONLN is declared... yes
checking whether _SC_NPROCESSORS_CONF is declared... yes
checking whether _SC_NPROC_ONLN is declared... no
checking whether _SC_NPROC_CONF is declared... no
checking whether _SC_LARGE_PAGESIZE is declared... no
checking mach/mach_host.h usability... yes
checking mach/mach_host.h presence... yes
checking for mach/mach_host.h... yes
checking mach/mach_init.h usability... yes
checking mach/mach_init.h presence... yes
checking for mach/mach_init.h... yes
checking for host_info... yes
checking for sys/param.h... (cached) yes
checking for sys/sysctl.h... (cached) yes
checking whether CTL_HW is declared... yes
checking whether HW_NCPU is declared... yes
checking for sysctl... yes
checking for sysctlbyname... yes
checking for pthread_t... yes
checking whether function sched_setaffinity is declared... no
checking for working CPU_SET... no
checking for working CPU_SET_S... no
checking for working _syscall3... no
checking for KERRIGHED... no
checking for lib... no
checking for bash... /bin/sh
checking for ffs... yes
checking whether function ffs is declared... yes
checking for ffsl... yes
checking whether function ffsl is declared... yes
checking for fls... yes
checking whether function fls is declared... yes
checking for flsl... yes
checking whether function flsl is declared... yes
checking for clz... no
checking for clzl... no
checking for openat... no
checking for malloc.h... (cached) no
checking for getpagesize... yes
checking for memalign... no
checking for posix_memalign... (cached) yes
checking for sys/utsname.h... (cached) yes
checking for uname... yes
checking pthread_np.h usability... no
checking pthread_np.h presence... no
checking for pthread_np.h... no
checking whether pthread_setaffinity_np is declared... no
checking whether pthread_getaffinity_np is declared... no
checking for sched_setaffinity... no
checking for sys/cpuset.h... no
checking for library containing pthread_getthrds_np... no
checking numaif.h usability... no
checking numaif.h presence... no
checking for numaif.h... no
checking for cpuid... yes
checking whether hwloc configure succeeded... yes
checking if MCA component hwloc:hwloc132 can compile... yes
 
--- MCA component hwloc:external (m4 configuration macro)
checking for MCA component hwloc:external compile mode... static
checking if MCA component hwloc:external can compile... no
checking for winning hwloc component header file... opal/mca/hwloc/hwloc132/hwloc132.h
checking for winning hwloc component additional CPPFLAGS... -I/private/tmp/homebrew-open-mpi-1.6-trJD/openmpi-1.6/opal/mca/hwloc/hwloc132/hwloc/include
checking for winning hwloc component additional LDFLAGS... none
checking for winning hwloc component additional LIBS... none
checking for winning hwloc component additional wrapper CPPFLAGS... none
checking for winning hwloc component additional wrapper LDFLAGS... none
checking for winning hwloc component additional wrapper LIBS... -lm
<== Pre-emptive hwloc framework configuration complete.
<== We now return you to your regularly scheduled programming.
checking __NetBSD__... no
checking __FreeBSD__... no
checking __OpenBSD__... no
checking __DragonFly__... no
checking __386BSD__... no
checking __bsdi__... no
checking __APPLE__... yes
checking __linux__... no
checking __sun__... no
checking for struct sockaddr_in... (cached) yes
checking which components should be disabled...
checking which components should be direct-linked into the library...
checking which components should be run-time loadable... all
checking which components should be static... none
checking for projects containing MCA frameworks... opal, orte, ompi
 
*** Configuring MCA for opal
checking for frameworks for opal... backtrace, carto, crs, hwloc, installdirs, maffinity, memchecker, memcpy, memory, paffinity, pstat, shmem, sysinfo, timer
 
+++ Configuring MCA framework backtrace
checking for no configure components in framework backtrace...
checking for m4 configure components in framework backtrace... execinfo, printstack, darwin, none
 
--- MCA component backtrace:execinfo (m4 configuration macro)
checking for MCA component backtrace:execinfo compile mode... static
checking for execinfo.h... (cached) yes
checking if we need -lexecinfo for backtrace... no
checking for backtrace... yes
checking if MCA component backtrace:execinfo can compile... yes
 
--- MCA component backtrace:printstack (m4 configuration macro)
checking for MCA component backtrace:printstack compile mode... static
checking ucontext.h usability... no
checking ucontext.h presence... no
checking for ucontext.h... no
checking for printstack... no
checking if MCA component backtrace:printstack can compile... no
 
--- MCA component backtrace:darwin (m4 configuration macro)
checking for MCA component backtrace:darwin compile mode... static
checking for vm_read_overwrite... yes
checking if MCA component backtrace:darwin can compile... no
 
--- MCA component backtrace:none (m4 configuration macro)
checking for MCA component backtrace:none compile mode... static
checking if MCA component backtrace:none can compile... no
 
+++ Configuring MCA framework carto
checking for no configure components in framework carto... auto_detect, file
checking for m4 configure components in framework carto...
 
--- MCA component carto:auto_detect (no configuration)
checking for MCA component carto:auto_detect compile mode... dso
checking if MCA component carto:auto_detect can compile... yes
 
--- MCA component carto:file (no configuration)
checking for MCA component carto:file compile mode... dso
checking if MCA component carto:file can compile... yes
 
+++ Configuring MCA framework crs
checking for no configure components in framework crs... none
checking for m4 configure components in framework crs... blcr, self
 
--- MCA component crs:none (no configuration)
checking for MCA component crs:none compile mode... dso
checking if MCA component crs:none can compile... yes
 
--- MCA component crs:blcr (m4 configuration macro)
checking for MCA component crs:blcr compile mode... dso
checking --with-blcr value... simple ok (unspecified)
checking --with-blcr-libdir value... simple ok (unspecified)
checking if MCA component crs:blcr can compile... no
 
--- MCA component crs:self (m4 configuration macro)
checking for MCA component crs:self compile mode... dso
checking if MCA component crs:self can compile... no
 
+++ Configuring MCA framework installdirs
checking for no configure components in framework installdirs...
checking for m4 configure components in framework installdirs... env, config, windows
 
--- MCA component installdirs:env (m4 configuration macro)
checking for MCA component installdirs:env compile mode... static
checking if MCA component installdirs:env can compile... yes
 
--- MCA component installdirs:config (m4 configuration macro)
checking for MCA component installdirs:config compile mode... static
checking if MCA component installdirs:config can compile... yes
 
--- MCA component installdirs:windows (m4 configuration macro)
checking for MCA component installdirs:windows compile mode... static
checking for working RegOpenKeyEx... no
checking if MCA component installdirs:windows can compile... no
 
+++ Configuring MCA framework maffinity
checking for no configure components in framework maffinity... first_use
checking for m4 configure components in framework maffinity... hwloc
 
--- MCA component maffinity:first_use (no configuration)
checking for MCA component maffinity:first_use compile mode... dso
checking if MCA component maffinity:first_use can compile... yes
 
--- MCA component maffinity:hwloc (m4 configuration macro)
checking for MCA component maffinity:hwloc compile mode... dso
checking if hwloc is enabled... yes
checking if MCA component maffinity:hwloc can compile... yes
 
+++ Pre-configuring the framework memchecker
checking if --enable-memchecker was specified... no (adding "memchecker" to --enable-mca-no-build list)
 
+++ Configuring MCA framework memchecker
checking for no configure components in framework memchecker...
checking for m4 configure components in framework memchecker... valgrind
 
--- MCA component memchecker:valgrind (m4 configuration macro)
checking for MCA component memchecker:valgrind compile mode... static
checking --with-valgrind value... simple ok (unspecified)
checking valgrind/valgrind.h usability... no
checking valgrind/valgrind.h presence... no
checking for valgrind/valgrind.h... no
configure: WARNING: valgrind.h not found
configure: WARNING: Cannot compile this component
checking if MCA component memchecker:valgrind can compile... no
 
+++ Configuring MCA framework memcpy
checking for no configure components in framework memcpy...
checking for m4 configure components in framework memcpy...
 
+++ Configuring MCA framework memory
checking for no configure components in framework memory...
checking for m4 configure components in framework memory... linux, malloc_solaris
 
--- MCA component memory:linux (m4 configuration macro)
checking for MCA component memory:linux compile mode... static
checking operating system... x86_64-apple-darwin11.4.0 -- unsupported
checking for malloc.h... (cached) no
checking linux/ummunotify.h usability... no
checking linux/ummunotify.h presence... no
checking for linux/ummunotify.h... no
checking for stropts.h... (cached) no
checking if MCA component memory:linux can compile... no
 
--- MCA component memory:malloc_solaris (m4 configuration macro)
checking for MCA component memory:malloc_solaris compile mode... static
checking for Solaris... no
checking if MCA component memory:malloc_solaris can compile... no
 
+++ Configuring MCA framework paffinity
checking for no configure components in framework paffinity...
checking for m4 configure components in framework paffinity... hwloc, test
 
--- MCA component paffinity:hwloc (m4 configuration macro)
checking for MCA component paffinity:hwloc compile mode... dso
checking if hwloc is enabled... yes
checking if MCA component paffinity:hwloc can compile... yes
 
--- MCA component paffinity:test (m4 configuration macro)
checking for MCA component paffinity:test compile mode... dso
checking if this is an --enable-debug build... no (component disabled)
checking if MCA component paffinity:test can compile... no
 
+++ Configuring MCA framework pstat
checking for no configure components in framework pstat...
checking for m4 configure components in framework pstat... linux, darwin
 
--- MCA component pstat:linux (m4 configuration macro)
checking for MCA component pstat:linux compile mode... dso
checking if MCA component pstat:linux can compile... no
 
--- MCA component pstat:darwin (m4 configuration macro)
checking for MCA component pstat:darwin compile mode... dso
checking for mach/mach_host.h... (cached) yes
checking if MCA component pstat:darwin can compile... yes
 
+++ Configuring MCA framework shmem
checking for no configure components in framework shmem...
checking for m4 configure components in framework shmem... mmap, posix, sysv, windows
 
--- MCA component shmem:mmap (m4 configuration macro)
checking for MCA component shmem:mmap compile mode... dso
checking if want mmap shared memory support... yes
checking for library containing mmap... none required
checking if MCA component shmem:mmap can compile... yes
 
--- MCA component shmem:posix (m4 configuration macro)
checking for MCA component shmem:posix compile mode... dso
checking if want POSIX shared memory support... yes
checking for library containing shm_open... none required
checking if MCA component shmem:posix can compile... yes
 
--- MCA component shmem:sysv (m4 configuration macro)
checking for MCA component shmem:sysv compile mode... dso
checking if want SYSV shared memory support... yes
checking for shmget... yes
checking if MCA component shmem:sysv can compile... yes
 
--- MCA component shmem:windows (m4 configuration macro)
checking for MCA component shmem:windows compile mode... dso
checking if want Windows shared memory support... yes
checking for CreateFileMapping... no
checking if MCA component shmem:windows can compile... no
 
+++ Configuring MCA framework sysinfo
checking for no configure components in framework sysinfo...
checking for m4 configure components in framework sysinfo... linux, solaris, darwin
 
--- MCA component sysinfo:linux (m4 configuration macro)
checking for MCA component sysinfo:linux compile mode... dso
checking if we are on Linux... no
checking if MCA component sysinfo:linux can compile... no
 
--- MCA component sysinfo:solaris (m4 configuration macro)
checking for MCA component sysinfo:solaris compile mode... dso
configure: *** Open MPI does not support solaris sysinfo on this platform
checking if MCA component sysinfo:solaris can compile... no
 
--- MCA component sysinfo:darwin (m4 configuration macro)
checking for MCA component sysinfo:darwin compile mode... dso
checking for mach/mach_host.h... (cached) yes
checking if MCA component sysinfo:darwin can compile... yes
 
+++ Configuring MCA framework timer
checking for no configure components in framework timer...
checking for m4 configure components in framework timer... altix, catamount, aix, darwin, solaris, windows, linux
 
--- MCA component timer:altix (m4 configuration macro)
checking for MCA component timer:altix compile mode... static
checking sn/mmtimer.h usability... no
checking sn/mmtimer.h presence... no
checking for sn/mmtimer.h... no
checking if MCA component timer:altix can compile... no
 
--- MCA component timer:catamount (m4 configuration macro)
checking for MCA component timer:catamount compile mode... static
checking catamount/dclock.h usability... no
checking catamount/dclock.h presence... no
checking for catamount/dclock.h... no
checking if MCA component timer:catamount can compile... no
 
--- MCA component timer:aix (m4 configuration macro)
checking for MCA component timer:aix compile mode... static
checking for time_base_to_time... no
checking if MCA component timer:aix can compile... no
 
--- MCA component timer:darwin (m4 configuration macro)
checking for MCA component timer:darwin compile mode... static
checking mach/mach_time.h usability... yes
checking mach/mach_time.h presence... yes
checking for mach/mach_time.h... yes
checking for mach_absolute_time... yes
checking if MCA component timer:darwin can compile... yes
 
--- MCA component timer:solaris (m4 configuration macro)
checking for MCA component timer:solaris compile mode... static
checking for gethrtime... no
checking if MCA component timer:solaris can compile... no
 
--- MCA component timer:windows (m4 configuration macro)
checking for MCA component timer:windows compile mode... static
checking if MCA component timer:windows can compile... no
 
--- MCA component timer:linux (m4 configuration macro)
checking for MCA component timer:linux compile mode... static
checking if MCA component timer:linux can compile... no
 
*** Configuring MCA for orte
checking for frameworks for orte... errmgr, ess, filem, grpcomm, iof, notifier, odls, oob, plm, ras, rmaps, rmcast, rml, routed, snapc
 
+++ Configuring MCA framework errmgr
checking for no configure components in framework errmgr... default
checking for m4 configure components in framework errmgr...
 
--- MCA component errmgr:default (no configuration)
checking for MCA component errmgr:default compile mode... dso
checking if MCA component errmgr:default can compile... yes
 
+++ Configuring MCA framework ess
checking for no configure components in framework ess...
checking for m4 configure components in framework ess... portals_utcp, cnos, alps, env, hnp, lsf, pmi, singleton, slave, slurm, slurmd, tm, tool
 
--- MCA component ess:portals_utcp (m4 configuration macro)
checking for MCA component ess:portals_utcp compile mode... dso
checking --with-portals value... simple ok (unspecified)
checking for PtlGetRank... no
checking if MCA component ess:portals_utcp can compile... no
 
--- MCA component ess:cnos (m4 configuration macro)
checking for MCA component ess:cnos compile mode... dso
checking for cnos_get_rank... no
checking if MCA component ess:cnos can compile... no
 
--- MCA component ess:alps (m4 configuration macro)
checking for MCA component ess:alps compile mode... dso
checking for catamount/cnos_mpi_os.h... no
checking for cnos_mpi_os.h... no
checking if MCA component ess:alps can compile... no
 
--- MCA component ess:env (m4 configuration macro)
checking for MCA component ess:env compile mode... dso
checking if MCA component ess:env can compile... yes
 
--- MCA component ess:hnp (m4 configuration macro)
checking for MCA component ess:hnp compile mode... dso
checking if MCA component ess:hnp can compile... yes
 
--- MCA component ess:lsf (m4 configuration macro)
checking for MCA component ess:lsf compile mode... dso
checking --with-lsf value... simple ok (unspecified)
checking --with-lsf-libdir value... simple ok (unspecified)
checking for LSF dir... compiler default
checking for LSF library dir... linker default
checking lsf/lsbatch.h usability... no
checking lsf/lsbatch.h presence... no
checking for lsf/lsbatch.h... no
checking if MCA component ess:lsf can compile... no
 
--- MCA component ess:pmi (m4 configuration macro)
checking for MCA component ess:pmi compile mode... dso
checking if user requested PMI support... no
checking if MCA component ess:pmi can compile... no
 
--- MCA component ess:singleton (m4 configuration macro)
checking for MCA component ess:singleton compile mode... dso
checking if MCA component ess:singleton can compile... yes
 
--- MCA component ess:slave (m4 configuration macro)
checking for MCA component ess:slave compile mode... dso
checking if MCA component ess:slave can compile... yes
 
--- MCA component ess:slurm (m4 configuration macro)
checking for MCA component ess:slurm compile mode... dso
checking for fork... (cached) yes
checking for execve... (cached) yes
checking for setpgid... yes
checking if MCA component ess:slurm can compile... yes
 
--- MCA component ess:slurmd (m4 configuration macro)
checking for MCA component ess:slurmd compile mode... dso
checking for fork... (cached) yes
checking for execve... (cached) yes
checking for setpgid... (cached) yes
checking if MCA component ess:slurmd can compile... yes
 
--- MCA component ess:tm (m4 configuration macro)
checking for MCA component ess:tm compile mode... dso
checking --with-tm value... simple ok (unspecified)
checking for pbs-config... not found
checking tm.h usability... no
checking tm.h presence... no
checking for tm.h... no
checking if MCA component ess:tm can compile... no
 
--- MCA component ess:tool (m4 configuration macro)
checking for MCA component ess:tool compile mode... dso
checking if MCA component ess:tool can compile... yes
 
+++ Configuring MCA framework filem
checking for no configure components in framework filem... rsh
checking for m4 configure components in framework filem...
 
--- MCA component filem:rsh (no configuration)
checking for MCA component filem:rsh compile mode... dso
checking if MCA component filem:rsh can compile... yes
 
+++ Configuring MCA framework grpcomm
checking for no configure components in framework grpcomm...
checking for m4 configure components in framework grpcomm... cnos, bad, basic, hier, pmi
 
--- MCA component grpcomm:cnos (m4 configuration macro)
checking for MCA component grpcomm:cnos compile mode... dso
checking for cnos_barrier... no
checking if MCA component grpcomm:cnos can compile... no
 
--- MCA component grpcomm:bad (m4 configuration macro)
checking for MCA component grpcomm:bad compile mode... dso
checking if MCA component grpcomm:bad can compile... yes
 
--- MCA component grpcomm:basic (m4 configuration macro)
checking for MCA component grpcomm:basic compile mode... dso
checking if MCA component grpcomm:basic can compile... yes
 
--- MCA component grpcomm:hier (m4 configuration macro)
checking for MCA component grpcomm:hier compile mode... dso
checking if MCA component grpcomm:hier can compile... yes
 
--- MCA component grpcomm:pmi (m4 configuration macro)
checking for MCA component grpcomm:pmi compile mode... dso
checking if user requested PMI support... no
checking if MCA component grpcomm:pmi can compile... no
 
+++ Configuring MCA framework iof
checking for no configure components in framework iof... hnp, orted, tool
checking for m4 configure components in framework iof...
 
--- MCA component iof:hnp (no configuration)
checking for MCA component iof:hnp compile mode... dso
checking if MCA component iof:hnp can compile... yes
 
--- MCA component iof:orted (no configuration)
checking for MCA component iof:orted compile mode... dso
checking if MCA component iof:orted can compile... yes
 
--- MCA component iof:tool (no configuration)
checking for MCA component iof:tool compile mode... dso
checking if MCA component iof:tool can compile... yes
 
+++ Configuring MCA framework notifier
checking for no configure components in framework notifier...
checking for m4 configure components in framework notifier... command, ftb, smtp, syslog
 
--- MCA component notifier:command (m4 configuration macro)
checking for MCA component notifier:command compile mode... dso
checking for fork... (cached) yes
checking for pipe... (cached) yes
checking if MCA component notifier:command can compile... yes
 
--- MCA component notifier:ftb (m4 configuration macro)
checking for MCA component notifier:ftb compile mode... dso
checking libftb.h usability... no
checking libftb.h presence... no
checking for libftb.h... no
checking if MCA component notifier:ftb can compile... no
 
--- MCA component notifier:smtp (m4 configuration macro)
checking for MCA component notifier:smtp compile mode... dso
checking --with-esmtp value... simple ok (unspecified)
checking --with-esmtp-libdir value... simple ok (unspecified)
checking libesmtp.h usability... no
checking libesmtp.h presence... no
checking for libesmtp.h... no
checking if MCA component notifier:smtp can compile... no
 
--- MCA component notifier:syslog (m4 configuration macro)
checking for MCA component notifier:syslog compile mode... dso
checking if MCA component notifier:syslog can compile... yes
 
+++ Configuring MCA framework odls
checking for no configure components in framework odls...
checking for m4 configure components in framework odls... default, process
 
--- MCA component odls:default (m4 configuration macro)
checking for MCA component odls:default compile mode... dso
checking for fork... (cached) yes
checking if MCA component odls:default can compile... yes
 
--- MCA component odls:process (m4 configuration macro)
checking for MCA component odls:process compile mode... dso
checking for CreateProcess... no
checking if MCA component odls:process can compile... no
 
+++ Configuring MCA framework oob
checking for no configure components in framework oob...
checking for m4 configure components in framework oob... tcp
 
--- MCA component oob:tcp (m4 configuration macro)
checking for MCA component oob:tcp compile mode... dso
checking for struct sockaddr_in... (cached) yes
checking if MCA component oob:tcp can compile... yes
 
+++ Configuring MCA framework plm
checking for no configure components in framework plm...
checking for m4 configure components in framework plm... alps, ccp, lsf, process, rsh, slurm, tm
 
--- MCA component plm:alps (m4 configuration macro)
checking for MCA component plm:alps compile mode... dso
checking if MCA component plm:alps can compile... no
 
--- MCA component plm:ccp (m4 configuration macro)
checking for MCA component plm:ccp compile mode... dso
checking if MCA component plm:ccp can compile... no
 
--- MCA component plm:lsf (m4 configuration macro)
checking for MCA component plm:lsf compile mode... dso
checking --with-lsf value... simple ok (unspecified)
checking --with-lsf-libdir value... simple ok (unspecified)
checking for LSF dir... compiler default
checking for LSF library dir... linker default
checking lsf/lsbatch.h usability... no
checking lsf/lsbatch.h presence... no
checking for lsf/lsbatch.h... no
checking if MCA component plm:lsf can compile... no
 
--- MCA component plm:process (m4 configuration macro)
checking for MCA component plm:process compile mode... dso
checking if MCA component plm:process can compile... no
 
--- MCA component plm:rsh (m4 configuration macro)
checking for MCA component plm:rsh compile mode... dso
checking for fork... (cached) yes
checking if MCA component plm:rsh can compile... yes
 
--- MCA component plm:slurm (m4 configuration macro)
checking for MCA component plm:slurm compile mode... dso
checking for fork... (cached) yes
checking for execve... (cached) yes
checking for setpgid... (cached) yes
checking if MCA component plm:slurm can compile... yes
 
--- MCA component plm:tm (m4 configuration macro)
checking for MCA component plm:tm compile mode... dso
checking --with-tm value... simple ok (unspecified)
checking for pbs-config... not found
checking tm.h usability... no
checking tm.h presence... no
checking for tm.h... no
checking if MCA component plm:tm can compile... no
 
+++ Configuring MCA framework ras
checking for no configure components in framework ras... cm
checking for m4 configure components in framework ras... alps, ccp, gridengine, loadleveler, lsf, slurm, tm
 
--- MCA component ras:cm (no configuration)
checking for MCA component ras:cm compile mode... dso
checking if MCA component ras:cm can compile... yes
 
--- MCA component ras:alps (m4 configuration macro)
checking for MCA component ras:alps compile mode... dso
checking if MCA component ras:alps can compile... no
 
--- MCA component ras:ccp (m4 configuration macro)
checking for MCA component ras:ccp compile mode... dso
checking if MCA component ras:ccp can compile... no
 
--- MCA component ras:gridengine (m4 configuration macro)
checking for MCA component ras:gridengine compile mode... dso
checking if user requested SGE build... not specified; checking environment
checking for qrsh... no
checking for SGE_ROOT environment variable... not found
checking if MCA component ras:gridengine can compile... no
 
--- MCA component ras:loadleveler (m4 configuration macro)
checking for MCA component ras:loadleveler compile mode... dso
checking if MCA component ras:loadleveler can compile... no
 
--- MCA component ras:lsf (m4 configuration macro)
checking for MCA component ras:lsf compile mode... dso
checking --with-lsf value... simple ok (unspecified)
checking --with-lsf-libdir value... simple ok (unspecified)
checking for LSF dir... compiler default
checking for LSF library dir... linker default
checking lsf/lsbatch.h usability... no
checking lsf/lsbatch.h presence... no
checking for lsf/lsbatch.h... no
checking if MCA component ras:lsf can compile... no
 
--- MCA component ras:slurm (m4 configuration macro)
checking for MCA component ras:slurm compile mode... dso
checking for fork... (cached) yes
checking for execve... (cached) yes
checking for setpgid... (cached) yes
checking if MCA component ras:slurm can compile... yes
 
--- MCA component ras:tm (m4 configuration macro)
checking for MCA component ras:tm compile mode... dso
checking --with-tm value... simple ok (unspecified)
checking for pbs-config... not found
checking tm.h usability... no
checking tm.h presence... no
checking for tm.h... no
checking if MCA component ras:tm can compile... no
 
+++ Configuring MCA framework rmaps
checking for no configure components in framework rmaps... load_balance, rank_file, resilient, round_robin, seq, topo
checking for m4 configure components in framework rmaps...
 
--- MCA component rmaps:load_balance (no configuration)
checking for MCA component rmaps:load_balance compile mode... dso
checking if MCA component rmaps:load_balance can compile... yes
 
--- MCA component rmaps:rank_file (no configuration)
checking for MCA component rmaps:rank_file compile mode... dso
checking if MCA component rmaps:rank_file can compile... yes
 
--- MCA component rmaps:resilient (no configuration)
checking for MCA component rmaps:resilient compile mode... dso
checking if MCA component rmaps:resilient can compile... yes
 
--- MCA component rmaps:round_robin (no configuration)
checking for MCA component rmaps:round_robin compile mode... dso
checking if MCA component rmaps:round_robin can compile... yes
 
--- MCA component rmaps:seq (no configuration)
checking for MCA component rmaps:seq compile mode... dso
checking if MCA component rmaps:seq can compile... yes
 
--- MCA component rmaps:topo (no configuration)
checking for MCA component rmaps:topo compile mode... dso
checking if MCA component rmaps:topo can compile... yes
 
+++ Configuring MCA framework rmcast
checking for no configure components in framework rmcast... tcp, udp
checking for m4 configure components in framework rmcast...
 
--- MCA component rmcast:tcp (no configuration)
checking for MCA component rmcast:tcp compile mode... dso
checking if MCA component rmcast:tcp can compile... yes
 
--- MCA component rmcast:udp (no configuration)
checking for MCA component rmcast:udp compile mode... dso
checking if MCA component rmcast:udp can compile... yes
 
+++ Configuring MCA framework rml
checking for no configure components in framework rml... oob
checking for m4 configure components in framework rml... ftrm
 
--- MCA component rml:oob (no configuration)
checking for MCA component rml:oob compile mode... dso
checking if MCA component rml:oob can compile... yes
 
--- MCA component rml:ftrm (m4 configuration macro)
checking for MCA component rml:ftrm compile mode... dso
checking if MCA component rml:ftrm can compile... no
 
+++ Configuring MCA framework routed
checking for no configure components in framework routed... binomial, cm, direct, linear, radix, slave
checking for m4 configure components in framework routed...
 
--- MCA component routed:binomial (no configuration)
checking for MCA component routed:binomial compile mode... dso
checking if MCA component routed:binomial can compile... yes
 
--- MCA component routed:cm (no configuration)
checking for MCA component routed:cm compile mode... dso
checking if MCA component routed:cm can compile... yes
 
--- MCA component routed:direct (no configuration)
checking for MCA component routed:direct compile mode... dso
checking if MCA component routed:direct can compile... yes
 
--- MCA component routed:linear (no configuration)
checking for MCA component routed:linear compile mode... dso
checking if MCA component routed:linear can compile... yes
 
--- MCA component routed:radix (no configuration)
checking for MCA component routed:radix compile mode... dso
checking if MCA component routed:radix can compile... yes
 
--- MCA component routed:slave (no configuration)
checking for MCA component routed:slave compile mode... dso
checking if MCA component routed:slave can compile... yes
 
+++ Configuring MCA framework snapc
checking for no configure components in framework snapc...
checking for m4 configure components in framework snapc... full
 
--- MCA component snapc:full (m4 configuration macro)
checking for MCA component snapc:full compile mode... dso
checking if MCA component snapc:full can compile... no
 
*** Configuring MCA for ompi
checking for frameworks for ompi... allocator, bml, btl, coll, common, crcp, dpm, io, mpool, mtl, op, osc, pml, pubsub, rcache, topo
 
+++ Configuring MCA framework allocator
checking for no configure components in framework allocator... basic, bucket
checking for m4 configure components in framework allocator...
 
--- MCA component allocator:basic (no configuration)
checking for MCA component allocator:basic compile mode... dso
checking if MCA component allocator:basic can compile... yes
 
--- MCA component allocator:bucket (no configuration)
checking for MCA component allocator:bucket compile mode... dso
checking if MCA component allocator:bucket can compile... yes
 
+++ Configuring MCA framework bml
checking for no configure components in framework bml... r2
checking for m4 configure components in framework bml...
 
--- MCA component bml:r2 (no configuration)
checking for MCA component bml:r2 compile mode... dso
checking if MCA component bml:r2 can compile... yes
 
+++ Configuring MCA framework btl
checking for no configure components in framework btl... self
checking for m4 configure components in framework btl... elan, mx, ofud, openib, portals, sctp, sm, tcp, udapl
 
--- MCA component btl:self (no configuration)
checking for MCA component btl:self compile mode... dso
checking if MCA component btl:self can compile... yes
 
--- MCA component btl:elan (m4 configuration macro)
checking for MCA component btl:elan compile mode... dso
checking --with-elan value... simple ok (unspecified)
checking --with-elan-libdir value... simple ok (unspecified)
checking elan/elan.h usability... no
checking elan/elan.h presence... no
checking for elan/elan.h... no
checking if MCA component btl:elan can compile... no
 
--- MCA component btl:mx (m4 configuration macro)
checking for MCA component btl:mx compile mode... dso
checking --with-mx value... simple ok (unspecified)
checking --with-mx-libdir value... simple ok (unspecified)
checking myriexpress.h usability... no
checking myriexpress.h presence... no
checking for myriexpress.h... no
checking if MCA component btl:mx can compile... no
 
--- MCA component btl:ofud (m4 configuration macro)
checking for MCA component btl:ofud compile mode... dso
checking --with-openib value... simple ok (unspecified)
checking --with-openib-libdir value... simple ok (unspecified)
checking if want to add padding to the openib control header... no
checking for fcntl.h... (cached) yes
checking sys/poll.h usability... yes
checking sys/poll.h presence... yes
checking for sys/poll.h... yes
checking infiniband/verbs.h usability... no
checking infiniband/verbs.h presence... no
checking for infiniband/verbs.h... no
checking if ConnectX XRC support is enabled... no
checking if dynamic SL is enabled... no
checking if OpenFabrics RDMACM support is enabled... no
checking if MCA component btl:ofud can compile... no
 
--- MCA component btl:openib (m4 configuration macro)
checking for MCA component btl:openib compile mode... dso
checking --with-openib value... simple ok (unspecified)
checking --with-openib-libdir value... simple ok (unspecified)
checking if want to add padding to the openib control header... no
checking for fcntl.h... (cached) yes
checking for sys/poll.h... (cached) yes
checking infiniband/verbs.h usability... no
checking infiniband/verbs.h presence... no
checking for infiniband/verbs.h... no
checking if ConnectX XRC support is enabled... no
checking if dynamic SL is enabled... no
checking if OpenFabrics RDMACM support is enabled... no
checking for thread support (needed for rdmacm)... posix
no
checking if MCA component btl:openib can compile... no
 
--- MCA component btl:portals (m4 configuration macro)
checking for MCA component btl:portals compile mode... dso
checking --with-portals value... simple ok (unspecified)
checking for Portals configuration... utcp
checking portals3.h usability... no
checking portals3.h presence... no
checking for portals3.h... no
checking for catamount/cnos_mpi_os.h... (cached) no
checking for cnos_mpi_os.h... (cached) no
checking if MCA component btl:portals can compile... no
 
--- MCA component btl:sctp (m4 configuration macro)
checking for MCA component btl:sctp compile mode... dso
checking --with-sctp value... simple ok (unspecified)
configure: WARNING: Adding -DFREEBSD to set extra sin_len field in sockaddr.
checking --with-sctp-libdir value... simple ok (unspecified)
checking netinet/sctp.h usability... no
checking netinet/sctp.h presence... no
checking for netinet/sctp.h... no
checking if MCA component btl:sctp can compile... no
 
--- MCA component btl:sm (m4 configuration macro)
checking for MCA component btl:sm compile mode... dso
checking --with-knem value... simple ok (unspecified)
checking knem_io.h usability... no
checking knem_io.h presence... no
checking for knem_io.h... no
checking if MCA component btl:sm can compile... yes
 
--- MCA component btl:tcp (m4 configuration macro)
checking for MCA component btl:tcp compile mode... dso
checking for struct sockaddr_in... (cached) yes
checking if MCA component btl:tcp can compile... yes
 
--- MCA component btl:udapl (m4 configuration macro)
checking for MCA component btl:udapl compile mode... dso
checking --with-udapl value... simple ok (unspecified)
checking --with-udapl-libdir value... simple ok (unspecified)
checking dat/udat.h usability... no
checking dat/udat.h presence... no
checking for dat/udat.h... no
checking if MCA component btl:udapl can compile... no
 
+++ Configuring MCA framework coll
checking for no configure components in framework coll... basic, hierarch, inter, self, sm, sync, tuned
checking for m4 configure components in framework coll... fca
 
--- MCA component coll:basic (no configuration)
checking for MCA component coll:basic compile mode... dso
checking if MCA component coll:basic can compile... yes
 
--- MCA component coll:hierarch (no configuration)
checking for MCA component coll:hierarch compile mode... dso
checking if MCA component coll:hierarch can compile... yes
 
--- MCA component coll:inter (no configuration)
checking for MCA component coll:inter compile mode... dso
checking if MCA component coll:inter can compile... yes
 
--- MCA component coll:self (no configuration)
checking for MCA component coll:self compile mode... dso
checking if MCA component coll:self can compile... yes
 
--- MCA component coll:sm (no configuration)
checking for MCA component coll:sm compile mode... dso
checking if MCA component coll:sm can compile... yes
 
--- MCA component coll:sync (no configuration)
checking for MCA component coll:sync compile mode... dso
checking if MCA component coll:sync can compile... yes
 
--- MCA component coll:tuned (no configuration)
checking for MCA component coll:tuned compile mode... dso
checking if MCA component coll:tuned can compile... yes
 
--- MCA component coll:fca (m4 configuration macro)
checking for MCA component coll:fca compile mode... dso
checking --with-fca value... simple ok (unspecified)
checking if MCA component coll:fca can compile... no
 
+++ Configuring MCA framework common
checking for no configure components in framework common... sm
checking for m4 configure components in framework common... mx, portals
 
--- MCA component common:sm (no configuration)
checking for MCA component common:sm compile mode... dso
checking if MCA component common:sm can compile... yes
 
--- MCA component common:mx (m4 configuration macro)
checking for MCA component common:mx compile mode... dso
checking --with-mx value... simple ok (unspecified)
checking --with-mx-libdir value... simple ok (unspecified)
checking myriexpress.h usability... no
checking myriexpress.h presence... no
checking for myriexpress.h... no
checking if MCA component common:mx can compile... no
 
--- MCA component common:portals (m4 configuration macro)
checking for MCA component common:portals compile mode... dso
checking --with-portals value... simple ok (unspecified)
checking for Portals configuration... utcp
checking for portals3.h... (cached) no
checking if MCA component common:portals can compile... no
 
+++ Configuring MCA framework crcp
checking for no configure components in framework crcp...
checking for m4 configure components in framework crcp... bkmrk
 
--- MCA component crcp:bkmrk (m4 configuration macro)
checking for MCA component crcp:bkmrk compile mode... dso
checking if MCA component crcp:bkmrk can compile... no
 
+++ Configuring MCA framework dpm
checking for no configure components in framework dpm... orte
checking for m4 configure components in framework dpm...
 
--- MCA component dpm:orte (no configuration)
checking for MCA component dpm:orte compile mode... dso
checking if MCA component dpm:orte can compile... yes
 
+++ Configuring MCA framework io
checking for no configure components in framework io...
checking for m4 configure components in framework io... romio
 
--- MCA component io:romio (m4 configuration macro)
checking for MCA component io:romio compile mode... dso
checking if want ROMIO component... yes
checking if MPI profiling is enabled... yes
 
*** Configuring ROMIO distribution
configure: OMPI configuring in ompi/mca/io/romio/romio
configure: running /bin/sh './configure' CFLAGS="-DNDEBUG -g -O2 -finline-functions -fno-strict-aliasing " CPPFLAGS=" -D_REENTRANT -I/private/tmp/homebrew-open-mpi-1.6-trJD/openmpi-1.6/opal/mca/hwloc/hwloc132/hwloc/include -I/usr/include/infiniband -I/usr/include/infiniband" FFLAGS="-march=core2 -msse4" LDFLAGS=" " --enable-shared --disable-static --prefix=/usr/local/Cellar/open-mpi/1.6 --with-mpi=open_mpi --disable-aio --cache-file=/dev/null --srcdir=. --disable-option-checking
Configuring with args CFLAGS=-DNDEBUG -g -O2 -finline-functions -fno-strict-aliasing CPPFLAGS= -D_REENTRANT -I/private/tmp/homebrew-open-mpi-1.6-trJD/openmpi-1.6/opal/mca/hwloc/hwloc132/hwloc/include -I/usr/include/infiniband -I/usr/include/infiniband FFLAGS=-march=core2 -msse4 LDFLAGS= --enable-shared --disable-static --prefix=/usr/local/Cellar/open-mpi/1.6 --with-mpi=open_mpi --disable-aio --cache-file=/dev/null --srcdir=. --disable-option-checking
checking for Open MPI support files... in Open MPI source tree -- good
checking for make... make
checking whether clock skew breaks make... no
checking whether make supports include... yes
checking whether make allows comments in actions... yes
checking for virtual path format... VPATH
checking whether make sets CFLAGS... yes
checking for a BSD-compatible install... /usr/bin/install -c
checking whether build environment is sane... yes
checking for a thread-safe mkdir -p... confdb/install-sh -c -d
checking for gawk... gawk
checking whether make supports nested variables... yes
checking for architecture... Darwin
configure: WARNING: Unknown architecture ... proceeding anyway
ROMIO home directory is /private/tmp/homebrew-open-mpi-1.6-trJD/openmpi-1.6/ompi/mca/io/romio/romio
checking for ranlib... ranlib
checking for style of include used by make... GNU
checking whether the C compiler works... yes
checking for C compiler default output file name... a.out
checking for suffix of executables...
checking whether we are cross compiling... no
checking for suffix of object files... o
checking whether we are using the GNU C compiler... yes
checking whether /usr/bin/clang accepts -g... yes
checking for /usr/bin/clang option to accept ISO C89... none needed
checking dependency style of /usr/bin/clang... gcc3
checking for memalign... no
checking how to run the C preprocessor... /usr/bin/clang -E
checking for grep that handles long lines and -e... /usr/bin/grep
checking for egrep... /usr/bin/grep -E
checking for ANSI C header files... yes
checking for sys/types.h... yes
checking for sys/stat.h... yes
checking for stdlib.h... yes
checking for string.h... yes
checking for memory.h... yes
checking for strings.h... yes
checking for inttypes.h... yes
checking for stdint.h... yes
checking for unistd.h... yes
checking for unistd.h... (cached) yes
checking fcntl.h usability... yes
checking fcntl.h presence... yes
checking for fcntl.h... yes
checking malloc.h usability... no
checking malloc.h presence... no
checking for malloc.h... no
checking stddef.h usability... yes
checking stddef.h presence... yes
checking for stddef.h... yes
checking for sys/types.h... (cached) yes
checking for u_char... yes
checking for u_short... yes
checking for u_int... yes
checking for u_long... yes
checking sys/attr.h usability... yes
checking sys/attr.h presence... yes
checking for sys/attr.h... yes
checking size of int... 4
checking size of void *... 8
checking for int large enough for pointers... no
checking size of long long... 8
checking whether struct flock compatible with MPI_Offset... yes
checking for pvfs2-config... notfound
checking configured file systems... testfs ufs nfs
configure: WARNING: File locks may not work with NFS. See the Installation and
users manual for instructions on testing and if necessary fixing this
checking sys/vfs.h usability... no
checking sys/vfs.h presence... no
checking for sys/vfs.h... no
checking sys/param.h usability... yes
checking sys/param.h presence... yes
checking for sys/param.h... yes
checking sys/mount.h usability... yes
checking sys/mount.h presence... yes
checking for sys/mount.h... yes
checking sys/statvfs.h usability... yes
checking sys/statvfs.h presence... yes
checking for sys/statvfs.h... yes
checking whether struct statfs properly defined... yes
checking for f_fstypename member of statfs structure... yes
checking for sys/stat.h... (cached) yes
checking for sys/types.h... (cached) yes
checking for unistd.h... (cached) yes
checking for stat... yes
checking for st_fstype member of stat structure... no
checking for sys/types.h... (cached) yes
checking for sys/statvfs.h... (cached) yes
checking for sys/vfs.h... (cached) no
checking for statvfs... yes
checking for f_basetype member of statvfs structure... no
checking for unistd.h... (cached) yes
checking for large file defines... no
checking for strerror... yes
checking for doctext... no
checking for strdup... yes
checking whether strdup needs a declaration... yes
checking for snprintf... yes
checking whether snprintf needs a declaration... no
checking for lstat... yes
checking whether lstat needs a declaration... yes
checking for readlink... yes
checking whether readlink needs a declaration... no
checking for fsync... yes
checking whether fsync needs a declaration... no
checking for ftruncate... yes
checking whether ftruncate needs a declaration... no
checking for lseek64... no
checking for unistd.h... (cached) yes
checking for large file defines... none
setting SYSDEP_INC to
checking for C/C++ restrict keyword... __restrict
checking whether __attribute__ allowed... yes
checking whether __attribute__((format)) allowed... yes
checking build system type... x86_64-apple-darwin11.4.0
checking host system type... x86_64-apple-darwin11.4.0
checking how to print strings... printf
checking for a sed that does not truncate output... /usr/local/bin/gsed
checking for fgrep... /usr/bin/grep -F
checking for ld used by /usr/bin/clang... /usr/bin/clang
checking if the linker (/usr/bin/clang) is GNU ld... no
checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm
checking the name lister (/usr/bin/nm) interface... BSD nm
checking whether ln -s works... yes
checking the maximum length of command line arguments... 196608
checking whether the shell understands some XSI constructs... yes
checking whether the shell understands "+="... yes
checking how to convert x86_64-apple-darwin11.4.0 file names to x86_64-apple-darwin11.4.0 format... func_convert_file_noop
checking how to convert x86_64-apple-darwin11.4.0 file names to toolchain format... func_convert_file_noop
checking for /usr/bin/clang option to reload object files... -r
checking for objdump... no
checking how to recognize dependent libraries... pass_all
checking for dlltool... no
checking how to associate runtime and link libraries... printf %s\n
checking for ar... ar
checking for archiver @FILE support... no
checking for strip... strip
checking for ranlib... (cached) ranlib
checking command to parse /usr/bin/nm output from /usr/bin/clang object... ok
checking for sysroot... no
checking for mt... no
checking if : is a manifest tool... no
checking for dsymutil... dsymutil
checking for nmedit... nmedit
checking for lipo... lipo
checking for otool... otool
checking for otool64... no
checking for -single_module linker flag... yes
checking for -exported_symbols_list linker flag... yes
checking for -force_load linker flag... yes
checking for dlfcn.h... yes
checking for objdir... .libs
checking if /usr/bin/clang supports -fno-rtti -fno-exceptions... yes
checking for /usr/bin/clang option to produce PIC... -fno-common -DPIC
checking if /usr/bin/clang PIC flag -fno-common -DPIC works... yes
checking if /usr/bin/clang static flag -static works... no
checking if /usr/bin/clang supports -c -o file.o... yes
checking if /usr/bin/clang supports -c -o file.o... (cached) yes
checking whether the /usr/bin/clang linker (/usr/bin/clang) supports shared libraries... yes
checking dynamic linker characteristics... darwin11.4.0 dyld
checking how to hardcode library paths into programs... immediate
checking whether stripping libraries is possible... yes
checking if libtool supports shared libraries... yes
checking whether to build shared libraries... yes
checking whether to build static libraries... no
checking if libtool supports shared libraries... yes
checking whether to build shared libraries... yes
checking whether to build static libraries... no
checking for : option to produce PIC...
checking if : static flag works... no
checking if : supports -c -o file.o... no
checking if : supports -c -o file.o... (cached) no
checking whether the : linker (/usr/bin/clang) supports shared libraries... no
checking dynamic linker characteristics... darwin11.4.0 dyld
checking how to hardcode library paths into programs... immediate
setting CC to /usr/bin/clang
setting F77 to :
setting TEST_CC to mpicc
setting TEST_F77 to mpif77
setting CFLAGS to -DNDEBUG -g -O2 -finline-functions -fno-strict-aliasing -DHAVE_ROMIOCONF_H -DHAVE_ROMIOCONF_H
setting USER_CFLAGS to
setting USER_FFLAGS to
configure: creating ./config.status
config.status: creating Makefile
config.status: creating localdefs
config.status: creating adio/Makefile
config.status: creating adio/ad_bgl/Makefile
config.status: creating adio/ad_bglockless/Makefile
config.status: creating adio/ad_gridftp/Makefile
config.status: creating adio/ad_lustre/Makefile
config.status: creating adio/ad_nfs/Makefile
config.status: creating adio/ad_ntfs/Makefile
config.status: creating adio/ad_panfs/Makefile
config.status: creating adio/ad_pfs/Makefile
config.status: creating adio/ad_pvfs/Makefile
config.status: creating adio/ad_pvfs2/Makefile
config.status: creating adio/ad_sfs/Makefile
config.status: creating adio/ad_testfs/Makefile
config.status: creating adio/ad_ufs/Makefile
config.status: creating adio/ad_xfs/Makefile
config.status: creating adio/ad_zoidfs/Makefile
config.status: creating adio/common/Makefile
config.status: creating adio/include/Makefile
config.status: creating doc/Makefile
config.status: creating include/mpio.h
config.status: creating include/mpiof.h
config.status: creating include/Makefile
config.status: creating mpi-io/Makefile
config.status: creating test/Makefile
config.status: creating test/misc.c
config.status: creating test/large_file.c
config.status: creating test/fmisc.f
config.status: creating test/fcoll_test.f
config.status: creating test/pfcoll_test.f
config.status: creating test/fperf.f
config.status: creating test/runtests
config.status: creating util/romioinstall
config.status: creating mpi-io/glue/openmpi/Makefile
config.status: creating util/Makefile
config.status: creating adio/include/romioconf.h
config.status: executing depfiles commands
config.status: executing libtool commands
config.status: executing default-1 commands
configure: /bin/sh './configure' succeeded for ompi/mca/io/romio/romio
ROMIO distribution configured successfully
checking if MCA component io:romio can compile... yes
 
+++ Configuring MCA framework mpool
checking for no configure components in framework mpool... fake, rdma, sm
checking for m4 configure components in framework mpool...
 
--- MCA component mpool:fake (no configuration)
checking for MCA component mpool:fake compile mode... dso
checking if MCA component mpool:fake can compile... yes
 
--- MCA component mpool:rdma (no configuration)
checking for MCA component mpool:rdma compile mode... dso
checking if MCA component mpool:rdma can compile... yes
 
--- MCA component mpool:sm (no configuration)
checking for MCA component mpool:sm compile mode... dso
checking if MCA component mpool:sm can compile... yes
 
+++ Configuring MCA framework mtl
checking for no configure components in framework mtl...
checking for m4 configure components in framework mtl... mx, mxm, portals, psm
 
--- MCA component mtl:mx (m4 configuration macro)
checking for MCA component mtl:mx compile mode... dso
checking --with-mx value... simple ok (unspecified)
checking --with-mx-libdir value... simple ok (unspecified)
checking myriexpress.h usability... no
checking myriexpress.h presence... no
checking for myriexpress.h... no
checking if MCA component mtl:mx can compile... no
 
--- MCA component mtl:mxm (m4 configuration macro)
checking for MCA component mtl:mxm compile mode... dso
checking --with-mxm value... simple ok (unspecified)
checking --with-mxm-libdir value... simple ok (unspecified)
checking mxm/api/mxm_api.h usability... no
checking mxm/api/mxm_api.h presence... no
checking for mxm/api/mxm_api.h... no
checking if MCA component mtl:mxm can compile... no
 
--- MCA component mtl:portals (m4 configuration macro)
checking for MCA component mtl:portals compile mode... dso
checking --with-portals value... simple ok (unspecified)
checking for Portals configuration... utcp
checking for portals3.h... (cached) no
checking if MCA component mtl:portals can compile... no
 
--- MCA component mtl:psm (m4 configuration macro)
checking for MCA component mtl:psm compile mode... dso
checking --with-psm value... simple ok (unspecified)
checking --with-psm-libdir value... simple ok (unspecified)
checking psm.h usability... no
checking psm.h presence... no
checking for psm.h... no
checking if MCA component mtl:psm can compile... no
 
+++ Configuring MCA framework op
checking for no configure components in framework op...
checking for m4 configure components in framework op...
 
+++ Configuring MCA framework osc
checking for no configure components in framework osc... pt2pt, rdma
checking for m4 configure components in framework osc...
 
--- MCA component osc:pt2pt (no configuration)
checking for MCA component osc:pt2pt compile mode... dso
checking if MCA component osc:pt2pt can compile... yes
 
--- MCA component osc:rdma (no configuration)
checking for MCA component osc:rdma compile mode... dso
checking if MCA component osc:rdma can compile... yes
 
+++ Configuring MCA framework pml
checking for no configure components in framework pml... bfo, cm, csum, ob1
checking for m4 configure components in framework pml... crcpw, v
 
--- MCA component pml:bfo (no configuration)
checking for MCA component pml:bfo compile mode... dso
checking if MCA component pml:bfo can compile... yes
 
--- MCA component pml:cm (no configuration)
checking for MCA component pml:cm compile mode... dso
checking if MCA component pml:cm can compile... yes
 
--- MCA component pml:csum (no configuration)
checking for MCA component pml:csum compile mode... dso
checking if MCA component pml:csum can compile... yes
 
--- MCA component pml:ob1 (no configuration)
checking for MCA component pml:ob1 compile mode... dso
checking if MCA component pml:ob1 can compile... yes
 
--- MCA component pml:crcpw (m4 configuration macro)
checking for MCA component pml:crcpw compile mode... dso
checking if MCA component pml:crcpw can compile... no
 
--- MCA component pml:v (m4 configuration macro)
checking for MCA component pml:v compile mode... dso
 
+++ Configuring MCA framework vprotocol
checking for no configure components in framework vprotocol... pessimist
checking for m4 configure components in framework vprotocol...
 
--- MCA component vprotocol:pessimist (no configuration)
checking for MCA component vprotocol:pessimist compile mode... dso
checking if MCA component vprotocol:pessimist can compile... yes
checking if MCA component pml:v can compile... yes
 
+++ Configuring MCA framework pubsub
checking for no configure components in framework pubsub... orte
checking for m4 configure components in framework pubsub... pmi
 
--- MCA component pubsub:orte (no configuration)
checking for MCA component pubsub:orte compile mode... dso
checking if MCA component pubsub:orte can compile... yes
 
--- MCA component pubsub:pmi (m4 configuration macro)
checking for MCA component pubsub:pmi compile mode... dso
checking if user requested PMI support... no
checking if MCA component pubsub:pmi can compile... no
 
+++ Configuring MCA framework rcache
checking for no configure components in framework rcache... vma
checking for m4 configure components in framework rcache...
 
--- MCA component rcache:vma (no configuration)
checking for MCA component rcache:vma compile mode... dso
checking if MCA component rcache:vma can compile... yes
 
+++ Configuring MCA framework topo
checking for no configure components in framework topo... unity
checking for m4 configure components in framework topo...
 
--- MCA component topo:unity (no configuration)
checking for MCA component topo:unity compile mode... dso
checking if MCA component topo:unity can compile... yes
 
============================================================================
== Extended MPI interfaces setup
============================================================================
checking which extension components should be enabled...
checking for projects containing EXT frameworks... ompi
 
*** Configuring EXT for ompi
checking for frameworks for ompi... mpiext
 
+++ Configuring EXT framework mpiext
checking for no configure components in framework mpiext...
checking for m4 configure components in framework mpiext... affinity, example
 
--- EXT component mpiext:affinity (m4 configuration macro)
checking if EXT component mpiext:affinity can compile... no
 
--- EXT component mpiext:example (m4 configuration macro)
checking if EXT component mpiext:example can compile... no
 
============================================================================
== Contributed software setup
============================================================================
 
*** Configuring contributed software packages
checking which contributed software packages should be disabled...
 
--- libompitrace (m4 configuration macro)
checking if contributed component libompitrace can compile... yes
 
--- vt (m4 configuration macro)
checking whether PMPI is enabled... yes
checking whether C++ STL is suitable for vt... yes
configure: OMPI configuring in ompi/contrib/vt/vt
configure: running /bin/sh './configure' --disable-option-checking --with-openmpi-inside '--prefix=/usr/local/Cellar/open-mpi/1.6' '--disable-dependency-tracking' 'CC=/usr/bin/clang' 'CXX=/usr/bin/clang++' 'F77=/usr/local/bin/gfortran' 'FFLAGS=-march=core2 -msse4' 'FC=/usr/local/bin/gfortran' 'FCFLAGS=-march=core2 -msse4' --cache-file=/dev/null --srcdir=. --disable-option-checking
checking for a BSD-compatible install... /usr/bin/install -c
checking whether build environment is sane... yes
checking for a thread-safe mkdir -p... config/install-sh -c -d
checking for gawk... gawk
checking whether make sets $(MAKE)... yes
checking whether make supports nested variables... yes
checking build system type... x86_64-apple-darwin11.4.0
checking host system type... x86_64-apple-darwin11.4.0
checking for platform... macos
checking for options file... no
configure: builddir: /private/tmp/homebrew-open-mpi-1.6-trJD/openmpi-1.6/ompi/contrib/vt/vt
configure: srcdir: /private/tmp/homebrew-open-mpi-1.6-trJD/openmpi-1.6/ompi/contrib/vt/vt
checking if build filesystem is case sensitive... no
checking for gcc... /usr/bin/clang
checking whether the C compiler works... yes
checking for C compiler default output file name... a.out
checking for suffix of executables...
checking whether we are cross compiling... no
checking for suffix of object files... o
checking whether we are using the GNU C compiler... yes
checking whether /usr/bin/clang accepts -g... yes
checking for /usr/bin/clang option to accept ISO C89... none needed
checking for style of include used by make... GNU
checking dependency style of /usr/bin/clang... none
checking whether /usr/bin/clang and cc understand -c and -o together... rm: conftest.dSYM: is a directory
yes
checking whether we are using the GNU C++ compiler... yes
checking whether /usr/bin/clang++ accepts -g... yes
checking dependency style of /usr/bin/clang++... none
checking how to run the C preprocessor... /usr/bin/clang -E
checking how to run the C++ preprocessor... /usr/bin/clang++ -E
checking dependency style of /usr/bin/clang... none
checking whether we are using the GNU Fortran 77 compiler... yes
checking whether /usr/local/bin/gfortran accepts -g... yes
checking whether we are using the GNU Fortran compiler... yes
checking whether /usr/local/bin/gfortran accepts -g... yes
checking for ar... ar
checking whether ln -s works... yes
checking for gawk... (cached) gawk
checking for java... java
checking for grep that handles long lines and -e... /usr/bin/grep
checking for egrep... /usr/bin/grep -E
checking for ANSI C header files... rm: conftest.dSYM: is a directory
rm: conftest.dSYM: is a directory
yes
checking for sys/types.h... yes
checking for sys/stat.h... yes
checking for stdlib.h... yes
checking for string.h... yes
checking for memory.h... yes
checking for strings.h... yes
checking for inttypes.h... yes
checking for stdint.h... yes
checking for unistd.h... yes
checking for stdint.h... (cached) yes
checking for inttypes.h... (cached) yes
checking fnmatch.h usability... yes
checking fnmatch.h presence... yes
checking for fnmatch.h... yes
checking sys/param.h usability... yes
checking sys/param.h presence... yes
checking for sys/param.h... yes
checking for size_t... yes
checking size of void*... 8
checking size of int... 4
checking size of long... 8
checking size of mode_t... 2
checking whether va_copy is declared... yes
checking whether __va_copy is declared... yes
checking for asprintf... yes
checking for snprintf... yes
checking for vasprintf... yes
checking for vsnprintf... yes
checking for strdup... yes
checking for memmove... yes
checking how to print strings... printf
checking for a sed that does not truncate output... /usr/local/bin/gsed
checking for fgrep... /usr/bin/grep -F
checking for ld used by /usr/bin/clang... /usr/bin/clang
checking if the linker (/usr/bin/clang) is GNU ld... no
checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm
checking the name lister (/usr/bin/nm) interface... BSD nm
checking the maximum length of command line arguments... 196608
checking whether the shell understands some XSI constructs... yes
checking whether the shell understands "+="... yes
checking how to convert x86_64-apple-darwin11.4.0 file names to x86_64-apple-darwin11.4.0 format... func_convert_file_noop
checking how to convert x86_64-apple-darwin11.4.0 file names to toolchain format... func_convert_file_noop
checking for /usr/bin/clang option to reload object files... -r
checking for objdump... no
checking how to recognize dependent libraries... pass_all
checking for dlltool... no
checking how to associate runtime and link libraries... printf %s\n
checking for archiver @FILE support... no
checking for strip... strip
checking for ranlib... ranlib
checking command to parse /usr/bin/nm output from /usr/bin/clang object... ok
checking for sysroot... no
checking for mt... no
checking if : is a manifest tool... no
checking for dsymutil... dsymutil
checking for nmedit... nmedit
checking for lipo... lipo
checking for otool... otool
checking for otool64... no
checking for -single_module linker flag... yes
checking for -exported_symbols_list linker flag... yes
checking for -force_load linker flag... yes
checking for dlfcn.h... yes
checking for objdir... .libs
checking if /usr/bin/clang supports -fno-rtti -fno-exceptions... yes
checking for /usr/bin/clang option to produce PIC... -fno-common -DPIC
checking if /usr/bin/clang PIC flag -fno-common -DPIC works... yes
checking if /usr/bin/clang static flag -static works... no
checking if /usr/bin/clang supports -c -o file.o... yes
checking if /usr/bin/clang supports -c -o file.o... (cached) yes
checking whether the /usr/bin/clang linker (/usr/bin/clang) supports shared libraries... yes
checking dynamic linker characteristics... darwin11.4.0 dyld
checking how to hardcode library paths into programs... immediate
checking whether stripping libraries is possible... yes
checking if libtool supports shared libraries... yes
checking whether to build shared libraries... yes
checking whether to build static libraries... yes
checking how to run the C++ preprocessor... /usr/bin/clang++ -E
checking for ld used by /usr/bin/clang++... /usr/bin/clang
checking if the linker (/usr/bin/clang) is GNU ld... no
checking whether the /usr/bin/clang++ linker (/usr/bin/clang) supports shared libraries... yes
checking for /usr/bin/clang++ option to produce PIC... -fno-common -DPIC
checking if /usr/bin/clang++ PIC flag -fno-common -DPIC works... yes
checking if /usr/bin/clang++ static flag -static works... no
checking if /usr/bin/clang++ supports -c -o file.o... yes
checking if /usr/bin/clang++ supports -c -o file.o... (cached) yes
checking whether the /usr/bin/clang++ linker (/usr/bin/clang) supports shared libraries... yes
checking dynamic linker characteristics... darwin11.4.0 dyld
checking how to hardcode library paths into programs... immediate
checking if libtool supports shared libraries... yes
checking whether to build shared libraries... yes
checking whether to build static libraries... yes
checking for /usr/local/bin/gfortran option to produce PIC... -fno-common
checking if /usr/local/bin/gfortran PIC flag -fno-common works... yes
checking if /usr/local/bin/gfortran static flag -static works... no
checking if /usr/local/bin/gfortran supports -c -o file.o... yes
checking if /usr/local/bin/gfortran supports -c -o file.o... (cached) yes
checking whether the /usr/local/bin/gfortran linker (/usr/bin/clang) supports shared libraries... yes
checking dynamic linker characteristics... darwin11.4.0 dyld
checking how to hardcode library paths into programs... immediate
checking if libtool supports shared libraries... yes
checking whether to build shared libraries... yes
checking whether to build static libraries... yes
checking for /usr/local/bin/gfortran option to produce PIC... -fno-common
checking if /usr/local/bin/gfortran PIC flag -fno-common works... yes
checking if /usr/local/bin/gfortran static flag -static works... no
checking if /usr/local/bin/gfortran supports -c -o file.o... yes
checking if /usr/local/bin/gfortran supports -c -o file.o... (cached) yes
checking whether the /usr/local/bin/gfortran linker (/usr/bin/clang) supports shared libraries... yes
checking dynamic linker characteristics... darwin11.4.0 dyld
checking how to hardcode library paths into programs... immediate
configure: selected timer: TIMER_CYCLE_COUNTER
configure: global timer: no
checking for compiler instrumentation... unknown
configure: error: the compiler 'clang' doesn't support instrumentation
checking BPatch.h usability... no
checking BPatch.h presence... no
checking for BPatch.h... no
configure: error: no BPatch.h found; check path for Dyninst package first...
checking for tau_instrumentor... no
configure: error: no tau_instrumentor found; check path for PDToolkit first...
configure: we are configuring inside Open MPI; presetting cache to skip MPI related tests
checking for mpicc... (cached) /usr/bin/clang
checking for mpicxx... (cached) /usr/bin/clang++
checking whether MPI_IN_PLACE is declared... (cached) yes
checking for MPI_Add_error_class... (cached) yes
checking for MPI_Add_error_code... (cached) yes
checking for MPI_Add_error_string... (cached) yes
checking for MPI_Finalized... (cached) yes
checking for MPI_Type_create_f90_complex... (cached) yes
checking for MPI_Type_create_f90_integer... (cached) yes
checking for MPI_Type_create_f90_real... (cached) yes
checking for MPI_Type_match_size... (cached) yes
checking for PMPI_Win_test... (cached) yes
checking for PMPI_Win_lock... (cached) yes
checking for PMPI_Win_unlock... (cached) yes
checking for MPI_Register_datarep... (cached) yes
checking for PMPI_File_read_ordered... (cached) yes
checking for PMPI_File_read_ordered_begin... (cached) yes
checking for PMPI_File_write_ordered... (cached) yes
checking for PMPI_File_write_ordered_begin... (cached) yes
configure: error: MPI Correctness Checking support cannot be built inside Open MPI
checking math.h usability... yes
checking math.h presence... yes
checking for math.h... yes
checking whether we need to link -lm to get math functions... no
checking f2c.h usability... no
checking f2c.h presence... no
checking for f2c.h... no
configure: error: no f2c.h found; check path for CLAPACK package first...
checking for C++ runtime library... -lstdc++
checking for the pthreads library -lpthreads... no
checking whether pthreads work without any flags... yes
checking for joinable pthread attribute... PTHREAD_CREATE_JOINABLE
checking if more special flags are required for pthreads... -D_THREAD_SAFE
checking for cc_r... /usr/bin/clang
checking pthread.h usability... yes
checking pthread.h presence... yes
checking for pthread.h... yes
checking for pthread_condattr_getpshared... yes
checking for pthread_condattr_setpshared... yes
checking for pthread_mutexattr_getpshared... yes
checking for pthread_mutexattr_setpshared... yes
checking for OpenMP flag of C compiler... unknown
checking whether we can build shared libraries... yes
checking jvmti.h usability... no
checking jvmti.h presence... no
checking for jvmti.h... no
configure: error: no jvmti.h found; check path for JVMTI package first...
checking papi.h usability... no
checking papi.h presence... no
checking for papi.h... no
configure: error: no papi.h found; check path for PAPI package first...
checking libcpc.h usability... no
checking libcpc.h presence... no
checking for libcpc.h... no
configure: error: no libcpc.h found; check path for CPC package first...
checking whether we are on a NEC SX... no
checking sys/resource.h usability... yes
checking sys/resource.h presence... yes
checking for sys/resource.h... yes
checking for getrusage... yes
checking whether RUSAGE_THREAD is declared... no
checking for dlfcn.h... (cached) yes
checking whether linking with -ldl works... yes
checking whether RTLD_DEFAULT is declared... yes
checking whether RTLD_NEXT is declared... yes
checking malloc.h usability... no
checking malloc.h presence... no
checking for malloc.h... no
configure: error: no malloc.h found
checking sched.h usability... yes
checking sched.h presence... yes
checking for sched.h... yes
checking for sched_getcpu... no
checking cuda.h usability... no
checking cuda.h presence... no
checking for cuda.h... no
configure: error: no cuda.h found; check path for CUDA Toolkit first...
checking cuda_runtime_api.h usability... no
checking cuda_runtime_api.h presence... no
checking for cuda_runtime_api.h... no
configure: error: no cuda_runtime_api.h found; check path for CUDA Toolkit first...
checking cupti.h usability... no
checking cupti.h presence... no
checking for cupti.h... no
configure: error: no cupti.h found; check path for CUPTI package first...
checking for dlfcn.h... (cached) yes
checking whether linking with -ldl works... yes
checking whether RTLD_DEFAULT is declared... (cached) yes
checking whether RTLD_NEXT is declared... (cached) yes
checking for shared LIBC's pathname... unknown
checking ctool/ctool.h usability... no
checking ctool/ctool.h presence... no
checking for ctool/ctool.h... no
configure: error: no ctool/ctool.h found; check path for CTool package first...
configure: error: pathname of shared LIBC required for LIBC tracing; please specify it by --with-shlibc
configure: error: pathname of shared LIBC required for LIBC-I/O tracing; please specify it by --with-shlibc
checking zlib.h usability... yes
checking zlib.h presence... yes
checking for zlib.h... yes
checking whether linking with -lz works... yes
configure: configuring in extlib/otf (/private/tmp/homebrew-open-mpi-1.6-trJD/openmpi-1.6/ompi/contrib/vt/vt/extlib/otf)
configure: running /bin/sh ./configure --enable-static=yes --enable-shared=yes --with-mpi --with-mpi-lib="-lmpi" --with-zlib-lib="-lz" --prefix="/usr/local/Cellar/open-mpi/1.6" --exec-prefix="${prefix}" --bindir="${exec_prefix}/bin" --libdir="${exec_prefix}/lib" --includedir="${prefix}/include/vampirtrace" --docdir="${datarootdir}/doc/otf" --cache-file="/dev/null" --srcdir="."
checking build system type... x86_64-apple-darwin11.4.0
checking host system type... x86_64-apple-darwin11.4.0
checking target system type... x86_64-apple-darwin11.4.0
checking for a BSD-compatible install... /usr/bin/install -c
checking whether build environment is sane... yes
checking for a thread-safe mkdir -p... config/install-sh -c -d
checking for gawk... gawk
checking whether make sets $(MAKE)... yes
checking whether make supports nested variables... yes
checking whether the C++ compiler works... yes
checking for C++ compiler default output file name... a.out
checking for suffix of executables...
checking whether we are cross compiling... no
checking for suffix of object files... o
checking whether we are using the GNU C++ compiler... yes
checking whether /usr/bin/clang++ accepts -g... yes
checking for style of include used by make... GNU
checking dependency style of /usr/bin/clang++... gcc3
checking for gcc... /usr/bin/clang
checking whether we are using the GNU C compiler... yes
checking whether /usr/bin/clang accepts -g... yes
checking for /usr/bin/clang option to accept ISO C89... none needed
checking dependency style of /usr/bin/clang... gcc3
checking how to print strings... printf
checking for a sed that does not truncate output... /usr/local/bin/gsed
checking for grep that handles long lines and -e... /usr/bin/grep
checking for egrep... /usr/bin/grep -E
checking for fgrep... /usr/bin/grep -F
checking for ld used by /usr/bin/clang... /usr/bin/clang
checking if the linker (/usr/bin/clang) is GNU ld... no
checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm
checking the name lister (/usr/bin/nm) interface... BSD nm
checking whether ln -s works... yes
checking the maximum length of command line arguments... 196608
checking whether the shell understands some XSI constructs... yes
checking whether the shell understands "+="... yes
checking how to convert x86_64-apple-darwin11.4.0 file names to x86_64-apple-darwin11.4.0 format... func_convert_file_noop
checking how to convert x86_64-apple-darwin11.4.0 file names to toolchain format... func_convert_file_noop
checking for /usr/bin/clang option to reload object files... -r
checking for objdump... no
checking how to recognize dependent libraries... pass_all
checking for dlltool... no
checking how to associate runtime and link libraries... printf %s\n
checking for ar... ar
checking for archiver @FILE support... no
checking for strip... strip
checking for ranlib... ranlib
checking command to parse /usr/bin/nm output from /usr/bin/clang object... ok
checking for sysroot... no
checking for mt... no
checking if : is a manifest tool... no
checking for dsymutil... dsymutil
checking for nmedit... nmedit
checking for lipo... lipo
checking for otool... otool
checking for otool64... no
checking for -single_module linker flag... yes
checking for -exported_symbols_list linker flag... yes
checking for -force_load linker flag... yes
checking how to run the C preprocessor... /usr/bin/clang -E
checking for ANSI C header files... yes
checking for sys/types.h... yes
checking for sys/stat.h... yes
checking for stdlib.h... yes
checking for string.h... yes
checking for memory.h... yes
checking for strings.h... yes
checking for inttypes.h... yes
checking for stdint.h... yes
checking for unistd.h... yes
checking for dlfcn.h... yes
checking for objdir... .libs
checking if /usr/bin/clang supports -fno-rtti -fno-exceptions... yes
checking for /usr/bin/clang option to produce PIC... -fno-common -DPIC
checking if /usr/bin/clang PIC flag -fno-common -DPIC works... yes
checking if /usr/bin/clang static flag -static works... no
checking if /usr/bin/clang supports -c -o file.o... yes
checking if /usr/bin/clang supports -c -o file.o... (cached) yes
checking whether the /usr/bin/clang linker (/usr/bin/clang) supports shared libraries... yes
checking dynamic linker characteristics... darwin11.4.0 dyld
checking how to hardcode library paths into programs... immediate
checking whether stripping libraries is possible... yes
checking if libtool supports shared libraries... yes
checking whether to build shared libraries... yes
checking whether to build static libraries... yes
checking how to run the C++ preprocessor... /usr/bin/clang++ -E
checking for ld used by /usr/bin/clang++... /usr/bin/clang
checking if the linker (/usr/bin/clang) is GNU ld... no
checking whether the /usr/bin/clang++ linker (/usr/bin/clang) supports shared libraries... yes
checking for /usr/bin/clang++ option to produce PIC... -fno-common -DPIC
checking if /usr/bin/clang++ PIC flag -fno-common -DPIC works... yes
checking if /usr/bin/clang++ static flag -static works... no
checking if /usr/bin/clang++ supports -c -o file.o... yes
checking if /usr/bin/clang++ supports -c -o file.o... (cached) yes
checking whether the /usr/bin/clang++ linker (/usr/bin/clang) supports shared libraries... yes
checking dynamic linker characteristics... darwin11.4.0 dyld
checking how to hardcode library paths into programs... immediate
checking whether byte ordering is bigendian... no
checking for mpicc... /usr/bin/clang
checking for mpic++... /usr/bin/clang++
checking for OpenMP flag of C++ compiler... unknown
checking vtf3.h usability... no
checking vtf3.h presence... no
checking for vtf3.h... no
configure: error: no vtf3.h found; check path for VTF3 package first...
checking zlib.h usability... yes
checking zlib.h presence... yes
checking for zlib.h... yes
checking whether linking with -lm works... yes
checking whether we need to link -lm to get math functions... no
checking for pdflatex... no
checking for pdftex... no
checking for ANSI C header files... (cached) yes
checking fcntl.h usability... yes
checking fcntl.h presence... yes
checking for fcntl.h... yes
checking stddef.h usability... yes
checking stddef.h presence... yes
checking for stddef.h... yes
checking for stdlib.h... (cached) yes
checking for string.h... (cached) yes
checking sys/param.h usability... yes
checking sys/param.h presence... yes
checking for sys/param.h... yes
checking sys/select.h usability... yes
checking sys/select.h presence... yes
checking for sys/select.h... yes
checking sys/time.h usability... yes
checking sys/time.h presence... yes
checking for sys/time.h... yes
checking for unistd.h... (cached) yes
checking for stdint.h... (cached) yes
checking for inttypes.h... (cached) yes
checking whether va_copy is declared... yes
checking whether __va_copy is declared... yes
checking for asprintf... yes
checking for snprintf... yes
checking for vasprintf... yes
checking for vsnprintf... yes
checking for strdup... yes
checking for gettimeofday... yes
checking for _LARGEFILE_SOURCE value needed for large files... no
checking whether O_NOATIME is declared... no
checking for size_t... yes
checking size of long... 8
checking for library containing clock_gettime... no
configure: creating ./config.status
config.status: creating Makefile
config.status: creating vendor/jenkins_hash/Makefile
config.status: creating otflib/Makefile
config.status: creating otflib/OTF_inttypes_unix.h
config.status: creating otfauxlib/Makefile
config.status: creating otflib_py/Makefile
config.status: creating tools/Makefile
config.status: creating tools/otfaux/Makefile
config.status: creating tools/otfcompress/Makefile
config.status: creating tools/otfconfig/Makefile
config.status: creating tools/otfdump/Makefile
config.status: creating tools/otfinfo/Makefile
config.status: creating tools/otfmerge/Makefile
config.status: creating tools/otfmerge/mpi/Makefile
config.status: creating tools/otfprofile/Makefile
config.status: creating tools/otfprofile/mpi/Makefile
config.status: creating tools/otfshrink/Makefile
config.status: creating tools/otf2vtf/Makefile
config.status: creating tools/vtf2otf/Makefile
config.status: creating tests/Makefile
config.status: creating tests/hello/Makefile
config.status: creating tests/generic_streams/Makefile
config.status: creating tests/generic_streams-mpi/Makefile
config.status: creating tests/progress/Makefile
config.status: creating tests/read_from_buffer/Makefile
config.status: creating tests/thumbnail/Makefile
config.status: creating docu/Makefile
config.status: creating config.h
config.status: executing depfiles commands
config.status: executing libtool commands
checking for java... (cached) java
configure: setup capabilities of vtsetup
checking whether we can build shared libraries... yes
configure: setup capabilities of vtrun
configure: creating ./config.status
config.status: creating Makefile
config.status: creating extlib/Makefile
config.status: creating util/Makefile
config.status: creating util/installdirs_conf.h
config.status: creating rfg/Makefile
config.status: creating vtlib/Makefile
config.status: creating tools/Makefile
config.status: creating tools/opari/Makefile
config.status: creating tools/opari/tool/Makefile
config.status: creating tools/opari/doc/Makefile
config.status: creating tools/vtcpcavail/Makefile
config.status: creating tools/vtdyn/Makefile
config.status: creating tools/vtdyn/dynattlib/Makefile
config.status: creating tools/vtfilter/Makefile
config.status: creating tools/vtfilter/mpi/Makefile
config.status: creating tools/vtjava/Makefile
config.status: creating tools/vtjava/vtjava
config.status: creating tools/vtlibwrapgen/Makefile
config.status: creating tools/vtlibwrapgen/vt_libwrapgen_defs.h
config.status: creating tools/vtrun/Makefile
config.status: creating tools/vtrun/vtrun
config.status: creating tools/vtsetup/Makefile
config.status: creating tools/vtsetup/vtsetup
config.status: creating tools/vtsetup/vtsetup-config.xml
config.status: creating tools/vtsetup/vtsetup-data.xml
config.status: creating tools/vtsetup/doc/Makefile
config.status: creating tools/vtunify/Makefile
config.status: creating tools/vtunify/mpi/Makefile
config.status: creating tools/vtwrapper/Makefile
config.status: creating tools/vtwrapper/vtcc-wrapper-data.txt
config.status: creating tools/vtwrapper/vtc++-wrapper-data.txt
config.status: creating tools/vtwrapper/vtf77-wrapper-data.txt
config.status: creating tools/vtwrapper/vtf90-wrapper-data.txt
config.status: creating tools/vtwrapper/vtnvcc-wrapper-data.txt
config.status: creating include/Makefile
config.status: creating include/vt_inttypes.h
config.status: creating doc/Makefile
config.status: creating etc/Makefile
config.status: creating config/mpigen/mk_registry.sh
config.status: creating config/mpigen/mk_c_wrapper.sh
config.status: creating config.h
config.status: executing depfiles commands
config.status: executing libtool commands
configure: executing MPI wrapper generator
configure: /bin/sh './configure' succeeded for ompi/contrib/vt/vt
checking if contributed component vt can compile... yes
 
============================================================================
== Symbol visibility feature
============================================================================
checking if /usr/bin/clang supports -fvisibility=hidden... yes
checking whether to enable symbol visibility... yes (via -fvisibility=hidden)
 
============================================================================
== Final top-level OMPI configuration
============================================================================
 
*** Libevent 3rd party event handler
checking for ANSI C header files... (cached) yes
checking for fcntl.h... (cached) yes
checking for stdarg.h... (cached) yes
checking for inttypes.h... (cached) yes
checking for stdint.h... (cached) yes
checking for poll.h... (cached) yes
checking signal.h usability... yes
checking signal.h presence... yes
checking for signal.h... yes
checking for unistd.h... (cached) yes
checking sys/epoll.h usability... no
checking sys/epoll.h presence... no
checking for sys/epoll.h... no
checking for sys/time.h... (cached) yes
checking for sys/queue.h... (cached) yes
checking sys/event.h usability... yes
checking sys/event.h presence... yes
checking for sys/event.h... yes
checking for sys/ioctl.h... (cached) yes
checking sys/devpoll.h usability... no
checking sys/devpoll.h presence... no
checking for sys/devpoll.h... no
checking for TAILQ_FOREACH in sys/queue.h... yes
checking for timeradd in sys/time.h... yes
checking whether time.h and sys/time.h may both be included... yes
checking for gettimeofday... yes
checking for vasprintf... (cached) yes
checking for fcntl... yes
checking for strtoll... yes
checking for F_SETFD in fcntl.h... yes
checking for select... yes
checking for poll... yes
checking for epoll_ctl... no
checking for working kqueue... no (MAC OS X)
checking for port_create... no
checking for pid_t... yes
checking for size_t... yes
 
*** Libtool configuration
checking how to print strings... printf
checking for a sed that does not truncate output... /usr/local/bin/gsed
checking for ld used by /usr/bin/clang... /usr/bin/clang
checking if the linker (/usr/bin/clang) is GNU ld... no
checking the maximum length of command line arguments... 196608
checking whether the shell understands some XSI constructs... yes
checking whether the shell understands "+="... yes
checking how to convert x86_64-apple-darwin11.4.0 file names to x86_64-apple-darwin11.4.0 format... func_convert_file_noop
checking how to convert x86_64-apple-darwin11.4.0 file names to toolchain format... func_convert_file_noop
checking for /usr/bin/clang option to reload object files... -r
checking for objdump... no
checking how to recognize dependent libraries... pass_all
checking for dlltool... no
checking how to associate runtime and link libraries... printf %s\n
checking for ar... ar
checking for archiver @FILE support... no
checking for strip... strip
checking for ranlib... ranlib
checking command to parse /usr/bin/nm output from /usr/bin/clang object... ok
checking for sysroot... no
checking for mt... no
checking if : is a manifest tool... no
checking for dsymutil... dsymutil
checking for nmedit... nmedit
checking for lipo... lipo
checking for otool... otool
checking for otool64... no
checking for -single_module linker flag... yes
checking for -exported_symbols_list linker flag... yes
checking for -force_load linker flag... yes
checking for dlfcn.h... (cached) yes
checking for objdir... .libs
checking if /usr/bin/clang supports -fno-rtti -fno-exceptions... yes
checking for /usr/bin/clang option to produce PIC... -fno-common -DPIC
checking if /usr/bin/clang PIC flag -fno-common -DPIC works... yes
checking if /usr/bin/clang static flag -static works... no
checking if /usr/bin/clang supports -c -o file.o... yes
checking if /usr/bin/clang supports -c -o file.o... (cached) yes
checking whether the /usr/bin/clang linker (/usr/bin/clang) supports shared libraries... yes
checking dynamic linker characteristics... darwin11.4.0 dyld
checking how to hardcode library paths into programs... immediate
checking for dlopen in -ldl... yes
checking whether a program can dlopen itself... yes
checking whether a statically linked program can dlopen itself... yes
checking whether stripping libraries is possible... yes
checking if libtool supports shared libraries... yes
checking whether to build shared libraries... yes
checking whether to build static libraries... no
checking how to run the C++ preprocessor... /usr/bin/clang++ -E
checking for ld used by /usr/bin/clang++... /usr/bin/clang
checking if the linker (/usr/bin/clang) is GNU ld... no
checking whether the /usr/bin/clang++ linker (/usr/bin/clang) supports shared libraries... yes
checking for /usr/bin/clang++ option to produce PIC... -fno-common -DPIC
checking if /usr/bin/clang++ PIC flag -fno-common -DPIC works... yes
checking if /usr/bin/clang++ static flag -static works... no
checking if /usr/bin/clang++ supports -c -o file.o... yes
checking if /usr/bin/clang++ supports -c -o file.o... (cached) yes
checking whether the /usr/bin/clang++ linker (/usr/bin/clang) supports shared libraries... yes
checking dynamic linker characteristics... darwin11.4.0 dyld
checking how to hardcode library paths into programs... immediate
checking if libtool supports shared libraries... yes
checking whether to build shared libraries... yes
checking whether to build static libraries... no
checking for /usr/local/bin/gfortran option to produce PIC... -fno-common
checking if /usr/local/bin/gfortran PIC flag -fno-common works... yes
checking if /usr/local/bin/gfortran static flag -static works... no
checking if /usr/local/bin/gfortran supports -c -o file.o... yes
checking if /usr/local/bin/gfortran supports -c -o file.o... (cached) yes
checking whether the /usr/local/bin/gfortran linker (/usr/bin/clang) supports shared libraries... yes
checking dynamic linker characteristics... darwin11.4.0 dyld
checking how to hardcode library paths into programs... immediate
checking if libtool supports shared libraries... yes
checking whether to build shared libraries... yes
checking whether to build static libraries... no
checking for /usr/local/bin/gfortran option to produce PIC... -fno-common
checking if /usr/local/bin/gfortran PIC flag -fno-common works... yes
checking if /usr/local/bin/gfortran static flag -static works... no
checking if /usr/local/bin/gfortran supports -c -o file.o... yes
checking if /usr/local/bin/gfortran supports -c -o file.o... (cached) yes
checking whether the /usr/local/bin/gfortran linker (/usr/bin/clang) supports shared libraries... yes
checking dynamic linker characteristics... darwin11.4.0 dyld
checking how to hardcode library paths into programs... immediate
 
*** GNU libltdl setup
checking location of libltdl... internal copy
configure: OMPI configuring in opal/libltdl
configure: running /bin/sh './configure' '--prefix=/usr/local/Cellar/open-mpi/1.6' '--disable-dependency-tracking' 'CC=/usr/bin/clang' 'CXX=/usr/bin/clang++' 'F77=/usr/local/bin/gfortran' 'FFLAGS=-march=core2 -msse4' 'FC=/usr/local/bin/gfortran' 'FCFLAGS=-march=core2 -msse4' --enable-ltdl-convenience --disable-ltdl-install --enable-shared --disable-static --cache-file=/dev/null --srcdir=. --disable-option-checking
checking for a BSD-compatible install... /usr/bin/install -c
checking whether build environment is sane... yes
checking for a thread-safe mkdir -p... config/install-sh -c -d
checking for gawk... gawk
checking whether make sets $(MAKE)... yes
checking build system type... x86_64-apple-darwin11.4.0
checking host system type... x86_64-apple-darwin11.4.0
checking how to print strings... printf
checking for style of include used by make... GNU
checking for gcc... /usr/bin/clang
checking whether the C compiler works... yes
checking for C compiler default output file name... a.out
checking for suffix of executables...
checking whether we are cross compiling... no
checking for suffix of object files... o
checking whether we are using the GNU C compiler... yes
checking whether /usr/bin/clang accepts -g... yes
checking for /usr/bin/clang option to accept ISO C89... none needed
checking dependency style of /usr/bin/clang... none
checking for a sed that does not truncate output... /usr/local/bin/gsed
checking for grep that handles long lines and -e... /usr/bin/grep
checking for egrep... /usr/bin/grep -E
checking for fgrep... /usr/bin/grep -F
checking for ld used by /usr/bin/clang... /usr/bin/clang
checking if the linker (/usr/bin/clang) is GNU ld... no
checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm
checking the name lister (/usr/bin/nm) interface... rm: conftest.dSYM: is a directory
BSD nm
checking whether ln -s works... yes
checking the maximum length of command line arguments... 196608
checking whether the shell understands some XSI constructs... yes
checking whether the shell understands "+="... yes
checking how to convert x86_64-apple-darwin11.4.0 file names to x86_64-apple-darwin11.4.0 format... func_convert_file_noop
checking how to convert x86_64-apple-darwin11.4.0 file names to toolchain format... func_convert_file_noop
checking for /usr/bin/clang option to reload object files... -r
checking for objdump... no
checking how to recognize dependent libraries... pass_all
checking for dlltool... no
checking how to associate runtime and link libraries... printf %s\n
checking for ar... ar
checking for archiver @FILE support... rm: conftest.dSYM: is a directory
no
checking for strip... strip
checking for ranlib... ranlib
checking command to parse /usr/bin/nm output from /usr/bin/clang object... rm: conftest.dSYM: is a directory
ok
checking for sysroot... no
checking for mt... no
checking if : is a manifest tool... no
checking for dsymutil... dsymutil
checking for nmedit... nmedit
checking for lipo... lipo
checking for otool... otool
checking for otool64... no
checking for -single_module linker flag... yes
checking for -exported_symbols_list linker flag... yes
checking for -force_load linker flag... yes
checking how to run the C preprocessor... /usr/bin/clang -E
checking for ANSI C header files... yes
checking for sys/types.h... yes
checking for sys/stat.h... yes
checking for stdlib.h... yes
checking for string.h... yes
checking for memory.h... yes
checking for strings.h... yes
checking for inttypes.h... yes
checking for stdint.h... yes
checking for unistd.h... yes
checking for dlfcn.h... yes
checking for objdir... .libs
checking if /usr/bin/clang supports -fno-rtti -fno-exceptions... yes
checking for /usr/bin/clang option to produce PIC... -fno-common -DPIC
checking if /usr/bin/clang PIC flag -fno-common -DPIC works... yes
checking if /usr/bin/clang static flag -static works... no
checking if /usr/bin/clang supports -c -o file.o... yes
checking if /usr/bin/clang supports -c -o file.o... (cached) yes
checking whether the /usr/bin/clang linker (/usr/bin/clang) supports shared libraries... yes
checking dynamic linker characteristics... darwin11.4.0 dyld
checking how to hardcode library paths into programs... immediate
checking for dlopen in -ldl... yes
checking whether a program can dlopen itself... yes
checking whether a statically linked program can dlopen itself... yes
checking whether stripping libraries is possible... yes
checking if libtool supports shared libraries... yes
checking whether to build shared libraries... yes
checking whether to build static libraries... no
checking which extension is used for runtime loadable modules... .so
checking which variable specifies run-time module search path... DYLD_LIBRARY_PATH
checking for the default library search path... /usr/local/lib /lib /usr/lib
checking for library containing dlopen... none required
checking for dlerror... yes
checking for shl_load... no
checking for shl_load in -ldld... no
checking for dld_link in -ldld... no
checking for _ prefix in compiled symbols... yes
checking whether we have to add an underscore for dlsym... no
checking whether deplibs are loaded by dlopen... yes
checking for argz.h... no
checking for error_t... no
checking for argz_add... no
checking for argz_append... no
checking for argz_count... no
checking for argz_create_sep... no
checking for argz_insert... no
checking for argz_next... no
checking for argz_stringify... no
checking whether libtool supports -dlopen/-dlpreopen... yes
checking for unistd.h... (cached) yes
checking for dl.h... no
checking for sys/dl.h... no
checking for dld.h... no
checking for mach-o/dyld.h... yes
checking for dirent.h... yes
checking for closedir... yes
checking for opendir... yes
checking for readdir... yes
checking for strlcat... yes
checking for strlcpy... yes
configure: creating ./config.status
config.status: creating Makefile
config.status: creating config.h
config.status: executing depfiles commands
config.status: executing libtool commands
configure: /bin/sh './configure' succeeded for opal/libltdl
checking for libtool-supplied linker flags... no extra flags
 
*** Compiler flags
checking which of CFLAGS are ok for debugger modules... -DNDEBUG -fno-strict-aliasing
checking for debugger extra CFLAGS... -g
 
*** Wrapper compiler final setup
checking for perl... /usr/bin/perl
checking for OPAL CPPFLAGS...
checking for OPAL CFLAGS...
checking for OPAL CXXFLAGS...
checking for OPAL LDFLAGS...
checking for OPAL LIBS... -lm
checking for OPAL extra include dirs...
checking for ORTE CPPFLAGS...
checking for ORTE CXXFLAGS...
checking for ORTE CFLAGS...
checking for ORTE LDFLAGS...
checking for ORTE LIBS... -lm
checking for ORTE extra include dirs...
checking for OMPI CPPFLAGS...
checking for OMPI CFLAGS...
checking for OMPI CXXFLAGS...
checking for OMPI FFLAGS... -Wl,-commons,use_dylibs
checking for OMPI FCFLAGS... -Wl,-commons,use_dylibs
checking for OMPI LDFLAGS...
checking for OMPI LIBS... -lm
checking for OMPI extra include dirs...
 
*** Final output
configure: creating ./config.status
config.status: creating ompi/include/ompi/version.h
config.status: creating orte/include/orte/version.h
config.status: creating opal/include/opal/version.h
config.status: creating opal/mca/hwloc/hwloc132/hwloc/Makefile
config.status: creating opal/mca/hwloc/hwloc132/hwloc/include/Makefile
config.status: creating opal/mca/hwloc/hwloc132/hwloc/src/Makefile
config.status: creating opal/mca/installdirs/config/install_dirs.h
config.status: creating opal/mca/backtrace/Makefile
config.status: creating opal/mca/backtrace/darwin/Makefile
config.status: creating opal/mca/backtrace/execinfo/Makefile
config.status: creating opal/mca/backtrace/none/Makefile
config.status: creating opal/mca/backtrace/printstack/Makefile
config.status: creating opal/mca/carto/Makefile
config.status: creating opal/mca/carto/auto_detect/Makefile
config.status: creating opal/mca/carto/file/Makefile
config.status: creating opal/mca/crs/Makefile
config.status: creating opal/mca/crs/blcr/Makefile
config.status: creating opal/mca/crs/none/Makefile
config.status: creating opal/mca/crs/self/Makefile
config.status: creating opal/mca/hwloc/Makefile
config.status: creating opal/mca/hwloc/external/Makefile
config.status: creating opal/mca/hwloc/hwloc132/Makefile
config.status: creating opal/mca/installdirs/Makefile
config.status: creating opal/mca/installdirs/config/Makefile
config.status: creating opal/mca/installdirs/env/Makefile
config.status: creating opal/mca/installdirs/windows/Makefile
config.status: creating opal/mca/maffinity/Makefile
config.status: creating opal/mca/maffinity/first_use/Makefile
config.status: creating opal/mca/maffinity/hwloc/Makefile
config.status: creating opal/mca/memchecker/Makefile
config.status: creating opal/mca/memchecker/valgrind/Makefile
config.status: creating opal/mca/memcpy/Makefile
config.status: creating opal/mca/memory/Makefile
config.status: creating opal/mca/memory/linux/Makefile
config.status: creating opal/mca/memory/malloc_solaris/Makefile
config.status: creating opal/mca/paffinity/Makefile
config.status: creating opal/mca/paffinity/hwloc/Makefile
config.status: creating opal/mca/paffinity/test/Makefile
config.status: creating opal/mca/pstat/Makefile
config.status: creating opal/mca/pstat/darwin/Makefile
config.status: creating opal/mca/pstat/linux/Makefile
config.status: creating opal/mca/shmem/Makefile
config.status: creating opal/mca/shmem/mmap/Makefile
config.status: creating opal/mca/shmem/posix/Makefile
config.status: creating opal/mca/shmem/sysv/Makefile
config.status: creating opal/mca/shmem/windows/Makefile
config.status: creating opal/mca/sysinfo/Makefile
config.status: creating opal/mca/sysinfo/darwin/Makefile
config.status: creating opal/mca/sysinfo/linux/Makefile
config.status: creating opal/mca/sysinfo/solaris/Makefile
config.status: creating opal/mca/timer/Makefile
config.status: creating opal/mca/timer/aix/Makefile
config.status: creating opal/mca/timer/altix/Makefile
config.status: creating opal/mca/timer/catamount/Makefile
config.status: creating opal/mca/timer/darwin/Makefile
config.status: creating opal/mca/timer/linux/Makefile
config.status: creating opal/mca/timer/solaris/Makefile
config.status: creating opal/mca/timer/windows/Makefile
config.status: creating orte/mca/errmgr/Makefile
config.status: creating orte/mca/errmgr/default/Makefile
config.status: creating orte/mca/ess/Makefile
config.status: creating orte/mca/ess/alps/Makefile
config.status: creating orte/mca/ess/cnos/Makefile
config.status: creating orte/mca/ess/env/Makefile
config.status: creating orte/mca/ess/hnp/Makefile
config.status: creating orte/mca/ess/lsf/Makefile
config.status: creating orte/mca/ess/pmi/Makefile
config.status: creating orte/mca/ess/portals_utcp/Makefile
config.status: creating orte/mca/ess/singleton/Makefile
config.status: creating orte/mca/ess/slave/Makefile
config.status: creating orte/mca/ess/slurm/Makefile
config.status: creating orte/mca/ess/slurmd/Makefile
config.status: creating orte/mca/ess/tm/Makefile
config.status: creating orte/mca/ess/tool/Makefile
config.status: creating orte/mca/filem/Makefile
config.status: creating orte/mca/filem/rsh/Makefile
config.status: creating orte/mca/grpcomm/Makefile
config.status: creating orte/mca/grpcomm/bad/Makefile
config.status: creating orte/mca/grpcomm/basic/Makefile
config.status: creating orte/mca/grpcomm/cnos/Makefile
config.status: creating orte/mca/grpcomm/hier/Makefile
config.status: creating orte/mca/grpcomm/pmi/Makefile
config.status: creating orte/mca/iof/Makefile
config.status: creating orte/mca/iof/hnp/Makefile
config.status: creating orte/mca/iof/orted/Makefile
config.status: creating orte/mca/iof/tool/Makefile
config.status: creating orte/mca/notifier/Makefile
config.status: creating orte/mca/notifier/command/Makefile
config.status: creating orte/mca/notifier/ftb/Makefile
config.status: creating orte/mca/notifier/smtp/Makefile
config.status: creating orte/mca/notifier/syslog/Makefile
config.status: creating orte/mca/odls/Makefile
config.status: creating orte/mca/odls/default/Makefile
config.status: creating orte/mca/odls/process/Makefile
config.status: creating orte/mca/oob/Makefile
config.status: creating orte/mca/oob/tcp/Makefile
config.status: creating orte/mca/plm/Makefile
config.status: creating orte/mca/plm/alps/Makefile
config.status: creating orte/mca/plm/ccp/Makefile
config.status: creating orte/mca/plm/lsf/Makefile
config.status: creating orte/mca/plm/process/Makefile
config.status: creating orte/mca/plm/rsh/Makefile
config.status: creating orte/mca/plm/slurm/Makefile
config.status: creating orte/mca/plm/tm/Makefile
config.status: creating orte/mca/ras/Makefile
config.status: creating orte/mca/ras/alps/Makefile
config.status: creating orte/mca/ras/ccp/Makefile
config.status: creating orte/mca/ras/cm/Makefile
config.status: creating orte/mca/ras/gridengine/Makefile
config.status: creating orte/mca/ras/loadleveler/Makefile
config.status: creating orte/mca/ras/lsf/Makefile
config.status: creating orte/mca/ras/slurm/Makefile
config.status: creating orte/mca/ras/tm/Makefile
config.status: creating orte/mca/rmaps/Makefile
config.status: creating orte/mca/rmaps/load_balance/Makefile
config.status: creating orte/mca/rmaps/rank_file/Makefile
config.status: creating orte/mca/rmaps/resilient/Makefile
config.status: creating orte/mca/rmaps/round_robin/Makefile
config.status: creating orte/mca/rmaps/seq/Makefile
config.status: creating orte/mca/rmaps/topo/Makefile
config.status: creating orte/mca/rmcast/Makefile
config.status: creating orte/mca/rmcast/tcp/Makefile
config.status: creating orte/mca/rmcast/udp/Makefile
config.status: creating orte/mca/rml/Makefile
config.status: creating orte/mca/rml/ftrm/Makefile
config.status: creating orte/mca/rml/oob/Makefile
config.status: creating orte/mca/routed/Makefile
config.status: creating orte/mca/routed/binomial/Makefile
config.status: creating orte/mca/routed/cm/Makefile
config.status: creating orte/mca/routed/direct/Makefile
config.status: creating orte/mca/routed/linear/Makefile
config.status: creating orte/mca/routed/radix/Makefile
config.status: creating orte/mca/routed/slave/Makefile
config.status: creating orte/mca/snapc/Makefile
config.status: creating orte/mca/snapc/full/Makefile
config.status: creating ompi/mca/allocator/Makefile
config.status: creating ompi/mca/allocator/basic/Makefile
config.status: creating ompi/mca/allocator/bucket/Makefile
config.status: creating ompi/mca/bml/Makefile
config.status: creating ompi/mca/bml/r2/Makefile
config.status: creating ompi/mca/btl/Makefile
config.status: creating ompi/mca/btl/elan/Makefile
config.status: creating ompi/mca/btl/mx/Makefile
config.status: creating ompi/mca/btl/ofud/Makefile
config.status: creating ompi/mca/btl/openib/Makefile
config.status: creating ompi/mca/btl/portals/Makefile
config.status: creating ompi/mca/btl/sctp/Makefile
config.status: creating ompi/mca/btl/self/Makefile
config.status: creating ompi/mca/btl/sm/Makefile
config.status: creating ompi/mca/btl/tcp/Makefile
config.status: creating ompi/mca/btl/udapl/Makefile
config.status: creating ompi/mca/coll/Makefile
config.status: creating ompi/mca/coll/basic/Makefile
config.status: creating ompi/mca/coll/fca/Makefile
config.status: creating ompi/mca/coll/hierarch/Makefile
config.status: creating ompi/mca/coll/inter/Makefile
config.status: creating ompi/mca/coll/self/Makefile
config.status: creating ompi/mca/coll/sm/Makefile
config.status: creating ompi/mca/coll/sync/Makefile
config.status: creating ompi/mca/coll/tuned/Makefile
config.status: creating ompi/mca/common/Makefile
config.status: creating ompi/mca/common/mx/Makefile
config.status: creating ompi/mca/common/portals/Makefile
config.status: creating ompi/mca/common/sm/Makefile
config.status: creating ompi/mca/crcp/Makefile
config.status: creating ompi/mca/crcp/bkmrk/Makefile
config.status: creating ompi/mca/dpm/Makefile
config.status: creating ompi/mca/dpm/orte/Makefile
config.status: creating ompi/mca/io/Makefile
config.status: creating ompi/mca/io/romio/Makefile
config.status: creating ompi/mca/mpool/Makefile
config.status: creating ompi/mca/mpool/fake/Makefile
config.status: creating ompi/mca/mpool/rdma/Makefile
config.status: creating ompi/mca/mpool/sm/Makefile
config.status: creating ompi/mca/mtl/Makefile
config.status: creating ompi/mca/mtl/mx/Makefile
config.status: creating ompi/mca/mtl/mxm/Makefile
config.status: creating ompi/mca/mtl/portals/Makefile
config.status: creating ompi/mca/mtl/psm/Makefile
config.status: creating ompi/mca/op/Makefile
config.status: creating ompi/mca/osc/Makefile
config.status: creating ompi/mca/osc/pt2pt/Makefile
config.status: creating ompi/mca/osc/rdma/Makefile
config.status: creating ompi/mca/pml/Makefile
config.status: creating ompi/mca/pml/bfo/Makefile
config.status: creating ompi/mca/pml/cm/Makefile
config.status: creating ompi/mca/pml/crcpw/Makefile
config.status: creating ompi/mca/pml/csum/Makefile
config.status: creating ompi/mca/pml/ob1/Makefile
config.status: creating ompi/mca/pml/v/mca/vprotocol/Makefile
config.status: creating ompi/mca/pml/v/mca/vprotocol/pessimist/Makefile
config.status: creating ompi/mca/pml/v/Makefile
config.status: creating ompi/mca/pubsub/Makefile
config.status: creating ompi/mca/pubsub/orte/Makefile
config.status: creating ompi/mca/pubsub/pmi/Makefile
config.status: creating ompi/mca/rcache/Makefile
config.status: creating ompi/mca/rcache/vma/Makefile
config.status: creating ompi/mca/topo/Makefile
config.status: creating ompi/mca/topo/unity/Makefile
config.status: creating ompi/contrib/libompitrace/Makefile
config.status: creating ompi/mpiext/Makefile
config.status: creating ompi/mpiext/affinity/Makefile
config.status: creating ompi/mpiext/example/Makefile
config.status: creating ompi/contrib/vt/Makefile
config.status: creating ompi/contrib/vt/wrappers/Makefile
config.status: creating ompi/contrib/vt/wrappers/mpicc-vt-wrapper-data.txt
config.status: creating ompi/contrib/vt/wrappers/mpic++-vt-wrapper-data.txt
config.status: creating ompi/contrib/vt/wrappers/mpif77-vt-wrapper-data.txt
config.status: creating ompi/contrib/vt/wrappers/mpif90-vt-wrapper-data.txt
config.status: creating Makefile
config.status: creating config/Makefile
config.status: creating contrib/Makefile
config.status: creating test/Makefile
config.status: creating test/event/Makefile
config.status: creating test/asm/Makefile
config.status: creating test/datatype/Makefile
config.status: creating test/class/Makefile
config.status: creating test/support/Makefile
config.status: creating test/threads/Makefile
config.status: creating test/util/Makefile
config.status: creating opal/Makefile
config.status: creating opal/etc/Makefile
config.status: creating opal/include/Makefile
config.status: creating opal/asm/Makefile
config.status: creating opal/datatype/Makefile
config.status: creating opal/event/Makefile
config.status: creating opal/event/compat/Makefile
config.status: creating opal/event/compat/sys/Makefile
config.status: creating opal/util/Makefile
config.status: creating opal/util/keyval/Makefile
config.status: creating opal/mca/base/Makefile
config.status: creating opal/tools/wrappers/Makefile
config.status: creating opal/tools/wrappers/opalcc-wrapper-data.txt
config.status: creating opal/tools/wrappers/opalc++-wrapper-data.txt
config.status: creating opal/tools/wrappers/opal.pc
config.status: creating opal/tools/opal-checkpoint/Makefile
config.status: creating opal/tools/opal-restart/Makefile
config.status: creating orte/Makefile
config.status: creating orte/include/Makefile
config.status: creating orte/etc/Makefile
config.status: creating orte/tools/orted/Makefile
config.status: creating orte/tools/orterun/Makefile
config.status: creating orte/tools/wrappers/Makefile
config.status: creating orte/tools/wrappers/ortecc-wrapper-data.txt
config.status: creating orte/tools/wrappers/ortec++-wrapper-data.txt
config.status: creating orte/tools/wrappers/orte.pc
config.status: creating orte/tools/orte-checkpoint/Makefile
config.status: creating orte/tools/orte-iof/Makefile
config.status: creating orte/tools/orte-restart/Makefile
config.status: creating orte/tools/orte-ps/Makefile
config.status: creating orte/tools/orte-clean/Makefile
config.status: creating orte/tools/orte-top/Makefile
config.status: creating orte/tools/orte-bootproxy/Makefile
config.status: creating ompi/Makefile
config.status: creating ompi/etc/Makefile
config.status: creating ompi/include/Makefile
config.status: creating ompi/include/mpif.h
config.status: creating ompi/include/mpif-config.h
config.status: creating ompi/datatype/Makefile
config.status: creating ompi/debuggers/Makefile
config.status: creating ompi/mpi/c/Makefile
config.status: creating ompi/mpi/c/profile/Makefile
config.status: creating ompi/mpi/cxx/Makefile
config.status: creating ompi/mpi/f77/Makefile
config.status: creating ompi/mpi/f77/profile/Makefile
config.status: creating ompi/mpi/f90/Makefile
config.status: creating ompi/mpi/f90/fortran_kinds.sh
config.status: creating ompi/mpi/f90/fortran_sizes.h
config.status: creating ompi/mpi/f90/scripts/Makefile
config.status: creating ompi/tools/ompi_info/Makefile
config.status: creating ompi/tools/wrappers/Makefile
config.status: creating ompi/tools/wrappers/mpicc-wrapper-data.txt
config.status: creating ompi/tools/wrappers/mpic++-wrapper-data.txt
config.status: creating ompi/tools/wrappers/mpif77-wrapper-data.txt
config.status: creating ompi/tools/wrappers/mpif90-wrapper-data.txt
config.status: creating ompi/tools/wrappers/ompi.pc
config.status: creating ompi/tools/wrappers/ompi-c.pc
config.status: creating ompi/tools/wrappers/ompi-cxx.pc
config.status: creating ompi/tools/wrappers/ompi-f77.pc
config.status: creating ompi/tools/wrappers/ompi-f90.pc
config.status: creating ompi/tools/ortetools/Makefile
config.status: creating ompi/tools/ompi-server/Makefile
config.status: creating ompi/tools/ompi-probe/Makefile
config.status: creating ompi/tools/ompi-profiler/Makefile
config.status: creating opal/include/opal_config.h
config.status: creating orte/include/orte_config.h
config.status: creating ompi/include/ompi_config.h
config.status: creating ompi/include/mpi.h
config.status: creating ompi/include/mpi_portable_platform.h
config.status: creating opal/mca/hwloc/hwloc132/hwloc/include/private/autogen/config.h
config.status: creating opal/mca/hwloc/hwloc132/hwloc/include/hwloc/autogen/config.h
config.status: executing depfiles commands
config.status: executing libtool commands

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