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AidanDelaney/gist:11169020

Created April 22, 2014 07:47
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gistfile1.xml
<?xml version="1.0"?>
<rdf:RDF
xmlns:snap="http://www.ifomis.org/bfo/1.1/snap#"
xmlns:p1="http://purl.org/nbirn/birnlex/ontology/obo-foundry/core/obo-foundry-core-full-import.owl#"
xmlns:uboobo="http://ccdb.ucsd.edu/NIF/BIRNLex-OBO-UBO.owl#"
xmlns:bfobridge="http://obofoundry.org/ro/ro_bfo_bridge.owl#"
xmlns="http://ontology.neuinfo.org/NIF/1.0/DigitalEntities/BIRNLex-OBI-proxy.owl#"
xmlns:p3="http://purl.org/nbirn/birnlex/ontology/BIRNLex-OBO-UBO.owl#"
xmlns:swrl="http://www.w3.org/2003/11/swrl#"
xmlns:rdfs="http://www.w3.org/2000/01/rdf-schema#"
xmlns:owl="http://www.w3.org/2002/07/owl#"
xmlns:xsp="http://www.owl-ontologies.com/2005/08/07/xsp.owl#"
xmlns:ro="http://www.obofoundry.org/ro/ro.owl#"
xmlns:swrlb="http://www.w3.org/2003/11/swrlb#"
xmlns:p4="http://ccdb.ucsd.edu/NIF/BIRNLex_annotation_properties#"
xmlns:birn_annot="http://ccdb.ucsd.edu/NIF/BIRNLex_annotation_properties.owl#"
xmlns:p5="http://purl.org/nbirn/birnlex/ontology/annotation/OBO_annotation_properties.owl#"
xmlns:protege="http://protege.stanford.edu/plugins/owl/protege#"
xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#"
xmlns:xsd="http://www.w3.org/2001/XMLSchema#"
xmlns:span="http://www.ifomis.org/bfo/1.1/span#"
xmlns:seq="http://www.berkeleybop.org/ontologies/obo-all/sequence/sequence.owl#"
xmlns:p2="http://ccdb.ucsd.edu/NIF/NIF-Investigation.owl#"
xml:base="http://ontology.neuinfo.org/NIF/1.0/Backend/NIF-PURL-BACKEND.owl">
<owl:Ontology rdf:about="">
<!--<owl:imports rdf:resource="http://obofoundry.org/ro/ro_bfo_bridge.owl"/>
<owl:imports rdf:resource="http://www.obofoundry.org/ro/ro.owl"/>
<owl:imports rdf:resource="http://www.ifomis.org/bfo/1.1"/> -->
</owl:Ontology>
<!-- purl nif Fixes: follwing lines are added to make the nif purl work for now. Fahim Imam, Jan 15, 2009-->
<rdfs:Class rdf:about="http://purl.org/nbirn/birnlex/ontology/BIRNLex-OBI-proxy.owl#birnlex_11022"/>
<rdfs:Class rdf:about="http://purl.org/nbirn/birnlex/ontology/BIRNLex-OBI-proxy.owl#birnlex_11013"/>
<rdfs:Class rdf:about="http://purl.org/nbirn/birnlex/ontology/BIRNLex-OBI-proxy.owl#birnlex_11030"/>
<rdfs:Class rdf:about="http://purl.org/nbirn/birnlex/ontology/BIRNLex-OBI-proxy.owl#birnlex_11029"/>
<rdfs:Class rdf:about="http://purl.org/nbirn/birnlex/ontology/BIRNLex-OBI-proxy.owl#birnlex_11027"/>
<rdfs:Class rdf:about="http://purl.org/nbirn/birnlex/ontology/BIRNLex-Anatomy.owl#birnlex_1304"/>
<rdfs:Class rdf:about="http://purl.org/nbirn/birnlex/ontology/BIRNLex-OBI-proxy.owl#birnlex_11020"/>
<!--<rdfs:Class rdf:about="http://purl.org/nbirn/birnlex/ontology/annotation/BIRNLex_annotation_properties.owl#_birnlex_limbo_class"/>
<rdfs:Class rdf:about="http://purl.org/nbirn/birnlex/ontology/annotation/BIRNLex_annotation_properties.owl#_birnlex_retired_class"/> -->
<rdfs:Class rdf:about="http://purl.org/nbirn/birnlex/ontology/BIRNLex-Anatomy.owl#birnlex_775"/>
<rdfs:Class rdf:about="http://purl.org/nbirn/birnlex/ontology/BIRNLex-OBI-proxy.owl#birnlex_11019"/>
<rdfs:Class rdf:about="http://purl.org/nbirn/birnlex/ontology/BIRNLex-OBI-proxy.owl#birnlex_11005"/>
<rdfs:Class rdf:about="http://purl.org/nbirn/birnlex/ontology/BIRNLex-OBI-proxy.owl#birnlex_11003"/>
<rdfs:Class rdf:about="http://purl.org/nbirn/birnlex/ontology/BIRNLex-OBI-proxy.owl#birnlex_11035"/>
<rdfs:Class rdf:about="http://purl.org/nbirn/birnlex/ontology/BIRNLex-OBI-proxy.owl#birnlex_11010"/>
<rdfs:Class rdf:about="http://purl.org/nbirn/birnlex/ontology/BIRNLex-OBI-proxy.owl#birnlex_11012"/>
<rdfs:Class rdf:about="http://purl.org/nbirn/birnlex/ontology/BIRNLex-OBI-proxy.owl#birnlex_11015"/>
<rdfs:Class rdf:about="http://purl.org/nbirn/birnlex/ontology/BIRNLex-OBI-proxy.owl#birnlex_11009"/>
<rdfs:Class rdf:about="http://purl.org/nbirn/birnlex/ontology/BIRNLex-OBO-UBO.owl#birnlex_15"/>
<rdfs:Class rdf:about="http://purl.org/nbirn/birnlex/ontology/BIRNLex-OBI-proxy.owl#birnlex_11026"/>
<rdfs:Class rdf:about="http://purl.org/nbirn/birnlex/ontology/BIRNLex-OBI-proxy.owl#birnlex_11023"/>
<rdfs:Class rdf:about="http://purl.org/nbirn/birnlex/ontology/BIRNLex-OBI-proxy.owl#birnlex_11033"/>
<rdfs:Class rdf:about="http://purl.org/nbirn/birnlex/ontology/BIRNLex-OBI-proxy.owl#birnlex_11038"/>
<rdfs:Class rdf:about="http://purl.org/nbirn/birnlex/ontology/BIRNLex-OBI-proxy.owl#birnlex_11036"/>
<rdfs:Class rdf:about="http://purl.org/nbirn/birnlex/ontology/BIRNLex-OBI-proxy.owl#birnlex_11004"/>
<rdfs:Class rdf:about="http://purl.org/nbirn/birnlex/ontology/BIRNLex-OBI-proxy.owl#birnlex_11042"/>
<rdfs:Class rdf:about="http://purl.org/nbirn/birnlex/ontology/BIRNLex-Anatomy.owl#birnlex_1122"/>
<rdfs:Class rdf:about="http://purl.org/nbirn/birnlex/ontology/BIRNLex-OBO-UBO.owl#birnlex_21"/>
<rdfs:Class rdf:about="http://purl.org/nbirn/birnlex/ontology/BIRNLex-OBI-proxy.owl#birnlex_11024"/>
<rdfs:Class rdf:about="http://purl.org/nbirn/birnlex/ontology/BIRNLex-OBI-proxy.owl#birnlex_11006"/>
<rdfs:Class rdf:about="http://purl.org/nbirn/birnlex/ontology/BIRNLex-OBO-UBO.owl#birnlex_1"/>
<rdfs:Class rdf:about="http://purl.org/nbirn/birnlex/ontology/BIRNLex-OBI-proxy.owl#birnlex_11008"/>
<rdf:Property rdf:about="http://www.obofoundry.org/ro/ro.owl#contains"/>
<!-- Fix -->
<rdf:Property rdf:about="http://www.obofoundry.org/ro/ro.owl#contained_in"/>
<rdf:Property rdf:about="http://purl.org/obo/owl/OBO_REL#develops_from"/>
<rdf:Property rdf:about="http://www.obofoundry.org/ro/ro.owl#relationship"/>
<!--Fix -->
<rdfs:Class rdf:about="http://ccdb.ucsd.edu/NIF/BIRNLex_annotation_properties.owl#EnumerationClass"/>
<rdfs:Class rdf:about="http://ccdb.ucsd.edu/NIF/BIRNLex_annotation_properties#_birnlex_retired_class"/>
<rdfs:Class rdf:about="http://purl.org/nbirn/birnlex/ontology/annotation/OBO_annotation_properties.owl#EnumerationClass"/>
<owl:ObjectProperty rdf:about="http://www.obofoundry.org/ro/ro.owl#adjacent_to">
<rdfs:range rdf:resource="http://www.ifomis.org/bfo/1.1/snap#Continuant"/>
<rdfs:domain rdf:resource="http://www.ifomis.org/bfo/1.1/snap#Continuant"/>
</owl:ObjectProperty>
<rdf:Property rdf:about="http://purl.org/nbirn/birnlex/ontology/BIRNLex-OBO-UBO.owl#birnlex_17"/>
<owl:TransitiveProperty rdf:about="http://www.obofoundry.org/ro/ro.owl#has_integral_part">
<rdf:type rdf:resource="http://www.w3.org/2002/07/owl#ObjectProperty"/>
<rdfs:domain rdf:resource="http://www.ifomis.org/bfo/1.1/snap#Continuant"/>
<rdfs:range rdf:resource="http://www.ifomis.org/bfo/1.1/snap#Continuant"/>
</owl:TransitiveProperty>
<owl:TransitiveProperty rdf:about="http://www.obofoundry.org/ro/ro.owl#has_part">
<rdf:type rdf:resource="http://www.w3.org/2002/07/owl#ObjectProperty"/>
<rdfs:domain rdf:resource="http://www.ifomis.org/bfo/1.1/snap#Continuant"/>
<rdfs:range rdf:resource="http://www.ifomis.org/bfo/1.1/snap#Continuant"/>
</owl:TransitiveProperty>
<owl:TransitiveProperty rdf:about="http://www.obofoundry.org/ro/ro.owl#part_of">
<rdfs:range rdf:resource="http://www.ifomis.org/bfo/1.1/snap#Continuant"/>
<rdf:type rdf:resource="http://www.w3.org/2002/07/owl#ObjectProperty"/>
<rdfs:domain rdf:resource="http://www.ifomis.org/bfo/1.1/snap#Continuant"/>
</owl:TransitiveProperty>
<owl:TransitiveProperty rdf:about="http://www.obofoundry.org/ro/ro.owl#integral_part_of">
<rdfs:domain rdf:resource="http://www.ifomis.org/bfo/1.1/snap#Continuant"/>
<rdf:type rdf:resource="http://www.w3.org/2002/07/owl#ObjectProperty"/>
<rdfs:range rdf:resource="http://www.ifomis.org/bfo/1.1/snap#Continuant"/>
</owl:TransitiveProperty>
<owl:TransitiveProperty rdf:about="http://www.obofoundry.org/ro/ro.owl#proper_part_of">
<rdfs:range rdf:resource="http://www.ifomis.org/bfo/1.1/snap#Continuant"/>
<rdfs:domain rdf:resource="http://www.ifomis.org/bfo/1.1/snap#Continuant"/>
<rdf:type rdf:resource="http://www.w3.org/2002/07/owl#ObjectProperty"/>
</owl:TransitiveProperty>
<owl:TransitiveProperty rdf:about="http://www.obofoundry.org/ro/ro.owl#has_proper_part">
<rdfs:range rdf:resource="http://www.ifomis.org/bfo/1.1/snap#Continuant"/>
<rdf:type rdf:resource="http://www.w3.org/2002/07/owl#ObjectProperty"/>
<rdfs:domain rdf:resource="http://www.ifomis.org/bfo/1.1/snap#Continuant"/>
</owl:TransitiveProperty>
</rdf:RDF>
<!-- Created with Protege (with OWL Plugin 3.3.1, Build 430) http://protege.stanford.edu -->
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