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March 13, 2021 15:17
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import tensorflow as tf | |
from tensorflow.keras import Model | |
dense_net_121 = tf.keras.applications.DenseNet121(input_shape=[256,256,3],include_top=False,pooling='avg') | |
base_model_output = tf.keras.layers.Dense(units=14,activation='relu')(dense_net_121.output) | |
base_model = Model(inputs = dense_net_121.input,outputs=base_model_output) | |
base_model.load_weights('brucechou1983_CheXNet_Keras_0.3.0_weights.h5') | |
output_layer = tf.keras.layers.Dense(1,activation='sigmoid')(base_model.layers[-2].output) | |
model = Model(inputs=base_model.inputs, outputs=output_layer) | |
model1=tf.keras.layers.UpSampling2D((2,2))(model.layers[-3].output) | |
model1=tf.keras.layers.concatenate([model1,model.get_layer('pool4_conv').output]) | |
model1=tf.keras.layers.Conv2D(256,(3,3),padding='same',use_bias=False,kernel_initializer='glorot_uniform')(model1) | |
model1=tf.keras.layers.BatchNormalization()(model1) | |
model1=tf.keras.layers.Activation('relu')(model1) | |
model1=tf.keras.layers.Conv2D(256,(3,3),padding='same',use_bias=False,kernel_initializer='glorot_uniform')(model1) | |
model1=tf.keras.layers.BatchNormalization()(model1) | |
model1=tf.keras.layers.Activation('relu')(model1) | |
model1=tf.keras.layers.UpSampling2D((2,2))(model1) | |
model1=tf.keras.layers.concatenate([model1,model.get_layer('pool3_conv').output]) | |
model1=tf.keras.layers.Conv2D(128,(3,3),padding='same',use_bias=False,kernel_initializer='glorot_uniform')(model1) | |
model1=tf.keras.layers.BatchNormalization()(model1) | |
model1=tf.keras.layers.Activation('relu')(model1) | |
model1=tf.keras.layers.Conv2D(128,(3,3),padding='same',use_bias=False,kernel_initializer='glorot_uniform')(model1) | |
model1= tf.keras.layers.Dropout(0.5)(model1) | |
model1=tf.keras.layers.BatchNormalization()(model1) | |
model1=tf.keras.layers.Activation('relu')(model1) | |
model1=tf.keras.layers.UpSampling2D((2,2))(model1) | |
model1=tf.keras.layers.concatenate([model1,model.get_layer('pool2_conv').output]) | |
model1=tf.keras.layers.Conv2D(64,(3,3),padding='same',use_bias=False,kernel_initializer='glorot_uniform')(model1) | |
model1= tf.keras.layers.Dropout(0.5)(model1) | |
model1=tf.keras.layers.BatchNormalization()(model1) | |
model1=tf.keras.layers.Activation('relu')(model1) | |
model1=tf.keras.layers.Conv2D(64,(3,3),padding='same',use_bias=False,kernel_initializer='glorot_uniform')(model1) | |
model1=tf.keras.layers.BatchNormalization()(model1) | |
model1=tf.keras.layers.Activation('relu')(model1) | |
model1=tf.keras.layers.UpSampling2D((2,2))(model1) | |
model1=tf.keras.layers.concatenate([model1,model.get_layer('conv1/relu').output]) | |
model1=tf.keras.layers.Conv2D(32,(3,3),padding='same',use_bias=False,kernel_initializer='glorot_uniform')(model1) | |
model1=tf.keras.layers.BatchNormalization()(model1) | |
model1=tf.keras.layers.Activation('relu')(model1) | |
model1=tf.keras.layers.Conv2D(32,(3,3),padding='same',use_bias=False,kernel_initializer='glorot_uniform')(model1) | |
model1= tf.keras.layers.Dropout(0.7)(model1) | |
model1=tf.keras.layers.BatchNormalization()(model1) | |
model1=tf.keras.layers.Activation('relu')(model1) | |
model1=tf.keras.layers.UpSampling2D((2,2))(model1) | |
model1=tf.keras.layers.Conv2D(16,(3,3),padding='same',use_bias=False,kernel_initializer='glorot_uniform')(model1) | |
model1=tf.keras.layers.BatchNormalization()(model1) | |
model1=tf.keras.layers.Activation('relu')(model1) | |
model1=tf.keras.layers.Conv2D(16,(3,3),padding='same',use_bias=False,kernel_initializer='glorot_uniform')(model1) | |
model1=tf.keras.layers.BatchNormalization()(model1) | |
model1=tf.keras.layers.Activation('relu')(model1) | |
model1=tf.keras.layers.Conv2D(1,(3,3),padding='same',use_bias=True,kernel_initializer='glorot_uniform')(model1) | |
model1=tf.keras.layers.Activation('sigmoid')(model1) | |
unet_chexnet_model=Model(inputs=model.inputs, outputs=model1) | |
unet_chexnet_model.compile(optimizer=tf.keras.optimizers.Adam(lr=0.0001),loss=combined_loss, metrics=['accuracy',dice_coef]) | |
unet_chexnet_model.summary() |
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