Created
October 20, 2012 16:25
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tmap-3.2.0 + Homebrew install log, OSX 10.8.2 with --enable-perftools - 'rpl_malloc' undeclared
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| $ brew install -vd --perf tmap | |
| /usr/local/bin/brew: loading /usr/local/Library/Formula/tmap.rb | |
| /usr/local/bin/brew: loading /usr/local/Library/Formula/automake.rb | |
| /usr/local/bin/brew: loading /usr/local/Library/Formula/autoconf.rb | |
| /usr/local/bin/brew: loading /usr/local/Library/Formula/libtool.rb | |
| /usr/local/bin/brew: loading /usr/local/Library/Formula/google-perftools.rb | |
| /usr/local/Library/Formula/tmap.rb: loading /usr/local/Library/Formula/automake.rb | |
| /usr/local/Library/Formula/tmap.rb: loading /usr/local/Library/Formula/autoconf.rb | |
| /usr/local/Library/Formula/tmap.rb: loading /usr/local/Library/Formula/libtool.rb | |
| /usr/local/Library/Formula/tmap.rb: loading /usr/local/Library/Formula/google-perftools.rb | |
| ==> Cloning https://github.com/iontorrent/TMAP.git | |
| git status -s | |
| Updating /Library/Caches/Homebrew/tmap--git | |
| git config remote.origin.url https://github.com/iontorrent/TMAP.git | |
| git config remote.origin.fetch +refs/tags/tmap.3.2.0:refs/tags/tmap.3.2.0 | |
| git fetch origin | |
| ==> Checking out tag tmap.3.2.0 | |
| git checkout tmap.3.2.0 -- | |
| HEAD is now at 115c314... * moving master to 3.2.0 | |
| git checkout-index -a -f --prefix=/private/tmp/tmap-rhOV/ | |
| git submodule init | |
| Submodule 'src/samtools' () registered for path 'src/samtools' | |
| git submodule update | |
| git submodule --quiet foreach --recursive git checkout-index -a -f "--prefix=/private/tmp/tmap-rhOV/$path/" | |
| ==> Patching | |
| /usr/bin/patch -f -p1 -i 000-homebrew.diff | |
| patching file configure.ac | |
| ==> sh autogen.sh | |
| sh autogen.sh | |
| running: aclocal | |
| running: autoheader | |
| running: automake -a | |
| running: autoconf | |
| ==> ./configure --disable-dependency-tracking --prefix=/usr/local/Cellar/tmap/3.2.0 --enable-perftools | |
| ./configure --disable-dependency-tracking --prefix=/usr/local/Cellar/tmap/3.2.0 --enable-perftools | |
| checking for a BSD-compatible install... /usr/bin/install -c | |
| checking whether build environment is sane... yes | |
| checking for a thread-safe mkdir -p... config/install-sh -c -d | |
| checking for gawk... no | |
| checking for mawk... no | |
| checking for nawk... no | |
| checking for awk... awk | |
| checking whether make sets $(MAKE)... yes | |
| checking build system type... x86_64-apple-darwin12.2.0 | |
| checking for gcc... /usr/bin/llvm-gcc | |
| checking whether the C compiler works... yes | |
| checking for C compiler default output file name... a.out | |
| checking for suffix of executables... | |
| checking whether we are cross compiling... no | |
| checking for suffix of object files... o | |
| checking whether we are using the GNU C compiler... yes | |
| checking whether /usr/bin/llvm-gcc accepts -g... yes | |
| checking for /usr/bin/llvm-gcc option to accept ISO C89... none needed | |
| checking for style of include used by make... GNU | |
| checking dependency style of /usr/bin/llvm-gcc... none | |
| checking whether /usr/bin/llvm-gcc and cc understand -c and -o together... yes | |
| checking whether we are using the GNU C++ compiler... yes | |
| checking whether /usr/bin/llvm-g++ accepts -g... yes | |
| checking dependency style of /usr/bin/llvm-g++... none | |
| checking whether /usr/bin/llvm-g++ understands -c and -o together... yes | |
| checking how to run the C preprocessor... /usr/bin/llvm-gcc -E | |
| checking for grep that handles long lines and -e... /usr/bin/grep | |
| checking for egrep... /usr/bin/grep -E | |
| checking for ANSI C header files... yes | |
| checking for sys/types.h... yes | |
| checking for sys/stat.h... yes | |
| checking for stdlib.h... yes | |
| checking for string.h... yes | |
| checking for memory.h... yes | |
| checking for strings.h... yes | |
| checking for inttypes.h... yes | |
| checking for stdint.h... yes | |
| checking for unistd.h... yes | |
| checking minix/config.h usability... no | |
| checking minix/config.h presence... no | |
| checking for minix/config.h... no | |
| checking whether it is safe to define __EXTENSIONS__... yes | |
| checking whether the git revision is available... no | |
| checking for BZ2_bzRead in -lbz2... yes | |
| checking for malloc in -ltcmalloc... yes | |
| configure: WARNING: "Using 64-bit SA intervals; Genome sizes greater than 4Gb are supported" | |
| checking for an ANSI C-conforming const... yes | |
| checking for working volatile... yes | |
| checking for inline... inline | |
| checking for stdlib.h... (cached) yes | |
| checking for GNU libc compatible malloc... no | |
| checking for stdlib.h... (cached) yes | |
| checking for GNU libc compatible realloc... no | |
| checking for size_t... yes | |
| checking for working alloca.h... yes | |
| checking for alloca... yes | |
| checking for error_at_line... no | |
| checking for _LARGEFILE_SOURCE value needed for large files... no | |
| checking for working memcmp... no | |
| checking sys/select.h usability... yes | |
| checking sys/select.h presence... yes | |
| checking for sys/select.h... yes | |
| checking sys/socket.h usability... yes | |
| checking sys/socket.h presence... yes | |
| checking for sys/socket.h... yes | |
| checking types of arguments for select... int,fd_set *,struct timeval * | |
| checking whether lstat correctly handles trailing slash... no | |
| checking whether stat accepts an empty string... yes | |
| checking for working strtod... no | |
| checking for pow... yes | |
| checking for vprintf... yes | |
| checking for _doprnt... no | |
| checking for gzread in -lz... yes | |
| checking for pow in -lm... yes | |
| checking for pthread_create in -lpthread... yes | |
| checking for pow... (cached) yes | |
| checking for strdup... yes | |
| checking for memset... yes | |
| checking for strchr... yes | |
| checking for strdup... (cached) yes | |
| checking for strstr... yes | |
| checking for memmove... yes | |
| checking for getopt_long... yes | |
| checking for gettimeofday... yes | |
| checking for gethostbyaddr... yes | |
| checking for gethostbyname... yes | |
| checking for memchr... yes | |
| checking for select... yes | |
| checking for socket... yes | |
| checking for sqrt... yes | |
| checking for strerror... yes | |
| checking for strtol... yes | |
| checking for int8_t... yes | |
| checking for int16_t... yes | |
| checking for int32_t... yes | |
| checking for int64_t... yes | |
| checking for uint8_t... yes | |
| checking for uint16_t... yes | |
| checking for uint32_t... yes | |
| checking for uint64_t... yes | |
| checking for size_t... (cached) yes | |
| checking for off_t... yes | |
| checking return type of signal handlers... void | |
| checking for ssize_t... yes | |
| checking size of short int... 0 | |
| checking size of int... 0 | |
| checking size of long int... 0 | |
| checking for ANSI C header files... (cached) yes | |
| checking for stdbool.h that conforms to C99... yes | |
| checking for _Bool... yes | |
| checking whether time.h and sys/time.h may both be included... yes | |
| checking for stdlib.h... (cached) yes | |
| checking stdio.h usability... yes | |
| checking stdio.h presence... yes | |
| checking for stdio.h... yes | |
| checking for stdint.h... (cached) yes | |
| checking for string.h... (cached) yes | |
| checking sys/time.h usability... yes | |
| checking sys/time.h presence... yes | |
| checking for sys/time.h... yes | |
| checking for unistd.h... (cached) yes | |
| checking float.h usability... yes | |
| checking float.h presence... yes | |
| checking for float.h... yes | |
| checking zlib.h usability... yes | |
| checking zlib.h presence... yes | |
| checking for zlib.h... yes | |
| checking bzlib.h usability... yes | |
| checking bzlib.h presence... yes | |
| checking for bzlib.h... yes | |
| checking pthread.h usability... yes | |
| checking pthread.h presence... yes | |
| checking for pthread.h... yes | |
| checking limits.h usability... yes | |
| checking limits.h presence... yes | |
| checking for limits.h... yes | |
| checking netinet/in.h usability... yes | |
| checking netinet/in.h presence... yes | |
| checking for netinet/in.h... yes | |
| checking emmintrin.h usability... yes | |
| checking emmintrin.h presence... yes | |
| checking for emmintrin.h... yes | |
| checking getopt.h usability... yes | |
| checking getopt.h presence... yes | |
| checking for getopt.h... yes | |
| checking arpa/inet.h usability... yes | |
| checking arpa/inet.h presence... yes | |
| checking for arpa/inet.h... yes | |
| checking fcntl.h usability... yes | |
| checking fcntl.h presence... yes | |
| checking for fcntl.h... yes | |
| checking netdb.h usability... yes | |
| checking netdb.h presence... yes | |
| checking for netdb.h... yes | |
| checking stddef.h usability... yes | |
| checking stddef.h presence... yes | |
| checking for stddef.h... yes | |
| checking for sys/socket.h... (cached) yes | |
| checking wchar.h usability... yes | |
| checking wchar.h presence... yes | |
| checking for wchar.h... yes | |
| checking curses.h usability... yes | |
| checking curses.h presence... yes | |
| checking for curses.h... yes | |
| checking xcurses.h usability... no | |
| checking xcurses.h presence... no | |
| checking for xcurses.h... no | |
| checking that generated files are newer than configure... done | |
| configure: creating ./config.status | |
| config.status: creating Makefile | |
| config.status: creating config.h | |
| config.status: executing depfiles commands | |
| ==> make | |
| make | |
| make all-recursive | |
| Making all in . | |
| /usr/bin/llvm-gcc -DHAVE_CONFIG_H -I. -Os -w -pipe -mmacosx-version-min=10.8 -march=core2 -msse4 -pthread -D_TMAP_BWT_RUN_TYPE=0 -D_USE_KNETFILE -Isrc/samtools -DSAMTOOLS_MAIN -c -o src/util/tmap_alloc.o src/util/tmap_alloc.c | |
| /usr/bin/llvm-gcc -DHAVE_CONFIG_H -I. -Os -w -pipe -mmacosx-version-min=10.8 -march=core2 -msse4 -pthread -D_TMAP_BWT_RUN_TYPE=0 -D_USE_KNETFILE -Isrc/samtools -DSAMTOOLS_MAIN -c -o src/util/tmap_definitions.o src/util/tmap_definitions.c | |
| /usr/bin/llvm-gcc -DHAVE_CONFIG_H -I. -Os -w -pipe -mmacosx-version-min=10.8 -march=core2 -msse4 -pthread -D_TMAP_BWT_RUN_TYPE=0 -D_USE_KNETFILE -Isrc/samtools -DSAMTOOLS_MAIN -c -o src/util/tmap_error.o src/util/tmap_error.c | |
| /usr/bin/llvm-gcc -DHAVE_CONFIG_H -I. -Os -w -pipe -mmacosx-version-min=10.8 -march=core2 -msse4 -pthread -D_TMAP_BWT_RUN_TYPE=0 -D_USE_KNETFILE -Isrc/samtools -DSAMTOOLS_MAIN -c -o src/util/tmap_rand.o src/util/tmap_rand.c | |
| /usr/bin/llvm-gcc -DHAVE_CONFIG_H -I. -Os -w -pipe -mmacosx-version-min=10.8 -march=core2 -msse4 -pthread -D_TMAP_BWT_RUN_TYPE=0 -D_USE_KNETFILE -Isrc/samtools -DSAMTOOLS_MAIN -c -o src/util/tmap_time.o src/util/tmap_time.c | |
| /usr/bin/llvm-gcc -DHAVE_CONFIG_H -I. -Os -w -pipe -mmacosx-version-min=10.8 -march=core2 -msse4 -pthread -D_TMAP_BWT_RUN_TYPE=0 -D_USE_KNETFILE -Isrc/samtools -DSAMTOOLS_MAIN -c -o src/util/tmap_fibheap.o src/util/tmap_fibheap.c | |
| /usr/bin/llvm-gcc -DHAVE_CONFIG_H -I. -Os -w -pipe -mmacosx-version-min=10.8 -march=core2 -msse4 -pthread -D_TMAP_BWT_RUN_TYPE=0 -D_USE_KNETFILE -Isrc/samtools -DSAMTOOLS_MAIN -c -o src/util/tmap_progress.o src/util/tmap_progress.c | |
| /usr/bin/llvm-gcc -DHAVE_CONFIG_H -I. -Os -w -pipe -mmacosx-version-min=10.8 -march=core2 -msse4 -pthread -D_TMAP_BWT_RUN_TYPE=0 -D_USE_KNETFILE -Isrc/samtools -DSAMTOOLS_MAIN -c -o src/util/tmap_string.o src/util/tmap_string.c | |
| /usr/bin/llvm-gcc -DHAVE_CONFIG_H -I. -Os -w -pipe -mmacosx-version-min=10.8 -march=core2 -msse4 -pthread -D_TMAP_BWT_RUN_TYPE=0 -D_USE_KNETFILE -Isrc/samtools -DSAMTOOLS_MAIN -c -o src/util/tmap_levenshtein.o src/util/tmap_levenshtein.c | |
| /usr/bin/llvm-gcc -DHAVE_CONFIG_H -I. -Os -w -pipe -mmacosx-version-min=10.8 -march=core2 -msse4 -pthread -D_TMAP_BWT_RUN_TYPE=0 -D_USE_KNETFILE -Isrc/samtools -DSAMTOOLS_MAIN -c -o src/util/tmap_sam_convert.o src/util/tmap_sam_convert.c | |
| /usr/bin/llvm-gcc -DHAVE_CONFIG_H -I. -Os -w -pipe -mmacosx-version-min=10.8 -march=core2 -msse4 -pthread -D_TMAP_BWT_RUN_TYPE=0 -D_USE_KNETFILE -Isrc/samtools -DSAMTOOLS_MAIN -c -o src/seq/tmap_fq.o src/seq/tmap_fq.c | |
| /usr/bin/llvm-gcc -DHAVE_CONFIG_H -I. -Os -w -pipe -mmacosx-version-min=10.8 -march=core2 -msse4 -pthread -D_TMAP_BWT_RUN_TYPE=0 -D_USE_KNETFILE -Isrc/samtools -DSAMTOOLS_MAIN -c -o src/seq/tmap_sff.o src/seq/tmap_sff.c | |
| /usr/bin/llvm-gcc -DHAVE_CONFIG_H -I. -Os -w -pipe -mmacosx-version-min=10.8 -march=core2 -msse4 -pthread -D_TMAP_BWT_RUN_TYPE=0 -D_USE_KNETFILE -Isrc/samtools -DSAMTOOLS_MAIN -c -o src/seq/tmap_sam.o src/seq/tmap_sam.c | |
| /usr/bin/llvm-gcc -DHAVE_CONFIG_H -I. -Os -w -pipe -mmacosx-version-min=10.8 -march=core2 -msse4 -pthread -D_TMAP_BWT_RUN_TYPE=0 -D_USE_KNETFILE -Isrc/samtools -DSAMTOOLS_MAIN -c -o src/seq/tmap_seq.o src/seq/tmap_seq.c | |
| /usr/bin/llvm-gcc -DHAVE_CONFIG_H -I. -Os -w -pipe -mmacosx-version-min=10.8 -march=core2 -msse4 -pthread -D_TMAP_BWT_RUN_TYPE=0 -D_USE_KNETFILE -Isrc/samtools -DSAMTOOLS_MAIN -c -o src/seq/tmap_seqs.o src/seq/tmap_seqs.c | |
| /usr/bin/llvm-gcc -DHAVE_CONFIG_H -I. -Os -w -pipe -mmacosx-version-min=10.8 -march=core2 -msse4 -pthread -D_TMAP_BWT_RUN_TYPE=0 -D_USE_KNETFILE -Isrc/samtools -DSAMTOOLS_MAIN -c -o src/io/tmap_file.o src/io/tmap_file.c | |
| /usr/bin/llvm-gcc -DHAVE_CONFIG_H -I. -Os -w -pipe -mmacosx-version-min=10.8 -march=core2 -msse4 -pthread -D_TMAP_BWT_RUN_TYPE=0 -D_USE_KNETFILE -Isrc/samtools -DSAMTOOLS_MAIN -c -o src/io/tmap_fq_io.o src/io/tmap_fq_io.c | |
| /usr/bin/llvm-gcc -DHAVE_CONFIG_H -I. -Os -w -pipe -mmacosx-version-min=10.8 -march=core2 -msse4 -pthread -D_TMAP_BWT_RUN_TYPE=0 -D_USE_KNETFILE -Isrc/samtools -DSAMTOOLS_MAIN -c -o src/io/tmap_sff_io.o src/io/tmap_sff_io.c | |
| /usr/bin/llvm-gcc -DHAVE_CONFIG_H -I. -Os -w -pipe -mmacosx-version-min=10.8 -march=core2 -msse4 -pthread -D_TMAP_BWT_RUN_TYPE=0 -D_USE_KNETFILE -Isrc/samtools -DSAMTOOLS_MAIN -c -o src/io/tmap_sam_io.o src/io/tmap_sam_io.c | |
| /usr/bin/llvm-gcc -DHAVE_CONFIG_H -I. -Os -w -pipe -mmacosx-version-min=10.8 -march=core2 -msse4 -pthread -D_TMAP_BWT_RUN_TYPE=0 -D_USE_KNETFILE -Isrc/samtools -DSAMTOOLS_MAIN -c -o src/io/tmap_seq_io.o src/io/tmap_seq_io.c | |
| /usr/bin/llvm-gcc -DHAVE_CONFIG_H -I. -Os -w -pipe -mmacosx-version-min=10.8 -march=core2 -msse4 -pthread -D_TMAP_BWT_RUN_TYPE=0 -D_USE_KNETFILE -Isrc/samtools -DSAMTOOLS_MAIN -c -o src/io/tmap_seqs_io.o src/io/tmap_seqs_io.c | |
| /usr/bin/llvm-gcc -DHAVE_CONFIG_H -I. -Os -w -pipe -mmacosx-version-min=10.8 -march=core2 -msse4 -pthread -D_TMAP_BWT_RUN_TYPE=0 -D_USE_KNETFILE -Isrc/samtools -DSAMTOOLS_MAIN -c -o src/index/tmap_bwt.o src/index/tmap_bwt.c | |
| /usr/bin/llvm-gcc -DHAVE_CONFIG_H -I. -Os -w -pipe -mmacosx-version-min=10.8 -march=core2 -msse4 -pthread -D_TMAP_BWT_RUN_TYPE=0 -D_USE_KNETFILE -Isrc/samtools -DSAMTOOLS_MAIN -c -o src/index/tmap_bwt_aux.o src/index/tmap_bwt_aux.c | |
| /usr/bin/llvm-gcc -DHAVE_CONFIG_H -I. -Os -w -pipe -mmacosx-version-min=10.8 -march=core2 -msse4 -pthread -D_TMAP_BWT_RUN_TYPE=0 -D_USE_KNETFILE -Isrc/samtools -DSAMTOOLS_MAIN -c -o src/index/tmap_bwtl.o src/index/tmap_bwtl.c | |
| /usr/bin/llvm-gcc -DHAVE_CONFIG_H -I. -Os -w -pipe -mmacosx-version-min=10.8 -march=core2 -msse4 -pthread -D_TMAP_BWT_RUN_TYPE=0 -D_USE_KNETFILE -Isrc/samtools -DSAMTOOLS_MAIN -c -o src/index/tmap_bwt_gen.o src/index/tmap_bwt_gen.c | |
| /usr/bin/llvm-gcc -DHAVE_CONFIG_H -I. -Os -w -pipe -mmacosx-version-min=10.8 -march=core2 -msse4 -pthread -D_TMAP_BWT_RUN_TYPE=0 -D_USE_KNETFILE -Isrc/samtools -DSAMTOOLS_MAIN -c -o src/index/tmap_bwt_match.o src/index/tmap_bwt_match.c | |
| /usr/bin/llvm-gcc -DHAVE_CONFIG_H -I. -Os -w -pipe -mmacosx-version-min=10.8 -march=core2 -msse4 -pthread -D_TMAP_BWT_RUN_TYPE=0 -D_USE_KNETFILE -Isrc/samtools -DSAMTOOLS_MAIN -c -o src/index/tmap_bwt_match_hash.o src/index/tmap_bwt_match_hash.c | |
| /usr/bin/llvm-gcc -DHAVE_CONFIG_H -I. -Os -w -pipe -mmacosx-version-min=10.8 -march=core2 -msse4 -pthread -D_TMAP_BWT_RUN_TYPE=0 -D_USE_KNETFILE -Isrc/samtools -DSAMTOOLS_MAIN -c -o src/index/tmap_bwt_smem.o src/index/tmap_bwt_smem.c | |
| /usr/bin/llvm-gcc -DHAVE_CONFIG_H -I. -Os -w -pipe -mmacosx-version-min=10.8 -march=core2 -msse4 -pthread -D_TMAP_BWT_RUN_TYPE=0 -D_USE_KNETFILE -Isrc/samtools -DSAMTOOLS_MAIN -c -o src/index/tmap_index.o src/index/tmap_index.c | |
| /usr/bin/llvm-gcc -DHAVE_CONFIG_H -I. -Os -w -pipe -mmacosx-version-min=10.8 -march=core2 -msse4 -pthread -D_TMAP_BWT_RUN_TYPE=0 -D_USE_KNETFILE -Isrc/samtools -DSAMTOOLS_MAIN -c -o src/index/tmap_refseq.o src/index/tmap_refseq.c | |
| /usr/bin/llvm-gcc -DHAVE_CONFIG_H -I. -Os -w -pipe -mmacosx-version-min=10.8 -march=core2 -msse4 -pthread -D_TMAP_BWT_RUN_TYPE=0 -D_USE_KNETFILE -Isrc/samtools -DSAMTOOLS_MAIN -c -o src/index/tmap_sa.o src/index/tmap_sa.c | |
| /usr/bin/llvm-gcc -DHAVE_CONFIG_H -I. -Os -w -pipe -mmacosx-version-min=10.8 -march=core2 -msse4 -pthread -D_TMAP_BWT_RUN_TYPE=0 -D_USE_KNETFILE -Isrc/samtools -DSAMTOOLS_MAIN -c -o src/index/tmap_sa_aux.o src/index/tmap_sa_aux.c | |
| /usr/bin/llvm-gcc -DHAVE_CONFIG_H -I. -Os -w -pipe -mmacosx-version-min=10.8 -march=core2 -msse4 -pthread -D_TMAP_BWT_RUN_TYPE=0 -D_USE_KNETFILE -Isrc/samtools -DSAMTOOLS_MAIN -c -o src/index/tmap_index_size.o src/index/tmap_index_size.c | |
| /usr/bin/llvm-gcc -DHAVE_CONFIG_H -I. -Os -w -pipe -mmacosx-version-min=10.8 -march=core2 -msse4 -pthread -D_TMAP_BWT_RUN_TYPE=0 -D_USE_KNETFILE -Isrc/samtools -DSAMTOOLS_MAIN -c -o src/sw/tmap_sw.o src/sw/tmap_sw.c | |
| /usr/bin/llvm-gcc -DHAVE_CONFIG_H -I. -Os -w -pipe -mmacosx-version-min=10.8 -march=core2 -msse4 -pthread -D_TMAP_BWT_RUN_TYPE=0 -D_USE_KNETFILE -Isrc/samtools -DSAMTOOLS_MAIN -c -o src/sw/tmap_fsw.o src/sw/tmap_fsw.c | |
| /usr/bin/llvm-gcc -DHAVE_CONFIG_H -I. -Os -w -pipe -mmacosx-version-min=10.8 -march=core2 -msse4 -pthread -D_TMAP_BWT_RUN_TYPE=0 -D_USE_KNETFILE -Isrc/samtools -DSAMTOOLS_MAIN -c -o src/sw/tmap_vsw_definitions.o src/sw/tmap_vsw_definitions.c | |
| /usr/bin/llvm-gcc -DHAVE_CONFIG_H -I. -Os -w -pipe -mmacosx-version-min=10.8 -march=core2 -msse4 -pthread -D_TMAP_BWT_RUN_TYPE=0 -D_USE_KNETFILE -Isrc/samtools -DSAMTOOLS_MAIN -c -o src/sw/tmap_vsw.o src/sw/tmap_vsw.c | |
| /usr/bin/llvm-g++ -DHAVE_CONFIG_H -I. -Os -w -pipe -mmacosx-version-min=10.8 -march=core2 -msse4 -pthread -D__STDC_LIMIT_MACROS -D__STDC_CONSTANT_MACROS -D__STDC_FORMAT_MACROS -c -o src/sw/lib/vsw.o src/sw/lib/vsw.cpp | |
| /usr/bin/llvm-g++ -DHAVE_CONFIG_H -I. -Os -w -pipe -mmacosx-version-min=10.8 -march=core2 -msse4 -pthread -D__STDC_LIMIT_MACROS -D__STDC_CONSTANT_MACROS -D__STDC_FORMAT_MACROS -c -o src/sw/lib/vsw16.o src/sw/lib/vsw16.cpp | |
| /usr/bin/llvm-g++ -DHAVE_CONFIG_H -I. -Os -w -pipe -mmacosx-version-min=10.8 -march=core2 -msse4 -pthread -D__STDC_LIMIT_MACROS -D__STDC_CONSTANT_MACROS -D__STDC_FORMAT_MACROS -c -o src/sw/lib/sw-vector.o src/sw/lib/sw-vector.cpp | |
| /usr/bin/llvm-g++ -DHAVE_CONFIG_H -I. -Os -w -pipe -mmacosx-version-min=10.8 -march=core2 -msse4 -pthread -D__STDC_LIMIT_MACROS -D__STDC_CONSTANT_MACROS -D__STDC_FORMAT_MACROS -c -o src/sw/lib/Solution.o src/sw/lib/Solution.cpp | |
| /usr/bin/llvm-g++ -DHAVE_CONFIG_H -I. -Os -w -pipe -mmacosx-version-min=10.8 -march=core2 -msse4 -pthread -D__STDC_LIMIT_MACROS -D__STDC_CONSTANT_MACROS -D__STDC_FORMAT_MACROS -c -o src/sw/lib/Solution1.o src/sw/lib/Solution1.cpp | |
| In file included from /usr/llvm-gcc-4.2/bin/../lib/gcc/i686-apple-darwin11/4.2.1/include/xmmintrin.h:45, | |
| from /usr/llvm-gcc-4.2/bin/../lib/gcc/i686-apple-darwin11/4.2.1/include/emmintrin.h:35, | |
| from src/sw/lib/vsw16.h:33, | |
| from src/sw/lib/Solution1.cpp:7: | |
| /usr/llvm-gcc-4.2/bin/../lib/gcc/i686-apple-darwin11/4.2.1/include/mm_malloc.h: In function 'void* _mm_malloc(size_t, size_t)': | |
| /usr/llvm-gcc-4.2/bin/../lib/gcc/i686-apple-darwin11/4.2.1/include/mm_malloc.h:56: error: 'rpl_malloc' was not declared in this scope | |
| make[2]: *** [src/sw/lib/Solution1.o] Error 1 | |
| make[1]: *** [all-recursive] Error 1 | |
| make: *** [all] Error 2 |
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