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* Package: sci-libs/mlpack-3.4.2_p20210802
* Repository: guru
* Maintainer: gentoo@aisha.cc
* USE: R abi_x86_64 amd64 elibc_glibc kernel_linux openmp python_single_target_python3_9 userland_GNU
* FEATURES: fakeroot network-sandbox preserve-libs sandbox splitdebug userpriv usersandbox
* If you want to build matlab bindings then you
* need to make sure that matlab has been installed
* prior to building this package and it is available
* in the standard locations to be found by
* CMake, library finders, header includes and other
* trinkets that are used while compiling.
* Matlab will not be entertained as a first class
* citizen until we have enough personnel
* Using python3.9 to build
>>> Unpacking source...
>>> Unpacking mlpack-3.4.2_p20210802.tar.gz to /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work
>>> Source unpacked in /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work
>>> Preparing source in /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1 ...
* Source directory (CMAKE_USE_DIR): "/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1"
* Build directory (BUILD_DIR): "/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build"
* Applying mlpack-no-pytest-runner.patch ...
[ ok ]
>>> Source prepared.
>>> Configuring source in /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1 ...
* Source directory (CMAKE_USE_DIR): "/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1"
* Build directory (BUILD_DIR): "/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build"
cmake -C /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/gentoo_common_config.cmake -G Ninja -DCMAKE_INSTALL_PREFIX=/usr -DBUILD_CLI_EXECUTABLES=ON -DBUILD_PYTHON_BINDINGS=ON -DBUILD_SHARED_LIBS=ON -DBUILD_WITH_COVERAGE=OFF -DDISABLE_DOWNLOADS=ON -DDOWNLOAD_ENSMALLEN=OFF -DDOWNLOAD_STB_IMAGE=OFF -DARMADILLO_INCLUDE_DIR=/usr/include -DARMADILLO_LIBRARY=/usr/lib64/libarmadillo.so -DCEREAL_INCLUDE_DIR=/usr/include -DENSMALLEN_INCLUDE_DIR=/usr/include -DSTB_IMAGE_INCLUDE_DIR=/usr/include/stb -DARMA_EXTRA_DEBUG=no -DBUILD_DOCS=no -DBUILD_GO_BINDINGS=no -DBUILD_GO_SHLIB=no -DBUILD_JULIA_BINDINGS=no -DBUILD_MARKDOWN_BINDINGS=no -DBUILD_R_BINDINGS=yes -DBUILD_TESTS=no -DDEBUG=no -DMATHJAX=no -DMATLAB_BINDINGS=no -DPROFILE=no -DTEST_VERBOSE=no -DUSE_OPENMP=yes -DCMAKE_BUILD_TYPE=RelWithDebInfo -DCMAKE_TOOLCHAIN_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/gentoo_toolchain.cmake /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1
loading initial cache file /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/gentoo_common_config.cmake
-- The C compiler identification is GNU 11.2.0
-- The CXX compiler identification is GNU 11.2.0
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
-- Check for working C compiler: /usr/bin/x86_64-pc-linux-gnu-gcc - skipped
-- Detecting C compile features
-- Detecting C compile features - done
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
-- Check for working CXX compiler: /usr/bin/x86_64-pc-linux-gnu-g++ - skipped
-- Detecting CXX compile features
-- Detecting CXX compile features - done
-- cotire 1.7.10 loaded.
-- Looking for pthread.h
-- Looking for pthread.h - found
-- Performing Test CMAKE_HAVE_LIBC_PTHREAD
-- Performing Test CMAKE_HAVE_LIBC_PTHREAD - Failed
-- Looking for pthread_create in pthreads
-- Looking for pthread_create in pthreads - not found
-- Looking for pthread_create in pthread
-- Looking for pthread_create in pthread - found
-- Found Threads: TRUE
-- Found Armadillo: /usr/lib64/libarmadillo.so (found suitable version "10.2.0", minimum required is "8.400.0")
-- Found StbImage: /usr/include/stb
-- Found Ensmallen: /usr/include (found suitable version "2.14.2", minimum required is "2.10.0")
-- Found cereal: /usr/include (found suitable version "1.3.0", minimum required is "1.1.2")
-- Found Boost: /usr/include (found suitable version "1.76.0", minimum required is "1.58")
-- Found OpenMP_C: -fopenmp (found version "4.5")
-- Found OpenMP_CXX: -fopenmp (found version "4.5")
-- Found OpenMP: TRUE (found version "4.5")
-- Could NOT find Git (missing: GIT_EXECUTABLE)
-- Regenerating arma_config.hpp.
-- Not building Julia bindings.
-- Not building Markdown bindings.
-- Found PythonInterp: /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/temp/python3.9/bin/python (found version "3.9.7")
-- Found PY_distutils: /usr/lib/python3.9/distutils
-- Found PY_Cython: /usr/lib/python3.9/site-packages/Cython
-- Found PY_numpy: /usr/lib/python3.9/site-packages/numpy
-- Found PY_pandas: /usr/lib/python3.9/site-packages/pandas
-- Not building Go bindings.
-- Found R: /usr/bin/R (found suitable version "4.1.0", minimum required is "4.0")
-- Found R_roxygen2: /usr/lib64/R/site-library/roxygen2
-- Found R_Rcpp: /usr/lib64/R/site-library/Rcpp (found suitable version "1.0.6", minimum required is "0.12.12")
-- Found R_RcppArmadillo: /usr/lib64/R/site-library/RcppArmadillo (found suitable version "0.10.2.2.0", minimum required is "0.8.400.0")
-- Found R_RcppEnsmallen: /usr/lib64/R/site-library/RcppEnsmallen (found suitable version "0.2.15.0.1", minimum required is "0.2.10.0")
-- Found R_BH: /usr/lib64/R/site-library/BH (found suitable version "1.75.0.0", minimum required is "1.58")
-- Found R_testthat: /usr/lib64/R/site-library/testthat
-- Performing Test COMPILER_HAS_HIDDEN_VISIBILITY
-- Performing Test COMPILER_HAS_HIDDEN_VISIBILITY - Success
-- Performing Test COMPILER_HAS_HIDDEN_INLINE_VISIBILITY
-- Performing Test COMPILER_HAS_HIDDEN_INLINE_VISIBILITY - Success
-- Performing Test COMPILER_HAS_DEPRECATED_ATTR
-- Performing Test COMPILER_HAS_DEPRECATED_ATTR - Success
-- CXX target mlpack cotired.
CMake Warning (dev) at /usr/share/cmake/Modules/GNUInstallDirs.cmake:358 (message):
GNUInstallDirs_get_absolute_install_dir called without third argument.
Using ${dir} from the caller's scope for compatibility with CMake 3.19 and
below.
Call Stack (most recent call first):
src/mlpack/CMakeLists.txt:166 (GNUInstallDirs_get_absolute_install_dir)
This warning is for project developers. Use -Wno-dev to suppress it.
CMake Warning (dev) at /usr/share/cmake/Modules/GNUInstallDirs.cmake:358 (message):
GNUInstallDirs_get_absolute_install_dir called without third argument.
Using ${dir} from the caller's scope for compatibility with CMake 3.19 and
below.
Call Stack (most recent call first):
src/mlpack/CMakeLists.txt:167 (GNUInstallDirs_get_absolute_install_dir)
This warning is for project developers. Use -Wno-dev to suppress it.
-- Found PkgConfig: x86_64-pc-linux-gnu-pkg-config (found version "1.8.0")
-- <<< Gentoo configuration >>>
Build type RelWithDebInfo
Install path /usr
Compiler flags:
C -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -Wno-unused-function -std=c99 -fopenmp
C++ -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp
Linker flags:
Executable -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0
Module -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0
Shared -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0
-- Configuring done
-- Generating done
CMake Warning:
Manually-specified variables were not used by the project:
BUILD_WITH_COVERAGE
DOWNLOAD_ENSMALLEN
DOWNLOAD_STB_IMAGE
MATLAB_BINDINGS
-- Build files have been written to: /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build
>>> Source configured.
>>> Compiling source in /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1 ...
* Source directory (CMAKE_USE_DIR): "/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1"
* Build directory (BUILD_DIR): "/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build"
ninja -v -j12 -l12
[1/628] cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1 && /usr/bin/cmake -D ARMADILLO_INCLUDE_DIR="/usr/include" -D OPENMP_FOUND="TRUE" -D CMAKE_SIZEOF_VOID_P="8" -P CMake/CreateArmaConfigInfo.cmake
[2/628] cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R && /usr/bin/cmake -E make_directory /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/mlpack/R/ && /usr/bin/cmake -E make_directory /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/mlpack/tests/testthat && /usr/bin/cmake -E make_directory /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/mlpack/src/mlpack/bindings/R/tests && cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R && /usr/bin/cmake -E copy_if_different /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/R/mlpack/src/r_util.cpp /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/mlpack/src/ && cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R && /usr/bin/cmake -E copy_if_different /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/R/mlpack/src/rcpp_mlpack.h /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/mlpack/src/ && cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R && /usr/bin/cmake -E copy_if_different /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/R/mlpack/src/Makevars /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/mlpack/src/ && cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R && /usr/bin/cmake -E copy_if_different /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/R/mlpack/src/Makevars.win /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/mlpack/src/ && cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R && /usr/bin/cmake -E copy_if_different /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/R/mlpack/R/matrix_utils.R /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/mlpack/R/ && cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R && /usr/bin/cmake -E copy_if_different /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/R/mlpack/R/package.R /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/mlpack/R/ && cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R && /usr/bin/cmake -E copy_if_different /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/R/get_type.hpp /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/mlpack/src/mlpack/bindings/R && cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R && /usr/bin/cmake -E copy_if_different /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/R/print_doc.hpp /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/mlpack/src/mlpack/bindings/R && cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R && /usr/bin/cmake -E copy_if_different /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/R/print_doc_functions.hpp /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/mlpack/src/mlpack/bindings/R && cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R && /usr/bin/cmake -E copy_if_different /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/R/print_doc_functions_impl.hpp /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/mlpack/src/mlpack/bindings/R && cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R && /usr/bin/cmake -E copy_if_different /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/R/print_input_param.hpp /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/mlpack/src/mlpack/bindings/R && cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R && /usr/bin/cmake -E copy_if_different /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/R/get_param.hpp /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/mlpack/src/mlpack/bindings/R && cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R && /usr/bin/cmake -E copy_if_different /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/R/get_printable_param.hpp /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/mlpack/src/mlpack/bindings/R && cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R && /usr/bin/cmake -E copy_if_different /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/R/get_r_type.hpp /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/mlpack/src/mlpack/bindings/R && cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R && /usr/bin/cmake -E copy_if_different /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/R/print_input_processing.hpp /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/mlpack/src/mlpack/bindings/R && cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R && /usr/bin/cmake -E copy_if_different /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/R/print_output_processing.hpp /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/mlpack/src/mlpack/bindings/R && cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R && /usr/bin/cmake -E copy_if_different /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/R/print_serialize_util.hpp /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/mlpack/src/mlpack/bindings/R && cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R && /usr/bin/cmake -E copy_if_different /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/R/mlpack_main.hpp /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/mlpack/src/mlpack/bindings/R && cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R && /usr/bin/cmake -E copy_if_different /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/R/R_option.hpp /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/mlpack/src/mlpack/bindings/R && cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R && /usr/bin/cmake -E copy_if_different /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/R/mlpack/tests/testthat/test-R_binding.R /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/mlpack/tests/testthat && cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R && /usr/bin/cmake -E copy_if_different /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/R/mlpack/tests/testthat.R /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/mlpack/tests && cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R && /usr/bin/cmake -E touch /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/mlpack/model.txt
[3/628] /bin/sh src/mlpack/CMakeFiles/mlpack_headers.dir/utility.sh 48c7829d8f90fdb4
[4/628] cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build && /usr/bin/cmake -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/GeneratePkgConfig.cmake
[5/628] cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build && /usr/bin/cmake -DCOTIRE_BUILD_TYPE:STRING=RelWithDebInfo -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/cotire.cmake combine /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/mlpack_CXX_cotire.cmake /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/cotire/mlpack_CXX_prefix.cxx /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/prereqs.hpp
[6/628] cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build && /usr/bin/cmake -DCOTIRE_BUILD_TYPE:STRING=RelWithDebInfo -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/cotire.cmake combine /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/mlpack_CXX_cotire.cmake /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/cotire/mlpack_CXX_prefix.hxx /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/cotire/mlpack_CXX_prefix.cxx
[7/628] cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack && /usr/bin/cmake -DCOTIRE_BUILD_TYPE:STRING=RelWithDebInfo -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/cotire.cmake precompile /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/mlpack_CXX_cotire.cmake /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/cotire/mlpack_CXX_prefix.hxx /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/cotire/mlpack_CXX_prefix.hxx.gch /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/cli/print_help.cpp
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In file included from /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/core/data/save_image.cpp:25:
/usr/include/stb/stb_image_write.h: In function ‘void stbiw__write1(stbi__write_context*, unsigned char)’:
/usr/include/stb/stb_image_write.h:400:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare]
400 | if (s->buf_used + 1 > sizeof(s->buffer))
| ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
/usr/include/stb/stb_image_write.h: In function ‘void stbiw__write3(stbi__write_context*, unsigned char, unsigned char, unsigned char)’:
/usr/include/stb/stb_image_write.h:408:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare]
408 | if (s->buf_used + 3 > sizeof(s->buffer))
| ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
/usr/include/stb/stb_image_write.h: In function ‘int stbi_write_bmp_to_func(void (*)(void*, void*, int), void*, int, int, int, const void*)’:
/usr/include/stb/stb_image_write.h:502:32: warning: missing initializer for member ‘stbi__write_context::context’ [-Wmissing-field-initializers]
502 | stbi__write_context s = { 0 };
| ^
/usr/include/stb/stb_image_write.h:502:32: warning: missing initializer for member ‘stbi__write_context::buffer’ [-Wmissing-field-initializers]
/usr/include/stb/stb_image_write.h:502:32: warning: missing initializer for member ‘stbi__write_context::buf_used’ [-Wmissing-field-initializers]
/usr/include/stb/stb_image_write.h: In function ‘int stbi_write_bmp(const char*, int, int, int, const void*)’:
/usr/include/stb/stb_image_write.h:510:32: warning: missing initializer for member ‘stbi__write_context::context’ [-Wmissing-field-initializers]
510 | stbi__write_context s = { 0 };
| ^
/usr/include/stb/stb_image_write.h:510:32: warning: missing initializer for member ‘stbi__write_context::buffer’ [-Wmissing-field-initializers]
/usr/include/stb/stb_image_write.h:510:32: warning: missing initializer for member ‘stbi__write_context::buf_used’ [-Wmissing-field-initializers]
/usr/include/stb/stb_image_write.h: In function ‘int stbi_write_tga_to_func(void (*)(void*, void*, int), void*, int, int, int, const void*)’:
/usr/include/stb/stb_image_write.h:601:32: warning: missing initializer for member ‘stbi__write_context::context’ [-Wmissing-field-initializers]
601 | stbi__write_context s = { 0 };
| ^
/usr/include/stb/stb_image_write.h:601:32: warning: missing initializer for member ‘stbi__write_context::buffer’ [-Wmissing-field-initializers]
/usr/include/stb/stb_image_write.h:601:32: warning: missing initializer for member ‘stbi__write_context::buf_used’ [-Wmissing-field-initializers]
/usr/include/stb/stb_image_write.h: In function ‘int stbi_write_tga(const char*, int, int, int, const void*)’:
/usr/include/stb/stb_image_write.h:609:32: warning: missing initializer for member ‘stbi__write_context::context’ [-Wmissing-field-initializers]
609 | stbi__write_context s = { 0 };
| ^
/usr/include/stb/stb_image_write.h:609:32: warning: missing initializer for member ‘stbi__write_context::buffer’ [-Wmissing-field-initializers]
/usr/include/stb/stb_image_write.h:609:32: warning: missing initializer for member ‘stbi__write_context::buf_used’ [-Wmissing-field-initializers]
/usr/include/stb/stb_image_write.h: In function ‘int stbi_write_hdr_to_func(void (*)(void*, void*, int), void*, int, int, int, const float*)’:
/usr/include/stb/stb_image_write.h:775:32: warning: missing initializer for member ‘stbi__write_context::context’ [-Wmissing-field-initializers]
775 | stbi__write_context s = { 0 };
| ^
/usr/include/stb/stb_image_write.h:775:32: warning: missing initializer for member ‘stbi__write_context::buffer’ [-Wmissing-field-initializers]
/usr/include/stb/stb_image_write.h:775:32: warning: missing initializer for member ‘stbi__write_context::buf_used’ [-Wmissing-field-initializers]
/usr/include/stb/stb_image_write.h: In function ‘int stbi_write_hdr(const char*, int, int, int, const float*)’:
/usr/include/stb/stb_image_write.h:783:32: warning: missing initializer for member ‘stbi__write_context::context’ [-Wmissing-field-initializers]
783 | stbi__write_context s = { 0 };
| ^
/usr/include/stb/stb_image_write.h:783:32: warning: missing initializer for member ‘stbi__write_context::buffer’ [-Wmissing-field-initializers]
/usr/include/stb/stb_image_write.h:783:32: warning: missing initializer for member ‘stbi__write_context::buf_used’ [-Wmissing-field-initializers]
/usr/include/stb/stb_image_write.h: In function ‘int stbi_write_jpg_to_func(void (*)(void*, void*, int), void*, int, int, int, const void*, int)’:
/usr/include/stb/stb_image_write.h:1579:32: warning: missing initializer for member ‘stbi__write_context::context’ [-Wmissing-field-initializers]
1579 | stbi__write_context s = { 0 };
| ^
/usr/include/stb/stb_image_write.h:1579:32: warning: missing initializer for member ‘stbi__write_context::buffer’ [-Wmissing-field-initializers]
/usr/include/stb/stb_image_write.h:1579:32: warning: missing initializer for member ‘stbi__write_context::buf_used’ [-Wmissing-field-initializers]
/usr/include/stb/stb_image_write.h: In function ‘int stbi_write_jpg(const char*, int, int, int, const void*, int)’:
/usr/include/stb/stb_image_write.h:1588:32: warning: missing initializer for member ‘stbi__write_context::context’ [-Wmissing-field-initializers]
1588 | stbi__write_context s = { 0 };
| ^
/usr/include/stb/stb_image_write.h:1588:32: warning: missing initializer for member ‘stbi__write_context::buffer’ [-Wmissing-field-initializers]
/usr/include/stb/stb_image_write.h:1588:32: warning: missing initializer for member ‘stbi__write_context::buf_used’ [-Wmissing-field-initializers]
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In file included from /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/core/data/load_image.cpp:22:
/usr/include/stb/stb_image.h: In function ‘int stbi__zhuffman_decode_slowpath(stbi__zbuf*, stbi__zhuffman*)’:
/usr/include/stb/stb_image.h:4123:10: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare]
4123 | if (b >= sizeof (z->size)) return -1; // some data was corrupt somewhere!
| ~~^~~~~~~~~~~~~~~~~~~
/usr/include/stb/stb_image.h: In function ‘void* stbi__load_gif_main(stbi__context*, int**, int*, int*, int*, int*, int)’:
/usr/include/stb/stb_image.h:6778:11: warning: variable ‘out_size’ set but not used [-Wunused-but-set-variable]
6778 | int out_size = 0;
| ^~~~~~~~
/usr/include/stb/stb_image.h:6779:11: warning: variable ‘delays_size’ set but not used [-Wunused-but-set-variable]
6779 | int delays_size = 0;
| ^~~~~~~~~~~
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[71/628] /usr/bin/x86_64-pc-linux-gnu-g++ -DARMA_NO_DEBUG -DHAS_OPENMP -DHAS_STB -DNDEBUG -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include/stb -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -DBINDING_TYPE=BINDING_TYPE_CLI -std=gnu++11 -MD -MT src/mlpack/methods/gmm/CMakeFiles/mlpack_gmm_probability.dir/gmm_probability_main.cpp.o -MF src/mlpack/methods/gmm/CMakeFiles/mlpack_gmm_probability.dir/gmm_probability_main.cpp.o.d -o src/mlpack/methods/gmm/CMakeFiles/mlpack_gmm_probability.dir/gmm_probability_main.cpp.o -c /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/methods/gmm/gmm_probability_main.cpp
[72/628] /usr/bin/x86_64-pc-linux-gnu-g++ -DARMA_NO_DEBUG -DHAS_OPENMP -DHAS_STB -DNDEBUG -Dmlpack_EXPORTS -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include/stb -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -fPIC -Winvalid-pch -include /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/cotire/mlpack_CXX_prefix.hxx -std=gnu++11 -MD -MT src/mlpack/CMakeFiles/mlpack.dir/methods/cf/cf_model.cpp.o -MF src/mlpack/CMakeFiles/mlpack.dir/methods/cf/cf_model.cpp.o.d -o src/mlpack/CMakeFiles/mlpack.dir/methods/cf/cf_model.cpp.o -c /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/methods/cf/cf_model.cpp
[73/628] : && /usr/bin/x86_64-pc-linux-gnu-g++ -fPIC -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 -shared -Wl,-soname,libmlpack.so.3 -o lib/libmlpack.so.3.4 src/mlpack/CMakeFiles/mlpack.dir/bindings/cli/print_help.cpp.o src/mlpack/CMakeFiles/mlpack.dir/bindings/tests/clean_memory.cpp.o src/mlpack/CMakeFiles/mlpack.dir/bindings/tests/test_function_map.cpp.o src/mlpack/CMakeFiles/mlpack.dir/core/data/detect_file_type.cpp.o src/mlpack/CMakeFiles/mlpack.dir/core/data/load_csv.cpp.o src/mlpack/CMakeFiles/mlpack.dir/core/data/load_image.cpp.o src/mlpack/CMakeFiles/mlpack.dir/core/data/load.cpp.o src/mlpack/CMakeFiles/mlpack.dir/core/data/save_image.cpp.o src/mlpack/CMakeFiles/mlpack.dir/core/dists/discrete_distribution.cpp.o src/mlpack/CMakeFiles/mlpack.dir/core/dists/gaussian_distribution.cpp.o src/mlpack/CMakeFiles/mlpack.dir/core/dists/laplace_distribution.cpp.o src/mlpack/CMakeFiles/mlpack.dir/core/dists/regression_distribution.cpp.o src/mlpack/CMakeFiles/mlpack.dir/core/dists/gamma_distribution.cpp.o src/mlpack/CMakeFiles/mlpack.dir/core/dists/diagonal_gaussian_distribution.cpp.o src/mlpack/CMakeFiles/mlpack.dir/core/kernels/epanechnikov_kernel.cpp.o src/mlpack/CMakeFiles/mlpack.dir/core/kernels/pspectrum_string_kernel.cpp.o src/mlpack/CMakeFiles/mlpack.dir/core/math/columns_to_blocks.cpp.o src/mlpack/CMakeFiles/mlpack.dir/core/math/lin_alg.cpp.o src/mlpack/CMakeFiles/mlpack.dir/core/math/random.cpp.o src/mlpack/CMakeFiles/mlpack.dir/core/math/random_basis.cpp.o src/mlpack/CMakeFiles/mlpack.dir/core/tree/cosine_tree/cosine_tree.cpp.o src/mlpack/CMakeFiles/mlpack.dir/core/util/backtrace.cpp.o src/mlpack/CMakeFiles/mlpack.dir/core/util/io.cpp.o src/mlpack/CMakeFiles/mlpack.dir/core/util/log.cpp.o src/mlpack/CMakeFiles/mlpack.dir/core/util/params.cpp.o src/mlpack/CMakeFiles/mlpack.dir/core/util/prefixedoutstream.cpp.o src/mlpack/CMakeFiles/mlpack.dir/core/util/program_doc.cpp.o src/mlpack/CMakeFiles/mlpack.dir/core/util/singletons.cpp.o src/mlpack/CMakeFiles/mlpack.dir/core/util/timers.cpp.o src/mlpack/CMakeFiles/mlpack.dir/core/util/version.cpp.o src/mlpack/CMakeFiles/mlpack.dir/methods/adaboost/adaboost_model.cpp.o src/mlpack/CMakeFiles/mlpack.dir/methods/bayesian_linear_regression/bayesian_linear_regression.cpp.o src/mlpack/CMakeFiles/mlpack.dir/methods/block_krylov_svd/randomized_block_krylov_svd.cpp.o src/mlpack/CMakeFiles/mlpack.dir/methods/cf/cf_model.cpp.o src/mlpack/CMakeFiles/mlpack.dir/methods/fastmks/fastmks_model.cpp.o src/mlpack/CMakeFiles/mlpack.dir/methods/gmm/gmm.cpp.o src/mlpack/CMakeFiles/mlpack.dir/methods/gmm/diagonal_gmm.cpp.o src/mlpack/CMakeFiles/mlpack.dir/methods/hoeffding_trees/hoeffding_tree_model.cpp.o src/mlpack/CMakeFiles/mlpack.dir/methods/kde/kde_model.cpp.o src/mlpack/CMakeFiles/mlpack.dir/methods/lars/lars.cpp.o src/mlpack/CMakeFiles/mlpack.dir/methods/linear_regression/linear_regression.cpp.o src/mlpack/CMakeFiles/mlpack.dir/methods/local_coordinate_coding/lcc.cpp.o src/mlpack/CMakeFiles/mlpack.dir/methods/matrix_completion/matrix_completion.cpp.o src/mlpack/CMakeFiles/mlpack.dir/methods/neighbor_search/unmap.cpp.o src/mlpack/CMakeFiles/mlpack.dir/methods/quic_svd/quic_svd.cpp.o src/mlpack/CMakeFiles/mlpack.dir/methods/radical/radical.cpp.o src/mlpack/CMakeFiles/mlpack.dir/methods/randomized_svd/randomized_svd.cpp.o src/mlpack/CMakeFiles/mlpack.dir/methods/range_search/rs_model.cpp.o src/mlpack/CMakeFiles/mlpack.dir/methods/rann/ra_util.cpp.o src/mlpack/CMakeFiles/mlpack.dir/methods/rann/ra_model.cpp.o src/mlpack/CMakeFiles/mlpack.dir/methods/reinforcement_learning/environment/env_type.cpp.o src/mlpack/CMakeFiles/mlpack.dir/methods/softmax_regression/softmax_regression.cpp.o src/mlpack/CMakeFiles/mlpack.dir/methods/softmax_regression/softmax_regression_function.cpp.o src/mlpack/CMakeFiles/mlpack.dir/methods/sparse_autoencoder/sparse_autoencoder.cpp.o src/mlpack/CMakeFiles/mlpack.dir/methods/sparse_autoencoder/sparse_autoencoder_function.cpp.o src/mlpack/CMakeFiles/mlpack.dir/methods/sparse_autoencoder/maximal_inputs.cpp.o src/mlpack/CMakeFiles/mlpack.dir/methods/sparse_coding/sparse_coding.cpp.o /usr/lib64/libarmadillo.so /usr/lib/gcc/x86_64-pc-linux-gnu/11.2.0/libgomp.so /usr/lib64/libpthread.so && :
[74/628] /usr/bin/cmake -E cmake_symlink_library lib/libmlpack.so.3.4 lib/libmlpack.so.3 lib/libmlpack.so && :
[75/628] cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python && /usr/bin/cmake -E make_directory /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/mlpack/ && cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python && /usr/bin/cmake -E copy /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/python/mlpack/arma_numpy.pxd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/mlpack/ && cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python && /usr/bin/cmake -E copy /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/python/mlpack/arma_numpy.pyx /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/mlpack/ && cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python && /usr/bin/cmake -E copy /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/python/mlpack/arma.pxd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/mlpack/ && cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python && /usr/bin/cmake -E copy /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/python/mlpack/arma_util.hpp /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/mlpack/ && cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python && /usr/bin/cmake -E copy /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/python/mlpack/io.pxd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/mlpack/ && cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python && /usr/bin/cmake -E copy /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/python/mlpack/io_util.hpp /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/mlpack/ && cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python && /usr/bin/cmake -E copy /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/python/mlpack/matrix_utils.py /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/mlpack/ && cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python && /usr/bin/cmake -E copy /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/python/mlpack/serialization.hpp /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/mlpack/ && cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python && /usr/bin/cmake -E copy /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/python/mlpack/serialization.pxd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/mlpack/ && cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python && /usr/bin/cmake -E copy /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/python/mlpack/params.pxd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/mlpack/ && cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python && /usr/bin/cmake -E copy /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/python/mlpack/preprocess_json_params.py /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/mlpack/ && cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python && /usr/bin/cmake -E copy /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/python/mlpack/timers.pxd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/mlpack/ && cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python && /usr/bin/cmake -E copy /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/python/setup.cfg /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/ && cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python && /usr/bin/cmake -E copy /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/python/copy_artifacts.py /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/
[76/628] cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack && /usr/bin/cmake -D GENERATE_CPP_IN=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/python/setup.py.in -D GENERATE_CPP_OUT=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/setup.py -D PACKAGE_VERSION="3.4.3" -D ARMADILLO_LIBRARIES="/usr/lib64/libarmadillo.so" -D MLPACK_LIBRARY=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib/libmlpack.so -D MLPACK_LIBDIR=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib -D MLPACK_PYXS="arma_numpy.pyx adaboost.pyx approx_kfn.pyx bayesian_linear_regression.pyx cf.pyx dbscan.pyx decision_tree.pyx det.pyx emst.pyx fastmks.pyx gmm_train.pyx gmm_generate.pyx gmm_probability.pyx hmm_train.pyx hmm_loglik.pyx hmm_viterbi.pyx hmm_generate.pyx hoeffding_tree.pyx kde.pyx kernel_pca.pyx kmeans.pyx lars.pyx linear_regression.pyx linear_svm.pyx lmnn.pyx local_coordinate_coding.pyx logistic_regression.pyx lsh.pyx mean_shift.pyx nbc.pyx nca.pyx knn.pyx kfn.pyx nmf.pyx pca.pyx perceptron.pyx preprocess_split.pyx preprocess_binarize.pyx preprocess_describe.pyx preprocess_scale.pyx preprocess_one_hot_encoding.pyx image_converter.pyx radical.pyx random_forest.pyx krann.pyx softmax_regression.pyx sparse_coding.pyx" -D OpenMP_CXX_FLAGS="-fopenmp" -D DISABLE_CFLAGS="" -D CYTHON_INCLUDE_DIRECTORIES="/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src /usr/include /usr/include /usr/include /usr/include/stb /usr/include /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.." -D CMAKE_CXX_FLAGS=-Os\ -pipe\ -march=native\ -frecord-gcc-switches\ -Wall\ -Wextra\ -ftemplate-depth=1000\ -Wno-unused-function\ \ -fopenmp -D OUTPUT_DIR=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/ConfigureFile.cmake
[77/628] /usr/bin/x86_64-pc-linux-gnu-g++ -DARMA_NO_DEBUG -DHAS_OPENMP -DHAS_STB -DNDEBUG -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include/stb -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -DBINDING_TYPE=BINDING_TYPE_CLI -std=gnu++11 -MD -MT src/mlpack/methods/gmm/CMakeFiles/mlpack_gmm_generate.dir/gmm_generate_main.cpp.o -MF src/mlpack/methods/gmm/CMakeFiles/mlpack_gmm_generate.dir/gmm_generate_main.cpp.o.d -o src/mlpack/methods/gmm/CMakeFiles/mlpack_gmm_generate.dir/gmm_generate_main.cpp.o -c /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/methods/gmm/gmm_generate_main.cpp
[78/628] : && /usr/bin/x86_64-pc-linux-gnu-g++ -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 src/mlpack/methods/adaboost/CMakeFiles/mlpack_adaboost.dir/adaboost_main.cpp.o -o bin/mlpack_adaboost -Wl,-rpath,/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib: lib/libmlpack.so.3.4 /usr/lib64/libarmadillo.so -lpthread /usr/lib/gcc/x86_64-pc-linux-gnu/11.2.0/libgomp.so /usr/lib64/libpthread.so && :
[79/628] cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/methods/adaboost && /usr/bin/cmake -DMODEL_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/mlpack/model.txt -DPROGRAM_NAME=adaboost -DPROGRAM_MAIN_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/methods/adaboost/adaboost_main.cpp -DSOURCE_DIR=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1 -DR_CPP_IN=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/R/r_method.cpp.in -DR_CPP_OUT=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/mlpack/src/adaboost.cpp -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/R/ConfigureRCPP.cmake
[80/628] cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/methods/adaboost && /usr/bin/cmake -DNAME=adaboost -DGENERATE_CPP_IN=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/R/generate_R.cpp.in -DGENERATE_CPP_OUT=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/build/generate_r_adaboost.cpp -DPROGRAM_MAIN_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/methods/adaboost/adaboost_main.cpp -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/ConfigureFile.cmake
[81/628] /usr/bin/x86_64-pc-linux-gnu-g++ -DARMA_NO_DEBUG -DHAS_OPENMP -DHAS_STB -DNDEBUG -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include/stb -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -DBINDING_TYPE=BINDING_TYPE_CLI -std=gnu++11 -MD -MT src/mlpack/methods/range_search/CMakeFiles/mlpack_range_search.dir/range_search_main.cpp.o -MF src/mlpack/methods/range_search/CMakeFiles/mlpack_range_search.dir/range_search_main.cpp.o.d -o src/mlpack/methods/range_search/CMakeFiles/mlpack_range_search.dir/range_search_main.cpp.o -c /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/methods/range_search/range_search_main.cpp
[82/628] /usr/bin/x86_64-pc-linux-gnu-g++ -DARMA_NO_DEBUG -DHAS_OPENMP -DHAS_STB -DNDEBUG -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include/stb -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -DBINDING_TYPE=BINDING_TYPE_CLI -std=gnu++11 -MD -MT src/mlpack/methods/gmm/CMakeFiles/mlpack_gmm_train.dir/gmm_train_main.cpp.o -MF src/mlpack/methods/gmm/CMakeFiles/mlpack_gmm_train.dir/gmm_train_main.cpp.o.d -o src/mlpack/methods/gmm/CMakeFiles/mlpack_gmm_train.dir/gmm_train_main.cpp.o -c /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/methods/gmm/gmm_train_main.cpp
[83/628] /usr/bin/x86_64-pc-linux-gnu-g++ -DARMA_NO_DEBUG -DHAS_OPENMP -DHAS_STB -DNDEBUG -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include/stb -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -DBINDING_TYPE=BINDING_TYPE_CLI -std=gnu++11 -MD -MT src/mlpack/methods/hmm/CMakeFiles/mlpack_hmm_loglik.dir/hmm_loglik_main.cpp.o -MF src/mlpack/methods/hmm/CMakeFiles/mlpack_hmm_loglik.dir/hmm_loglik_main.cpp.o.d -o src/mlpack/methods/hmm/CMakeFiles/mlpack_hmm_loglik.dir/hmm_loglik_main.cpp.o -c /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/methods/hmm/hmm_loglik_main.cpp
[84/628] cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/methods/approx_kfn && /usr/bin/cmake -DMODEL_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/mlpack/model.txt -DPROGRAM_NAME=approx_kfn -DPROGRAM_MAIN_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/methods/approx_kfn/approx_kfn_main.cpp -DSOURCE_DIR=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1 -DR_CPP_IN=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/R/r_method.cpp.in -DR_CPP_OUT=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/mlpack/src/approx_kfn.cpp -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/R/ConfigureRCPP.cmake
[85/628] cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/methods/approx_kfn && /usr/bin/cmake -DNAME=approx_kfn -DGENERATE_CPP_IN=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/R/generate_R.cpp.in -DGENERATE_CPP_OUT=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/build/generate_r_approx_kfn.cpp -DPROGRAM_MAIN_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/methods/approx_kfn/approx_kfn_main.cpp -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/ConfigureFile.cmake
[86/628] /usr/bin/x86_64-pc-linux-gnu-g++ -DARMA_NO_DEBUG -DHAS_OPENMP -DHAS_STB -DNDEBUG -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include/stb -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -DBINDING_TYPE=BINDING_TYPE_CLI -std=gnu++11 -MD -MT src/mlpack/methods/hmm/CMakeFiles/mlpack_hmm_viterbi.dir/hmm_viterbi_main.cpp.o -MF src/mlpack/methods/hmm/CMakeFiles/mlpack_hmm_viterbi.dir/hmm_viterbi_main.cpp.o.d -o src/mlpack/methods/hmm/CMakeFiles/mlpack_hmm_viterbi.dir/hmm_viterbi_main.cpp.o -c /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/methods/hmm/hmm_viterbi_main.cpp
[87/628] /usr/bin/x86_64-pc-linux-gnu-g++ -DARMA_NO_DEBUG -DHAS_OPENMP -DHAS_STB -DNDEBUG -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include/stb -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -DBINDING_TYPE=BINDING_TYPE_CLI -std=gnu++11 -MD -MT src/mlpack/methods/hmm/CMakeFiles/mlpack_hmm_generate.dir/hmm_generate_main.cpp.o -MF src/mlpack/methods/hmm/CMakeFiles/mlpack_hmm_generate.dir/hmm_generate_main.cpp.o.d -o src/mlpack/methods/hmm/CMakeFiles/mlpack_hmm_generate.dir/hmm_generate_main.cpp.o -c /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/methods/hmm/hmm_generate_main.cpp
[88/628] : && /usr/bin/x86_64-pc-linux-gnu-g++ -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 src/mlpack/methods/approx_kfn/CMakeFiles/mlpack_approx_kfn.dir/approx_kfn_main.cpp.o -o bin/mlpack_approx_kfn -Wl,-rpath,/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib: lib/libmlpack.so.3.4 /usr/lib64/libarmadillo.so -lpthread /usr/lib/gcc/x86_64-pc-linux-gnu/11.2.0/libgomp.so /usr/lib64/libpthread.so && :
[89/628] cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/methods/bayesian_linear_regression && /usr/bin/cmake -DMODEL_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/mlpack/model.txt -DPROGRAM_NAME=bayesian_linear_regression -DPROGRAM_MAIN_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/methods/bayesian_linear_regression/bayesian_linear_regression_main.cpp -DSOURCE_DIR=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1 -DR_CPP_IN=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/R/r_method.cpp.in -DR_CPP_OUT=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/mlpack/src/bayesian_linear_regression.cpp -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/R/ConfigureRCPP.cmake
[90/628] cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/methods/bayesian_linear_regression && /usr/bin/cmake -DNAME=bayesian_linear_regression -DGENERATE_CPP_IN=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/R/generate_R.cpp.in -DGENERATE_CPP_OUT=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/build/generate_r_bayesian_linear_regression.cpp -DPROGRAM_MAIN_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/methods/bayesian_linear_regression/bayesian_linear_regression_main.cpp -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/ConfigureFile.cmake
[91/628] : && /usr/bin/x86_64-pc-linux-gnu-g++ -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 src/mlpack/methods/bayesian_linear_regression/CMakeFiles/mlpack_bayesian_linear_regression.dir/bayesian_linear_regression_main.cpp.o -o bin/mlpack_bayesian_linear_regression -Wl,-rpath,/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib: lib/libmlpack.so.3.4 /usr/lib64/libarmadillo.so -lpthread /usr/lib/gcc/x86_64-pc-linux-gnu/11.2.0/libgomp.so /usr/lib64/libpthread.so && :
[92/628] cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python && /usr/bin/cmake -E env NO_BUILD=1 /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/temp/python3.9/bin/python /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/setup.py build
running build
running build_py
creating build
creating build/lib
creating build/lib/mlpack
copying ./mlpack/__init__.py -> build/lib/mlpack
copying ./mlpack/matrix_utils.py -> build/lib/mlpack
copying ./mlpack/preprocess_json_params.py -> build/lib/mlpack
warning: build_py: byte-compiling is disabled, skipping.
[93/628] cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/methods/det && /usr/bin/cmake -DGENERATE_CPP_IN=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/python/generate_pyx.cpp.in -DGENERATE_CPP_OUT=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/generate_pyx_det.cpp -DPROGRAM_MAIN_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/methods/det/det_main.cpp -DPROGRAM_NAME=det -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/ConfigureFile.cmake
[94/628] cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/methods/adaboost && /usr/bin/cmake -DGENERATE_CPP_IN=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/python/generate_pyx.cpp.in -DGENERATE_CPP_OUT=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/generate_pyx_adaboost.cpp -DPROGRAM_MAIN_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/methods/adaboost/adaboost_main.cpp -DPROGRAM_NAME=adaboost -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/ConfigureFile.cmake
[95/628] /usr/bin/x86_64-pc-linux-gnu-g++ -DARMA_NO_DEBUG -DHAS_OPENMP -DHAS_STB -DNDEBUG -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include/stb -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -DBINDING_TYPE=BINDING_TYPE_CLI -std=gnu++11 -MD -MT src/mlpack/methods/fastmks/CMakeFiles/mlpack_fastmks.dir/fastmks_main.cpp.o -MF src/mlpack/methods/fastmks/CMakeFiles/mlpack_fastmks.dir/fastmks_main.cpp.o.d -o src/mlpack/methods/fastmks/CMakeFiles/mlpack_fastmks.dir/fastmks_main.cpp.o -c /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/methods/fastmks/fastmks_main.cpp
[96/628] /usr/bin/x86_64-pc-linux-gnu-g++ -DARMA_NO_DEBUG -DHAS_OPENMP -DHAS_STB -DNDEBUG -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include/stb -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -DBINDING_TYPE=BINDING_TYPE_CLI -std=gnu++11 -MD -MT src/mlpack/methods/hmm/CMakeFiles/mlpack_hmm_train.dir/hmm_train_main.cpp.o -MF src/mlpack/methods/hmm/CMakeFiles/mlpack_hmm_train.dir/hmm_train_main.cpp.o.d -o src/mlpack/methods/hmm/CMakeFiles/mlpack_hmm_train.dir/hmm_train_main.cpp.o -c /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/methods/hmm/hmm_train_main.cpp
[97/628] cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/methods/approx_kfn && /usr/bin/cmake -DGENERATE_CPP_IN=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/python/generate_pyx.cpp.in -DGENERATE_CPP_OUT=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/generate_pyx_approx_kfn.cpp -DPROGRAM_MAIN_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/methods/approx_kfn/approx_kfn_main.cpp -DPROGRAM_NAME=approx_kfn -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/ConfigureFile.cmake
[98/628] /usr/bin/x86_64-pc-linux-gnu-g++ -DARMA_NO_DEBUG -DHAS_OPENMP -DHAS_STB -DNDEBUG -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include/stb -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -DBINDING_TYPE=BINDING_TYPE_CLI -std=gnu++11 -MD -MT src/mlpack/methods/hoeffding_trees/CMakeFiles/mlpack_hoeffding_tree.dir/hoeffding_tree_main.cpp.o -MF src/mlpack/methods/hoeffding_trees/CMakeFiles/mlpack_hoeffding_tree.dir/hoeffding_tree_main.cpp.o.d -o src/mlpack/methods/hoeffding_trees/CMakeFiles/mlpack_hoeffding_tree.dir/hoeffding_tree_main.cpp.o -c /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/methods/hoeffding_trees/hoeffding_tree_main.cpp
[99/628] /usr/bin/x86_64-pc-linux-gnu-g++ -DARMA_NO_DEBUG -DHAS_OPENMP -DHAS_STB -DNDEBUG -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include/stb -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -DBINDING_TYPE=BINDING_TYPE_R -std=gnu++11 -MD -MT src/mlpack/methods/adaboost/CMakeFiles/generate_r_adaboost.dir/__/__/bindings/R/print_R.cpp.o -MF src/mlpack/methods/adaboost/CMakeFiles/generate_r_adaboost.dir/__/__/bindings/R/print_R.cpp.o.d -o src/mlpack/methods/adaboost/CMakeFiles/generate_r_adaboost.dir/__/__/bindings/R/print_R.cpp.o -c /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/R/print_R.cpp
[100/628] cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/methods/bayesian_linear_regression && /usr/bin/cmake -DGENERATE_CPP_IN=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/python/generate_pyx.cpp.in -DGENERATE_CPP_OUT=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/generate_pyx_bayesian_linear_regression.cpp -DPROGRAM_MAIN_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/methods/bayesian_linear_regression/bayesian_linear_regression_main.cpp -DPROGRAM_NAME=bayesian_linear_regression -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/ConfigureFile.cmake
[101/628] /usr/bin/x86_64-pc-linux-gnu-g++ -DARMA_NO_DEBUG -DHAS_OPENMP -DHAS_STB -DNDEBUG -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include/stb -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -DBINDING_TYPE=BINDING_TYPE_R -std=gnu++11 -MD -MT src/mlpack/methods/bayesian_linear_regression/CMakeFiles/generate_r_bayesian_linear_regression.dir/__/__/bindings/R/print_R.cpp.o -MF src/mlpack/methods/bayesian_linear_regression/CMakeFiles/generate_r_bayesian_linear_regression.dir/__/__/bindings/R/print_R.cpp.o.d -o src/mlpack/methods/bayesian_linear_regression/CMakeFiles/generate_r_bayesian_linear_regression.dir/__/__/bindings/R/print_R.cpp.o -c /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/R/print_R.cpp
[102/628] /usr/bin/x86_64-pc-linux-gnu-g++ -DARMA_NO_DEBUG -DHAS_OPENMP -DHAS_STB -DNDEBUG -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include/stb -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -DBINDING_TYPE=BINDING_TYPE_R -std=gnu++11 -MD -MT src/mlpack/methods/approx_kfn/CMakeFiles/generate_r_approx_kfn.dir/__/__/bindings/R/print_R.cpp.o -MF src/mlpack/methods/approx_kfn/CMakeFiles/generate_r_approx_kfn.dir/__/__/bindings/R/print_R.cpp.o.d -o src/mlpack/methods/approx_kfn/CMakeFiles/generate_r_approx_kfn.dir/__/__/bindings/R/print_R.cpp.o -c /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/R/print_R.cpp
[103/628] /usr/bin/x86_64-pc-linux-gnu-g++ -DARMA_NO_DEBUG -DHAS_OPENMP -DHAS_STB -DNDEBUG -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include/stb -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -DBINDING_TYPE=BINDING_TYPE_PYX -std=gnu++11 -MD -MT src/mlpack/methods/adaboost/CMakeFiles/generate_pyx_adaboost.dir/__/__/bindings/python/print_pyx.cpp.o -MF src/mlpack/methods/adaboost/CMakeFiles/generate_pyx_adaboost.dir/__/__/bindings/python/print_pyx.cpp.o.d -o src/mlpack/methods/adaboost/CMakeFiles/generate_pyx_adaboost.dir/__/__/bindings/python/print_pyx.cpp.o -c /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/python/print_pyx.cpp
[104/628] cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/methods/cf && /usr/bin/cmake -DGENERATE_CPP_IN=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/python/generate_pyx.cpp.in -DGENERATE_CPP_OUT=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/generate_pyx_cf.cpp -DPROGRAM_MAIN_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/methods/cf/cf_main.cpp -DPROGRAM_NAME=cf -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/ConfigureFile.cmake
[105/628] /usr/bin/x86_64-pc-linux-gnu-g++ -DARMA_NO_DEBUG -DHAS_OPENMP -DHAS_STB -DNDEBUG -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include/stb -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -DBINDING_TYPE=BINDING_TYPE_PYX -std=gnu++11 -MD -MT src/mlpack/methods/approx_kfn/CMakeFiles/generate_pyx_approx_kfn.dir/__/__/bindings/python/print_pyx.cpp.o -MF src/mlpack/methods/approx_kfn/CMakeFiles/generate_pyx_approx_kfn.dir/__/__/bindings/python/print_pyx.cpp.o.d -o src/mlpack/methods/approx_kfn/CMakeFiles/generate_pyx_approx_kfn.dir/__/__/bindings/python/print_pyx.cpp.o -c /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/python/print_pyx.cpp
[106/628] cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/methods/cf && /usr/bin/cmake -DMODEL_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/mlpack/model.txt -DPROGRAM_NAME=cf -DPROGRAM_MAIN_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/methods/cf/cf_main.cpp -DSOURCE_DIR=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1 -DR_CPP_IN=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/R/r_method.cpp.in -DR_CPP_OUT=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/mlpack/src/cf.cpp -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/R/ConfigureRCPP.cmake
[107/628] cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/methods/cf && /usr/bin/cmake -DNAME=cf -DGENERATE_CPP_IN=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/R/generate_R.cpp.in -DGENERATE_CPP_OUT=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/build/generate_r_cf.cpp -DPROGRAM_MAIN_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/methods/cf/cf_main.cpp -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/ConfigureFile.cmake
[108/628] /usr/bin/x86_64-pc-linux-gnu-g++ -DARMA_NO_DEBUG -DHAS_OPENMP -DHAS_STB -DNDEBUG -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include/stb -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -DBINDING_TYPE=BINDING_TYPE_R -std=gnu++11 -MD -MT src/mlpack/methods/bayesian_linear_regression/CMakeFiles/generate_r_bayesian_linear_regression.dir/__/__/bindings/R/build/generate_r_bayesian_linear_regression.cpp.o -MF src/mlpack/methods/bayesian_linear_regression/CMakeFiles/generate_r_bayesian_linear_regression.dir/__/__/bindings/R/build/generate_r_bayesian_linear_regression.cpp.o.d -o src/mlpack/methods/bayesian_linear_regression/CMakeFiles/generate_r_bayesian_linear_regression.dir/__/__/bindings/R/build/generate_r_bayesian_linear_regression.cpp.o -c /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/build/generate_r_bayesian_linear_regression.cpp
[109/628] : && /usr/bin/x86_64-pc-linux-gnu-g++ -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 src/mlpack/methods/bayesian_linear_regression/CMakeFiles/generate_r_bayesian_linear_regression.dir/__/__/bindings/R/build/generate_r_bayesian_linear_regression.cpp.o src/mlpack/methods/bayesian_linear_regression/CMakeFiles/generate_r_bayesian_linear_regression.dir/__/__/bindings/R/print_R.cpp.o -o src/mlpack/bindings/R/build/bin/generate_r_bayesian_linear_regression -Wl,-rpath,/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib lib/libmlpack.so.3.4 /usr/lib64/libarmadillo.so /usr/lib/gcc/x86_64-pc-linux-gnu/11.2.0/libgomp.so /usr/lib64/libpthread.so && cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/methods/bayesian_linear_regression && /usr/bin/cmake -DGENERATE_BINDING_PROGRAM=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/build/bin/generate_r_bayesian_linear_regression -DBINDING_OUTPUT_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/mlpack/R/bayesian_linear_regression.R -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/GenerateBinding.cmake
[110/628] /usr/bin/x86_64-pc-linux-gnu-g++ -DARMA_NO_DEBUG -DHAS_OPENMP -DHAS_STB -DNDEBUG -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include/stb -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -DBINDING_TYPE=BINDING_TYPE_R -std=gnu++11 -MD -MT src/mlpack/methods/adaboost/CMakeFiles/generate_r_adaboost.dir/__/__/bindings/R/build/generate_r_adaboost.cpp.o -MF src/mlpack/methods/adaboost/CMakeFiles/generate_r_adaboost.dir/__/__/bindings/R/build/generate_r_adaboost.cpp.o.d -o src/mlpack/methods/adaboost/CMakeFiles/generate_r_adaboost.dir/__/__/bindings/R/build/generate_r_adaboost.cpp.o -c /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/build/generate_r_adaboost.cpp
[111/628] : && /usr/bin/x86_64-pc-linux-gnu-g++ -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 src/mlpack/methods/adaboost/CMakeFiles/generate_r_adaboost.dir/__/__/bindings/R/build/generate_r_adaboost.cpp.o src/mlpack/methods/adaboost/CMakeFiles/generate_r_adaboost.dir/__/__/bindings/R/print_R.cpp.o -o src/mlpack/bindings/R/build/bin/generate_r_adaboost -Wl,-rpath,/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib lib/libmlpack.so.3.4 /usr/lib64/libarmadillo.so /usr/lib/gcc/x86_64-pc-linux-gnu/11.2.0/libgomp.so /usr/lib64/libpthread.so && cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/methods/adaboost && /usr/bin/cmake -DGENERATE_BINDING_PROGRAM=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/build/bin/generate_r_adaboost -DBINDING_OUTPUT_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/mlpack/R/adaboost.R -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/GenerateBinding.cmake
[112/628] : && /usr/bin/x86_64-pc-linux-gnu-g++ -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 src/mlpack/methods/dbscan/CMakeFiles/mlpack_dbscan.dir/dbscan_main.cpp.o -o bin/mlpack_dbscan -Wl,-rpath,/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib: lib/libmlpack.so.3.4 /usr/lib64/libarmadillo.so -lpthread /usr/lib/gcc/x86_64-pc-linux-gnu/11.2.0/libgomp.so /usr/lib64/libpthread.so && :
[113/628] cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/methods/dbscan && /usr/bin/cmake -DMODEL_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/mlpack/model.txt -DPROGRAM_NAME=dbscan -DPROGRAM_MAIN_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/methods/dbscan/dbscan_main.cpp -DSOURCE_DIR=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1 -DR_CPP_IN=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/R/r_method.cpp.in -DR_CPP_OUT=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/mlpack/src/dbscan.cpp -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/R/ConfigureRCPP.cmake
[114/628] cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/methods/dbscan && /usr/bin/cmake -DNAME=dbscan -DGENERATE_CPP_IN=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/R/generate_R.cpp.in -DGENERATE_CPP_OUT=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/build/generate_r_dbscan.cpp -DPROGRAM_MAIN_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/methods/dbscan/dbscan_main.cpp -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/ConfigureFile.cmake
[115/628] /usr/bin/x86_64-pc-linux-gnu-g++ -DARMA_NO_DEBUG -DHAS_OPENMP -DHAS_STB -DNDEBUG -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include/stb -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -DBINDING_TYPE=BINDING_TYPE_PYX -std=gnu++11 -MD -MT src/mlpack/methods/adaboost/CMakeFiles/generate_pyx_adaboost.dir/__/__/bindings/python/generate_pyx_adaboost.cpp.o -MF src/mlpack/methods/adaboost/CMakeFiles/generate_pyx_adaboost.dir/__/__/bindings/python/generate_pyx_adaboost.cpp.o.d -o src/mlpack/methods/adaboost/CMakeFiles/generate_pyx_adaboost.dir/__/__/bindings/python/generate_pyx_adaboost.cpp.o -c /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/generate_pyx_adaboost.cpp
[116/628] : && /usr/bin/x86_64-pc-linux-gnu-g++ -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 src/mlpack/methods/adaboost/CMakeFiles/generate_pyx_adaboost.dir/__/__/bindings/python/generate_pyx_adaboost.cpp.o src/mlpack/methods/adaboost/CMakeFiles/generate_pyx_adaboost.dir/__/__/bindings/python/print_pyx.cpp.o -o bin/generate_pyx_adaboost -Wl,-rpath,/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib lib/libmlpack.so.3.4 /usr/lib64/libarmadillo.so /usr/lib/gcc/x86_64-pc-linux-gnu/11.2.0/libgomp.so /usr/lib64/libpthread.so && cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/methods/adaboost && /usr/bin/cmake -DPROGRAM=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/bin/generate_pyx_adaboost -DOUTPUT_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/mlpack/adaboost.pyx -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/RunProgram.cmake
[117/628] /usr/bin/x86_64-pc-linux-gnu-g++ -DARMA_NO_DEBUG -DHAS_OPENMP -DHAS_STB -DNDEBUG -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include/stb -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -DBINDING_TYPE=BINDING_TYPE_R -std=gnu++11 -MD -MT src/mlpack/methods/approx_kfn/CMakeFiles/generate_r_approx_kfn.dir/__/__/bindings/R/build/generate_r_approx_kfn.cpp.o -MF src/mlpack/methods/approx_kfn/CMakeFiles/generate_r_approx_kfn.dir/__/__/bindings/R/build/generate_r_approx_kfn.cpp.o.d -o src/mlpack/methods/approx_kfn/CMakeFiles/generate_r_approx_kfn.dir/__/__/bindings/R/build/generate_r_approx_kfn.cpp.o -c /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/build/generate_r_approx_kfn.cpp
[118/628] : && /usr/bin/x86_64-pc-linux-gnu-g++ -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 src/mlpack/methods/approx_kfn/CMakeFiles/generate_r_approx_kfn.dir/__/__/bindings/R/build/generate_r_approx_kfn.cpp.o src/mlpack/methods/approx_kfn/CMakeFiles/generate_r_approx_kfn.dir/__/__/bindings/R/print_R.cpp.o -o src/mlpack/bindings/R/build/bin/generate_r_approx_kfn -Wl,-rpath,/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib lib/libmlpack.so.3.4 /usr/lib64/libarmadillo.so /usr/lib/gcc/x86_64-pc-linux-gnu/11.2.0/libgomp.so /usr/lib64/libpthread.so && cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/methods/approx_kfn && /usr/bin/cmake -DGENERATE_BINDING_PROGRAM=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/build/bin/generate_r_approx_kfn -DBINDING_OUTPUT_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/mlpack/R/approx_kfn.R -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/GenerateBinding.cmake
[119/628] /usr/bin/x86_64-pc-linux-gnu-g++ -DARMA_NO_DEBUG -DHAS_OPENMP -DHAS_STB -DNDEBUG -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include/stb -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -DBINDING_TYPE=BINDING_TYPE_PYX -std=gnu++11 -MD -MT src/mlpack/methods/approx_kfn/CMakeFiles/generate_pyx_approx_kfn.dir/__/__/bindings/python/generate_pyx_approx_kfn.cpp.o -MF src/mlpack/methods/approx_kfn/CMakeFiles/generate_pyx_approx_kfn.dir/__/__/bindings/python/generate_pyx_approx_kfn.cpp.o.d -o src/mlpack/methods/approx_kfn/CMakeFiles/generate_pyx_approx_kfn.dir/__/__/bindings/python/generate_pyx_approx_kfn.cpp.o -c /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/generate_pyx_approx_kfn.cpp
[120/628] : && /usr/bin/x86_64-pc-linux-gnu-g++ -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 src/mlpack/methods/approx_kfn/CMakeFiles/generate_pyx_approx_kfn.dir/__/__/bindings/python/generate_pyx_approx_kfn.cpp.o src/mlpack/methods/approx_kfn/CMakeFiles/generate_pyx_approx_kfn.dir/__/__/bindings/python/print_pyx.cpp.o -o bin/generate_pyx_approx_kfn -Wl,-rpath,/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib lib/libmlpack.so.3.4 /usr/lib64/libarmadillo.so /usr/lib/gcc/x86_64-pc-linux-gnu/11.2.0/libgomp.so /usr/lib64/libpthread.so && cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/methods/approx_kfn && /usr/bin/cmake -DPROGRAM=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/bin/generate_pyx_approx_kfn -DOUTPUT_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/mlpack/approx_kfn.pyx -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/RunProgram.cmake
[121/628] /usr/bin/x86_64-pc-linux-gnu-g++ -DARMA_NO_DEBUG -DHAS_OPENMP -DHAS_STB -DNDEBUG -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include/stb -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -DBINDING_TYPE=BINDING_TYPE_CLI -std=gnu++11 -MD -MT src/mlpack/methods/kde/CMakeFiles/mlpack_kde.dir/kde_main.cpp.o -MF src/mlpack/methods/kde/CMakeFiles/mlpack_kde.dir/kde_main.cpp.o.d -o src/mlpack/methods/kde/CMakeFiles/mlpack_kde.dir/kde_main.cpp.o -c /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/methods/kde/kde_main.cpp
[122/628] cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/methods/dbscan && /usr/bin/cmake -DGENERATE_CPP_IN=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/python/generate_pyx.cpp.in -DGENERATE_CPP_OUT=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/generate_pyx_dbscan.cpp -DPROGRAM_MAIN_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/methods/dbscan/dbscan_main.cpp -DPROGRAM_NAME=dbscan -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/ConfigureFile.cmake
[123/628] /usr/bin/x86_64-pc-linux-gnu-g++ -DARMA_NO_DEBUG -DHAS_OPENMP -DHAS_STB -DNDEBUG -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include/stb -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -DBINDING_TYPE=BINDING_TYPE_PYX -std=gnu++11 -MD -MT src/mlpack/methods/bayesian_linear_regression/CMakeFiles/generate_pyx_bayesian_linear_regression.dir/__/__/bindings/python/print_pyx.cpp.o -MF src/mlpack/methods/bayesian_linear_regression/CMakeFiles/generate_pyx_bayesian_linear_regression.dir/__/__/bindings/python/print_pyx.cpp.o.d -o src/mlpack/methods/bayesian_linear_regression/CMakeFiles/generate_pyx_bayesian_linear_regression.dir/__/__/bindings/python/print_pyx.cpp.o -c /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/python/print_pyx.cpp
[124/628] /usr/bin/x86_64-pc-linux-gnu-g++ -DARMA_NO_DEBUG -DHAS_OPENMP -DHAS_STB -DNDEBUG -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include/stb -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -DBINDING_TYPE=BINDING_TYPE_PYX -std=gnu++11 -MD -MT src/mlpack/methods/cf/CMakeFiles/generate_pyx_cf.dir/__/__/bindings/python/print_pyx.cpp.o -MF src/mlpack/methods/cf/CMakeFiles/generate_pyx_cf.dir/__/__/bindings/python/print_pyx.cpp.o.d -o src/mlpack/methods/cf/CMakeFiles/generate_pyx_cf.dir/__/__/bindings/python/print_pyx.cpp.o -c /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/python/print_pyx.cpp
[125/628] : && /usr/bin/x86_64-pc-linux-gnu-g++ -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 src/mlpack/methods/decision_tree/CMakeFiles/mlpack_decision_tree.dir/decision_tree_main.cpp.o -o bin/mlpack_decision_tree -Wl,-rpath,/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib: lib/libmlpack.so.3.4 /usr/lib64/libarmadillo.so -lpthread /usr/lib/gcc/x86_64-pc-linux-gnu/11.2.0/libgomp.so /usr/lib64/libpthread.so && :
[126/628] cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/methods/decision_tree && /usr/bin/cmake -DMODEL_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/mlpack/model.txt -DPROGRAM_NAME=decision_tree -DPROGRAM_MAIN_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/methods/decision_tree/decision_tree_main.cpp -DSOURCE_DIR=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1 -DR_CPP_IN=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/R/r_method.cpp.in -DR_CPP_OUT=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/mlpack/src/decision_tree.cpp -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/R/ConfigureRCPP.cmake
[127/628] cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/methods/decision_tree && /usr/bin/cmake -DNAME=decision_tree -DGENERATE_CPP_IN=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/R/generate_R.cpp.in -DGENERATE_CPP_OUT=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/build/generate_r_decision_tree.cpp -DPROGRAM_MAIN_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/methods/decision_tree/decision_tree_main.cpp -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/ConfigureFile.cmake
[128/628] /usr/bin/x86_64-pc-linux-gnu-g++ -DARMA_NO_DEBUG -DHAS_OPENMP -DHAS_STB -DNDEBUG -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include/stb -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -DBINDING_TYPE=BINDING_TYPE_CLI -std=gnu++11 -MD -MT src/mlpack/methods/cf/CMakeFiles/mlpack_cf.dir/cf_main.cpp.o -MF src/mlpack/methods/cf/CMakeFiles/mlpack_cf.dir/cf_main.cpp.o.d -o src/mlpack/methods/cf/CMakeFiles/mlpack_cf.dir/cf_main.cpp.o -c /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/methods/cf/cf_main.cpp
[129/628] : && /usr/bin/x86_64-pc-linux-gnu-g++ -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 src/mlpack/methods/cf/CMakeFiles/mlpack_cf.dir/cf_main.cpp.o -o bin/mlpack_cf -Wl,-rpath,/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib: lib/libmlpack.so.3.4 /usr/lib64/libarmadillo.so -lpthread /usr/lib/gcc/x86_64-pc-linux-gnu/11.2.0/libgomp.so /usr/lib64/libpthread.so && :
[130/628] /usr/bin/x86_64-pc-linux-gnu-g++ -DARMA_NO_DEBUG -DHAS_OPENMP -DHAS_STB -DNDEBUG -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include/stb -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -DBINDING_TYPE=BINDING_TYPE_R -std=gnu++11 -MD -MT src/mlpack/methods/cf/CMakeFiles/generate_r_cf.dir/__/__/bindings/R/print_R.cpp.o -MF src/mlpack/methods/cf/CMakeFiles/generate_r_cf.dir/__/__/bindings/R/print_R.cpp.o.d -o src/mlpack/methods/cf/CMakeFiles/generate_r_cf.dir/__/__/bindings/R/print_R.cpp.o -c /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/R/print_R.cpp
[131/628] cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/methods/decision_tree && /usr/bin/cmake -DGENERATE_CPP_IN=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/python/generate_pyx.cpp.in -DGENERATE_CPP_OUT=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/generate_pyx_decision_tree.cpp -DPROGRAM_MAIN_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/methods/decision_tree/decision_tree_main.cpp -DPROGRAM_NAME=decision_tree -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/ConfigureFile.cmake
[132/628] /usr/bin/x86_64-pc-linux-gnu-g++ -DARMA_NO_DEBUG -DHAS_OPENMP -DHAS_STB -DNDEBUG -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include/stb -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -DBINDING_TYPE=BINDING_TYPE_PYX -std=gnu++11 -MD -MT src/mlpack/methods/bayesian_linear_regression/CMakeFiles/generate_pyx_bayesian_linear_regression.dir/__/__/bindings/python/generate_pyx_bayesian_linear_regression.cpp.o -MF src/mlpack/methods/bayesian_linear_regression/CMakeFiles/generate_pyx_bayesian_linear_regression.dir/__/__/bindings/python/generate_pyx_bayesian_linear_regression.cpp.o.d -o src/mlpack/methods/bayesian_linear_regression/CMakeFiles/generate_pyx_bayesian_linear_regression.dir/__/__/bindings/python/generate_pyx_bayesian_linear_regression.cpp.o -c /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/generate_pyx_bayesian_linear_regression.cpp
[133/628] : && /usr/bin/x86_64-pc-linux-gnu-g++ -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 src/mlpack/methods/bayesian_linear_regression/CMakeFiles/generate_pyx_bayesian_linear_regression.dir/__/__/bindings/python/generate_pyx_bayesian_linear_regression.cpp.o src/mlpack/methods/bayesian_linear_regression/CMakeFiles/generate_pyx_bayesian_linear_regression.dir/__/__/bindings/python/print_pyx.cpp.o -o bin/generate_pyx_bayesian_linear_regression -Wl,-rpath,/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib lib/libmlpack.so.3.4 /usr/lib64/libarmadillo.so /usr/lib/gcc/x86_64-pc-linux-gnu/11.2.0/libgomp.so /usr/lib64/libpthread.so && cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/methods/bayesian_linear_regression && /usr/bin/cmake -DPROGRAM=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/bin/generate_pyx_bayesian_linear_regression -DOUTPUT_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/mlpack/bayesian_linear_regression.pyx -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/RunProgram.cmake
[134/628] /usr/bin/x86_64-pc-linux-gnu-g++ -DARMA_NO_DEBUG -DHAS_OPENMP -DHAS_STB -DNDEBUG -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include/stb -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -DBINDING_TYPE=BINDING_TYPE_R -std=gnu++11 -MD -MT src/mlpack/methods/dbscan/CMakeFiles/generate_r_dbscan.dir/__/__/bindings/R/print_R.cpp.o -MF src/mlpack/methods/dbscan/CMakeFiles/generate_r_dbscan.dir/__/__/bindings/R/print_R.cpp.o.d -o src/mlpack/methods/dbscan/CMakeFiles/generate_r_dbscan.dir/__/__/bindings/R/print_R.cpp.o -c /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/R/print_R.cpp
[135/628] /usr/bin/x86_64-pc-linux-gnu-g++ -DARMA_NO_DEBUG -DHAS_OPENMP -DHAS_STB -DNDEBUG -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include/stb -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -DBINDING_TYPE=BINDING_TYPE_PYX -std=gnu++11 -MD -MT src/mlpack/methods/dbscan/CMakeFiles/generate_pyx_dbscan.dir/__/__/bindings/python/print_pyx.cpp.o -MF src/mlpack/methods/dbscan/CMakeFiles/generate_pyx_dbscan.dir/__/__/bindings/python/print_pyx.cpp.o.d -o src/mlpack/methods/dbscan/CMakeFiles/generate_pyx_dbscan.dir/__/__/bindings/python/print_pyx.cpp.o -c /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/python/print_pyx.cpp
[136/628] /usr/bin/x86_64-pc-linux-gnu-g++ -DARMA_NO_DEBUG -DHAS_OPENMP -DHAS_STB -DNDEBUG -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include/stb -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -DBINDING_TYPE=BINDING_TYPE_R -std=gnu++11 -MD -MT src/mlpack/methods/cf/CMakeFiles/generate_r_cf.dir/__/__/bindings/R/build/generate_r_cf.cpp.o -MF src/mlpack/methods/cf/CMakeFiles/generate_r_cf.dir/__/__/bindings/R/build/generate_r_cf.cpp.o.d -o src/mlpack/methods/cf/CMakeFiles/generate_r_cf.dir/__/__/bindings/R/build/generate_r_cf.cpp.o -c /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/build/generate_r_cf.cpp
[137/628] : && /usr/bin/x86_64-pc-linux-gnu-g++ -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 src/mlpack/methods/cf/CMakeFiles/generate_r_cf.dir/__/__/bindings/R/build/generate_r_cf.cpp.o src/mlpack/methods/cf/CMakeFiles/generate_r_cf.dir/__/__/bindings/R/print_R.cpp.o -o src/mlpack/bindings/R/build/bin/generate_r_cf -Wl,-rpath,/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib lib/libmlpack.so.3.4 /usr/lib64/libarmadillo.so /usr/lib/gcc/x86_64-pc-linux-gnu/11.2.0/libgomp.so /usr/lib64/libpthread.so && cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/methods/cf && /usr/bin/cmake -DGENERATE_BINDING_PROGRAM=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/build/bin/generate_r_cf -DBINDING_OUTPUT_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/mlpack/R/cf.R -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/GenerateBinding.cmake
[138/628] /usr/bin/x86_64-pc-linux-gnu-g++ -DARMA_NO_DEBUG -DHAS_OPENMP -DHAS_STB -DNDEBUG -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include/stb -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -DBINDING_TYPE=BINDING_TYPE_R -std=gnu++11 -MD -MT src/mlpack/methods/decision_tree/CMakeFiles/generate_r_decision_tree.dir/__/__/bindings/R/print_R.cpp.o -MF src/mlpack/methods/decision_tree/CMakeFiles/generate_r_decision_tree.dir/__/__/bindings/R/print_R.cpp.o.d -o src/mlpack/methods/decision_tree/CMakeFiles/generate_r_decision_tree.dir/__/__/bindings/R/print_R.cpp.o -c /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/R/print_R.cpp
[139/628] /usr/bin/x86_64-pc-linux-gnu-g++ -DARMA_NO_DEBUG -DHAS_OPENMP -DHAS_STB -DNDEBUG -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include/stb -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -DBINDING_TYPE=BINDING_TYPE_PYX -std=gnu++11 -MD -MT src/mlpack/methods/cf/CMakeFiles/generate_pyx_cf.dir/__/__/bindings/python/generate_pyx_cf.cpp.o -MF src/mlpack/methods/cf/CMakeFiles/generate_pyx_cf.dir/__/__/bindings/python/generate_pyx_cf.cpp.o.d -o src/mlpack/methods/cf/CMakeFiles/generate_pyx_cf.dir/__/__/bindings/python/generate_pyx_cf.cpp.o -c /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/generate_pyx_cf.cpp
[140/628] : && /usr/bin/x86_64-pc-linux-gnu-g++ -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 src/mlpack/methods/cf/CMakeFiles/generate_pyx_cf.dir/__/__/bindings/python/generate_pyx_cf.cpp.o src/mlpack/methods/cf/CMakeFiles/generate_pyx_cf.dir/__/__/bindings/python/print_pyx.cpp.o -o bin/generate_pyx_cf -Wl,-rpath,/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib lib/libmlpack.so.3.4 /usr/lib64/libarmadillo.so /usr/lib/gcc/x86_64-pc-linux-gnu/11.2.0/libgomp.so /usr/lib64/libpthread.so && cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/methods/cf && /usr/bin/cmake -DPROGRAM=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/bin/generate_pyx_cf -DOUTPUT_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/mlpack/cf.pyx -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/RunProgram.cmake
[141/628] : && /usr/bin/x86_64-pc-linux-gnu-g++ -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 src/mlpack/methods/det/CMakeFiles/mlpack_det.dir/det_main.cpp.o -o bin/mlpack_det -Wl,-rpath,/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib: lib/libmlpack.so.3.4 /usr/lib64/libarmadillo.so -lpthread /usr/lib/gcc/x86_64-pc-linux-gnu/11.2.0/libgomp.so /usr/lib64/libpthread.so && :
[142/628] cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/methods/det && /usr/bin/cmake -DMODEL_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/mlpack/model.txt -DPROGRAM_NAME=det -DPROGRAM_MAIN_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/methods/det/det_main.cpp -DSOURCE_DIR=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1 -DR_CPP_IN=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/R/r_method.cpp.in -DR_CPP_OUT=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/mlpack/src/det.cpp -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/R/ConfigureRCPP.cmake
[143/628] cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/methods/det && /usr/bin/cmake -DNAME=det -DGENERATE_CPP_IN=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/R/generate_R.cpp.in -DGENERATE_CPP_OUT=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/build/generate_r_det.cpp -DPROGRAM_MAIN_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/methods/det/det_main.cpp -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/ConfigureFile.cmake
[144/628] /usr/bin/x86_64-pc-linux-gnu-g++ -DARMA_NO_DEBUG -DHAS_OPENMP -DHAS_STB -DNDEBUG -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include/stb -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -DBINDING_TYPE=BINDING_TYPE_R -std=gnu++11 -MD -MT src/mlpack/methods/decision_tree/CMakeFiles/generate_r_decision_tree.dir/__/__/bindings/R/build/generate_r_decision_tree.cpp.o -MF src/mlpack/methods/decision_tree/CMakeFiles/generate_r_decision_tree.dir/__/__/bindings/R/build/generate_r_decision_tree.cpp.o.d -o src/mlpack/methods/decision_tree/CMakeFiles/generate_r_decision_tree.dir/__/__/bindings/R/build/generate_r_decision_tree.cpp.o -c /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/build/generate_r_decision_tree.cpp
[145/628] : && /usr/bin/x86_64-pc-linux-gnu-g++ -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 src/mlpack/methods/decision_tree/CMakeFiles/generate_r_decision_tree.dir/__/__/bindings/R/build/generate_r_decision_tree.cpp.o src/mlpack/methods/decision_tree/CMakeFiles/generate_r_decision_tree.dir/__/__/bindings/R/print_R.cpp.o -o src/mlpack/bindings/R/build/bin/generate_r_decision_tree -Wl,-rpath,/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib lib/libmlpack.so.3.4 /usr/lib64/libarmadillo.so /usr/lib/gcc/x86_64-pc-linux-gnu/11.2.0/libgomp.so /usr/lib64/libpthread.so && cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/methods/decision_tree && /usr/bin/cmake -DGENERATE_BINDING_PROGRAM=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/build/bin/generate_r_decision_tree -DBINDING_OUTPUT_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/mlpack/R/decision_tree.R -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/GenerateBinding.cmake
[146/628] /usr/bin/x86_64-pc-linux-gnu-g++ -DARMA_NO_DEBUG -DHAS_OPENMP -DHAS_STB -DNDEBUG -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include/stb -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -DBINDING_TYPE=BINDING_TYPE_PYX -std=gnu++11 -MD -MT src/mlpack/methods/decision_tree/CMakeFiles/generate_pyx_decision_tree.dir/__/__/bindings/python/print_pyx.cpp.o -MF src/mlpack/methods/decision_tree/CMakeFiles/generate_pyx_decision_tree.dir/__/__/bindings/python/print_pyx.cpp.o.d -o src/mlpack/methods/decision_tree/CMakeFiles/generate_pyx_decision_tree.dir/__/__/bindings/python/print_pyx.cpp.o -c /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/python/print_pyx.cpp
[147/628] : && /usr/bin/x86_64-pc-linux-gnu-g++ -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 src/mlpack/methods/range_search/CMakeFiles/mlpack_range_search.dir/range_search_main.cpp.o -o bin/mlpack_range_search -Wl,-rpath,/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib: lib/libmlpack.so.3.4 /usr/lib64/libarmadillo.so -lpthread /usr/lib/gcc/x86_64-pc-linux-gnu/11.2.0/libgomp.so /usr/lib64/libpthread.so && :
[148/628] : && /usr/bin/x86_64-pc-linux-gnu-g++ -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 src/mlpack/methods/emst/CMakeFiles/mlpack_emst.dir/emst_main.cpp.o -o bin/mlpack_emst -Wl,-rpath,/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib: lib/libmlpack.so.3.4 /usr/lib64/libarmadillo.so -lpthread /usr/lib/gcc/x86_64-pc-linux-gnu/11.2.0/libgomp.so /usr/lib64/libpthread.so && :
[149/628] cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/methods/emst && /usr/bin/cmake -DMODEL_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/mlpack/model.txt -DPROGRAM_NAME=emst -DPROGRAM_MAIN_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/methods/emst/emst_main.cpp -DSOURCE_DIR=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1 -DR_CPP_IN=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/R/r_method.cpp.in -DR_CPP_OUT=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/mlpack/src/emst.cpp -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/R/ConfigureRCPP.cmake
[150/628] cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/methods/emst && /usr/bin/cmake -DNAME=emst -DGENERATE_CPP_IN=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/R/generate_R.cpp.in -DGENERATE_CPP_OUT=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/build/generate_r_emst.cpp -DPROGRAM_MAIN_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/methods/emst/emst_main.cpp -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/ConfigureFile.cmake
[151/628] /usr/bin/x86_64-pc-linux-gnu-g++ -DARMA_NO_DEBUG -DHAS_OPENMP -DHAS_STB -DNDEBUG -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include/stb -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -DBINDING_TYPE=BINDING_TYPE_PYX -std=gnu++11 -MD -MT src/mlpack/methods/decision_tree/CMakeFiles/generate_pyx_decision_tree.dir/__/__/bindings/python/generate_pyx_decision_tree.cpp.o -MF src/mlpack/methods/decision_tree/CMakeFiles/generate_pyx_decision_tree.dir/__/__/bindings/python/generate_pyx_decision_tree.cpp.o.d -o src/mlpack/methods/decision_tree/CMakeFiles/generate_pyx_decision_tree.dir/__/__/bindings/python/generate_pyx_decision_tree.cpp.o -c /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/generate_pyx_decision_tree.cpp
[152/628] : && /usr/bin/x86_64-pc-linux-gnu-g++ -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 src/mlpack/methods/decision_tree/CMakeFiles/generate_pyx_decision_tree.dir/__/__/bindings/python/generate_pyx_decision_tree.cpp.o src/mlpack/methods/decision_tree/CMakeFiles/generate_pyx_decision_tree.dir/__/__/bindings/python/print_pyx.cpp.o -o bin/generate_pyx_decision_tree -Wl,-rpath,/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib lib/libmlpack.so.3.4 /usr/lib64/libarmadillo.so /usr/lib/gcc/x86_64-pc-linux-gnu/11.2.0/libgomp.so /usr/lib64/libpthread.so && cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/methods/decision_tree && /usr/bin/cmake -DPROGRAM=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/bin/generate_pyx_decision_tree -DOUTPUT_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/mlpack/decision_tree.pyx -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/RunProgram.cmake
[153/628] /usr/bin/x86_64-pc-linux-gnu-g++ -DARMA_NO_DEBUG -DHAS_OPENMP -DHAS_STB -DNDEBUG -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include/stb -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -DBINDING_TYPE=BINDING_TYPE_R -std=gnu++11 -MD -MT src/mlpack/methods/dbscan/CMakeFiles/generate_r_dbscan.dir/__/__/bindings/R/build/generate_r_dbscan.cpp.o -MF src/mlpack/methods/dbscan/CMakeFiles/generate_r_dbscan.dir/__/__/bindings/R/build/generate_r_dbscan.cpp.o.d -o src/mlpack/methods/dbscan/CMakeFiles/generate_r_dbscan.dir/__/__/bindings/R/build/generate_r_dbscan.cpp.o -c /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/build/generate_r_dbscan.cpp
[154/628] /usr/bin/x86_64-pc-linux-gnu-g++ -DARMA_NO_DEBUG -DHAS_OPENMP -DHAS_STB -DNDEBUG -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include/stb -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -DBINDING_TYPE=BINDING_TYPE_PYX -std=gnu++11 -MD -MT src/mlpack/methods/det/CMakeFiles/generate_pyx_det.dir/__/__/bindings/python/print_pyx.cpp.o -MF src/mlpack/methods/det/CMakeFiles/generate_pyx_det.dir/__/__/bindings/python/print_pyx.cpp.o.d -o src/mlpack/methods/det/CMakeFiles/generate_pyx_det.dir/__/__/bindings/python/print_pyx.cpp.o -c /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/python/print_pyx.cpp
[155/628] cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python && /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/temp/python3.9/bin/python /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/setup.py build_ext --module=adaboost.pyx
running build_ext
cythoning mlpack/adaboost.pyx to mlpack/adaboost.cpp
/usr/lib/python3.9/site-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/mlpack/adaboost.pyx
tree = Parsing.p_module(s, pxd, full_module_name)
building 'mlpack.adaboost' extension
creating build/temp.linux-x86_64-3.9
creating build/temp.linux-x86_64-3.9/mlpack
x86_64-pc-linux-gnu-g++ -pthread -Os -pipe -march=native -frecord-gcc-switches -fPIC -I/usr/lib/python3.9/site-packages/numpy/core/include -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/ -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include -I/usr/include -I/usr/include -I/usr/include/stb -I/usr/include -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -I/usr/include/python3.9 -c mlpack/adaboost.cpp -o build/temp.linux-x86_64-3.9/mlpack/adaboost.o -DBINDING_TYPE=BINDING_TYPE_PYX -std=c++11 -fopenmp -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp
In file included from /usr/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h:1969,
from /usr/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h:12,
from /usr/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h:4,
from mlpack/adaboost.cpp:635:
/usr/lib/python3.9/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
17 | #warning "Using deprecated NumPy API, disable it with " \
| ^~~~~~~
creating build/lib.linux-x86_64-3.9
creating build/lib.linux-x86_64-3.9/mlpack
x86_64-pc-linux-gnu-g++ -pthread -shared -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 -Os -pipe -march=native -frecord-gcc-switches build/temp.linux-x86_64-3.9/mlpack/adaboost.o -L/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib -L/usr/lib64 -o build/lib.linux-x86_64-3.9/mlpack/adaboost.cpython-39-x86_64-linux-gnu.so -fopenmp /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib/libmlpack.so /usr/lib64/libarmadillo.so
[156/628] cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python && /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/temp/python3.9/bin/python /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/setup.py build_ext --module=approx_kfn.pyx
running build_ext
cythoning mlpack/approx_kfn.pyx to mlpack/approx_kfn.cpp
/usr/lib/python3.9/site-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/mlpack/approx_kfn.pyx
tree = Parsing.p_module(s, pxd, full_module_name)
building 'mlpack.approx_kfn' extension
x86_64-pc-linux-gnu-g++ -pthread -Os -pipe -march=native -frecord-gcc-switches -fPIC -I/usr/lib/python3.9/site-packages/numpy/core/include -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/ -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include -I/usr/include -I/usr/include -I/usr/include/stb -I/usr/include -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -I/usr/include/python3.9 -c mlpack/approx_kfn.cpp -o build/temp.linux-x86_64-3.9/mlpack/approx_kfn.o -DBINDING_TYPE=BINDING_TYPE_PYX -std=c++11 -fopenmp -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp
In file included from /usr/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h:1969,
from /usr/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h:12,
from /usr/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h:4,
from mlpack/approx_kfn.cpp:635:
/usr/lib/python3.9/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
17 | #warning "Using deprecated NumPy API, disable it with " \
| ^~~~~~~
x86_64-pc-linux-gnu-g++ -pthread -shared -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 -Os -pipe -march=native -frecord-gcc-switches build/temp.linux-x86_64-3.9/mlpack/approx_kfn.o -L/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib -L/usr/lib64 -o build/lib.linux-x86_64-3.9/mlpack/approx_kfn.cpython-39-x86_64-linux-gnu.so -fopenmp /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib/libmlpack.so /usr/lib64/libarmadillo.so
[157/628] cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python && /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/temp/python3.9/bin/python /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/setup.py build_ext --module=bayesian_linear_regression.pyx
running build_ext
cythoning mlpack/bayesian_linear_regression.pyx to mlpack/bayesian_linear_regression.cpp
/usr/lib/python3.9/site-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/mlpack/bayesian_linear_regression.pyx
tree = Parsing.p_module(s, pxd, full_module_name)
building 'mlpack.bayesian_linear_regression' extension
x86_64-pc-linux-gnu-g++ -pthread -Os -pipe -march=native -frecord-gcc-switches -fPIC -I/usr/lib/python3.9/site-packages/numpy/core/include -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/ -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include -I/usr/include -I/usr/include -I/usr/include/stb -I/usr/include -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -I/usr/include/python3.9 -c mlpack/bayesian_linear_regression.cpp -o build/temp.linux-x86_64-3.9/mlpack/bayesian_linear_regression.o -DBINDING_TYPE=BINDING_TYPE_PYX -std=c++11 -fopenmp -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp
In file included from /usr/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h:1969,
from /usr/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h:12,
from /usr/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h:4,
from mlpack/bayesian_linear_regression.cpp:635:
/usr/lib/python3.9/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
17 | #warning "Using deprecated NumPy API, disable it with " \
| ^~~~~~~
x86_64-pc-linux-gnu-g++ -pthread -shared -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 -Os -pipe -march=native -frecord-gcc-switches build/temp.linux-x86_64-3.9/mlpack/bayesian_linear_regression.o -L/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib -L/usr/lib64 -o build/lib.linux-x86_64-3.9/mlpack/bayesian_linear_regression.cpython-39-x86_64-linux-gnu.so -fopenmp /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib/libmlpack.so /usr/lib64/libarmadillo.so
[158/628] /usr/bin/x86_64-pc-linux-gnu-g++ -DARMA_NO_DEBUG -DHAS_OPENMP -DHAS_STB -DNDEBUG -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include/stb -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -DBINDING_TYPE=BINDING_TYPE_PYX -std=gnu++11 -MD -MT src/mlpack/methods/det/CMakeFiles/generate_pyx_det.dir/__/__/bindings/python/generate_pyx_det.cpp.o -MF src/mlpack/methods/det/CMakeFiles/generate_pyx_det.dir/__/__/bindings/python/generate_pyx_det.cpp.o.d -o src/mlpack/methods/det/CMakeFiles/generate_pyx_det.dir/__/__/bindings/python/generate_pyx_det.cpp.o -c /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/generate_pyx_det.cpp
[159/628] /usr/bin/x86_64-pc-linux-gnu-g++ -DARMA_NO_DEBUG -DHAS_OPENMP -DHAS_STB -DNDEBUG -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include/stb -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -DBINDING_TYPE=BINDING_TYPE_PYX -std=gnu++11 -MD -MT src/mlpack/methods/dbscan/CMakeFiles/generate_pyx_dbscan.dir/__/__/bindings/python/generate_pyx_dbscan.cpp.o -MF src/mlpack/methods/dbscan/CMakeFiles/generate_pyx_dbscan.dir/__/__/bindings/python/generate_pyx_dbscan.cpp.o.d -o src/mlpack/methods/dbscan/CMakeFiles/generate_pyx_dbscan.dir/__/__/bindings/python/generate_pyx_dbscan.cpp.o -c /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/generate_pyx_dbscan.cpp
[160/628] cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/methods/emst && /usr/bin/cmake -DGENERATE_CPP_IN=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/python/generate_pyx.cpp.in -DGENERATE_CPP_OUT=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/generate_pyx_emst.cpp -DPROGRAM_MAIN_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/methods/emst/emst_main.cpp -DPROGRAM_NAME=emst -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/ConfigureFile.cmake
[161/628] cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/methods/fastmks && /usr/bin/cmake -DGENERATE_CPP_IN=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/python/generate_pyx.cpp.in -DGENERATE_CPP_OUT=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/generate_pyx_fastmks.cpp -DPROGRAM_MAIN_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/methods/fastmks/fastmks_main.cpp -DPROGRAM_NAME=fastmks -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/ConfigureFile.cmake
[162/628] /usr/bin/x86_64-pc-linux-gnu-g++ -DARMA_NO_DEBUG -DHAS_OPENMP -DHAS_STB -DNDEBUG -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include/stb -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -DBINDING_TYPE=BINDING_TYPE_R -std=gnu++11 -MD -MT src/mlpack/methods/det/CMakeFiles/generate_r_det.dir/__/__/bindings/R/build/generate_r_det.cpp.o -MF src/mlpack/methods/det/CMakeFiles/generate_r_det.dir/__/__/bindings/R/build/generate_r_det.cpp.o.d -o src/mlpack/methods/det/CMakeFiles/generate_r_det.dir/__/__/bindings/R/build/generate_r_det.cpp.o -c /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/build/generate_r_det.cpp
[163/628] : && /usr/bin/x86_64-pc-linux-gnu-g++ -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 src/mlpack/methods/det/CMakeFiles/generate_pyx_det.dir/__/__/bindings/python/generate_pyx_det.cpp.o src/mlpack/methods/det/CMakeFiles/generate_pyx_det.dir/__/__/bindings/python/print_pyx.cpp.o -o bin/generate_pyx_det -Wl,-rpath,/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib lib/libmlpack.so.3.4 /usr/lib64/libarmadillo.so /usr/lib/gcc/x86_64-pc-linux-gnu/11.2.0/libgomp.so /usr/lib64/libpthread.so && cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/methods/det && /usr/bin/cmake -DPROGRAM=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/bin/generate_pyx_det -DOUTPUT_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/mlpack/det.pyx -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/RunProgram.cmake
[164/628] : && /usr/bin/x86_64-pc-linux-gnu-g++ -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 src/mlpack/methods/dbscan/CMakeFiles/generate_pyx_dbscan.dir/__/__/bindings/python/generate_pyx_dbscan.cpp.o src/mlpack/methods/dbscan/CMakeFiles/generate_pyx_dbscan.dir/__/__/bindings/python/print_pyx.cpp.o -o bin/generate_pyx_dbscan -Wl,-rpath,/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib lib/libmlpack.so.3.4 /usr/lib64/libarmadillo.so /usr/lib/gcc/x86_64-pc-linux-gnu/11.2.0/libgomp.so /usr/lib64/libpthread.so && cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/methods/dbscan && /usr/bin/cmake -DPROGRAM=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/bin/generate_pyx_dbscan -DOUTPUT_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/mlpack/dbscan.pyx -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/RunProgram.cmake
[165/628] : && /usr/bin/x86_64-pc-linux-gnu-g++ -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 src/mlpack/methods/dbscan/CMakeFiles/generate_r_dbscan.dir/__/__/bindings/R/build/generate_r_dbscan.cpp.o src/mlpack/methods/dbscan/CMakeFiles/generate_r_dbscan.dir/__/__/bindings/R/print_R.cpp.o -o src/mlpack/bindings/R/build/bin/generate_r_dbscan -Wl,-rpath,/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib lib/libmlpack.so.3.4 /usr/lib64/libarmadillo.so /usr/lib/gcc/x86_64-pc-linux-gnu/11.2.0/libgomp.so /usr/lib64/libpthread.so && cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/methods/dbscan && /usr/bin/cmake -DGENERATE_BINDING_PROGRAM=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/build/bin/generate_r_dbscan -DBINDING_OUTPUT_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/mlpack/R/dbscan.R -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/GenerateBinding.cmake
[166/628] : && /usr/bin/x86_64-pc-linux-gnu-g++ -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 src/mlpack/methods/fastmks/CMakeFiles/mlpack_fastmks.dir/fastmks_main.cpp.o -o bin/mlpack_fastmks -Wl,-rpath,/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib: lib/libmlpack.so.3.4 /usr/lib64/libarmadillo.so -lpthread /usr/lib/gcc/x86_64-pc-linux-gnu/11.2.0/libgomp.so /usr/lib64/libpthread.so && :
[167/628] cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/methods/fastmks && /usr/bin/cmake -DMODEL_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/mlpack/model.txt -DPROGRAM_NAME=fastmks -DPROGRAM_MAIN_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/methods/fastmks/fastmks_main.cpp -DSOURCE_DIR=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1 -DR_CPP_IN=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/R/r_method.cpp.in -DR_CPP_OUT=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/mlpack/src/fastmks.cpp -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/R/ConfigureRCPP.cmake
[168/628] cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/methods/fastmks && /usr/bin/cmake -DNAME=fastmks -DGENERATE_CPP_IN=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/R/generate_R.cpp.in -DGENERATE_CPP_OUT=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/build/generate_r_fastmks.cpp -DPROGRAM_MAIN_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/methods/fastmks/fastmks_main.cpp -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/ConfigureFile.cmake
[169/628] /usr/bin/x86_64-pc-linux-gnu-g++ -DARMA_NO_DEBUG -DHAS_OPENMP -DHAS_STB -DNDEBUG -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include/stb -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -DBINDING_TYPE=BINDING_TYPE_R -std=gnu++11 -MD -MT src/mlpack/methods/det/CMakeFiles/generate_r_det.dir/__/__/bindings/R/print_R.cpp.o -MF src/mlpack/methods/det/CMakeFiles/generate_r_det.dir/__/__/bindings/R/print_R.cpp.o.d -o src/mlpack/methods/det/CMakeFiles/generate_r_det.dir/__/__/bindings/R/print_R.cpp.o -c /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/R/print_R.cpp
[170/628] : && /usr/bin/x86_64-pc-linux-gnu-g++ -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 src/mlpack/methods/det/CMakeFiles/generate_r_det.dir/__/__/bindings/R/build/generate_r_det.cpp.o src/mlpack/methods/det/CMakeFiles/generate_r_det.dir/__/__/bindings/R/print_R.cpp.o -o src/mlpack/bindings/R/build/bin/generate_r_det -Wl,-rpath,/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib lib/libmlpack.so.3.4 /usr/lib64/libarmadillo.so /usr/lib/gcc/x86_64-pc-linux-gnu/11.2.0/libgomp.so /usr/lib64/libpthread.so && cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/methods/det && /usr/bin/cmake -DGENERATE_BINDING_PROGRAM=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/build/bin/generate_r_det -DBINDING_OUTPUT_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/mlpack/R/det.R -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/GenerateBinding.cmake
[171/628] /usr/bin/x86_64-pc-linux-gnu-g++ -DARMA_NO_DEBUG -DHAS_OPENMP -DHAS_STB -DNDEBUG -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include/stb -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -DBINDING_TYPE=BINDING_TYPE_R -std=gnu++11 -MD -MT src/mlpack/methods/emst/CMakeFiles/generate_r_emst.dir/__/__/bindings/R/build/generate_r_emst.cpp.o -MF src/mlpack/methods/emst/CMakeFiles/generate_r_emst.dir/__/__/bindings/R/build/generate_r_emst.cpp.o.d -o src/mlpack/methods/emst/CMakeFiles/generate_r_emst.dir/__/__/bindings/R/build/generate_r_emst.cpp.o -c /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/build/generate_r_emst.cpp
[172/628] : && /usr/bin/x86_64-pc-linux-gnu-g++ -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 src/mlpack/methods/gmm/CMakeFiles/mlpack_gmm_probability.dir/gmm_probability_main.cpp.o -o bin/mlpack_gmm_probability -Wl,-rpath,/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib: lib/libmlpack.so.3.4 /usr/lib64/libarmadillo.so -lpthread /usr/lib/gcc/x86_64-pc-linux-gnu/11.2.0/libgomp.so /usr/lib64/libpthread.so && :
[173/628] : && /usr/bin/x86_64-pc-linux-gnu-g++ -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 src/mlpack/methods/gmm/CMakeFiles/mlpack_gmm_generate.dir/gmm_generate_main.cpp.o -o bin/mlpack_gmm_generate -Wl,-rpath,/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib: lib/libmlpack.so.3.4 /usr/lib64/libarmadillo.so -lpthread /usr/lib/gcc/x86_64-pc-linux-gnu/11.2.0/libgomp.so /usr/lib64/libpthread.so && :
[174/628] : && /usr/bin/x86_64-pc-linux-gnu-g++ -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 src/mlpack/methods/gmm/CMakeFiles/mlpack_gmm_train.dir/gmm_train_main.cpp.o -o bin/mlpack_gmm_train -Wl,-rpath,/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib: lib/libmlpack.so.3.4 /usr/lib64/libarmadillo.so -lpthread /usr/lib/gcc/x86_64-pc-linux-gnu/11.2.0/libgomp.so /usr/lib64/libpthread.so && :
[175/628] cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/methods/gmm && /usr/bin/cmake -DMODEL_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/mlpack/model.txt -DPROGRAM_NAME=gmm_generate -DPROGRAM_MAIN_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/methods/gmm/gmm_generate_main.cpp -DSOURCE_DIR=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1 -DR_CPP_IN=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/R/r_method.cpp.in -DR_CPP_OUT=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/mlpack/src/gmm_generate.cpp -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/R/ConfigureRCPP.cmake
[176/628] cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/methods/gmm && /usr/bin/cmake -DNAME=gmm_generate -DGENERATE_CPP_IN=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/R/generate_R.cpp.in -DGENERATE_CPP_OUT=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/build/generate_r_gmm_generate.cpp -DPROGRAM_MAIN_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/methods/gmm/gmm_generate_main.cpp -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/ConfigureFile.cmake
[177/628] /usr/bin/x86_64-pc-linux-gnu-g++ -DARMA_NO_DEBUG -DHAS_OPENMP -DHAS_STB -DNDEBUG -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include/stb -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -DBINDING_TYPE=BINDING_TYPE_R -std=gnu++11 -MD -MT src/mlpack/methods/emst/CMakeFiles/generate_r_emst.dir/__/__/bindings/R/print_R.cpp.o -MF src/mlpack/methods/emst/CMakeFiles/generate_r_emst.dir/__/__/bindings/R/print_R.cpp.o.d -o src/mlpack/methods/emst/CMakeFiles/generate_r_emst.dir/__/__/bindings/R/print_R.cpp.o -c /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/R/print_R.cpp
[178/628] /usr/bin/x86_64-pc-linux-gnu-g++ -DARMA_NO_DEBUG -DHAS_OPENMP -DHAS_STB -DNDEBUG -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include/stb -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -DBINDING_TYPE=BINDING_TYPE_PYX -std=gnu++11 -MD -MT src/mlpack/methods/emst/CMakeFiles/generate_pyx_emst.dir/__/__/bindings/python/print_pyx.cpp.o -MF src/mlpack/methods/emst/CMakeFiles/generate_pyx_emst.dir/__/__/bindings/python/print_pyx.cpp.o.d -o src/mlpack/methods/emst/CMakeFiles/generate_pyx_emst.dir/__/__/bindings/python/print_pyx.cpp.o -c /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/python/print_pyx.cpp
[179/628] : && /usr/bin/x86_64-pc-linux-gnu-g++ -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 src/mlpack/methods/emst/CMakeFiles/generate_r_emst.dir/__/__/bindings/R/build/generate_r_emst.cpp.o src/mlpack/methods/emst/CMakeFiles/generate_r_emst.dir/__/__/bindings/R/print_R.cpp.o -o src/mlpack/bindings/R/build/bin/generate_r_emst -Wl,-rpath,/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib lib/libmlpack.so.3.4 /usr/lib64/libarmadillo.so /usr/lib/gcc/x86_64-pc-linux-gnu/11.2.0/libgomp.so /usr/lib64/libpthread.so && cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/methods/emst && /usr/bin/cmake -DGENERATE_BINDING_PROGRAM=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/build/bin/generate_r_emst -DBINDING_OUTPUT_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/mlpack/R/emst.R -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/GenerateBinding.cmake
[180/628] cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/methods/gmm && /usr/bin/cmake -DGENERATE_CPP_IN=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/python/generate_pyx.cpp.in -DGENERATE_CPP_OUT=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/generate_pyx_gmm_train.cpp -DPROGRAM_MAIN_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/methods/gmm/gmm_train_main.cpp -DPROGRAM_NAME=gmm_train -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/ConfigureFile.cmake
[181/628] /usr/bin/x86_64-pc-linux-gnu-g++ -DARMA_NO_DEBUG -DHAS_OPENMP -DHAS_STB -DNDEBUG -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include/stb -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -DBINDING_TYPE=BINDING_TYPE_PYX -std=gnu++11 -MD -MT src/mlpack/methods/fastmks/CMakeFiles/generate_pyx_fastmks.dir/__/__/bindings/python/print_pyx.cpp.o -MF src/mlpack/methods/fastmks/CMakeFiles/generate_pyx_fastmks.dir/__/__/bindings/python/print_pyx.cpp.o.d -o src/mlpack/methods/fastmks/CMakeFiles/generate_pyx_fastmks.dir/__/__/bindings/python/print_pyx.cpp.o -c /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/python/print_pyx.cpp
[182/628] /usr/bin/x86_64-pc-linux-gnu-g++ -DARMA_NO_DEBUG -DHAS_OPENMP -DHAS_STB -DNDEBUG -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include/stb -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -DBINDING_TYPE=BINDING_TYPE_R -std=gnu++11 -MD -MT src/mlpack/methods/fastmks/CMakeFiles/generate_r_fastmks.dir/__/__/bindings/R/print_R.cpp.o -MF src/mlpack/methods/fastmks/CMakeFiles/generate_r_fastmks.dir/__/__/bindings/R/print_R.cpp.o.d -o src/mlpack/methods/fastmks/CMakeFiles/generate_r_fastmks.dir/__/__/bindings/R/print_R.cpp.o -c /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/R/print_R.cpp
[183/628] cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/methods/gmm && /usr/bin/cmake -DMODEL_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/mlpack/model.txt -DPROGRAM_NAME=gmm_train -DPROGRAM_MAIN_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/methods/gmm/gmm_train_main.cpp -DSOURCE_DIR=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1 -DR_CPP_IN=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/R/r_method.cpp.in -DR_CPP_OUT=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/mlpack/src/gmm_train.cpp -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/R/ConfigureRCPP.cmake
[184/628] cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/methods/gmm && /usr/bin/cmake -DNAME=gmm_train -DGENERATE_CPP_IN=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/R/generate_R.cpp.in -DGENERATE_CPP_OUT=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/build/generate_r_gmm_train.cpp -DPROGRAM_MAIN_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/methods/gmm/gmm_train_main.cpp -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/ConfigureFile.cmake
[185/628] /usr/bin/x86_64-pc-linux-gnu-g++ -DARMA_NO_DEBUG -DHAS_OPENMP -DHAS_STB -DNDEBUG -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include/stb -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -DBINDING_TYPE=BINDING_TYPE_PYX -std=gnu++11 -MD -MT src/mlpack/methods/emst/CMakeFiles/generate_pyx_emst.dir/__/__/bindings/python/generate_pyx_emst.cpp.o -MF src/mlpack/methods/emst/CMakeFiles/generate_pyx_emst.dir/__/__/bindings/python/generate_pyx_emst.cpp.o.d -o src/mlpack/methods/emst/CMakeFiles/generate_pyx_emst.dir/__/__/bindings/python/generate_pyx_emst.cpp.o -c /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/generate_pyx_emst.cpp
[186/628] : && /usr/bin/x86_64-pc-linux-gnu-g++ -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 src/mlpack/methods/emst/CMakeFiles/generate_pyx_emst.dir/__/__/bindings/python/generate_pyx_emst.cpp.o src/mlpack/methods/emst/CMakeFiles/generate_pyx_emst.dir/__/__/bindings/python/print_pyx.cpp.o -o bin/generate_pyx_emst -Wl,-rpath,/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib lib/libmlpack.so.3.4 /usr/lib64/libarmadillo.so /usr/lib/gcc/x86_64-pc-linux-gnu/11.2.0/libgomp.so /usr/lib64/libpthread.so && cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/methods/emst && /usr/bin/cmake -DPROGRAM=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/bin/generate_pyx_emst -DOUTPUT_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/mlpack/emst.pyx -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/RunProgram.cmake
[187/628] /usr/bin/x86_64-pc-linux-gnu-g++ -DARMA_NO_DEBUG -DHAS_OPENMP -DHAS_STB -DNDEBUG -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include/stb -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -DBINDING_TYPE=BINDING_TYPE_R -std=gnu++11 -MD -MT src/mlpack/methods/gmm/CMakeFiles/generate_r_gmm_generate.dir/__/__/bindings/R/build/generate_r_gmm_generate.cpp.o -MF src/mlpack/methods/gmm/CMakeFiles/generate_r_gmm_generate.dir/__/__/bindings/R/build/generate_r_gmm_generate.cpp.o.d -o src/mlpack/methods/gmm/CMakeFiles/generate_r_gmm_generate.dir/__/__/bindings/R/build/generate_r_gmm_generate.cpp.o -c /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/build/generate_r_gmm_generate.cpp
[188/628] /usr/bin/x86_64-pc-linux-gnu-g++ -DARMA_NO_DEBUG -DHAS_OPENMP -DHAS_STB -DNDEBUG -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include/stb -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -DBINDING_TYPE=BINDING_TYPE_R -std=gnu++11 -MD -MT src/mlpack/methods/fastmks/CMakeFiles/generate_r_fastmks.dir/__/__/bindings/R/build/generate_r_fastmks.cpp.o -MF src/mlpack/methods/fastmks/CMakeFiles/generate_r_fastmks.dir/__/__/bindings/R/build/generate_r_fastmks.cpp.o.d -o src/mlpack/methods/fastmks/CMakeFiles/generate_r_fastmks.dir/__/__/bindings/R/build/generate_r_fastmks.cpp.o -c /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/build/generate_r_fastmks.cpp
[189/628] : && /usr/bin/x86_64-pc-linux-gnu-g++ -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 src/mlpack/methods/fastmks/CMakeFiles/generate_r_fastmks.dir/__/__/bindings/R/build/generate_r_fastmks.cpp.o src/mlpack/methods/fastmks/CMakeFiles/generate_r_fastmks.dir/__/__/bindings/R/print_R.cpp.o -o src/mlpack/bindings/R/build/bin/generate_r_fastmks -Wl,-rpath,/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib lib/libmlpack.so.3.4 /usr/lib64/libarmadillo.so /usr/lib/gcc/x86_64-pc-linux-gnu/11.2.0/libgomp.so /usr/lib64/libpthread.so && cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/methods/fastmks && /usr/bin/cmake -DGENERATE_BINDING_PROGRAM=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/build/bin/generate_r_fastmks -DBINDING_OUTPUT_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/mlpack/R/fastmks.R -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/GenerateBinding.cmake
[190/628] cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/methods/gmm && /usr/bin/cmake -DGENERATE_CPP_IN=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/python/generate_pyx.cpp.in -DGENERATE_CPP_OUT=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/generate_pyx_gmm_probability.cpp -DPROGRAM_MAIN_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/methods/gmm/gmm_probability_main.cpp -DPROGRAM_NAME=gmm_probability -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/ConfigureFile.cmake
[191/628] cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python && /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/temp/python3.9/bin/python /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/setup.py build_ext --module=decision_tree.pyx
running build_ext
cythoning mlpack/decision_tree.pyx to mlpack/decision_tree.cpp
/usr/lib/python3.9/site-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/mlpack/decision_tree.pyx
tree = Parsing.p_module(s, pxd, full_module_name)
building 'mlpack.decision_tree' extension
x86_64-pc-linux-gnu-g++ -pthread -Os -pipe -march=native -frecord-gcc-switches -fPIC -I/usr/lib/python3.9/site-packages/numpy/core/include -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/ -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include -I/usr/include -I/usr/include -I/usr/include/stb -I/usr/include -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -I/usr/include/python3.9 -c mlpack/decision_tree.cpp -o build/temp.linux-x86_64-3.9/mlpack/decision_tree.o -DBINDING_TYPE=BINDING_TYPE_PYX -std=c++11 -fopenmp -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp
In file included from /usr/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h:1969,
from /usr/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h:12,
from /usr/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h:4,
from mlpack/decision_tree.cpp:635:
/usr/lib/python3.9/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
17 | #warning "Using deprecated NumPy API, disable it with " \
| ^~~~~~~
x86_64-pc-linux-gnu-g++ -pthread -shared -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 -Os -pipe -march=native -frecord-gcc-switches build/temp.linux-x86_64-3.9/mlpack/decision_tree.o -L/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib -L/usr/lib64 -o build/lib.linux-x86_64-3.9/mlpack/decision_tree.cpython-39-x86_64-linux-gnu.so -fopenmp /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib/libmlpack.so /usr/lib64/libarmadillo.so
[192/628] /usr/bin/x86_64-pc-linux-gnu-g++ -DARMA_NO_DEBUG -DHAS_OPENMP -DHAS_STB -DNDEBUG -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include/stb -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -DBINDING_TYPE=BINDING_TYPE_PYX -std=gnu++11 -MD -MT src/mlpack/methods/fastmks/CMakeFiles/generate_pyx_fastmks.dir/__/__/bindings/python/generate_pyx_fastmks.cpp.o -MF src/mlpack/methods/fastmks/CMakeFiles/generate_pyx_fastmks.dir/__/__/bindings/python/generate_pyx_fastmks.cpp.o.d -o src/mlpack/methods/fastmks/CMakeFiles/generate_pyx_fastmks.dir/__/__/bindings/python/generate_pyx_fastmks.cpp.o -c /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/generate_pyx_fastmks.cpp
[193/628] : && /usr/bin/x86_64-pc-linux-gnu-g++ -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 src/mlpack/methods/fastmks/CMakeFiles/generate_pyx_fastmks.dir/__/__/bindings/python/generate_pyx_fastmks.cpp.o src/mlpack/methods/fastmks/CMakeFiles/generate_pyx_fastmks.dir/__/__/bindings/python/print_pyx.cpp.o -o bin/generate_pyx_fastmks -Wl,-rpath,/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib lib/libmlpack.so.3.4 /usr/lib64/libarmadillo.so /usr/lib/gcc/x86_64-pc-linux-gnu/11.2.0/libgomp.so /usr/lib64/libpthread.so && cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/methods/fastmks && /usr/bin/cmake -DPROGRAM=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/bin/generate_pyx_fastmks -DOUTPUT_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/mlpack/fastmks.pyx -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/RunProgram.cmake
[194/628] /usr/bin/x86_64-pc-linux-gnu-g++ -DARMA_NO_DEBUG -DHAS_OPENMP -DHAS_STB -DNDEBUG -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include/stb -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -DBINDING_TYPE=BINDING_TYPE_R -std=gnu++11 -MD -MT src/mlpack/methods/gmm/CMakeFiles/generate_r_gmm_generate.dir/__/__/bindings/R/print_R.cpp.o -MF src/mlpack/methods/gmm/CMakeFiles/generate_r_gmm_generate.dir/__/__/bindings/R/print_R.cpp.o.d -o src/mlpack/methods/gmm/CMakeFiles/generate_r_gmm_generate.dir/__/__/bindings/R/print_R.cpp.o -c /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/R/print_R.cpp
[195/628] : && /usr/bin/x86_64-pc-linux-gnu-g++ -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 src/mlpack/methods/gmm/CMakeFiles/generate_r_gmm_generate.dir/__/__/bindings/R/build/generate_r_gmm_generate.cpp.o src/mlpack/methods/gmm/CMakeFiles/generate_r_gmm_generate.dir/__/__/bindings/R/print_R.cpp.o -o src/mlpack/bindings/R/build/bin/generate_r_gmm_generate -Wl,-rpath,/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib lib/libmlpack.so.3.4 /usr/lib64/libarmadillo.so /usr/lib/gcc/x86_64-pc-linux-gnu/11.2.0/libgomp.so /usr/lib64/libpthread.so && cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/methods/gmm && /usr/bin/cmake -DGENERATE_BINDING_PROGRAM=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/build/bin/generate_r_gmm_generate -DBINDING_OUTPUT_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/mlpack/R/gmm_generate.R -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/GenerateBinding.cmake
[196/628] cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/methods/gmm && /usr/bin/cmake -DMODEL_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/mlpack/model.txt -DPROGRAM_NAME=gmm_probability -DPROGRAM_MAIN_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/methods/gmm/gmm_probability_main.cpp -DSOURCE_DIR=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1 -DR_CPP_IN=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/R/r_method.cpp.in -DR_CPP_OUT=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/mlpack/src/gmm_probability.cpp -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/R/ConfigureRCPP.cmake
[197/628] cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/methods/gmm && /usr/bin/cmake -DNAME=gmm_probability -DGENERATE_CPP_IN=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/R/generate_R.cpp.in -DGENERATE_CPP_OUT=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/build/generate_r_gmm_probability.cpp -DPROGRAM_MAIN_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/methods/gmm/gmm_probability_main.cpp -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/ConfigureFile.cmake
[198/628] /usr/bin/x86_64-pc-linux-gnu-g++ -DARMA_NO_DEBUG -DHAS_OPENMP -DHAS_STB -DNDEBUG -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include/stb -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -DBINDING_TYPE=BINDING_TYPE_PYX -std=gnu++11 -MD -MT src/mlpack/methods/gmm/CMakeFiles/generate_pyx_gmm_train.dir/__/__/bindings/python/print_pyx.cpp.o -MF src/mlpack/methods/gmm/CMakeFiles/generate_pyx_gmm_train.dir/__/__/bindings/python/print_pyx.cpp.o.d -o src/mlpack/methods/gmm/CMakeFiles/generate_pyx_gmm_train.dir/__/__/bindings/python/print_pyx.cpp.o -c /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/python/print_pyx.cpp
[199/628] cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python && /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/temp/python3.9/bin/python /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/setup.py build_ext --module=det.pyx
running build_ext
cythoning mlpack/det.pyx to mlpack/det.cpp
/usr/lib/python3.9/site-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/mlpack/det.pyx
tree = Parsing.p_module(s, pxd, full_module_name)
building 'mlpack.det' extension
x86_64-pc-linux-gnu-g++ -pthread -Os -pipe -march=native -frecord-gcc-switches -fPIC -I/usr/lib/python3.9/site-packages/numpy/core/include -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/ -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include -I/usr/include -I/usr/include -I/usr/include/stb -I/usr/include -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -I/usr/include/python3.9 -c mlpack/det.cpp -o build/temp.linux-x86_64-3.9/mlpack/det.o -DBINDING_TYPE=BINDING_TYPE_PYX -std=c++11 -fopenmp -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp
In file included from /usr/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h:1969,
from /usr/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h:12,
from /usr/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h:4,
from mlpack/det.cpp:635:
/usr/lib/python3.9/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
17 | #warning "Using deprecated NumPy API, disable it with " \
| ^~~~~~~
x86_64-pc-linux-gnu-g++ -pthread -shared -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 -Os -pipe -march=native -frecord-gcc-switches build/temp.linux-x86_64-3.9/mlpack/det.o -L/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib -L/usr/lib64 -o build/lib.linux-x86_64-3.9/mlpack/det.cpython-39-x86_64-linux-gnu.so -fopenmp /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib/libmlpack.so /usr/lib64/libarmadillo.so
[200/628] cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/methods/gmm && /usr/bin/cmake -DGENERATE_CPP_IN=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/python/generate_pyx.cpp.in -DGENERATE_CPP_OUT=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/generate_pyx_gmm_generate.cpp -DPROGRAM_MAIN_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/methods/gmm/gmm_generate_main.cpp -DPROGRAM_NAME=gmm_generate -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/ConfigureFile.cmake
[201/628] /usr/bin/x86_64-pc-linux-gnu-g++ -DARMA_NO_DEBUG -DHAS_OPENMP -DHAS_STB -DNDEBUG -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include/stb -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -DBINDING_TYPE=BINDING_TYPE_R -std=gnu++11 -MD -MT src/mlpack/methods/gmm/CMakeFiles/generate_r_gmm_train.dir/__/__/bindings/R/print_R.cpp.o -MF src/mlpack/methods/gmm/CMakeFiles/generate_r_gmm_train.dir/__/__/bindings/R/print_R.cpp.o.d -o src/mlpack/methods/gmm/CMakeFiles/generate_r_gmm_train.dir/__/__/bindings/R/print_R.cpp.o -c /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/R/print_R.cpp
[202/628] /usr/bin/x86_64-pc-linux-gnu-g++ -DARMA_NO_DEBUG -DHAS_OPENMP -DHAS_STB -DNDEBUG -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include/stb -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -DBINDING_TYPE=BINDING_TYPE_PYX -std=gnu++11 -MD -MT src/mlpack/methods/gmm/CMakeFiles/generate_pyx_gmm_probability.dir/__/__/bindings/python/print_pyx.cpp.o -MF src/mlpack/methods/gmm/CMakeFiles/generate_pyx_gmm_probability.dir/__/__/bindings/python/print_pyx.cpp.o.d -o src/mlpack/methods/gmm/CMakeFiles/generate_pyx_gmm_probability.dir/__/__/bindings/python/print_pyx.cpp.o -c /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/python/print_pyx.cpp
[203/628] : && /usr/bin/x86_64-pc-linux-gnu-g++ -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 src/mlpack/methods/hmm/CMakeFiles/mlpack_hmm_loglik.dir/hmm_loglik_main.cpp.o -o bin/mlpack_hmm_loglik -Wl,-rpath,/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib: lib/libmlpack.so.3.4 /usr/lib64/libarmadillo.so -lpthread /usr/lib/gcc/x86_64-pc-linux-gnu/11.2.0/libgomp.so /usr/lib64/libpthread.so && :
[204/628] cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python && /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/temp/python3.9/bin/python /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/setup.py build_ext --module=emst.pyx
running build_ext
cythoning mlpack/emst.pyx to mlpack/emst.cpp
/usr/lib/python3.9/site-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/mlpack/emst.pyx
tree = Parsing.p_module(s, pxd, full_module_name)
building 'mlpack.emst' extension
x86_64-pc-linux-gnu-g++ -pthread -Os -pipe -march=native -frecord-gcc-switches -fPIC -I/usr/lib/python3.9/site-packages/numpy/core/include -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/ -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include -I/usr/include -I/usr/include -I/usr/include/stb -I/usr/include -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -I/usr/include/python3.9 -c mlpack/emst.cpp -o build/temp.linux-x86_64-3.9/mlpack/emst.o -DBINDING_TYPE=BINDING_TYPE_PYX -std=c++11 -fopenmp -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp
In file included from /usr/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h:1969,
from /usr/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h:12,
from /usr/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h:4,
from mlpack/emst.cpp:635:
/usr/lib/python3.9/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
17 | #warning "Using deprecated NumPy API, disable it with " \
| ^~~~~~~
x86_64-pc-linux-gnu-g++ -pthread -shared -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 -Os -pipe -march=native -frecord-gcc-switches build/temp.linux-x86_64-3.9/mlpack/emst.o -L/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib -L/usr/lib64 -o build/lib.linux-x86_64-3.9/mlpack/emst.cpython-39-x86_64-linux-gnu.so -fopenmp /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib/libmlpack.so /usr/lib64/libarmadillo.so
[205/628] : && /usr/bin/x86_64-pc-linux-gnu-g++ -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 src/mlpack/methods/hmm/CMakeFiles/mlpack_hmm_train.dir/hmm_train_main.cpp.o -o bin/mlpack_hmm_train -Wl,-rpath,/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib: lib/libmlpack.so.3.4 /usr/lib64/libarmadillo.so -lpthread /usr/lib/gcc/x86_64-pc-linux-gnu/11.2.0/libgomp.so /usr/lib64/libpthread.so && :
[206/628] : && /usr/bin/x86_64-pc-linux-gnu-g++ -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 src/mlpack/methods/hmm/CMakeFiles/mlpack_hmm_generate.dir/hmm_generate_main.cpp.o -o bin/mlpack_hmm_generate -Wl,-rpath,/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib: lib/libmlpack.so.3.4 /usr/lib64/libarmadillo.so -lpthread /usr/lib/gcc/x86_64-pc-linux-gnu/11.2.0/libgomp.so /usr/lib64/libpthread.so && :
[207/628] cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/methods/hmm && /usr/bin/cmake -DGENERATE_CPP_IN=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/python/generate_pyx.cpp.in -DGENERATE_CPP_OUT=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/generate_pyx_hmm_generate.cpp -DPROGRAM_MAIN_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/methods/hmm/hmm_generate_main.cpp -DPROGRAM_NAME=hmm_generate -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/ConfigureFile.cmake
[208/628] : && /usr/bin/x86_64-pc-linux-gnu-g++ -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 src/mlpack/methods/hmm/CMakeFiles/mlpack_hmm_viterbi.dir/hmm_viterbi_main.cpp.o -o bin/mlpack_hmm_viterbi -Wl,-rpath,/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib: lib/libmlpack.so.3.4 /usr/lib64/libarmadillo.so -lpthread /usr/lib/gcc/x86_64-pc-linux-gnu/11.2.0/libgomp.so /usr/lib64/libpthread.so && :
[209/628] /usr/bin/x86_64-pc-linux-gnu-g++ -DARMA_NO_DEBUG -DHAS_OPENMP -DHAS_STB -DNDEBUG -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include/stb -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -DBINDING_TYPE=BINDING_TYPE_PYX -std=gnu++11 -MD -MT src/mlpack/methods/gmm/CMakeFiles/generate_pyx_gmm_train.dir/__/__/bindings/python/generate_pyx_gmm_train.cpp.o -MF src/mlpack/methods/gmm/CMakeFiles/generate_pyx_gmm_train.dir/__/__/bindings/python/generate_pyx_gmm_train.cpp.o.d -o src/mlpack/methods/gmm/CMakeFiles/generate_pyx_gmm_train.dir/__/__/bindings/python/generate_pyx_gmm_train.cpp.o -c /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/generate_pyx_gmm_train.cpp
[210/628] /usr/bin/x86_64-pc-linux-gnu-g++ -DARMA_NO_DEBUG -DHAS_OPENMP -DHAS_STB -DNDEBUG -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include/stb -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -DBINDING_TYPE=BINDING_TYPE_PYX -std=gnu++11 -MD -MT src/mlpack/methods/gmm/CMakeFiles/generate_pyx_gmm_probability.dir/__/__/bindings/python/generate_pyx_gmm_probability.cpp.o -MF src/mlpack/methods/gmm/CMakeFiles/generate_pyx_gmm_probability.dir/__/__/bindings/python/generate_pyx_gmm_probability.cpp.o.d -o src/mlpack/methods/gmm/CMakeFiles/generate_pyx_gmm_probability.dir/__/__/bindings/python/generate_pyx_gmm_probability.cpp.o -c /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/generate_pyx_gmm_probability.cpp
[211/628] /usr/bin/x86_64-pc-linux-gnu-g++ -DARMA_NO_DEBUG -DHAS_OPENMP -DHAS_STB -DNDEBUG -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include/stb -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -DBINDING_TYPE=BINDING_TYPE_R -std=gnu++11 -MD -MT src/mlpack/methods/gmm/CMakeFiles/generate_r_gmm_train.dir/__/__/bindings/R/build/generate_r_gmm_train.cpp.o -MF src/mlpack/methods/gmm/CMakeFiles/generate_r_gmm_train.dir/__/__/bindings/R/build/generate_r_gmm_train.cpp.o.d -o src/mlpack/methods/gmm/CMakeFiles/generate_r_gmm_train.dir/__/__/bindings/R/build/generate_r_gmm_train.cpp.o -c /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/build/generate_r_gmm_train.cpp
[212/628] : && /usr/bin/x86_64-pc-linux-gnu-g++ -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 src/mlpack/methods/gmm/CMakeFiles/generate_pyx_gmm_probability.dir/__/__/bindings/python/generate_pyx_gmm_probability.cpp.o src/mlpack/methods/gmm/CMakeFiles/generate_pyx_gmm_probability.dir/__/__/bindings/python/print_pyx.cpp.o -o bin/generate_pyx_gmm_probability -Wl,-rpath,/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib lib/libmlpack.so.3.4 /usr/lib64/libarmadillo.so /usr/lib/gcc/x86_64-pc-linux-gnu/11.2.0/libgomp.so /usr/lib64/libpthread.so && cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/methods/gmm && /usr/bin/cmake -DPROGRAM=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/bin/generate_pyx_gmm_probability -DOUTPUT_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/mlpack/gmm_probability.pyx -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/RunProgram.cmake
[213/628] : && /usr/bin/x86_64-pc-linux-gnu-g++ -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 src/mlpack/methods/gmm/CMakeFiles/generate_pyx_gmm_train.dir/__/__/bindings/python/generate_pyx_gmm_train.cpp.o src/mlpack/methods/gmm/CMakeFiles/generate_pyx_gmm_train.dir/__/__/bindings/python/print_pyx.cpp.o -o bin/generate_pyx_gmm_train -Wl,-rpath,/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib lib/libmlpack.so.3.4 /usr/lib64/libarmadillo.so /usr/lib/gcc/x86_64-pc-linux-gnu/11.2.0/libgomp.so /usr/lib64/libpthread.so && cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/methods/gmm && /usr/bin/cmake -DPROGRAM=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/bin/generate_pyx_gmm_train -DOUTPUT_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/mlpack/gmm_train.pyx -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/RunProgram.cmake
[214/628] : && /usr/bin/x86_64-pc-linux-gnu-g++ -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 src/mlpack/methods/gmm/CMakeFiles/generate_r_gmm_train.dir/__/__/bindings/R/build/generate_r_gmm_train.cpp.o src/mlpack/methods/gmm/CMakeFiles/generate_r_gmm_train.dir/__/__/bindings/R/print_R.cpp.o -o src/mlpack/bindings/R/build/bin/generate_r_gmm_train -Wl,-rpath,/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib lib/libmlpack.so.3.4 /usr/lib64/libarmadillo.so /usr/lib/gcc/x86_64-pc-linux-gnu/11.2.0/libgomp.so /usr/lib64/libpthread.so && cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/methods/gmm && /usr/bin/cmake -DGENERATE_BINDING_PROGRAM=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/build/bin/generate_r_gmm_train -DBINDING_OUTPUT_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/mlpack/R/gmm_train.R -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/GenerateBinding.cmake
[215/628] cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/methods/hmm && /usr/bin/cmake -DGENERATE_CPP_IN=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/python/generate_pyx.cpp.in -DGENERATE_CPP_OUT=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/generate_pyx_hmm_train.cpp -DPROGRAM_MAIN_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/methods/hmm/hmm_train_main.cpp -DPROGRAM_NAME=hmm_train -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/ConfigureFile.cmake
[216/628] /usr/bin/x86_64-pc-linux-gnu-g++ -DARMA_NO_DEBUG -DHAS_OPENMP -DHAS_STB -DNDEBUG -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include/stb -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -DBINDING_TYPE=BINDING_TYPE_R -std=gnu++11 -MD -MT src/mlpack/methods/gmm/CMakeFiles/generate_r_gmm_probability.dir/__/__/bindings/R/print_R.cpp.o -MF src/mlpack/methods/gmm/CMakeFiles/generate_r_gmm_probability.dir/__/__/bindings/R/print_R.cpp.o.d -o src/mlpack/methods/gmm/CMakeFiles/generate_r_gmm_probability.dir/__/__/bindings/R/print_R.cpp.o -c /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/R/print_R.cpp
[217/628] cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python && /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/temp/python3.9/bin/python /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/setup.py build_ext --module=dbscan.pyx
running build_ext
cythoning mlpack/dbscan.pyx to mlpack/dbscan.cpp
/usr/lib/python3.9/site-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/mlpack/dbscan.pyx
tree = Parsing.p_module(s, pxd, full_module_name)
building 'mlpack.dbscan' extension
x86_64-pc-linux-gnu-g++ -pthread -Os -pipe -march=native -frecord-gcc-switches -fPIC -I/usr/lib/python3.9/site-packages/numpy/core/include -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/ -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include -I/usr/include -I/usr/include -I/usr/include/stb -I/usr/include -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -I/usr/include/python3.9 -c mlpack/dbscan.cpp -o build/temp.linux-x86_64-3.9/mlpack/dbscan.o -DBINDING_TYPE=BINDING_TYPE_PYX -std=c++11 -fopenmp -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp
In file included from /usr/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h:1969,
from /usr/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h:12,
from /usr/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h:4,
from mlpack/dbscan.cpp:635:
/usr/lib/python3.9/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
17 | #warning "Using deprecated NumPy API, disable it with " \
| ^~~~~~~
x86_64-pc-linux-gnu-g++ -pthread -shared -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 -Os -pipe -march=native -frecord-gcc-switches build/temp.linux-x86_64-3.9/mlpack/dbscan.o -L/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib -L/usr/lib64 -o build/lib.linux-x86_64-3.9/mlpack/dbscan.cpython-39-x86_64-linux-gnu.so -fopenmp /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib/libmlpack.so /usr/lib64/libarmadillo.so
[218/628] /usr/bin/x86_64-pc-linux-gnu-g++ -DARMA_NO_DEBUG -DHAS_OPENMP -DHAS_STB -DNDEBUG -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include/stb -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -DBINDING_TYPE=BINDING_TYPE_R -std=gnu++11 -MD -MT src/mlpack/methods/gmm/CMakeFiles/generate_r_gmm_probability.dir/__/__/bindings/R/build/generate_r_gmm_probability.cpp.o -MF src/mlpack/methods/gmm/CMakeFiles/generate_r_gmm_probability.dir/__/__/bindings/R/build/generate_r_gmm_probability.cpp.o.d -o src/mlpack/methods/gmm/CMakeFiles/generate_r_gmm_probability.dir/__/__/bindings/R/build/generate_r_gmm_probability.cpp.o -c /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/build/generate_r_gmm_probability.cpp
[219/628] /usr/bin/x86_64-pc-linux-gnu-g++ -DARMA_NO_DEBUG -DHAS_OPENMP -DHAS_STB -DNDEBUG -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include/stb -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -DBINDING_TYPE=BINDING_TYPE_PYX -std=gnu++11 -MD -MT src/mlpack/methods/gmm/CMakeFiles/generate_pyx_gmm_generate.dir/__/__/bindings/python/generate_pyx_gmm_generate.cpp.o -MF src/mlpack/methods/gmm/CMakeFiles/generate_pyx_gmm_generate.dir/__/__/bindings/python/generate_pyx_gmm_generate.cpp.o.d -o src/mlpack/methods/gmm/CMakeFiles/generate_pyx_gmm_generate.dir/__/__/bindings/python/generate_pyx_gmm_generate.cpp.o -c /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/generate_pyx_gmm_generate.cpp
[220/628] /usr/bin/x86_64-pc-linux-gnu-g++ -DARMA_NO_DEBUG -DHAS_OPENMP -DHAS_STB -DNDEBUG -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include/stb -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -DBINDING_TYPE=BINDING_TYPE_PYX -std=gnu++11 -MD -MT src/mlpack/methods/gmm/CMakeFiles/generate_pyx_gmm_generate.dir/__/__/bindings/python/print_pyx.cpp.o -MF src/mlpack/methods/gmm/CMakeFiles/generate_pyx_gmm_generate.dir/__/__/bindings/python/print_pyx.cpp.o.d -o src/mlpack/methods/gmm/CMakeFiles/generate_pyx_gmm_generate.dir/__/__/bindings/python/print_pyx.cpp.o -c /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/python/print_pyx.cpp
[221/628] /usr/bin/x86_64-pc-linux-gnu-g++ -DARMA_NO_DEBUG -DHAS_OPENMP -DHAS_STB -DNDEBUG -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include/stb -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -DBINDING_TYPE=BINDING_TYPE_PYX -std=gnu++11 -MD -MT src/mlpack/methods/hmm/CMakeFiles/generate_pyx_hmm_generate.dir/__/__/bindings/python/print_pyx.cpp.o -MF src/mlpack/methods/hmm/CMakeFiles/generate_pyx_hmm_generate.dir/__/__/bindings/python/print_pyx.cpp.o.d -o src/mlpack/methods/hmm/CMakeFiles/generate_pyx_hmm_generate.dir/__/__/bindings/python/print_pyx.cpp.o -c /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/python/print_pyx.cpp
[222/628] /usr/bin/x86_64-pc-linux-gnu-g++ -DARMA_NO_DEBUG -DHAS_OPENMP -DHAS_STB -DNDEBUG -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include/stb -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -DBINDING_TYPE=BINDING_TYPE_PYX -std=gnu++11 -MD -MT src/mlpack/methods/hmm/CMakeFiles/generate_pyx_hmm_generate.dir/__/__/bindings/python/generate_pyx_hmm_generate.cpp.o -MF src/mlpack/methods/hmm/CMakeFiles/generate_pyx_hmm_generate.dir/__/__/bindings/python/generate_pyx_hmm_generate.cpp.o.d -o src/mlpack/methods/hmm/CMakeFiles/generate_pyx_hmm_generate.dir/__/__/bindings/python/generate_pyx_hmm_generate.cpp.o -c /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/generate_pyx_hmm_generate.cpp
[223/628] cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/methods/hmm && /usr/bin/cmake -DGENERATE_CPP_IN=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/python/generate_pyx.cpp.in -DGENERATE_CPP_OUT=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/generate_pyx_hmm_loglik.cpp -DPROGRAM_MAIN_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/methods/hmm/hmm_loglik_main.cpp -DPROGRAM_NAME=hmm_loglik -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/ConfigureFile.cmake
[224/628] cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/methods/hmm && /usr/bin/cmake -DMODEL_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/mlpack/model.txt -DPROGRAM_NAME=hmm_train -DPROGRAM_MAIN_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/methods/hmm/hmm_train_main.cpp -DSOURCE_DIR=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1 -DR_CPP_IN=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/R/r_method.cpp.in -DR_CPP_OUT=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/mlpack/src/hmm_train.cpp -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/R/ConfigureRCPP.cmake
[225/628] cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/methods/hmm && /usr/bin/cmake -DMODEL_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/mlpack/model.txt -DPROGRAM_NAME=hmm_viterbi -DPROGRAM_MAIN_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/methods/hmm/hmm_viterbi_main.cpp -DSOURCE_DIR=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1 -DR_CPP_IN=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/R/r_method.cpp.in -DR_CPP_OUT=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/mlpack/src/hmm_viterbi.cpp -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/R/ConfigureRCPP.cmake
[226/628] cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/methods/hmm && /usr/bin/cmake -DNAME=hmm_train -DGENERATE_CPP_IN=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/R/generate_R.cpp.in -DGENERATE_CPP_OUT=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/build/generate_r_hmm_train.cpp -DPROGRAM_MAIN_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/methods/hmm/hmm_train_main.cpp -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/ConfigureFile.cmake
[227/628] : && /usr/bin/x86_64-pc-linux-gnu-g++ -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 src/mlpack/methods/gmm/CMakeFiles/generate_r_gmm_probability.dir/__/__/bindings/R/build/generate_r_gmm_probability.cpp.o src/mlpack/methods/gmm/CMakeFiles/generate_r_gmm_probability.dir/__/__/bindings/R/print_R.cpp.o -o src/mlpack/bindings/R/build/bin/generate_r_gmm_probability -Wl,-rpath,/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib lib/libmlpack.so.3.4 /usr/lib64/libarmadillo.so /usr/lib/gcc/x86_64-pc-linux-gnu/11.2.0/libgomp.so /usr/lib64/libpthread.so && cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/methods/gmm && /usr/bin/cmake -DGENERATE_BINDING_PROGRAM=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/build/bin/generate_r_gmm_probability -DBINDING_OUTPUT_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/mlpack/R/gmm_probability.R -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/GenerateBinding.cmake
[228/628] : && /usr/bin/x86_64-pc-linux-gnu-g++ -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 src/mlpack/methods/gmm/CMakeFiles/generate_pyx_gmm_generate.dir/__/__/bindings/python/generate_pyx_gmm_generate.cpp.o src/mlpack/methods/gmm/CMakeFiles/generate_pyx_gmm_generate.dir/__/__/bindings/python/print_pyx.cpp.o -o bin/generate_pyx_gmm_generate -Wl,-rpath,/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib lib/libmlpack.so.3.4 /usr/lib64/libarmadillo.so /usr/lib/gcc/x86_64-pc-linux-gnu/11.2.0/libgomp.so /usr/lib64/libpthread.so && cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/methods/gmm && /usr/bin/cmake -DPROGRAM=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/bin/generate_pyx_gmm_generate -DOUTPUT_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/mlpack/gmm_generate.pyx -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/RunProgram.cmake
[229/628] : && /usr/bin/x86_64-pc-linux-gnu-g++ -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 src/mlpack/methods/hmm/CMakeFiles/generate_pyx_hmm_generate.dir/__/__/bindings/python/generate_pyx_hmm_generate.cpp.o src/mlpack/methods/hmm/CMakeFiles/generate_pyx_hmm_generate.dir/__/__/bindings/python/print_pyx.cpp.o -o bin/generate_pyx_hmm_generate -Wl,-rpath,/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib lib/libmlpack.so.3.4 /usr/lib64/libarmadillo.so /usr/lib/gcc/x86_64-pc-linux-gnu/11.2.0/libgomp.so /usr/lib64/libpthread.so && cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/methods/hmm && /usr/bin/cmake -DPROGRAM=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/bin/generate_pyx_hmm_generate -DOUTPUT_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/mlpack/hmm_generate.pyx -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/RunProgram.cmake
[230/628] cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python && /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/temp/python3.9/bin/python /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/setup.py build_ext --module=gmm_probability.pyx
running build_ext
cythoning mlpack/gmm_probability.pyx to mlpack/gmm_probability.cpp
/usr/lib/python3.9/site-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/mlpack/gmm_probability.pyx
tree = Parsing.p_module(s, pxd, full_module_name)
building 'mlpack.gmm_probability' extension
x86_64-pc-linux-gnu-g++ -pthread -Os -pipe -march=native -frecord-gcc-switches -fPIC -I/usr/lib/python3.9/site-packages/numpy/core/include -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/ -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include -I/usr/include -I/usr/include -I/usr/include/stb -I/usr/include -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -I/usr/include/python3.9 -c mlpack/gmm_probability.cpp -o build/temp.linux-x86_64-3.9/mlpack/gmm_probability.o -DBINDING_TYPE=BINDING_TYPE_PYX -std=c++11 -fopenmp -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp
In file included from /usr/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h:1969,
from /usr/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h:12,
from /usr/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h:4,
from mlpack/gmm_probability.cpp:635:
/usr/lib/python3.9/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
17 | #warning "Using deprecated NumPy API, disable it with " \
| ^~~~~~~
x86_64-pc-linux-gnu-g++ -pthread -shared -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 -Os -pipe -march=native -frecord-gcc-switches build/temp.linux-x86_64-3.9/mlpack/gmm_probability.o -L/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib -L/usr/lib64 -o build/lib.linux-x86_64-3.9/mlpack/gmm_probability.cpython-39-x86_64-linux-gnu.so -fopenmp /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib/libmlpack.so /usr/lib64/libarmadillo.so
[231/628] /usr/bin/x86_64-pc-linux-gnu-g++ -DARMA_NO_DEBUG -DHAS_OPENMP -DHAS_STB -DNDEBUG -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include/stb -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -DBINDING_TYPE=BINDING_TYPE_PYX -std=gnu++11 -MD -MT src/mlpack/methods/hmm/CMakeFiles/generate_pyx_hmm_train.dir/__/__/bindings/python/generate_pyx_hmm_train.cpp.o -MF src/mlpack/methods/hmm/CMakeFiles/generate_pyx_hmm_train.dir/__/__/bindings/python/generate_pyx_hmm_train.cpp.o.d -o src/mlpack/methods/hmm/CMakeFiles/generate_pyx_hmm_train.dir/__/__/bindings/python/generate_pyx_hmm_train.cpp.o -c /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/generate_pyx_hmm_train.cpp
[232/628] /usr/bin/x86_64-pc-linux-gnu-g++ -DARMA_NO_DEBUG -DHAS_OPENMP -DHAS_STB -DNDEBUG -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include/stb -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -DBINDING_TYPE=BINDING_TYPE_PYX -std=gnu++11 -MD -MT src/mlpack/methods/hmm/CMakeFiles/generate_pyx_hmm_loglik.dir/__/__/bindings/python/print_pyx.cpp.o -MF src/mlpack/methods/hmm/CMakeFiles/generate_pyx_hmm_loglik.dir/__/__/bindings/python/print_pyx.cpp.o.d -o src/mlpack/methods/hmm/CMakeFiles/generate_pyx_hmm_loglik.dir/__/__/bindings/python/print_pyx.cpp.o -c /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/python/print_pyx.cpp
[233/628] /usr/bin/x86_64-pc-linux-gnu-g++ -DARMA_NO_DEBUG -DHAS_OPENMP -DHAS_STB -DNDEBUG -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include/stb -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -DBINDING_TYPE=BINDING_TYPE_R -std=gnu++11 -MD -MT src/mlpack/methods/hmm/CMakeFiles/generate_r_hmm_train.dir/__/__/bindings/R/print_R.cpp.o -MF src/mlpack/methods/hmm/CMakeFiles/generate_r_hmm_train.dir/__/__/bindings/R/print_R.cpp.o.d -o src/mlpack/methods/hmm/CMakeFiles/generate_r_hmm_train.dir/__/__/bindings/R/print_R.cpp.o -c /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/R/print_R.cpp
[234/628] /usr/bin/x86_64-pc-linux-gnu-g++ -DARMA_NO_DEBUG -DHAS_OPENMP -DHAS_STB -DNDEBUG -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include/stb -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -DBINDING_TYPE=BINDING_TYPE_PYX -std=gnu++11 -MD -MT src/mlpack/methods/hmm/CMakeFiles/generate_pyx_hmm_train.dir/__/__/bindings/python/print_pyx.cpp.o -MF src/mlpack/methods/hmm/CMakeFiles/generate_pyx_hmm_train.dir/__/__/bindings/python/print_pyx.cpp.o.d -o src/mlpack/methods/hmm/CMakeFiles/generate_pyx_hmm_train.dir/__/__/bindings/python/print_pyx.cpp.o -c /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/python/print_pyx.cpp
[235/628] /usr/bin/x86_64-pc-linux-gnu-g++ -DARMA_NO_DEBUG -DHAS_OPENMP -DHAS_STB -DNDEBUG -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include/stb -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -DBINDING_TYPE=BINDING_TYPE_PYX -std=gnu++11 -MD -MT src/mlpack/methods/hmm/CMakeFiles/generate_pyx_hmm_loglik.dir/__/__/bindings/python/generate_pyx_hmm_loglik.cpp.o -MF src/mlpack/methods/hmm/CMakeFiles/generate_pyx_hmm_loglik.dir/__/__/bindings/python/generate_pyx_hmm_loglik.cpp.o.d -o src/mlpack/methods/hmm/CMakeFiles/generate_pyx_hmm_loglik.dir/__/__/bindings/python/generate_pyx_hmm_loglik.cpp.o -c /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/generate_pyx_hmm_loglik.cpp
[236/628] cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/methods/hmm && /usr/bin/cmake -DGENERATE_CPP_IN=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/python/generate_pyx.cpp.in -DGENERATE_CPP_OUT=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/generate_pyx_hmm_viterbi.cpp -DPROGRAM_MAIN_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/methods/hmm/hmm_viterbi_main.cpp -DPROGRAM_NAME=hmm_viterbi -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/ConfigureFile.cmake
[237/628] cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/methods/hmm && /usr/bin/cmake -DNAME=hmm_viterbi -DGENERATE_CPP_IN=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/R/generate_R.cpp.in -DGENERATE_CPP_OUT=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/build/generate_r_hmm_viterbi.cpp -DPROGRAM_MAIN_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/methods/hmm/hmm_viterbi_main.cpp -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/ConfigureFile.cmake
[238/628] cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/methods/hmm && /usr/bin/cmake -DMODEL_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/mlpack/model.txt -DPROGRAM_NAME=hmm_generate -DPROGRAM_MAIN_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/methods/hmm/hmm_generate_main.cpp -DSOURCE_DIR=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1 -DR_CPP_IN=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/R/r_method.cpp.in -DR_CPP_OUT=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/mlpack/src/hmm_generate.cpp -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/R/ConfigureRCPP.cmake
[239/628] cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/methods/hmm && /usr/bin/cmake -DMODEL_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/mlpack/model.txt -DPROGRAM_NAME=hmm_loglik -DPROGRAM_MAIN_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/methods/hmm/hmm_loglik_main.cpp -DSOURCE_DIR=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1 -DR_CPP_IN=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/R/r_method.cpp.in -DR_CPP_OUT=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/mlpack/src/hmm_loglik.cpp -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/R/ConfigureRCPP.cmake
[240/628] cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python && /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/temp/python3.9/bin/python /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/setup.py build_ext --module=gmm_train.pyx
running build_ext
cythoning mlpack/gmm_train.pyx to mlpack/gmm_train.cpp
/usr/lib/python3.9/site-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/mlpack/gmm_train.pyx
tree = Parsing.p_module(s, pxd, full_module_name)
building 'mlpack.gmm_train' extension
x86_64-pc-linux-gnu-g++ -pthread -Os -pipe -march=native -frecord-gcc-switches -fPIC -I/usr/lib/python3.9/site-packages/numpy/core/include -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/ -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include -I/usr/include -I/usr/include -I/usr/include/stb -I/usr/include -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -I/usr/include/python3.9 -c mlpack/gmm_train.cpp -o build/temp.linux-x86_64-3.9/mlpack/gmm_train.o -DBINDING_TYPE=BINDING_TYPE_PYX -std=c++11 -fopenmp -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp
In file included from /usr/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h:1969,
from /usr/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h:12,
from /usr/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h:4,
from mlpack/gmm_train.cpp:635:
/usr/lib/python3.9/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
17 | #warning "Using deprecated NumPy API, disable it with " \
| ^~~~~~~
x86_64-pc-linux-gnu-g++ -pthread -shared -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 -Os -pipe -march=native -frecord-gcc-switches build/temp.linux-x86_64-3.9/mlpack/gmm_train.o -L/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib -L/usr/lib64 -o build/lib.linux-x86_64-3.9/mlpack/gmm_train.cpython-39-x86_64-linux-gnu.so -fopenmp /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib/libmlpack.so /usr/lib64/libarmadillo.so
[241/628] cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/methods/hmm && /usr/bin/cmake -DNAME=hmm_generate -DGENERATE_CPP_IN=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/R/generate_R.cpp.in -DGENERATE_CPP_OUT=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/build/generate_r_hmm_generate.cpp -DPROGRAM_MAIN_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/methods/hmm/hmm_generate_main.cpp -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/ConfigureFile.cmake
[242/628] : && /usr/bin/x86_64-pc-linux-gnu-g++ -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 src/mlpack/methods/hmm/CMakeFiles/generate_pyx_hmm_loglik.dir/__/__/bindings/python/generate_pyx_hmm_loglik.cpp.o src/mlpack/methods/hmm/CMakeFiles/generate_pyx_hmm_loglik.dir/__/__/bindings/python/print_pyx.cpp.o -o bin/generate_pyx_hmm_loglik -Wl,-rpath,/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib lib/libmlpack.so.3.4 /usr/lib64/libarmadillo.so /usr/lib/gcc/x86_64-pc-linux-gnu/11.2.0/libgomp.so /usr/lib64/libpthread.so && cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/methods/hmm && /usr/bin/cmake -DPROGRAM=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/bin/generate_pyx_hmm_loglik -DOUTPUT_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/mlpack/hmm_loglik.pyx -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/RunProgram.cmake
[243/628] : && /usr/bin/x86_64-pc-linux-gnu-g++ -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 src/mlpack/methods/hmm/CMakeFiles/generate_pyx_hmm_train.dir/__/__/bindings/python/generate_pyx_hmm_train.cpp.o src/mlpack/methods/hmm/CMakeFiles/generate_pyx_hmm_train.dir/__/__/bindings/python/print_pyx.cpp.o -o bin/generate_pyx_hmm_train -Wl,-rpath,/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib lib/libmlpack.so.3.4 /usr/lib64/libarmadillo.so /usr/lib/gcc/x86_64-pc-linux-gnu/11.2.0/libgomp.so /usr/lib64/libpthread.so && cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/methods/hmm && /usr/bin/cmake -DPROGRAM=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/bin/generate_pyx_hmm_train -DOUTPUT_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/mlpack/hmm_train.pyx -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/RunProgram.cmake
[244/628] cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python && /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/temp/python3.9/bin/python /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/setup.py build_ext --module=fastmks.pyx
running build_ext
cythoning mlpack/fastmks.pyx to mlpack/fastmks.cpp
/usr/lib/python3.9/site-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/mlpack/fastmks.pyx
tree = Parsing.p_module(s, pxd, full_module_name)
building 'mlpack.fastmks' extension
x86_64-pc-linux-gnu-g++ -pthread -Os -pipe -march=native -frecord-gcc-switches -fPIC -I/usr/lib/python3.9/site-packages/numpy/core/include -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/ -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include -I/usr/include -I/usr/include -I/usr/include/stb -I/usr/include -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -I/usr/include/python3.9 -c mlpack/fastmks.cpp -o build/temp.linux-x86_64-3.9/mlpack/fastmks.o -DBINDING_TYPE=BINDING_TYPE_PYX -std=c++11 -fopenmp -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp
In file included from /usr/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h:1969,
from /usr/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h:12,
from /usr/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h:4,
from mlpack/fastmks.cpp:635:
/usr/lib/python3.9/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
17 | #warning "Using deprecated NumPy API, disable it with " \
| ^~~~~~~
x86_64-pc-linux-gnu-g++ -pthread -shared -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 -Os -pipe -march=native -frecord-gcc-switches build/temp.linux-x86_64-3.9/mlpack/fastmks.o -L/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib -L/usr/lib64 -o build/lib.linux-x86_64-3.9/mlpack/fastmks.cpython-39-x86_64-linux-gnu.so -fopenmp /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib/libmlpack.so /usr/lib64/libarmadillo.so
[245/628] cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python && /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/temp/python3.9/bin/python /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/setup.py build_ext --module=gmm_generate.pyx
running build_ext
cythoning mlpack/gmm_generate.pyx to mlpack/gmm_generate.cpp
/usr/lib/python3.9/site-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/mlpack/gmm_generate.pyx
tree = Parsing.p_module(s, pxd, full_module_name)
building 'mlpack.gmm_generate' extension
x86_64-pc-linux-gnu-g++ -pthread -Os -pipe -march=native -frecord-gcc-switches -fPIC -I/usr/lib/python3.9/site-packages/numpy/core/include -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/ -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include -I/usr/include -I/usr/include -I/usr/include/stb -I/usr/include -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -I/usr/include/python3.9 -c mlpack/gmm_generate.cpp -o build/temp.linux-x86_64-3.9/mlpack/gmm_generate.o -DBINDING_TYPE=BINDING_TYPE_PYX -std=c++11 -fopenmp -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp
In file included from /usr/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h:1969,
from /usr/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h:12,
from /usr/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h:4,
from mlpack/gmm_generate.cpp:635:
/usr/lib/python3.9/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
17 | #warning "Using deprecated NumPy API, disable it with " \
| ^~~~~~~
x86_64-pc-linux-gnu-g++ -pthread -shared -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 -Os -pipe -march=native -frecord-gcc-switches build/temp.linux-x86_64-3.9/mlpack/gmm_generate.o -L/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib -L/usr/lib64 -o build/lib.linux-x86_64-3.9/mlpack/gmm_generate.cpython-39-x86_64-linux-gnu.so -fopenmp /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib/libmlpack.so /usr/lib64/libarmadillo.so
[246/628] cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/methods/hmm && /usr/bin/cmake -DNAME=hmm_loglik -DGENERATE_CPP_IN=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/R/generate_R.cpp.in -DGENERATE_CPP_OUT=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/build/generate_r_hmm_loglik.cpp -DPROGRAM_MAIN_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/methods/hmm/hmm_loglik_main.cpp -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/ConfigureFile.cmake
[247/628] /usr/bin/x86_64-pc-linux-gnu-g++ -DARMA_NO_DEBUG -DHAS_OPENMP -DHAS_STB -DNDEBUG -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include/stb -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -DBINDING_TYPE=BINDING_TYPE_R -std=gnu++11 -MD -MT src/mlpack/methods/hmm/CMakeFiles/generate_r_hmm_train.dir/__/__/bindings/R/build/generate_r_hmm_train.cpp.o -MF src/mlpack/methods/hmm/CMakeFiles/generate_r_hmm_train.dir/__/__/bindings/R/build/generate_r_hmm_train.cpp.o.d -o src/mlpack/methods/hmm/CMakeFiles/generate_r_hmm_train.dir/__/__/bindings/R/build/generate_r_hmm_train.cpp.o -c /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/build/generate_r_hmm_train.cpp
[248/628] : && /usr/bin/x86_64-pc-linux-gnu-g++ -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 src/mlpack/methods/hmm/CMakeFiles/generate_r_hmm_train.dir/__/__/bindings/R/build/generate_r_hmm_train.cpp.o src/mlpack/methods/hmm/CMakeFiles/generate_r_hmm_train.dir/__/__/bindings/R/print_R.cpp.o -o src/mlpack/bindings/R/build/bin/generate_r_hmm_train -Wl,-rpath,/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib lib/libmlpack.so.3.4 /usr/lib64/libarmadillo.so /usr/lib/gcc/x86_64-pc-linux-gnu/11.2.0/libgomp.so /usr/lib64/libpthread.so && cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/methods/hmm && /usr/bin/cmake -DGENERATE_BINDING_PROGRAM=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/build/bin/generate_r_hmm_train -DBINDING_OUTPUT_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/mlpack/R/hmm_train.R -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/GenerateBinding.cmake
[249/628] /usr/bin/x86_64-pc-linux-gnu-g++ -DARMA_NO_DEBUG -DHAS_OPENMP -DHAS_STB -DNDEBUG -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include/stb -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -DBINDING_TYPE=BINDING_TYPE_R -std=gnu++11 -MD -MT src/mlpack/methods/hmm/CMakeFiles/generate_r_hmm_viterbi.dir/__/__/bindings/R/print_R.cpp.o -MF src/mlpack/methods/hmm/CMakeFiles/generate_r_hmm_viterbi.dir/__/__/bindings/R/print_R.cpp.o.d -o src/mlpack/methods/hmm/CMakeFiles/generate_r_hmm_viterbi.dir/__/__/bindings/R/print_R.cpp.o -c /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/R/print_R.cpp
[250/628] /usr/bin/x86_64-pc-linux-gnu-g++ -DARMA_NO_DEBUG -DHAS_OPENMP -DHAS_STB -DNDEBUG -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include/stb -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -DBINDING_TYPE=BINDING_TYPE_R -std=gnu++11 -MD -MT src/mlpack/methods/hmm/CMakeFiles/generate_r_hmm_generate.dir/__/__/bindings/R/print_R.cpp.o -MF src/mlpack/methods/hmm/CMakeFiles/generate_r_hmm_generate.dir/__/__/bindings/R/print_R.cpp.o.d -o src/mlpack/methods/hmm/CMakeFiles/generate_r_hmm_generate.dir/__/__/bindings/R/print_R.cpp.o -c /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/R/print_R.cpp
[251/628] cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/methods/hoeffding_trees && /usr/bin/cmake -DMODEL_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/mlpack/model.txt -DPROGRAM_NAME=hoeffding_tree -DPROGRAM_MAIN_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/methods/hoeffding_trees/hoeffding_tree_main.cpp -DSOURCE_DIR=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1 -DR_CPP_IN=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/R/r_method.cpp.in -DR_CPP_OUT=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/mlpack/src/hoeffding_tree.cpp -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/R/ConfigureRCPP.cmake
[252/628] cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/methods/hoeffding_trees && /usr/bin/cmake -DNAME=hoeffding_tree -DGENERATE_CPP_IN=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/R/generate_R.cpp.in -DGENERATE_CPP_OUT=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/build/generate_r_hoeffding_tree.cpp -DPROGRAM_MAIN_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/methods/hoeffding_trees/hoeffding_tree_main.cpp -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/ConfigureFile.cmake
[253/628] : && /usr/bin/x86_64-pc-linux-gnu-g++ -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 src/mlpack/methods/hoeffding_trees/CMakeFiles/mlpack_hoeffding_tree.dir/hoeffding_tree_main.cpp.o -o bin/mlpack_hoeffding_tree -Wl,-rpath,/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib: lib/libmlpack.so.3.4 /usr/lib64/libarmadillo.so -lpthread /usr/lib/gcc/x86_64-pc-linux-gnu/11.2.0/libgomp.so /usr/lib64/libpthread.so && :
[254/628] /usr/bin/x86_64-pc-linux-gnu-g++ -DARMA_NO_DEBUG -DHAS_OPENMP -DHAS_STB -DNDEBUG -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include/stb -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -DBINDING_TYPE=BINDING_TYPE_PYX -std=gnu++11 -MD -MT src/mlpack/methods/hmm/CMakeFiles/generate_pyx_hmm_viterbi.dir/__/__/bindings/python/print_pyx.cpp.o -MF src/mlpack/methods/hmm/CMakeFiles/generate_pyx_hmm_viterbi.dir/__/__/bindings/python/print_pyx.cpp.o.d -o src/mlpack/methods/hmm/CMakeFiles/generate_pyx_hmm_viterbi.dir/__/__/bindings/python/print_pyx.cpp.o -c /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/python/print_pyx.cpp
[255/628] cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/methods/hoeffding_trees && /usr/bin/cmake -DGENERATE_CPP_IN=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/python/generate_pyx.cpp.in -DGENERATE_CPP_OUT=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/generate_pyx_hoeffding_tree.cpp -DPROGRAM_MAIN_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/methods/hoeffding_trees/hoeffding_tree_main.cpp -DPROGRAM_NAME=hoeffding_tree -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/ConfigureFile.cmake
[256/628] cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python && /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/temp/python3.9/bin/python /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/setup.py build_ext --module=hmm_generate.pyx
running build_ext
cythoning mlpack/hmm_generate.pyx to mlpack/hmm_generate.cpp
/usr/lib/python3.9/site-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/mlpack/hmm_generate.pyx
tree = Parsing.p_module(s, pxd, full_module_name)
building 'mlpack.hmm_generate' extension
x86_64-pc-linux-gnu-g++ -pthread -Os -pipe -march=native -frecord-gcc-switches -fPIC -I/usr/lib/python3.9/site-packages/numpy/core/include -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/ -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include -I/usr/include -I/usr/include -I/usr/include/stb -I/usr/include -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -I/usr/include/python3.9 -c mlpack/hmm_generate.cpp -o build/temp.linux-x86_64-3.9/mlpack/hmm_generate.o -DBINDING_TYPE=BINDING_TYPE_PYX -std=c++11 -fopenmp -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp
In file included from /usr/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h:1969,
from /usr/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h:12,
from /usr/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h:4,
from mlpack/hmm_generate.cpp:635:
/usr/lib/python3.9/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
17 | #warning "Using deprecated NumPy API, disable it with " \
| ^~~~~~~
x86_64-pc-linux-gnu-g++ -pthread -shared -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 -Os -pipe -march=native -frecord-gcc-switches build/temp.linux-x86_64-3.9/mlpack/hmm_generate.o -L/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib -L/usr/lib64 -o build/lib.linux-x86_64-3.9/mlpack/hmm_generate.cpython-39-x86_64-linux-gnu.so -fopenmp /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib/libmlpack.so /usr/lib64/libarmadillo.so
[257/628] /usr/bin/x86_64-pc-linux-gnu-g++ -DARMA_NO_DEBUG -DHAS_OPENMP -DHAS_STB -DNDEBUG -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include/stb -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -DBINDING_TYPE=BINDING_TYPE_R -std=gnu++11 -MD -MT src/mlpack/methods/hmm/CMakeFiles/generate_r_hmm_viterbi.dir/__/__/bindings/R/build/generate_r_hmm_viterbi.cpp.o -MF src/mlpack/methods/hmm/CMakeFiles/generate_r_hmm_viterbi.dir/__/__/bindings/R/build/generate_r_hmm_viterbi.cpp.o.d -o src/mlpack/methods/hmm/CMakeFiles/generate_r_hmm_viterbi.dir/__/__/bindings/R/build/generate_r_hmm_viterbi.cpp.o -c /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/build/generate_r_hmm_viterbi.cpp
[258/628] /usr/bin/x86_64-pc-linux-gnu-g++ -DARMA_NO_DEBUG -DHAS_OPENMP -DHAS_STB -DNDEBUG -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include/stb -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -DBINDING_TYPE=BINDING_TYPE_R -std=gnu++11 -MD -MT src/mlpack/methods/hmm/CMakeFiles/generate_r_hmm_generate.dir/__/__/bindings/R/build/generate_r_hmm_generate.cpp.o -MF src/mlpack/methods/hmm/CMakeFiles/generate_r_hmm_generate.dir/__/__/bindings/R/build/generate_r_hmm_generate.cpp.o.d -o src/mlpack/methods/hmm/CMakeFiles/generate_r_hmm_generate.dir/__/__/bindings/R/build/generate_r_hmm_generate.cpp.o -c /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/build/generate_r_hmm_generate.cpp
[259/628] : && /usr/bin/x86_64-pc-linux-gnu-g++ -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 src/mlpack/methods/hmm/CMakeFiles/generate_r_hmm_viterbi.dir/__/__/bindings/R/build/generate_r_hmm_viterbi.cpp.o src/mlpack/methods/hmm/CMakeFiles/generate_r_hmm_viterbi.dir/__/__/bindings/R/print_R.cpp.o -o src/mlpack/bindings/R/build/bin/generate_r_hmm_viterbi -Wl,-rpath,/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib lib/libmlpack.so.3.4 /usr/lib64/libarmadillo.so /usr/lib/gcc/x86_64-pc-linux-gnu/11.2.0/libgomp.so /usr/lib64/libpthread.so && cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/methods/hmm && /usr/bin/cmake -DGENERATE_BINDING_PROGRAM=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/build/bin/generate_r_hmm_viterbi -DBINDING_OUTPUT_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/mlpack/R/hmm_viterbi.R -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/GenerateBinding.cmake
[260/628] /usr/bin/x86_64-pc-linux-gnu-g++ -DARMA_NO_DEBUG -DHAS_OPENMP -DHAS_STB -DNDEBUG -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include/stb -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -DBINDING_TYPE=BINDING_TYPE_PYX -std=gnu++11 -MD -MT src/mlpack/methods/hmm/CMakeFiles/generate_pyx_hmm_viterbi.dir/__/__/bindings/python/generate_pyx_hmm_viterbi.cpp.o -MF src/mlpack/methods/hmm/CMakeFiles/generate_pyx_hmm_viterbi.dir/__/__/bindings/python/generate_pyx_hmm_viterbi.cpp.o.d -o src/mlpack/methods/hmm/CMakeFiles/generate_pyx_hmm_viterbi.dir/__/__/bindings/python/generate_pyx_hmm_viterbi.cpp.o -c /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/generate_pyx_hmm_viterbi.cpp
[261/628] /usr/bin/x86_64-pc-linux-gnu-g++ -DARMA_NO_DEBUG -DHAS_OPENMP -DHAS_STB -DNDEBUG -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include/stb -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -DBINDING_TYPE=BINDING_TYPE_R -std=gnu++11 -MD -MT src/mlpack/methods/hmm/CMakeFiles/generate_r_hmm_loglik.dir/__/__/bindings/R/print_R.cpp.o -MF src/mlpack/methods/hmm/CMakeFiles/generate_r_hmm_loglik.dir/__/__/bindings/R/print_R.cpp.o.d -o src/mlpack/methods/hmm/CMakeFiles/generate_r_hmm_loglik.dir/__/__/bindings/R/print_R.cpp.o -c /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/R/print_R.cpp
[262/628] /usr/bin/x86_64-pc-linux-gnu-g++ -DARMA_NO_DEBUG -DHAS_OPENMP -DHAS_STB -DNDEBUG -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include/stb -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -DBINDING_TYPE=BINDING_TYPE_R -std=gnu++11 -MD -MT src/mlpack/methods/hmm/CMakeFiles/generate_r_hmm_loglik.dir/__/__/bindings/R/build/generate_r_hmm_loglik.cpp.o -MF src/mlpack/methods/hmm/CMakeFiles/generate_r_hmm_loglik.dir/__/__/bindings/R/build/generate_r_hmm_loglik.cpp.o.d -o src/mlpack/methods/hmm/CMakeFiles/generate_r_hmm_loglik.dir/__/__/bindings/R/build/generate_r_hmm_loglik.cpp.o -c /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/build/generate_r_hmm_loglik.cpp
[263/628] cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/methods/kde && /usr/bin/cmake -DMODEL_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/mlpack/model.txt -DPROGRAM_NAME=kde -DPROGRAM_MAIN_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/methods/kde/kde_main.cpp -DSOURCE_DIR=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1 -DR_CPP_IN=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/R/r_method.cpp.in -DR_CPP_OUT=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/mlpack/src/kde.cpp -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/R/ConfigureRCPP.cmake
[264/628] cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/methods/kde && /usr/bin/cmake -DNAME=kde -DGENERATE_CPP_IN=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/R/generate_R.cpp.in -DGENERATE_CPP_OUT=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/build/generate_r_kde.cpp -DPROGRAM_MAIN_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/methods/kde/kde_main.cpp -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/ConfigureFile.cmake
[265/628] : && /usr/bin/x86_64-pc-linux-gnu-g++ -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 src/mlpack/methods/hmm/CMakeFiles/generate_r_hmm_loglik.dir/__/__/bindings/R/build/generate_r_hmm_loglik.cpp.o src/mlpack/methods/hmm/CMakeFiles/generate_r_hmm_loglik.dir/__/__/bindings/R/print_R.cpp.o -o src/mlpack/bindings/R/build/bin/generate_r_hmm_loglik -Wl,-rpath,/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib lib/libmlpack.so.3.4 /usr/lib64/libarmadillo.so /usr/lib/gcc/x86_64-pc-linux-gnu/11.2.0/libgomp.so /usr/lib64/libpthread.so && cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/methods/hmm && /usr/bin/cmake -DGENERATE_BINDING_PROGRAM=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/build/bin/generate_r_hmm_loglik -DBINDING_OUTPUT_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/mlpack/R/hmm_loglik.R -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/GenerateBinding.cmake
[266/628] : && /usr/bin/x86_64-pc-linux-gnu-g++ -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 src/mlpack/methods/hmm/CMakeFiles/generate_r_hmm_generate.dir/__/__/bindings/R/build/generate_r_hmm_generate.cpp.o src/mlpack/methods/hmm/CMakeFiles/generate_r_hmm_generate.dir/__/__/bindings/R/print_R.cpp.o -o src/mlpack/bindings/R/build/bin/generate_r_hmm_generate -Wl,-rpath,/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib lib/libmlpack.so.3.4 /usr/lib64/libarmadillo.so /usr/lib/gcc/x86_64-pc-linux-gnu/11.2.0/libgomp.so /usr/lib64/libpthread.so && cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/methods/hmm && /usr/bin/cmake -DGENERATE_BINDING_PROGRAM=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/build/bin/generate_r_hmm_generate -DBINDING_OUTPUT_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/mlpack/R/hmm_generate.R -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/GenerateBinding.cmake
[267/628] : && /usr/bin/x86_64-pc-linux-gnu-g++ -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 src/mlpack/methods/hmm/CMakeFiles/generate_pyx_hmm_viterbi.dir/__/__/bindings/python/generate_pyx_hmm_viterbi.cpp.o src/mlpack/methods/hmm/CMakeFiles/generate_pyx_hmm_viterbi.dir/__/__/bindings/python/print_pyx.cpp.o -o bin/generate_pyx_hmm_viterbi -Wl,-rpath,/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib lib/libmlpack.so.3.4 /usr/lib64/libarmadillo.so /usr/lib/gcc/x86_64-pc-linux-gnu/11.2.0/libgomp.so /usr/lib64/libpthread.so && cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/methods/hmm && /usr/bin/cmake -DPROGRAM=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/bin/generate_pyx_hmm_viterbi -DOUTPUT_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/mlpack/hmm_viterbi.pyx -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/RunProgram.cmake
[268/628] cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/methods/kde && /usr/bin/cmake -DGENERATE_CPP_IN=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/python/generate_pyx.cpp.in -DGENERATE_CPP_OUT=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/generate_pyx_kde.cpp -DPROGRAM_MAIN_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/methods/kde/kde_main.cpp -DPROGRAM_NAME=kde -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/ConfigureFile.cmake
[269/628] : && /usr/bin/x86_64-pc-linux-gnu-g++ -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 src/mlpack/methods/kde/CMakeFiles/mlpack_kde.dir/kde_main.cpp.o -o bin/mlpack_kde -Wl,-rpath,/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib: lib/libmlpack.so.3.4 /usr/lib64/libarmadillo.so -lpthread /usr/lib/gcc/x86_64-pc-linux-gnu/11.2.0/libgomp.so /usr/lib64/libpthread.so && :
[270/628] /usr/bin/x86_64-pc-linux-gnu-g++ -DARMA_NO_DEBUG -DHAS_OPENMP -DHAS_STB -DNDEBUG -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include/stb -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -DBINDING_TYPE=BINDING_TYPE_R -std=gnu++11 -MD -MT src/mlpack/methods/hoeffding_trees/CMakeFiles/generate_r_hoeffding_tree.dir/__/__/bindings/R/print_R.cpp.o -MF src/mlpack/methods/hoeffding_trees/CMakeFiles/generate_r_hoeffding_tree.dir/__/__/bindings/R/print_R.cpp.o.d -o src/mlpack/methods/hoeffding_trees/CMakeFiles/generate_r_hoeffding_tree.dir/__/__/bindings/R/print_R.cpp.o -c /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/R/print_R.cpp
[271/628] /usr/bin/x86_64-pc-linux-gnu-g++ -DARMA_NO_DEBUG -DHAS_OPENMP -DHAS_STB -DNDEBUG -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include/stb -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -DBINDING_TYPE=BINDING_TYPE_PYX -std=gnu++11 -MD -MT src/mlpack/methods/hoeffding_trees/CMakeFiles/generate_pyx_hoeffding_tree.dir/__/__/bindings/python/print_pyx.cpp.o -MF src/mlpack/methods/hoeffding_trees/CMakeFiles/generate_pyx_hoeffding_tree.dir/__/__/bindings/python/print_pyx.cpp.o.d -o src/mlpack/methods/hoeffding_trees/CMakeFiles/generate_pyx_hoeffding_tree.dir/__/__/bindings/python/print_pyx.cpp.o -c /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/python/print_pyx.cpp
[272/628] cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/methods/kernel_pca && /usr/bin/cmake -DMODEL_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/mlpack/model.txt -DPROGRAM_NAME=kernel_pca -DPROGRAM_MAIN_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/methods/kernel_pca/kernel_pca_main.cpp -DSOURCE_DIR=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1 -DR_CPP_IN=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/R/r_method.cpp.in -DR_CPP_OUT=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/mlpack/src/kernel_pca.cpp -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/R/ConfigureRCPP.cmake
[273/628] cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/methods/kernel_pca && /usr/bin/cmake -DNAME=kernel_pca -DGENERATE_CPP_IN=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/R/generate_R.cpp.in -DGENERATE_CPP_OUT=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/build/generate_r_kernel_pca.cpp -DPROGRAM_MAIN_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/methods/kernel_pca/kernel_pca_main.cpp -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/ConfigureFile.cmake
[274/628] /usr/bin/x86_64-pc-linux-gnu-g++ -DARMA_NO_DEBUG -DHAS_OPENMP -DHAS_STB -DNDEBUG -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include/stb -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -DBINDING_TYPE=BINDING_TYPE_R -std=gnu++11 -MD -MT src/mlpack/methods/hoeffding_trees/CMakeFiles/generate_r_hoeffding_tree.dir/__/__/bindings/R/build/generate_r_hoeffding_tree.cpp.o -MF src/mlpack/methods/hoeffding_trees/CMakeFiles/generate_r_hoeffding_tree.dir/__/__/bindings/R/build/generate_r_hoeffding_tree.cpp.o.d -o src/mlpack/methods/hoeffding_trees/CMakeFiles/generate_r_hoeffding_tree.dir/__/__/bindings/R/build/generate_r_hoeffding_tree.cpp.o -c /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/build/generate_r_hoeffding_tree.cpp
[275/628] /usr/bin/x86_64-pc-linux-gnu-g++ -DARMA_NO_DEBUG -DHAS_OPENMP -DHAS_STB -DNDEBUG -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include/stb -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -DBINDING_TYPE=BINDING_TYPE_PYX -std=gnu++11 -MD -MT src/mlpack/methods/hoeffding_trees/CMakeFiles/generate_pyx_hoeffding_tree.dir/__/__/bindings/python/generate_pyx_hoeffding_tree.cpp.o -MF src/mlpack/methods/hoeffding_trees/CMakeFiles/generate_pyx_hoeffding_tree.dir/__/__/bindings/python/generate_pyx_hoeffding_tree.cpp.o.d -o src/mlpack/methods/hoeffding_trees/CMakeFiles/generate_pyx_hoeffding_tree.dir/__/__/bindings/python/generate_pyx_hoeffding_tree.cpp.o -c /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/generate_pyx_hoeffding_tree.cpp
[276/628] cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python && /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/temp/python3.9/bin/python /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/setup.py build_ext --module=cf.pyx
running build_ext
cythoning mlpack/cf.pyx to mlpack/cf.cpp
/usr/lib/python3.9/site-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/mlpack/cf.pyx
tree = Parsing.p_module(s, pxd, full_module_name)
building 'mlpack.cf' extension
x86_64-pc-linux-gnu-g++ -pthread -Os -pipe -march=native -frecord-gcc-switches -fPIC -I/usr/lib/python3.9/site-packages/numpy/core/include -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/ -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include -I/usr/include -I/usr/include -I/usr/include/stb -I/usr/include -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -I/usr/include/python3.9 -c mlpack/cf.cpp -o build/temp.linux-x86_64-3.9/mlpack/cf.o -DBINDING_TYPE=BINDING_TYPE_PYX -std=c++11 -fopenmp -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp
In file included from /usr/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h:1969,
from /usr/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h:12,
from /usr/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h:4,
from mlpack/cf.cpp:635:
/usr/lib/python3.9/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
17 | #warning "Using deprecated NumPy API, disable it with " \
| ^~~~~~~
x86_64-pc-linux-gnu-g++ -pthread -shared -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 -Os -pipe -march=native -frecord-gcc-switches build/temp.linux-x86_64-3.9/mlpack/cf.o -L/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib -L/usr/lib64 -o build/lib.linux-x86_64-3.9/mlpack/cf.cpython-39-x86_64-linux-gnu.so -fopenmp /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib/libmlpack.so /usr/lib64/libarmadillo.so
[277/628] : && /usr/bin/x86_64-pc-linux-gnu-g++ -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 src/mlpack/methods/hoeffding_trees/CMakeFiles/generate_r_hoeffding_tree.dir/__/__/bindings/R/build/generate_r_hoeffding_tree.cpp.o src/mlpack/methods/hoeffding_trees/CMakeFiles/generate_r_hoeffding_tree.dir/__/__/bindings/R/print_R.cpp.o -o src/mlpack/bindings/R/build/bin/generate_r_hoeffding_tree -Wl,-rpath,/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib lib/libmlpack.so.3.4 /usr/lib64/libarmadillo.so /usr/lib/gcc/x86_64-pc-linux-gnu/11.2.0/libgomp.so /usr/lib64/libpthread.so && cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/methods/hoeffding_trees && /usr/bin/cmake -DGENERATE_BINDING_PROGRAM=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/build/bin/generate_r_hoeffding_tree -DBINDING_OUTPUT_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/mlpack/R/hoeffding_tree.R -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/GenerateBinding.cmake
[278/628] : && /usr/bin/x86_64-pc-linux-gnu-g++ -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 src/mlpack/methods/hoeffding_trees/CMakeFiles/generate_pyx_hoeffding_tree.dir/__/__/bindings/python/generate_pyx_hoeffding_tree.cpp.o src/mlpack/methods/hoeffding_trees/CMakeFiles/generate_pyx_hoeffding_tree.dir/__/__/bindings/python/print_pyx.cpp.o -o bin/generate_pyx_hoeffding_tree -Wl,-rpath,/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib lib/libmlpack.so.3.4 /usr/lib64/libarmadillo.so /usr/lib/gcc/x86_64-pc-linux-gnu/11.2.0/libgomp.so /usr/lib64/libpthread.so && cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/methods/hoeffding_trees && /usr/bin/cmake -DPROGRAM=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/bin/generate_pyx_hoeffding_tree -DOUTPUT_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/mlpack/hoeffding_tree.pyx -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/RunProgram.cmake
[279/628] cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/methods/kernel_pca && /usr/bin/cmake -DGENERATE_CPP_IN=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/python/generate_pyx.cpp.in -DGENERATE_CPP_OUT=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/generate_pyx_kernel_pca.cpp -DPROGRAM_MAIN_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/methods/kernel_pca/kernel_pca_main.cpp -DPROGRAM_NAME=kernel_pca -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/ConfigureFile.cmake
[280/628] /usr/bin/x86_64-pc-linux-gnu-g++ -DARMA_NO_DEBUG -DHAS_OPENMP -DHAS_STB -DNDEBUG -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include/stb -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -DBINDING_TYPE=BINDING_TYPE_R -std=gnu++11 -MD -MT src/mlpack/methods/kde/CMakeFiles/generate_r_kde.dir/__/__/bindings/R/print_R.cpp.o -MF src/mlpack/methods/kde/CMakeFiles/generate_r_kde.dir/__/__/bindings/R/print_R.cpp.o.d -o src/mlpack/methods/kde/CMakeFiles/generate_r_kde.dir/__/__/bindings/R/print_R.cpp.o -c /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/R/print_R.cpp
[281/628] /usr/bin/x86_64-pc-linux-gnu-g++ -DARMA_NO_DEBUG -DHAS_OPENMP -DHAS_STB -DNDEBUG -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include/stb -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -DBINDING_TYPE=BINDING_TYPE_PYX -std=gnu++11 -MD -MT src/mlpack/methods/kde/CMakeFiles/generate_pyx_kde.dir/__/__/bindings/python/print_pyx.cpp.o -MF src/mlpack/methods/kde/CMakeFiles/generate_pyx_kde.dir/__/__/bindings/python/print_pyx.cpp.o.d -o src/mlpack/methods/kde/CMakeFiles/generate_pyx_kde.dir/__/__/bindings/python/print_pyx.cpp.o -c /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/python/print_pyx.cpp
[282/628] cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python && /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/temp/python3.9/bin/python /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/setup.py build_ext --module=hmm_loglik.pyx
running build_ext
cythoning mlpack/hmm_loglik.pyx to mlpack/hmm_loglik.cpp
/usr/lib/python3.9/site-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/mlpack/hmm_loglik.pyx
tree = Parsing.p_module(s, pxd, full_module_name)
building 'mlpack.hmm_loglik' extension
x86_64-pc-linux-gnu-g++ -pthread -Os -pipe -march=native -frecord-gcc-switches -fPIC -I/usr/lib/python3.9/site-packages/numpy/core/include -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/ -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include -I/usr/include -I/usr/include -I/usr/include/stb -I/usr/include -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -I/usr/include/python3.9 -c mlpack/hmm_loglik.cpp -o build/temp.linux-x86_64-3.9/mlpack/hmm_loglik.o -DBINDING_TYPE=BINDING_TYPE_PYX -std=c++11 -fopenmp -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp
In file included from /usr/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h:1969,
from /usr/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h:12,
from /usr/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h:4,
from mlpack/hmm_loglik.cpp:635:
/usr/lib/python3.9/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
17 | #warning "Using deprecated NumPy API, disable it with " \
| ^~~~~~~
x86_64-pc-linux-gnu-g++ -pthread -shared -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 -Os -pipe -march=native -frecord-gcc-switches build/temp.linux-x86_64-3.9/mlpack/hmm_loglik.o -L/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib -L/usr/lib64 -o build/lib.linux-x86_64-3.9/mlpack/hmm_loglik.cpython-39-x86_64-linux-gnu.so -fopenmp /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib/libmlpack.so /usr/lib64/libarmadillo.so
[283/628] cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/methods/kmeans && /usr/bin/cmake -DMODEL_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/mlpack/model.txt -DPROGRAM_NAME=kmeans -DPROGRAM_MAIN_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/methods/kmeans/kmeans_main.cpp -DSOURCE_DIR=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1 -DR_CPP_IN=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/R/r_method.cpp.in -DR_CPP_OUT=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/mlpack/src/kmeans.cpp -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/R/ConfigureRCPP.cmake
[284/628] cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/methods/kmeans && /usr/bin/cmake -DNAME=kmeans -DGENERATE_CPP_IN=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/R/generate_R.cpp.in -DGENERATE_CPP_OUT=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/build/generate_r_kmeans.cpp -DPROGRAM_MAIN_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/methods/kmeans/kmeans_main.cpp -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/ConfigureFile.cmake
[285/628] /usr/bin/x86_64-pc-linux-gnu-g++ -DARMA_NO_DEBUG -DHAS_OPENMP -DHAS_STB -DNDEBUG -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include/stb -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -DBINDING_TYPE=BINDING_TYPE_R -std=gnu++11 -MD -MT src/mlpack/methods/kde/CMakeFiles/generate_r_kde.dir/__/__/bindings/R/build/generate_r_kde.cpp.o -MF src/mlpack/methods/kde/CMakeFiles/generate_r_kde.dir/__/__/bindings/R/build/generate_r_kde.cpp.o.d -o src/mlpack/methods/kde/CMakeFiles/generate_r_kde.dir/__/__/bindings/R/build/generate_r_kde.cpp.o -c /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/build/generate_r_kde.cpp
[286/628] /usr/bin/x86_64-pc-linux-gnu-g++ -DARMA_NO_DEBUG -DHAS_OPENMP -DHAS_STB -DNDEBUG -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include/stb -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -DBINDING_TYPE=BINDING_TYPE_PYX -std=gnu++11 -MD -MT src/mlpack/methods/kde/CMakeFiles/generate_pyx_kde.dir/__/__/bindings/python/generate_pyx_kde.cpp.o -MF src/mlpack/methods/kde/CMakeFiles/generate_pyx_kde.dir/__/__/bindings/python/generate_pyx_kde.cpp.o.d -o src/mlpack/methods/kde/CMakeFiles/generate_pyx_kde.dir/__/__/bindings/python/generate_pyx_kde.cpp.o -c /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/generate_pyx_kde.cpp
[287/628] cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python && /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/temp/python3.9/bin/python /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/setup.py build_ext --module=hmm_train.pyx
running build_ext
cythoning mlpack/hmm_train.pyx to mlpack/hmm_train.cpp
/usr/lib/python3.9/site-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/mlpack/hmm_train.pyx
tree = Parsing.p_module(s, pxd, full_module_name)
building 'mlpack.hmm_train' extension
x86_64-pc-linux-gnu-g++ -pthread -Os -pipe -march=native -frecord-gcc-switches -fPIC -I/usr/lib/python3.9/site-packages/numpy/core/include -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/ -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include -I/usr/include -I/usr/include -I/usr/include/stb -I/usr/include -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -I/usr/include/python3.9 -c mlpack/hmm_train.cpp -o build/temp.linux-x86_64-3.9/mlpack/hmm_train.o -DBINDING_TYPE=BINDING_TYPE_PYX -std=c++11 -fopenmp -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp
In file included from /usr/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h:1969,
from /usr/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h:12,
from /usr/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h:4,
from mlpack/hmm_train.cpp:635:
/usr/lib/python3.9/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
17 | #warning "Using deprecated NumPy API, disable it with " \
| ^~~~~~~
x86_64-pc-linux-gnu-g++ -pthread -shared -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 -Os -pipe -march=native -frecord-gcc-switches build/temp.linux-x86_64-3.9/mlpack/hmm_train.o -L/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib -L/usr/lib64 -o build/lib.linux-x86_64-3.9/mlpack/hmm_train.cpython-39-x86_64-linux-gnu.so -fopenmp /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib/libmlpack.so /usr/lib64/libarmadillo.so
[288/628] /usr/bin/x86_64-pc-linux-gnu-g++ -DARMA_NO_DEBUG -DHAS_OPENMP -DHAS_STB -DNDEBUG -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include/stb -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -DBINDING_TYPE=BINDING_TYPE_R -std=gnu++11 -MD -MT src/mlpack/methods/kernel_pca/CMakeFiles/generate_r_kernel_pca.dir/__/__/bindings/R/print_R.cpp.o -MF src/mlpack/methods/kernel_pca/CMakeFiles/generate_r_kernel_pca.dir/__/__/bindings/R/print_R.cpp.o.d -o src/mlpack/methods/kernel_pca/CMakeFiles/generate_r_kernel_pca.dir/__/__/bindings/R/print_R.cpp.o -c /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/R/print_R.cpp
[289/628] /usr/bin/x86_64-pc-linux-gnu-g++ -DARMA_NO_DEBUG -DHAS_OPENMP -DHAS_STB -DNDEBUG -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include/stb -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -DBINDING_TYPE=BINDING_TYPE_R -std=gnu++11 -MD -MT src/mlpack/methods/kernel_pca/CMakeFiles/generate_r_kernel_pca.dir/__/__/bindings/R/build/generate_r_kernel_pca.cpp.o -MF src/mlpack/methods/kernel_pca/CMakeFiles/generate_r_kernel_pca.dir/__/__/bindings/R/build/generate_r_kernel_pca.cpp.o.d -o src/mlpack/methods/kernel_pca/CMakeFiles/generate_r_kernel_pca.dir/__/__/bindings/R/build/generate_r_kernel_pca.cpp.o -c /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/build/generate_r_kernel_pca.cpp
[290/628] /usr/bin/x86_64-pc-linux-gnu-g++ -DARMA_NO_DEBUG -DHAS_OPENMP -DHAS_STB -DNDEBUG -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include/stb -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -DBINDING_TYPE=BINDING_TYPE_PYX -std=gnu++11 -MD -MT src/mlpack/methods/kernel_pca/CMakeFiles/generate_pyx_kernel_pca.dir/__/__/bindings/python/print_pyx.cpp.o -MF src/mlpack/methods/kernel_pca/CMakeFiles/generate_pyx_kernel_pca.dir/__/__/bindings/python/print_pyx.cpp.o.d -o src/mlpack/methods/kernel_pca/CMakeFiles/generate_pyx_kernel_pca.dir/__/__/bindings/python/print_pyx.cpp.o -c /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/python/print_pyx.cpp
[291/628] cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python && /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/temp/python3.9/bin/python /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/setup.py build_ext --module=hmm_viterbi.pyx
running build_ext
cythoning mlpack/hmm_viterbi.pyx to mlpack/hmm_viterbi.cpp
/usr/lib/python3.9/site-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/mlpack/hmm_viterbi.pyx
tree = Parsing.p_module(s, pxd, full_module_name)
building 'mlpack.hmm_viterbi' extension
x86_64-pc-linux-gnu-g++ -pthread -Os -pipe -march=native -frecord-gcc-switches -fPIC -I/usr/lib/python3.9/site-packages/numpy/core/include -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/ -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include -I/usr/include -I/usr/include -I/usr/include/stb -I/usr/include -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -I/usr/include/python3.9 -c mlpack/hmm_viterbi.cpp -o build/temp.linux-x86_64-3.9/mlpack/hmm_viterbi.o -DBINDING_TYPE=BINDING_TYPE_PYX -std=c++11 -fopenmp -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp
In file included from /usr/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h:1969,
from /usr/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h:12,
from /usr/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h:4,
from mlpack/hmm_viterbi.cpp:635:
/usr/lib/python3.9/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
17 | #warning "Using deprecated NumPy API, disable it with " \
| ^~~~~~~
x86_64-pc-linux-gnu-g++ -pthread -shared -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 -Os -pipe -march=native -frecord-gcc-switches build/temp.linux-x86_64-3.9/mlpack/hmm_viterbi.o -L/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib -L/usr/lib64 -o build/lib.linux-x86_64-3.9/mlpack/hmm_viterbi.cpython-39-x86_64-linux-gnu.so -fopenmp /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib/libmlpack.so /usr/lib64/libarmadillo.so
[292/628] /usr/bin/x86_64-pc-linux-gnu-g++ -DARMA_NO_DEBUG -DHAS_OPENMP -DHAS_STB -DNDEBUG -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include/stb -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -DBINDING_TYPE=BINDING_TYPE_CLI -std=gnu++11 -MD -MT src/mlpack/methods/kernel_pca/CMakeFiles/mlpack_kernel_pca.dir/kernel_pca_main.cpp.o -MF src/mlpack/methods/kernel_pca/CMakeFiles/mlpack_kernel_pca.dir/kernel_pca_main.cpp.o.d -o src/mlpack/methods/kernel_pca/CMakeFiles/mlpack_kernel_pca.dir/kernel_pca_main.cpp.o -c /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/methods/kernel_pca/kernel_pca_main.cpp
[293/628] /usr/bin/x86_64-pc-linux-gnu-g++ -DARMA_NO_DEBUG -DHAS_OPENMP -DHAS_STB -DNDEBUG -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include/stb -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -DBINDING_TYPE=BINDING_TYPE_PYX -std=gnu++11 -MD -MT src/mlpack/methods/kernel_pca/CMakeFiles/generate_pyx_kernel_pca.dir/__/__/bindings/python/generate_pyx_kernel_pca.cpp.o -MF src/mlpack/methods/kernel_pca/CMakeFiles/generate_pyx_kernel_pca.dir/__/__/bindings/python/generate_pyx_kernel_pca.cpp.o.d -o src/mlpack/methods/kernel_pca/CMakeFiles/generate_pyx_kernel_pca.dir/__/__/bindings/python/generate_pyx_kernel_pca.cpp.o -c /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/generate_pyx_kernel_pca.cpp
[294/628] cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python && /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/temp/python3.9/bin/python /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/setup.py build_ext --module=hoeffding_tree.pyx
running build_ext
cythoning mlpack/hoeffding_tree.pyx to mlpack/hoeffding_tree.cpp
/usr/lib/python3.9/site-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/mlpack/hoeffding_tree.pyx
tree = Parsing.p_module(s, pxd, full_module_name)
building 'mlpack.hoeffding_tree' extension
x86_64-pc-linux-gnu-g++ -pthread -Os -pipe -march=native -frecord-gcc-switches -fPIC -I/usr/lib/python3.9/site-packages/numpy/core/include -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/ -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include -I/usr/include -I/usr/include -I/usr/include/stb -I/usr/include -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -I/usr/include/python3.9 -c mlpack/hoeffding_tree.cpp -o build/temp.linux-x86_64-3.9/mlpack/hoeffding_tree.o -DBINDING_TYPE=BINDING_TYPE_PYX -std=c++11 -fopenmp -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp
In file included from /usr/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h:1969,
from /usr/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h:12,
from /usr/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h:4,
from mlpack/hoeffding_tree.cpp:635:
/usr/lib/python3.9/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
17 | #warning "Using deprecated NumPy API, disable it with " \
| ^~~~~~~
x86_64-pc-linux-gnu-g++ -pthread -shared -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 -Os -pipe -march=native -frecord-gcc-switches build/temp.linux-x86_64-3.9/mlpack/hoeffding_tree.o -L/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib -L/usr/lib64 -o build/lib.linux-x86_64-3.9/mlpack/hoeffding_tree.cpython-39-x86_64-linux-gnu.so -fopenmp /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib/libmlpack.so /usr/lib64/libarmadillo.so
[295/628] cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/methods/lars && /usr/bin/cmake -DGENERATE_CPP_IN=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/python/generate_pyx.cpp.in -DGENERATE_CPP_OUT=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/generate_pyx_lars.cpp -DPROGRAM_MAIN_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/methods/lars/lars_main.cpp -DPROGRAM_NAME=lars -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/ConfigureFile.cmake
[296/628] cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/methods/kmeans && /usr/bin/cmake -DGENERATE_CPP_IN=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/python/generate_pyx.cpp.in -DGENERATE_CPP_OUT=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/generate_pyx_kmeans.cpp -DPROGRAM_MAIN_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/methods/kmeans/kmeans_main.cpp -DPROGRAM_NAME=kmeans -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/ConfigureFile.cmake
[297/628] cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/methods/lars && /usr/bin/cmake -DMODEL_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/mlpack/model.txt -DPROGRAM_NAME=lars -DPROGRAM_MAIN_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/methods/lars/lars_main.cpp -DSOURCE_DIR=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1 -DR_CPP_IN=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/R/r_method.cpp.in -DR_CPP_OUT=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/mlpack/src/lars.cpp -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/R/ConfigureRCPP.cmake
[298/628] : && /usr/bin/x86_64-pc-linux-gnu-g++ -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 src/mlpack/methods/kde/CMakeFiles/generate_r_kde.dir/__/__/bindings/R/build/generate_r_kde.cpp.o src/mlpack/methods/kde/CMakeFiles/generate_r_kde.dir/__/__/bindings/R/print_R.cpp.o -o src/mlpack/bindings/R/build/bin/generate_r_kde -Wl,-rpath,/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib lib/libmlpack.so.3.4 /usr/lib64/libarmadillo.so /usr/lib/gcc/x86_64-pc-linux-gnu/11.2.0/libgomp.so /usr/lib64/libpthread.so && cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/methods/kde && /usr/bin/cmake -DGENERATE_BINDING_PROGRAM=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/build/bin/generate_r_kde -DBINDING_OUTPUT_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/mlpack/R/kde.R -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/GenerateBinding.cmake
[299/628] : && /usr/bin/x86_64-pc-linux-gnu-g++ -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 src/mlpack/methods/kernel_pca/CMakeFiles/generate_pyx_kernel_pca.dir/__/__/bindings/python/generate_pyx_kernel_pca.cpp.o src/mlpack/methods/kernel_pca/CMakeFiles/generate_pyx_kernel_pca.dir/__/__/bindings/python/print_pyx.cpp.o -o bin/generate_pyx_kernel_pca -Wl,-rpath,/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib lib/libmlpack.so.3.4 /usr/lib64/libarmadillo.so /usr/lib/gcc/x86_64-pc-linux-gnu/11.2.0/libgomp.so /usr/lib64/libpthread.so && cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/methods/kernel_pca && /usr/bin/cmake -DPROGRAM=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/bin/generate_pyx_kernel_pca -DOUTPUT_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/mlpack/kernel_pca.pyx -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/RunProgram.cmake
[300/628] : && /usr/bin/x86_64-pc-linux-gnu-g++ -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 src/mlpack/methods/kde/CMakeFiles/generate_pyx_kde.dir/__/__/bindings/python/generate_pyx_kde.cpp.o src/mlpack/methods/kde/CMakeFiles/generate_pyx_kde.dir/__/__/bindings/python/print_pyx.cpp.o -o bin/generate_pyx_kde -Wl,-rpath,/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib lib/libmlpack.so.3.4 /usr/lib64/libarmadillo.so /usr/lib/gcc/x86_64-pc-linux-gnu/11.2.0/libgomp.so /usr/lib64/libpthread.so && cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/methods/kde && /usr/bin/cmake -DPROGRAM=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/bin/generate_pyx_kde -DOUTPUT_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/mlpack/kde.pyx -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/RunProgram.cmake
[301/628] : && /usr/bin/x86_64-pc-linux-gnu-g++ -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 src/mlpack/methods/kernel_pca/CMakeFiles/mlpack_kernel_pca.dir/kernel_pca_main.cpp.o -o bin/mlpack_kernel_pca -Wl,-rpath,/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib: lib/libmlpack.so.3.4 /usr/lib64/libarmadillo.so -lpthread /usr/lib/gcc/x86_64-pc-linux-gnu/11.2.0/libgomp.so /usr/lib64/libpthread.so && :
[302/628] cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/methods/lars && /usr/bin/cmake -DNAME=lars -DGENERATE_CPP_IN=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/R/generate_R.cpp.in -DGENERATE_CPP_OUT=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/build/generate_r_lars.cpp -DPROGRAM_MAIN_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/methods/lars/lars_main.cpp -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/ConfigureFile.cmake
[303/628] : && /usr/bin/x86_64-pc-linux-gnu-g++ -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 src/mlpack/methods/kernel_pca/CMakeFiles/generate_r_kernel_pca.dir/__/__/bindings/R/build/generate_r_kernel_pca.cpp.o src/mlpack/methods/kernel_pca/CMakeFiles/generate_r_kernel_pca.dir/__/__/bindings/R/print_R.cpp.o -o src/mlpack/bindings/R/build/bin/generate_r_kernel_pca -Wl,-rpath,/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib lib/libmlpack.so.3.4 /usr/lib64/libarmadillo.so /usr/lib/gcc/x86_64-pc-linux-gnu/11.2.0/libgomp.so /usr/lib64/libpthread.so && cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/methods/kernel_pca && /usr/bin/cmake -DGENERATE_BINDING_PROGRAM=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/build/bin/generate_r_kernel_pca -DBINDING_OUTPUT_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/mlpack/R/kernel_pca.R -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/GenerateBinding.cmake
[304/628] /usr/bin/x86_64-pc-linux-gnu-g++ -DARMA_NO_DEBUG -DHAS_OPENMP -DHAS_STB -DNDEBUG -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include/stb -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -DBINDING_TYPE=BINDING_TYPE_R -std=gnu++11 -MD -MT src/mlpack/methods/kmeans/CMakeFiles/generate_r_kmeans.dir/__/__/bindings/R/build/generate_r_kmeans.cpp.o -MF src/mlpack/methods/kmeans/CMakeFiles/generate_r_kmeans.dir/__/__/bindings/R/build/generate_r_kmeans.cpp.o.d -o src/mlpack/methods/kmeans/CMakeFiles/generate_r_kmeans.dir/__/__/bindings/R/build/generate_r_kmeans.cpp.o -c /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/build/generate_r_kmeans.cpp
[305/628] /usr/bin/x86_64-pc-linux-gnu-g++ -DARMA_NO_DEBUG -DHAS_OPENMP -DHAS_STB -DNDEBUG -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include/stb -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -DBINDING_TYPE=BINDING_TYPE_CLI -std=gnu++11 -MD -MT src/mlpack/methods/kmeans/CMakeFiles/mlpack_kmeans.dir/kmeans_main.cpp.o -MF src/mlpack/methods/kmeans/CMakeFiles/mlpack_kmeans.dir/kmeans_main.cpp.o.d -o src/mlpack/methods/kmeans/CMakeFiles/mlpack_kmeans.dir/kmeans_main.cpp.o -c /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/methods/kmeans/kmeans_main.cpp
[306/628] : && /usr/bin/x86_64-pc-linux-gnu-g++ -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 src/mlpack/methods/kmeans/CMakeFiles/mlpack_kmeans.dir/kmeans_main.cpp.o -o bin/mlpack_kmeans -Wl,-rpath,/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib: lib/libmlpack.so.3.4 /usr/lib64/libarmadillo.so -lpthread /usr/lib/gcc/x86_64-pc-linux-gnu/11.2.0/libgomp.so /usr/lib64/libpthread.so && :
[307/628] cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/methods/linear_regression && /usr/bin/cmake -DMODEL_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/mlpack/model.txt -DPROGRAM_NAME=linear_regression -DPROGRAM_MAIN_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/methods/linear_regression/linear_regression_main.cpp -DSOURCE_DIR=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1 -DR_CPP_IN=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/R/r_method.cpp.in -DR_CPP_OUT=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/mlpack/src/linear_regression.cpp -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/R/ConfigureRCPP.cmake
[308/628] cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/methods/linear_regression && /usr/bin/cmake -DNAME=linear_regression -DGENERATE_CPP_IN=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/R/generate_R.cpp.in -DGENERATE_CPP_OUT=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/build/generate_r_linear_regression.cpp -DPROGRAM_MAIN_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/methods/linear_regression/linear_regression_main.cpp -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/ConfigureFile.cmake
[309/628] /usr/bin/x86_64-pc-linux-gnu-g++ -DARMA_NO_DEBUG -DHAS_OPENMP -DHAS_STB -DNDEBUG -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include/stb -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -DBINDING_TYPE=BINDING_TYPE_R -std=gnu++11 -MD -MT src/mlpack/methods/kmeans/CMakeFiles/generate_r_kmeans.dir/__/__/bindings/R/print_R.cpp.o -MF src/mlpack/methods/kmeans/CMakeFiles/generate_r_kmeans.dir/__/__/bindings/R/print_R.cpp.o.d -o src/mlpack/methods/kmeans/CMakeFiles/generate_r_kmeans.dir/__/__/bindings/R/print_R.cpp.o -c /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/R/print_R.cpp
[310/628] : && /usr/bin/x86_64-pc-linux-gnu-g++ -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 src/mlpack/methods/kmeans/CMakeFiles/generate_r_kmeans.dir/__/__/bindings/R/build/generate_r_kmeans.cpp.o src/mlpack/methods/kmeans/CMakeFiles/generate_r_kmeans.dir/__/__/bindings/R/print_R.cpp.o -o src/mlpack/bindings/R/build/bin/generate_r_kmeans -Wl,-rpath,/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib lib/libmlpack.so.3.4 /usr/lib64/libarmadillo.so /usr/lib/gcc/x86_64-pc-linux-gnu/11.2.0/libgomp.so /usr/lib64/libpthread.so && cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/methods/kmeans && /usr/bin/cmake -DGENERATE_BINDING_PROGRAM=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/build/bin/generate_r_kmeans -DBINDING_OUTPUT_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/mlpack/R/kmeans.R -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/GenerateBinding.cmake
[311/628] /usr/bin/x86_64-pc-linux-gnu-g++ -DARMA_NO_DEBUG -DHAS_OPENMP -DHAS_STB -DNDEBUG -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include/stb -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -DBINDING_TYPE=BINDING_TYPE_R -std=gnu++11 -MD -MT src/mlpack/methods/lars/CMakeFiles/generate_r_lars.dir/__/__/bindings/R/print_R.cpp.o -MF src/mlpack/methods/lars/CMakeFiles/generate_r_lars.dir/__/__/bindings/R/print_R.cpp.o.d -o src/mlpack/methods/lars/CMakeFiles/generate_r_lars.dir/__/__/bindings/R/print_R.cpp.o -c /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/R/print_R.cpp
[312/628] cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/methods/linear_regression && /usr/bin/cmake -DGENERATE_CPP_IN=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/python/generate_pyx.cpp.in -DGENERATE_CPP_OUT=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/generate_pyx_linear_regression.cpp -DPROGRAM_MAIN_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/methods/linear_regression/linear_regression_main.cpp -DPROGRAM_NAME=linear_regression -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/ConfigureFile.cmake
[313/628] /usr/bin/x86_64-pc-linux-gnu-g++ -DARMA_NO_DEBUG -DHAS_OPENMP -DHAS_STB -DNDEBUG -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include/stb -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -DBINDING_TYPE=BINDING_TYPE_PYX -std=gnu++11 -MD -MT src/mlpack/methods/kmeans/CMakeFiles/generate_pyx_kmeans.dir/__/__/bindings/python/print_pyx.cpp.o -MF src/mlpack/methods/kmeans/CMakeFiles/generate_pyx_kmeans.dir/__/__/bindings/python/print_pyx.cpp.o.d -o src/mlpack/methods/kmeans/CMakeFiles/generate_pyx_kmeans.dir/__/__/bindings/python/print_pyx.cpp.o -c /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/python/print_pyx.cpp
[314/628] /usr/bin/x86_64-pc-linux-gnu-g++ -DARMA_NO_DEBUG -DHAS_OPENMP -DHAS_STB -DNDEBUG -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include/stb -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -DBINDING_TYPE=BINDING_TYPE_PYX -std=gnu++11 -MD -MT src/mlpack/methods/lars/CMakeFiles/generate_pyx_lars.dir/__/__/bindings/python/print_pyx.cpp.o -MF src/mlpack/methods/lars/CMakeFiles/generate_pyx_lars.dir/__/__/bindings/python/print_pyx.cpp.o.d -o src/mlpack/methods/lars/CMakeFiles/generate_pyx_lars.dir/__/__/bindings/python/print_pyx.cpp.o -c /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/python/print_pyx.cpp
[315/628] /usr/bin/x86_64-pc-linux-gnu-g++ -DARMA_NO_DEBUG -DHAS_OPENMP -DHAS_STB -DNDEBUG -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include/stb -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -DBINDING_TYPE=BINDING_TYPE_R -std=gnu++11 -MD -MT src/mlpack/methods/lars/CMakeFiles/generate_r_lars.dir/__/__/bindings/R/build/generate_r_lars.cpp.o -MF src/mlpack/methods/lars/CMakeFiles/generate_r_lars.dir/__/__/bindings/R/build/generate_r_lars.cpp.o.d -o src/mlpack/methods/lars/CMakeFiles/generate_r_lars.dir/__/__/bindings/R/build/generate_r_lars.cpp.o -c /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/build/generate_r_lars.cpp
[316/628] : && /usr/bin/x86_64-pc-linux-gnu-g++ -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 src/mlpack/methods/lars/CMakeFiles/generate_r_lars.dir/__/__/bindings/R/build/generate_r_lars.cpp.o src/mlpack/methods/lars/CMakeFiles/generate_r_lars.dir/__/__/bindings/R/print_R.cpp.o -o src/mlpack/bindings/R/build/bin/generate_r_lars -Wl,-rpath,/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib lib/libmlpack.so.3.4 /usr/lib64/libarmadillo.so /usr/lib/gcc/x86_64-pc-linux-gnu/11.2.0/libgomp.so /usr/lib64/libpthread.so && cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/methods/lars && /usr/bin/cmake -DGENERATE_BINDING_PROGRAM=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/build/bin/generate_r_lars -DBINDING_OUTPUT_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/mlpack/R/lars.R -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/GenerateBinding.cmake
[317/628] cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/methods/linear_svm && /usr/bin/cmake -DMODEL_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/mlpack/model.txt -DPROGRAM_NAME=linear_svm -DPROGRAM_MAIN_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/methods/linear_svm/linear_svm_main.cpp -DSOURCE_DIR=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1 -DR_CPP_IN=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/R/r_method.cpp.in -DR_CPP_OUT=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/mlpack/src/linear_svm.cpp -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/R/ConfigureRCPP.cmake
[318/628] cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/methods/linear_svm && /usr/bin/cmake -DNAME=linear_svm -DGENERATE_CPP_IN=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/R/generate_R.cpp.in -DGENERATE_CPP_OUT=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/build/generate_r_linear_svm.cpp -DPROGRAM_MAIN_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/methods/linear_svm/linear_svm_main.cpp -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/ConfigureFile.cmake
[319/628] /usr/bin/x86_64-pc-linux-gnu-g++ -DARMA_NO_DEBUG -DHAS_OPENMP -DHAS_STB -DNDEBUG -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include/stb -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -DBINDING_TYPE=BINDING_TYPE_PYX -std=gnu++11 -MD -MT src/mlpack/methods/lars/CMakeFiles/generate_pyx_lars.dir/__/__/bindings/python/generate_pyx_lars.cpp.o -MF src/mlpack/methods/lars/CMakeFiles/generate_pyx_lars.dir/__/__/bindings/python/generate_pyx_lars.cpp.o.d -o src/mlpack/methods/lars/CMakeFiles/generate_pyx_lars.dir/__/__/bindings/python/generate_pyx_lars.cpp.o -c /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/generate_pyx_lars.cpp
[320/628] : && /usr/bin/x86_64-pc-linux-gnu-g++ -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 src/mlpack/methods/lars/CMakeFiles/generate_pyx_lars.dir/__/__/bindings/python/generate_pyx_lars.cpp.o src/mlpack/methods/lars/CMakeFiles/generate_pyx_lars.dir/__/__/bindings/python/print_pyx.cpp.o -o bin/generate_pyx_lars -Wl,-rpath,/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib lib/libmlpack.so.3.4 /usr/lib64/libarmadillo.so /usr/lib/gcc/x86_64-pc-linux-gnu/11.2.0/libgomp.so /usr/lib64/libpthread.so && cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/methods/lars && /usr/bin/cmake -DPROGRAM=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/bin/generate_pyx_lars -DOUTPUT_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/mlpack/lars.pyx -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/RunProgram.cmake
[321/628] /usr/bin/x86_64-pc-linux-gnu-g++ -DARMA_NO_DEBUG -DHAS_OPENMP -DHAS_STB -DNDEBUG -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include/stb -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -DBINDING_TYPE=BINDING_TYPE_R -std=gnu++11 -MD -MT src/mlpack/methods/linear_regression/CMakeFiles/generate_r_linear_regression.dir/__/__/bindings/R/print_R.cpp.o -MF src/mlpack/methods/linear_regression/CMakeFiles/generate_r_linear_regression.dir/__/__/bindings/R/print_R.cpp.o.d -o src/mlpack/methods/linear_regression/CMakeFiles/generate_r_linear_regression.dir/__/__/bindings/R/print_R.cpp.o -c /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/R/print_R.cpp
[322/628] /usr/bin/x86_64-pc-linux-gnu-g++ -DARMA_NO_DEBUG -DHAS_OPENMP -DHAS_STB -DNDEBUG -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include/stb -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -DBINDING_TYPE=BINDING_TYPE_PYX -std=gnu++11 -MD -MT src/mlpack/methods/linear_regression/CMakeFiles/generate_pyx_linear_regression.dir/__/__/bindings/python/print_pyx.cpp.o -MF src/mlpack/methods/linear_regression/CMakeFiles/generate_pyx_linear_regression.dir/__/__/bindings/python/print_pyx.cpp.o.d -o src/mlpack/methods/linear_regression/CMakeFiles/generate_pyx_linear_regression.dir/__/__/bindings/python/print_pyx.cpp.o -c /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/python/print_pyx.cpp
[323/628] /usr/bin/x86_64-pc-linux-gnu-g++ -DARMA_NO_DEBUG -DHAS_OPENMP -DHAS_STB -DNDEBUG -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include/stb -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -DBINDING_TYPE=BINDING_TYPE_R -std=gnu++11 -MD -MT src/mlpack/methods/linear_regression/CMakeFiles/generate_r_linear_regression.dir/__/__/bindings/R/build/generate_r_linear_regression.cpp.o -MF src/mlpack/methods/linear_regression/CMakeFiles/generate_r_linear_regression.dir/__/__/bindings/R/build/generate_r_linear_regression.cpp.o.d -o src/mlpack/methods/linear_regression/CMakeFiles/generate_r_linear_regression.dir/__/__/bindings/R/build/generate_r_linear_regression.cpp.o -c /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/build/generate_r_linear_regression.cpp
[324/628] cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python && /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/temp/python3.9/bin/python /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/setup.py build_ext --module=kernel_pca.pyx
running build_ext
cythoning mlpack/kernel_pca.pyx to mlpack/kernel_pca.cpp
/usr/lib/python3.9/site-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/mlpack/kernel_pca.pyx
tree = Parsing.p_module(s, pxd, full_module_name)
building 'mlpack.kernel_pca' extension
x86_64-pc-linux-gnu-g++ -pthread -Os -pipe -march=native -frecord-gcc-switches -fPIC -I/usr/lib/python3.9/site-packages/numpy/core/include -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/ -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include -I/usr/include -I/usr/include -I/usr/include/stb -I/usr/include -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -I/usr/include/python3.9 -c mlpack/kernel_pca.cpp -o build/temp.linux-x86_64-3.9/mlpack/kernel_pca.o -DBINDING_TYPE=BINDING_TYPE_PYX -std=c++11 -fopenmp -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp
In file included from /usr/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h:1969,
from /usr/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h:12,
from /usr/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h:4,
from mlpack/kernel_pca.cpp:635:
/usr/lib/python3.9/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
17 | #warning "Using deprecated NumPy API, disable it with " \
| ^~~~~~~
x86_64-pc-linux-gnu-g++ -pthread -shared -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 -Os -pipe -march=native -frecord-gcc-switches build/temp.linux-x86_64-3.9/mlpack/kernel_pca.o -L/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib -L/usr/lib64 -o build/lib.linux-x86_64-3.9/mlpack/kernel_pca.cpython-39-x86_64-linux-gnu.so -fopenmp /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib/libmlpack.so /usr/lib64/libarmadillo.so
[325/628] /usr/bin/x86_64-pc-linux-gnu-g++ -DARMA_NO_DEBUG -DHAS_OPENMP -DHAS_STB -DNDEBUG -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include/stb -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -DBINDING_TYPE=BINDING_TYPE_PYX -std=gnu++11 -MD -MT src/mlpack/methods/linear_regression/CMakeFiles/generate_pyx_linear_regression.dir/__/__/bindings/python/generate_pyx_linear_regression.cpp.o -MF src/mlpack/methods/linear_regression/CMakeFiles/generate_pyx_linear_regression.dir/__/__/bindings/python/generate_pyx_linear_regression.cpp.o.d -o src/mlpack/methods/linear_regression/CMakeFiles/generate_pyx_linear_regression.dir/__/__/bindings/python/generate_pyx_linear_regression.cpp.o -c /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/generate_pyx_linear_regression.cpp
[326/628] /usr/bin/x86_64-pc-linux-gnu-g++ -DARMA_NO_DEBUG -DHAS_OPENMP -DHAS_STB -DNDEBUG -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include/stb -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -DBINDING_TYPE=BINDING_TYPE_CLI -std=gnu++11 -MD -MT src/mlpack/methods/lars/CMakeFiles/mlpack_lars.dir/lars_main.cpp.o -MF src/mlpack/methods/lars/CMakeFiles/mlpack_lars.dir/lars_main.cpp.o.d -o src/mlpack/methods/lars/CMakeFiles/mlpack_lars.dir/lars_main.cpp.o -c /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/methods/lars/lars_main.cpp
[327/628] /usr/bin/x86_64-pc-linux-gnu-g++ -DARMA_NO_DEBUG -DHAS_OPENMP -DHAS_STB -DNDEBUG -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include/stb -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -DBINDING_TYPE=BINDING_TYPE_CLI -std=gnu++11 -MD -MT src/mlpack/methods/linear_regression/CMakeFiles/mlpack_linear_regression.dir/linear_regression_main.cpp.o -MF src/mlpack/methods/linear_regression/CMakeFiles/mlpack_linear_regression.dir/linear_regression_main.cpp.o.d -o src/mlpack/methods/linear_regression/CMakeFiles/mlpack_linear_regression.dir/linear_regression_main.cpp.o -c /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/methods/linear_regression/linear_regression_main.cpp
[328/628] /usr/bin/x86_64-pc-linux-gnu-g++ -DARMA_NO_DEBUG -DHAS_OPENMP -DHAS_STB -DNDEBUG -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include/stb -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -DBINDING_TYPE=BINDING_TYPE_R -std=gnu++11 -MD -MT src/mlpack/methods/linear_svm/CMakeFiles/generate_r_linear_svm.dir/__/__/bindings/R/build/generate_r_linear_svm.cpp.o -MF src/mlpack/methods/linear_svm/CMakeFiles/generate_r_linear_svm.dir/__/__/bindings/R/build/generate_r_linear_svm.cpp.o.d -o src/mlpack/methods/linear_svm/CMakeFiles/generate_r_linear_svm.dir/__/__/bindings/R/build/generate_r_linear_svm.cpp.o -c /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/build/generate_r_linear_svm.cpp
[329/628] /usr/bin/x86_64-pc-linux-gnu-g++ -DARMA_NO_DEBUG -DHAS_OPENMP -DHAS_STB -DNDEBUG -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include/stb -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -DBINDING_TYPE=BINDING_TYPE_PYX -std=gnu++11 -MD -MT src/mlpack/methods/kmeans/CMakeFiles/generate_pyx_kmeans.dir/__/__/bindings/python/generate_pyx_kmeans.cpp.o -MF src/mlpack/methods/kmeans/CMakeFiles/generate_pyx_kmeans.dir/__/__/bindings/python/generate_pyx_kmeans.cpp.o.d -o src/mlpack/methods/kmeans/CMakeFiles/generate_pyx_kmeans.dir/__/__/bindings/python/generate_pyx_kmeans.cpp.o -c /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/generate_pyx_kmeans.cpp
[330/628] cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/methods/linear_svm && /usr/bin/cmake -DGENERATE_CPP_IN=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/python/generate_pyx.cpp.in -DGENERATE_CPP_OUT=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/generate_pyx_linear_svm.cpp -DPROGRAM_MAIN_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/methods/linear_svm/linear_svm_main.cpp -DPROGRAM_NAME=linear_svm -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/ConfigureFile.cmake
[331/628] cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/methods/lmnn && /usr/bin/cmake -DMODEL_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/mlpack/model.txt -DPROGRAM_NAME=lmnn -DPROGRAM_MAIN_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/methods/lmnn/lmnn_main.cpp -DSOURCE_DIR=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1 -DR_CPP_IN=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/R/r_method.cpp.in -DR_CPP_OUT=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/mlpack/src/lmnn.cpp -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/R/ConfigureRCPP.cmake
[332/628] : && /usr/bin/x86_64-pc-linux-gnu-g++ -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 src/mlpack/methods/linear_regression/CMakeFiles/mlpack_linear_regression.dir/linear_regression_main.cpp.o -o bin/mlpack_linear_regression -Wl,-rpath,/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib: lib/libmlpack.so.3.4 /usr/lib64/libarmadillo.so -lpthread /usr/lib/gcc/x86_64-pc-linux-gnu/11.2.0/libgomp.so /usr/lib64/libpthread.so && :
[333/628] cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/methods/lmnn && /usr/bin/cmake -DNAME=lmnn -DGENERATE_CPP_IN=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/R/generate_R.cpp.in -DGENERATE_CPP_OUT=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/build/generate_r_lmnn.cpp -DPROGRAM_MAIN_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/methods/lmnn/lmnn_main.cpp -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/ConfigureFile.cmake
[334/628] : && /usr/bin/x86_64-pc-linux-gnu-g++ -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 src/mlpack/methods/linear_regression/CMakeFiles/generate_pyx_linear_regression.dir/__/__/bindings/python/generate_pyx_linear_regression.cpp.o src/mlpack/methods/linear_regression/CMakeFiles/generate_pyx_linear_regression.dir/__/__/bindings/python/print_pyx.cpp.o -o bin/generate_pyx_linear_regression -Wl,-rpath,/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib lib/libmlpack.so.3.4 /usr/lib64/libarmadillo.so /usr/lib/gcc/x86_64-pc-linux-gnu/11.2.0/libgomp.so /usr/lib64/libpthread.so && cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/methods/linear_regression && /usr/bin/cmake -DPROGRAM=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/bin/generate_pyx_linear_regression -DOUTPUT_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/mlpack/linear_regression.pyx -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/RunProgram.cmake
[335/628] : && /usr/bin/x86_64-pc-linux-gnu-g++ -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 src/mlpack/methods/linear_regression/CMakeFiles/generate_r_linear_regression.dir/__/__/bindings/R/build/generate_r_linear_regression.cpp.o src/mlpack/methods/linear_regression/CMakeFiles/generate_r_linear_regression.dir/__/__/bindings/R/print_R.cpp.o -o src/mlpack/bindings/R/build/bin/generate_r_linear_regression -Wl,-rpath,/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib lib/libmlpack.so.3.4 /usr/lib64/libarmadillo.so /usr/lib/gcc/x86_64-pc-linux-gnu/11.2.0/libgomp.so /usr/lib64/libpthread.so && cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/methods/linear_regression && /usr/bin/cmake -DGENERATE_BINDING_PROGRAM=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/build/bin/generate_r_linear_regression -DBINDING_OUTPUT_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/mlpack/R/linear_regression.R -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/GenerateBinding.cmake
[336/628] : && /usr/bin/x86_64-pc-linux-gnu-g++ -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 src/mlpack/methods/lars/CMakeFiles/mlpack_lars.dir/lars_main.cpp.o -o bin/mlpack_lars -Wl,-rpath,/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib: lib/libmlpack.so.3.4 /usr/lib64/libarmadillo.so -lpthread /usr/lib/gcc/x86_64-pc-linux-gnu/11.2.0/libgomp.so /usr/lib64/libpthread.so && :
[337/628] : && /usr/bin/x86_64-pc-linux-gnu-g++ -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 src/mlpack/methods/kmeans/CMakeFiles/generate_pyx_kmeans.dir/__/__/bindings/python/generate_pyx_kmeans.cpp.o src/mlpack/methods/kmeans/CMakeFiles/generate_pyx_kmeans.dir/__/__/bindings/python/print_pyx.cpp.o -o bin/generate_pyx_kmeans -Wl,-rpath,/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib lib/libmlpack.so.3.4 /usr/lib64/libarmadillo.so /usr/lib/gcc/x86_64-pc-linux-gnu/11.2.0/libgomp.so /usr/lib64/libpthread.so && cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/methods/kmeans && /usr/bin/cmake -DPROGRAM=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/bin/generate_pyx_kmeans -DOUTPUT_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/mlpack/kmeans.pyx -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/RunProgram.cmake
[338/628] cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/methods/lmnn && /usr/bin/cmake -DGENERATE_CPP_IN=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/python/generate_pyx.cpp.in -DGENERATE_CPP_OUT=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/generate_pyx_lmnn.cpp -DPROGRAM_MAIN_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/methods/lmnn/lmnn_main.cpp -DPROGRAM_NAME=lmnn -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/ConfigureFile.cmake
[339/628] cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python && /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/temp/python3.9/bin/python /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/setup.py build_ext --module=lars.pyx
running build_ext
cythoning mlpack/lars.pyx to mlpack/lars.cpp
/usr/lib/python3.9/site-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/mlpack/lars.pyx
tree = Parsing.p_module(s, pxd, full_module_name)
building 'mlpack.lars' extension
x86_64-pc-linux-gnu-g++ -pthread -Os -pipe -march=native -frecord-gcc-switches -fPIC -I/usr/lib/python3.9/site-packages/numpy/core/include -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/ -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include -I/usr/include -I/usr/include -I/usr/include/stb -I/usr/include -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -I/usr/include/python3.9 -c mlpack/lars.cpp -o build/temp.linux-x86_64-3.9/mlpack/lars.o -DBINDING_TYPE=BINDING_TYPE_PYX -std=c++11 -fopenmp -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp
In file included from /usr/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h:1969,
from /usr/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h:12,
from /usr/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h:4,
from mlpack/lars.cpp:635:
/usr/lib/python3.9/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
17 | #warning "Using deprecated NumPy API, disable it with " \
| ^~~~~~~
x86_64-pc-linux-gnu-g++ -pthread -shared -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 -Os -pipe -march=native -frecord-gcc-switches build/temp.linux-x86_64-3.9/mlpack/lars.o -L/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib -L/usr/lib64 -o build/lib.linux-x86_64-3.9/mlpack/lars.cpython-39-x86_64-linux-gnu.so -fopenmp /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib/libmlpack.so /usr/lib64/libarmadillo.so
[340/628] cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python && /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/temp/python3.9/bin/python /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/setup.py build_ext --module=kde.pyx
running build_ext
cythoning mlpack/kde.pyx to mlpack/kde.cpp
/usr/lib/python3.9/site-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/mlpack/kde.pyx
tree = Parsing.p_module(s, pxd, full_module_name)
building 'mlpack.kde' extension
x86_64-pc-linux-gnu-g++ -pthread -Os -pipe -march=native -frecord-gcc-switches -fPIC -I/usr/lib/python3.9/site-packages/numpy/core/include -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/ -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include -I/usr/include -I/usr/include -I/usr/include/stb -I/usr/include -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -I/usr/include/python3.9 -c mlpack/kde.cpp -o build/temp.linux-x86_64-3.9/mlpack/kde.o -DBINDING_TYPE=BINDING_TYPE_PYX -std=c++11 -fopenmp -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp
In file included from /usr/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h:1969,
from /usr/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h:12,
from /usr/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h:4,
from mlpack/kde.cpp:635:
/usr/lib/python3.9/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
17 | #warning "Using deprecated NumPy API, disable it with " \
| ^~~~~~~
x86_64-pc-linux-gnu-g++ -pthread -shared -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 -Os -pipe -march=native -frecord-gcc-switches build/temp.linux-x86_64-3.9/mlpack/kde.o -L/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib -L/usr/lib64 -o build/lib.linux-x86_64-3.9/mlpack/kde.cpython-39-x86_64-linux-gnu.so -fopenmp /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib/libmlpack.so /usr/lib64/libarmadillo.so
[341/628] /usr/bin/x86_64-pc-linux-gnu-g++ -DARMA_NO_DEBUG -DHAS_OPENMP -DHAS_STB -DNDEBUG -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include/stb -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -DBINDING_TYPE=BINDING_TYPE_CLI -std=gnu++11 -MD -MT src/mlpack/methods/linear_svm/CMakeFiles/mlpack_linear_svm.dir/linear_svm_main.cpp.o -MF src/mlpack/methods/linear_svm/CMakeFiles/mlpack_linear_svm.dir/linear_svm_main.cpp.o.d -o src/mlpack/methods/linear_svm/CMakeFiles/mlpack_linear_svm.dir/linear_svm_main.cpp.o -c /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/methods/linear_svm/linear_svm_main.cpp
[342/628] : && /usr/bin/x86_64-pc-linux-gnu-g++ -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 src/mlpack/methods/linear_svm/CMakeFiles/mlpack_linear_svm.dir/linear_svm_main.cpp.o -o bin/mlpack_linear_svm -Wl,-rpath,/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib: lib/libmlpack.so.3.4 /usr/lib64/libarmadillo.so -lpthread /usr/lib/gcc/x86_64-pc-linux-gnu/11.2.0/libgomp.so /usr/lib64/libpthread.so && :
[343/628] cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/methods/local_coordinate_coding && /usr/bin/cmake -DMODEL_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/mlpack/model.txt -DPROGRAM_NAME=local_coordinate_coding -DPROGRAM_MAIN_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/methods/local_coordinate_coding/local_coordinate_coding_main.cpp -DSOURCE_DIR=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1 -DR_CPP_IN=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/R/r_method.cpp.in -DR_CPP_OUT=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/mlpack/src/local_coordinate_coding.cpp -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/R/ConfigureRCPP.cmake
[344/628] cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/methods/local_coordinate_coding && /usr/bin/cmake -DNAME=local_coordinate_coding -DGENERATE_CPP_IN=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/R/generate_R.cpp.in -DGENERATE_CPP_OUT=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/build/generate_r_local_coordinate_coding.cpp -DPROGRAM_MAIN_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/methods/local_coordinate_coding/local_coordinate_coding_main.cpp -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/ConfigureFile.cmake
[345/628] /usr/bin/x86_64-pc-linux-gnu-g++ -DARMA_NO_DEBUG -DHAS_OPENMP -DHAS_STB -DNDEBUG -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include/stb -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -DBINDING_TYPE=BINDING_TYPE_R -std=gnu++11 -MD -MT src/mlpack/methods/linear_svm/CMakeFiles/generate_r_linear_svm.dir/__/__/bindings/R/print_R.cpp.o -MF src/mlpack/methods/linear_svm/CMakeFiles/generate_r_linear_svm.dir/__/__/bindings/R/print_R.cpp.o.d -o src/mlpack/methods/linear_svm/CMakeFiles/generate_r_linear_svm.dir/__/__/bindings/R/print_R.cpp.o -c /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/R/print_R.cpp
[346/628] : && /usr/bin/x86_64-pc-linux-gnu-g++ -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 src/mlpack/methods/linear_svm/CMakeFiles/generate_r_linear_svm.dir/__/__/bindings/R/build/generate_r_linear_svm.cpp.o src/mlpack/methods/linear_svm/CMakeFiles/generate_r_linear_svm.dir/__/__/bindings/R/print_R.cpp.o -o src/mlpack/bindings/R/build/bin/generate_r_linear_svm -Wl,-rpath,/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib lib/libmlpack.so.3.4 /usr/lib64/libarmadillo.so /usr/lib/gcc/x86_64-pc-linux-gnu/11.2.0/libgomp.so /usr/lib64/libpthread.so && cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/methods/linear_svm && /usr/bin/cmake -DGENERATE_BINDING_PROGRAM=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/build/bin/generate_r_linear_svm -DBINDING_OUTPUT_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/mlpack/R/linear_svm.R -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/GenerateBinding.cmake
[347/628] /usr/bin/x86_64-pc-linux-gnu-g++ -DARMA_NO_DEBUG -DHAS_OPENMP -DHAS_STB -DNDEBUG -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include/stb -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -DBINDING_TYPE=BINDING_TYPE_R -std=gnu++11 -MD -MT src/mlpack/methods/lmnn/CMakeFiles/generate_r_lmnn.dir/__/__/bindings/R/print_R.cpp.o -MF src/mlpack/methods/lmnn/CMakeFiles/generate_r_lmnn.dir/__/__/bindings/R/print_R.cpp.o.d -o src/mlpack/methods/lmnn/CMakeFiles/generate_r_lmnn.dir/__/__/bindings/R/print_R.cpp.o -c /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/R/print_R.cpp
[348/628] cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/methods/local_coordinate_coding && /usr/bin/cmake -DGENERATE_CPP_IN=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/python/generate_pyx.cpp.in -DGENERATE_CPP_OUT=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/generate_pyx_local_coordinate_coding.cpp -DPROGRAM_MAIN_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/methods/local_coordinate_coding/local_coordinate_coding_main.cpp -DPROGRAM_NAME=local_coordinate_coding -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/ConfigureFile.cmake
[349/628] /usr/bin/x86_64-pc-linux-gnu-g++ -DARMA_NO_DEBUG -DHAS_OPENMP -DHAS_STB -DNDEBUG -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include/stb -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -DBINDING_TYPE=BINDING_TYPE_PYX -std=gnu++11 -MD -MT src/mlpack/methods/linear_svm/CMakeFiles/generate_pyx_linear_svm.dir/__/__/bindings/python/print_pyx.cpp.o -MF src/mlpack/methods/linear_svm/CMakeFiles/generate_pyx_linear_svm.dir/__/__/bindings/python/print_pyx.cpp.o.d -o src/mlpack/methods/linear_svm/CMakeFiles/generate_pyx_linear_svm.dir/__/__/bindings/python/print_pyx.cpp.o -c /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/python/print_pyx.cpp
[350/628] /usr/bin/x86_64-pc-linux-gnu-g++ -DARMA_NO_DEBUG -DHAS_OPENMP -DHAS_STB -DNDEBUG -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include/stb -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -DBINDING_TYPE=BINDING_TYPE_PYX -std=gnu++11 -MD -MT src/mlpack/methods/lmnn/CMakeFiles/generate_pyx_lmnn.dir/__/__/bindings/python/print_pyx.cpp.o -MF src/mlpack/methods/lmnn/CMakeFiles/generate_pyx_lmnn.dir/__/__/bindings/python/print_pyx.cpp.o.d -o src/mlpack/methods/lmnn/CMakeFiles/generate_pyx_lmnn.dir/__/__/bindings/python/print_pyx.cpp.o -c /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/python/print_pyx.cpp
[351/628] /usr/bin/x86_64-pc-linux-gnu-g++ -DARMA_NO_DEBUG -DHAS_OPENMP -DHAS_STB -DNDEBUG -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include/stb -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -DBINDING_TYPE=BINDING_TYPE_PYX -std=gnu++11 -MD -MT src/mlpack/methods/linear_svm/CMakeFiles/generate_pyx_linear_svm.dir/__/__/bindings/python/generate_pyx_linear_svm.cpp.o -MF src/mlpack/methods/linear_svm/CMakeFiles/generate_pyx_linear_svm.dir/__/__/bindings/python/generate_pyx_linear_svm.cpp.o.d -o src/mlpack/methods/linear_svm/CMakeFiles/generate_pyx_linear_svm.dir/__/__/bindings/python/generate_pyx_linear_svm.cpp.o -c /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/generate_pyx_linear_svm.cpp
[352/628] cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python && /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/temp/python3.9/bin/python /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/setup.py build_ext --module=linear_regression.pyx
running build_ext
cythoning mlpack/linear_regression.pyx to mlpack/linear_regression.cpp
/usr/lib/python3.9/site-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/mlpack/linear_regression.pyx
tree = Parsing.p_module(s, pxd, full_module_name)
building 'mlpack.linear_regression' extension
x86_64-pc-linux-gnu-g++ -pthread -Os -pipe -march=native -frecord-gcc-switches -fPIC -I/usr/lib/python3.9/site-packages/numpy/core/include -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/ -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include -I/usr/include -I/usr/include -I/usr/include/stb -I/usr/include -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -I/usr/include/python3.9 -c mlpack/linear_regression.cpp -o build/temp.linux-x86_64-3.9/mlpack/linear_regression.o -DBINDING_TYPE=BINDING_TYPE_PYX -std=c++11 -fopenmp -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp
In file included from /usr/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h:1969,
from /usr/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h:12,
from /usr/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h:4,
from mlpack/linear_regression.cpp:635:
/usr/lib/python3.9/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
17 | #warning "Using deprecated NumPy API, disable it with " \
| ^~~~~~~
x86_64-pc-linux-gnu-g++ -pthread -shared -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 -Os -pipe -march=native -frecord-gcc-switches build/temp.linux-x86_64-3.9/mlpack/linear_regression.o -L/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib -L/usr/lib64 -o build/lib.linux-x86_64-3.9/mlpack/linear_regression.cpython-39-x86_64-linux-gnu.so -fopenmp /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib/libmlpack.so /usr/lib64/libarmadillo.so
[353/628] /usr/bin/x86_64-pc-linux-gnu-g++ -DARMA_NO_DEBUG -DHAS_OPENMP -DHAS_STB -DNDEBUG -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include/stb -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -DBINDING_TYPE=BINDING_TYPE_R -std=gnu++11 -MD -MT src/mlpack/methods/local_coordinate_coding/CMakeFiles/generate_r_local_coordinate_coding.dir/__/__/bindings/R/print_R.cpp.o -MF src/mlpack/methods/local_coordinate_coding/CMakeFiles/generate_r_local_coordinate_coding.dir/__/__/bindings/R/print_R.cpp.o.d -o src/mlpack/methods/local_coordinate_coding/CMakeFiles/generate_r_local_coordinate_coding.dir/__/__/bindings/R/print_R.cpp.o -c /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/R/print_R.cpp
[354/628] /usr/bin/x86_64-pc-linux-gnu-g++ -DARMA_NO_DEBUG -DHAS_OPENMP -DHAS_STB -DNDEBUG -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include/stb -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -DBINDING_TYPE=BINDING_TYPE_R -std=gnu++11 -MD -MT src/mlpack/methods/lmnn/CMakeFiles/generate_r_lmnn.dir/__/__/bindings/R/build/generate_r_lmnn.cpp.o -MF src/mlpack/methods/lmnn/CMakeFiles/generate_r_lmnn.dir/__/__/bindings/R/build/generate_r_lmnn.cpp.o.d -o src/mlpack/methods/lmnn/CMakeFiles/generate_r_lmnn.dir/__/__/bindings/R/build/generate_r_lmnn.cpp.o -c /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/build/generate_r_lmnn.cpp
[355/628] /usr/bin/x86_64-pc-linux-gnu-g++ -DARMA_NO_DEBUG -DHAS_OPENMP -DHAS_STB -DNDEBUG -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include/stb -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -DBINDING_TYPE=BINDING_TYPE_PYX -std=gnu++11 -MD -MT src/mlpack/methods/lmnn/CMakeFiles/generate_pyx_lmnn.dir/__/__/bindings/python/generate_pyx_lmnn.cpp.o -MF src/mlpack/methods/lmnn/CMakeFiles/generate_pyx_lmnn.dir/__/__/bindings/python/generate_pyx_lmnn.cpp.o.d -o src/mlpack/methods/lmnn/CMakeFiles/generate_pyx_lmnn.dir/__/__/bindings/python/generate_pyx_lmnn.cpp.o -c /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/generate_pyx_lmnn.cpp
[356/628] /usr/bin/x86_64-pc-linux-gnu-g++ -DARMA_NO_DEBUG -DHAS_OPENMP -DHAS_STB -DNDEBUG -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include/stb -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -DBINDING_TYPE=BINDING_TYPE_R -std=gnu++11 -MD -MT src/mlpack/methods/local_coordinate_coding/CMakeFiles/generate_r_local_coordinate_coding.dir/__/__/bindings/R/build/generate_r_local_coordinate_coding.cpp.o -MF src/mlpack/methods/local_coordinate_coding/CMakeFiles/generate_r_local_coordinate_coding.dir/__/__/bindings/R/build/generate_r_local_coordinate_coding.cpp.o.d -o src/mlpack/methods/local_coordinate_coding/CMakeFiles/generate_r_local_coordinate_coding.dir/__/__/bindings/R/build/generate_r_local_coordinate_coding.cpp.o -c /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/build/generate_r_local_coordinate_coding.cpp
[357/628] /usr/bin/x86_64-pc-linux-gnu-g++ -DARMA_NO_DEBUG -DHAS_OPENMP -DHAS_STB -DNDEBUG -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include/stb -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -DBINDING_TYPE=BINDING_TYPE_PYX -std=gnu++11 -MD -MT src/mlpack/methods/local_coordinate_coding/CMakeFiles/generate_pyx_local_coordinate_coding.dir/__/__/bindings/python/generate_pyx_local_coordinate_coding.cpp.o -MF src/mlpack/methods/local_coordinate_coding/CMakeFiles/generate_pyx_local_coordinate_coding.dir/__/__/bindings/python/generate_pyx_local_coordinate_coding.cpp.o.d -o src/mlpack/methods/local_coordinate_coding/CMakeFiles/generate_pyx_local_coordinate_coding.dir/__/__/bindings/python/generate_pyx_local_coordinate_coding.cpp.o -c /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/generate_pyx_local_coordinate_coding.cpp
[358/628] /usr/bin/x86_64-pc-linux-gnu-g++ -DARMA_NO_DEBUG -DHAS_OPENMP -DHAS_STB -DNDEBUG -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include/stb -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -DBINDING_TYPE=BINDING_TYPE_CLI -std=gnu++11 -MD -MT src/mlpack/methods/lmnn/CMakeFiles/mlpack_lmnn.dir/lmnn_main.cpp.o -MF src/mlpack/methods/lmnn/CMakeFiles/mlpack_lmnn.dir/lmnn_main.cpp.o.d -o src/mlpack/methods/lmnn/CMakeFiles/mlpack_lmnn.dir/lmnn_main.cpp.o -c /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/methods/lmnn/lmnn_main.cpp
[359/628] /usr/bin/x86_64-pc-linux-gnu-g++ -DARMA_NO_DEBUG -DHAS_OPENMP -DHAS_STB -DNDEBUG -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include/stb -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -DBINDING_TYPE=BINDING_TYPE_CLI -std=gnu++11 -MD -MT src/mlpack/methods/local_coordinate_coding/CMakeFiles/mlpack_local_coordinate_coding.dir/local_coordinate_coding_main.cpp.o -MF src/mlpack/methods/local_coordinate_coding/CMakeFiles/mlpack_local_coordinate_coding.dir/local_coordinate_coding_main.cpp.o.d -o src/mlpack/methods/local_coordinate_coding/CMakeFiles/mlpack_local_coordinate_coding.dir/local_coordinate_coding_main.cpp.o -c /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/methods/local_coordinate_coding/local_coordinate_coding_main.cpp
[360/628] cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/methods/logistic_regression && /usr/bin/cmake -DGENERATE_CPP_IN=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/python/generate_pyx.cpp.in -DGENERATE_CPP_OUT=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/generate_pyx_logistic_regression.cpp -DPROGRAM_MAIN_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/methods/logistic_regression/logistic_regression_main.cpp -DPROGRAM_NAME=logistic_regression -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/ConfigureFile.cmake
[361/628] cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/methods/logistic_regression && /usr/bin/cmake -DMODEL_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/mlpack/model.txt -DPROGRAM_NAME=logistic_regression -DPROGRAM_MAIN_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/methods/logistic_regression/logistic_regression_main.cpp -DSOURCE_DIR=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1 -DR_CPP_IN=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/R/r_method.cpp.in -DR_CPP_OUT=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/mlpack/src/logistic_regression.cpp -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/R/ConfigureRCPP.cmake
[362/628] : && /usr/bin/x86_64-pc-linux-gnu-g++ -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 src/mlpack/methods/lmnn/CMakeFiles/generate_r_lmnn.dir/__/__/bindings/R/build/generate_r_lmnn.cpp.o src/mlpack/methods/lmnn/CMakeFiles/generate_r_lmnn.dir/__/__/bindings/R/print_R.cpp.o -o src/mlpack/bindings/R/build/bin/generate_r_lmnn -Wl,-rpath,/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib lib/libmlpack.so.3.4 /usr/lib64/libarmadillo.so /usr/lib/gcc/x86_64-pc-linux-gnu/11.2.0/libgomp.so /usr/lib64/libpthread.so && cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/methods/lmnn && /usr/bin/cmake -DGENERATE_BINDING_PROGRAM=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/build/bin/generate_r_lmnn -DBINDING_OUTPUT_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/mlpack/R/lmnn.R -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/GenerateBinding.cmake
[363/628] : && /usr/bin/x86_64-pc-linux-gnu-g++ -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 src/mlpack/methods/local_coordinate_coding/CMakeFiles/generate_r_local_coordinate_coding.dir/__/__/bindings/R/build/generate_r_local_coordinate_coding.cpp.o src/mlpack/methods/local_coordinate_coding/CMakeFiles/generate_r_local_coordinate_coding.dir/__/__/bindings/R/print_R.cpp.o -o src/mlpack/bindings/R/build/bin/generate_r_local_coordinate_coding -Wl,-rpath,/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib lib/libmlpack.so.3.4 /usr/lib64/libarmadillo.so /usr/lib/gcc/x86_64-pc-linux-gnu/11.2.0/libgomp.so /usr/lib64/libpthread.so && cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/methods/local_coordinate_coding && /usr/bin/cmake -DGENERATE_BINDING_PROGRAM=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/build/bin/generate_r_local_coordinate_coding -DBINDING_OUTPUT_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/mlpack/R/local_coordinate_coding.R -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/GenerateBinding.cmake
[364/628] : && /usr/bin/x86_64-pc-linux-gnu-g++ -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 src/mlpack/methods/lmnn/CMakeFiles/generate_pyx_lmnn.dir/__/__/bindings/python/generate_pyx_lmnn.cpp.o src/mlpack/methods/lmnn/CMakeFiles/generate_pyx_lmnn.dir/__/__/bindings/python/print_pyx.cpp.o -o bin/generate_pyx_lmnn -Wl,-rpath,/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib lib/libmlpack.so.3.4 /usr/lib64/libarmadillo.so /usr/lib/gcc/x86_64-pc-linux-gnu/11.2.0/libgomp.so /usr/lib64/libpthread.so && cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/methods/lmnn && /usr/bin/cmake -DPROGRAM=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/bin/generate_pyx_lmnn -DOUTPUT_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/mlpack/lmnn.pyx -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/RunProgram.cmake
[365/628] cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/methods/logistic_regression && /usr/bin/cmake -DNAME=logistic_regression -DGENERATE_CPP_IN=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/R/generate_R.cpp.in -DGENERATE_CPP_OUT=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/build/generate_r_logistic_regression.cpp -DPROGRAM_MAIN_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/methods/logistic_regression/logistic_regression_main.cpp -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/ConfigureFile.cmake
[366/628] cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/methods/lsh && /usr/bin/cmake -DMODEL_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/mlpack/model.txt -DPROGRAM_NAME=lsh -DPROGRAM_MAIN_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/methods/lsh/lsh_main.cpp -DSOURCE_DIR=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1 -DR_CPP_IN=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/R/r_method.cpp.in -DR_CPP_OUT=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/mlpack/src/lsh.cpp -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/R/ConfigureRCPP.cmake
[367/628] : && /usr/bin/x86_64-pc-linux-gnu-g++ -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 src/mlpack/methods/linear_svm/CMakeFiles/generate_pyx_linear_svm.dir/__/__/bindings/python/generate_pyx_linear_svm.cpp.o src/mlpack/methods/linear_svm/CMakeFiles/generate_pyx_linear_svm.dir/__/__/bindings/python/print_pyx.cpp.o -o bin/generate_pyx_linear_svm -Wl,-rpath,/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib lib/libmlpack.so.3.4 /usr/lib64/libarmadillo.so /usr/lib/gcc/x86_64-pc-linux-gnu/11.2.0/libgomp.so /usr/lib64/libpthread.so && cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/methods/linear_svm && /usr/bin/cmake -DPROGRAM=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/bin/generate_pyx_linear_svm -DOUTPUT_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/mlpack/linear_svm.pyx -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/RunProgram.cmake
[368/628] : && /usr/bin/x86_64-pc-linux-gnu-g++ -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 src/mlpack/methods/local_coordinate_coding/CMakeFiles/mlpack_local_coordinate_coding.dir/local_coordinate_coding_main.cpp.o -o bin/mlpack_local_coordinate_coding -Wl,-rpath,/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib: lib/libmlpack.so.3.4 /usr/lib64/libarmadillo.so -lpthread /usr/lib/gcc/x86_64-pc-linux-gnu/11.2.0/libgomp.so /usr/lib64/libpthread.so && :
[369/628] : && /usr/bin/x86_64-pc-linux-gnu-g++ -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 src/mlpack/methods/lmnn/CMakeFiles/mlpack_lmnn.dir/lmnn_main.cpp.o -o bin/mlpack_lmnn -Wl,-rpath,/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib: lib/libmlpack.so.3.4 /usr/lib64/libarmadillo.so -lpthread /usr/lib/gcc/x86_64-pc-linux-gnu/11.2.0/libgomp.so /usr/lib64/libpthread.so && :
[370/628] cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/methods/lsh && /usr/bin/cmake -DNAME=lsh -DGENERATE_CPP_IN=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/R/generate_R.cpp.in -DGENERATE_CPP_OUT=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/build/generate_r_lsh.cpp -DPROGRAM_MAIN_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/methods/lsh/lsh_main.cpp -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/ConfigureFile.cmake
[371/628] cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/methods/lsh && /usr/bin/cmake -DGENERATE_CPP_IN=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/python/generate_pyx.cpp.in -DGENERATE_CPP_OUT=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/generate_pyx_lsh.cpp -DPROGRAM_MAIN_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/methods/lsh/lsh_main.cpp -DPROGRAM_NAME=lsh -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/ConfigureFile.cmake
[372/628] cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python && /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/temp/python3.9/bin/python /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/setup.py build_ext --module=kmeans.pyx
running build_ext
cythoning mlpack/kmeans.pyx to mlpack/kmeans.cpp
/usr/lib/python3.9/site-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/mlpack/kmeans.pyx
tree = Parsing.p_module(s, pxd, full_module_name)
building 'mlpack.kmeans' extension
x86_64-pc-linux-gnu-g++ -pthread -Os -pipe -march=native -frecord-gcc-switches -fPIC -I/usr/lib/python3.9/site-packages/numpy/core/include -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/ -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include -I/usr/include -I/usr/include -I/usr/include/stb -I/usr/include -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -I/usr/include/python3.9 -c mlpack/kmeans.cpp -o build/temp.linux-x86_64-3.9/mlpack/kmeans.o -DBINDING_TYPE=BINDING_TYPE_PYX -std=c++11 -fopenmp -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp
In file included from /usr/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h:1969,
from /usr/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h:12,
from /usr/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h:4,
from mlpack/kmeans.cpp:635:
/usr/lib/python3.9/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
17 | #warning "Using deprecated NumPy API, disable it with " \
| ^~~~~~~
x86_64-pc-linux-gnu-g++ -pthread -shared -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 -Os -pipe -march=native -frecord-gcc-switches build/temp.linux-x86_64-3.9/mlpack/kmeans.o -L/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib -L/usr/lib64 -o build/lib.linux-x86_64-3.9/mlpack/kmeans.cpython-39-x86_64-linux-gnu.so -fopenmp /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib/libmlpack.so /usr/lib64/libarmadillo.so
[373/628] /usr/bin/x86_64-pc-linux-gnu-g++ -DARMA_NO_DEBUG -DHAS_OPENMP -DHAS_STB -DNDEBUG -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include/stb -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -DBINDING_TYPE=BINDING_TYPE_PYX -std=gnu++11 -MD -MT src/mlpack/methods/local_coordinate_coding/CMakeFiles/generate_pyx_local_coordinate_coding.dir/__/__/bindings/python/print_pyx.cpp.o -MF src/mlpack/methods/local_coordinate_coding/CMakeFiles/generate_pyx_local_coordinate_coding.dir/__/__/bindings/python/print_pyx.cpp.o.d -o src/mlpack/methods/local_coordinate_coding/CMakeFiles/generate_pyx_local_coordinate_coding.dir/__/__/bindings/python/print_pyx.cpp.o -c /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/python/print_pyx.cpp
[374/628] /usr/bin/x86_64-pc-linux-gnu-g++ -DARMA_NO_DEBUG -DHAS_OPENMP -DHAS_STB -DNDEBUG -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include/stb -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -DBINDING_TYPE=BINDING_TYPE_R -std=gnu++11 -MD -MT src/mlpack/methods/lsh/CMakeFiles/generate_r_lsh.dir/__/__/bindings/R/print_R.cpp.o -MF src/mlpack/methods/lsh/CMakeFiles/generate_r_lsh.dir/__/__/bindings/R/print_R.cpp.o.d -o src/mlpack/methods/lsh/CMakeFiles/generate_r_lsh.dir/__/__/bindings/R/print_R.cpp.o -c /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/R/print_R.cpp
[375/628] /usr/bin/x86_64-pc-linux-gnu-g++ -DARMA_NO_DEBUG -DHAS_OPENMP -DHAS_STB -DNDEBUG -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include/stb -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -DBINDING_TYPE=BINDING_TYPE_R -std=gnu++11 -MD -MT src/mlpack/methods/logistic_regression/CMakeFiles/generate_r_logistic_regression.dir/__/__/bindings/R/print_R.cpp.o -MF src/mlpack/methods/logistic_regression/CMakeFiles/generate_r_logistic_regression.dir/__/__/bindings/R/print_R.cpp.o.d -o src/mlpack/methods/logistic_regression/CMakeFiles/generate_r_logistic_regression.dir/__/__/bindings/R/print_R.cpp.o -c /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/R/print_R.cpp
[376/628] /usr/bin/x86_64-pc-linux-gnu-g++ -DARMA_NO_DEBUG -DHAS_OPENMP -DHAS_STB -DNDEBUG -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include/stb -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -DBINDING_TYPE=BINDING_TYPE_PYX -std=gnu++11 -MD -MT src/mlpack/methods/logistic_regression/CMakeFiles/generate_pyx_logistic_regression.dir/__/__/bindings/python/print_pyx.cpp.o -MF src/mlpack/methods/logistic_regression/CMakeFiles/generate_pyx_logistic_regression.dir/__/__/bindings/python/print_pyx.cpp.o.d -o src/mlpack/methods/logistic_regression/CMakeFiles/generate_pyx_logistic_regression.dir/__/__/bindings/python/print_pyx.cpp.o -c /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/python/print_pyx.cpp
[377/628] /usr/bin/x86_64-pc-linux-gnu-g++ -DARMA_NO_DEBUG -DHAS_OPENMP -DHAS_STB -DNDEBUG -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include/stb -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -DBINDING_TYPE=BINDING_TYPE_R -std=gnu++11 -MD -MT src/mlpack/methods/lsh/CMakeFiles/generate_r_lsh.dir/__/__/bindings/R/build/generate_r_lsh.cpp.o -MF src/mlpack/methods/lsh/CMakeFiles/generate_r_lsh.dir/__/__/bindings/R/build/generate_r_lsh.cpp.o.d -o src/mlpack/methods/lsh/CMakeFiles/generate_r_lsh.dir/__/__/bindings/R/build/generate_r_lsh.cpp.o -c /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/build/generate_r_lsh.cpp
[378/628] /usr/bin/x86_64-pc-linux-gnu-g++ -DARMA_NO_DEBUG -DHAS_OPENMP -DHAS_STB -DNDEBUG -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include/stb -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -DBINDING_TYPE=BINDING_TYPE_R -std=gnu++11 -MD -MT src/mlpack/methods/logistic_regression/CMakeFiles/generate_r_logistic_regression.dir/__/__/bindings/R/build/generate_r_logistic_regression.cpp.o -MF src/mlpack/methods/logistic_regression/CMakeFiles/generate_r_logistic_regression.dir/__/__/bindings/R/build/generate_r_logistic_regression.cpp.o.d -o src/mlpack/methods/logistic_regression/CMakeFiles/generate_r_logistic_regression.dir/__/__/bindings/R/build/generate_r_logistic_regression.cpp.o -c /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/build/generate_r_logistic_regression.cpp
[379/628] /usr/bin/x86_64-pc-linux-gnu-g++ -DARMA_NO_DEBUG -DHAS_OPENMP -DHAS_STB -DNDEBUG -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include/stb -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -DBINDING_TYPE=BINDING_TYPE_PYX -std=gnu++11 -MD -MT src/mlpack/methods/logistic_regression/CMakeFiles/generate_pyx_logistic_regression.dir/__/__/bindings/python/generate_pyx_logistic_regression.cpp.o -MF src/mlpack/methods/logistic_regression/CMakeFiles/generate_pyx_logistic_regression.dir/__/__/bindings/python/generate_pyx_logistic_regression.cpp.o.d -o src/mlpack/methods/logistic_regression/CMakeFiles/generate_pyx_logistic_regression.dir/__/__/bindings/python/generate_pyx_logistic_regression.cpp.o -c /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/generate_pyx_logistic_regression.cpp
[380/628] /usr/bin/x86_64-pc-linux-gnu-g++ -DARMA_NO_DEBUG -DHAS_OPENMP -DHAS_STB -DNDEBUG -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include/stb -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -DBINDING_TYPE=BINDING_TYPE_PYX -std=gnu++11 -MD -MT src/mlpack/methods/lsh/CMakeFiles/generate_pyx_lsh.dir/__/__/bindings/python/generate_pyx_lsh.cpp.o -MF src/mlpack/methods/lsh/CMakeFiles/generate_pyx_lsh.dir/__/__/bindings/python/generate_pyx_lsh.cpp.o.d -o src/mlpack/methods/lsh/CMakeFiles/generate_pyx_lsh.dir/__/__/bindings/python/generate_pyx_lsh.cpp.o -c /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/generate_pyx_lsh.cpp
[381/628] cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/methods/mean_shift && /usr/bin/cmake -DMODEL_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/mlpack/model.txt -DPROGRAM_NAME=mean_shift -DPROGRAM_MAIN_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/methods/mean_shift/mean_shift_main.cpp -DSOURCE_DIR=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1 -DR_CPP_IN=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/R/r_method.cpp.in -DR_CPP_OUT=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/mlpack/src/mean_shift.cpp -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/R/ConfigureRCPP.cmake
[382/628] cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/methods/mean_shift && /usr/bin/cmake -DGENERATE_CPP_IN=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/python/generate_pyx.cpp.in -DGENERATE_CPP_OUT=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/generate_pyx_mean_shift.cpp -DPROGRAM_MAIN_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/methods/mean_shift/mean_shift_main.cpp -DPROGRAM_NAME=mean_shift -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/ConfigureFile.cmake
[383/628] cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/methods/mean_shift && /usr/bin/cmake -DNAME=mean_shift -DGENERATE_CPP_IN=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/R/generate_R.cpp.in -DGENERATE_CPP_OUT=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/build/generate_r_mean_shift.cpp -DPROGRAM_MAIN_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/methods/mean_shift/mean_shift_main.cpp -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/ConfigureFile.cmake
[384/628] : && /usr/bin/x86_64-pc-linux-gnu-g++ -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 src/mlpack/methods/logistic_regression/CMakeFiles/generate_pyx_logistic_regression.dir/__/__/bindings/python/generate_pyx_logistic_regression.cpp.o src/mlpack/methods/logistic_regression/CMakeFiles/generate_pyx_logistic_regression.dir/__/__/bindings/python/print_pyx.cpp.o -o bin/generate_pyx_logistic_regression -Wl,-rpath,/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib lib/libmlpack.so.3.4 /usr/lib64/libarmadillo.so /usr/lib/gcc/x86_64-pc-linux-gnu/11.2.0/libgomp.so /usr/lib64/libpthread.so && cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/methods/logistic_regression && /usr/bin/cmake -DPROGRAM=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/bin/generate_pyx_logistic_regression -DOUTPUT_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/mlpack/logistic_regression.pyx -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/RunProgram.cmake
[385/628] : && /usr/bin/x86_64-pc-linux-gnu-g++ -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 src/mlpack/methods/logistic_regression/CMakeFiles/generate_r_logistic_regression.dir/__/__/bindings/R/build/generate_r_logistic_regression.cpp.o src/mlpack/methods/logistic_regression/CMakeFiles/generate_r_logistic_regression.dir/__/__/bindings/R/print_R.cpp.o -o src/mlpack/bindings/R/build/bin/generate_r_logistic_regression -Wl,-rpath,/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib lib/libmlpack.so.3.4 /usr/lib64/libarmadillo.so /usr/lib/gcc/x86_64-pc-linux-gnu/11.2.0/libgomp.so /usr/lib64/libpthread.so && cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/methods/logistic_regression && /usr/bin/cmake -DGENERATE_BINDING_PROGRAM=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/build/bin/generate_r_logistic_regression -DBINDING_OUTPUT_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/mlpack/R/logistic_regression.R -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/GenerateBinding.cmake
[386/628] : && /usr/bin/x86_64-pc-linux-gnu-g++ -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 src/mlpack/methods/local_coordinate_coding/CMakeFiles/generate_pyx_local_coordinate_coding.dir/__/__/bindings/python/generate_pyx_local_coordinate_coding.cpp.o src/mlpack/methods/local_coordinate_coding/CMakeFiles/generate_pyx_local_coordinate_coding.dir/__/__/bindings/python/print_pyx.cpp.o -o bin/generate_pyx_local_coordinate_coding -Wl,-rpath,/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib lib/libmlpack.so.3.4 /usr/lib64/libarmadillo.so /usr/lib/gcc/x86_64-pc-linux-gnu/11.2.0/libgomp.so /usr/lib64/libpthread.so && cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/methods/local_coordinate_coding && /usr/bin/cmake -DPROGRAM=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/bin/generate_pyx_local_coordinate_coding -DOUTPUT_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/mlpack/local_coordinate_coding.pyx -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/RunProgram.cmake
[387/628] : && /usr/bin/x86_64-pc-linux-gnu-g++ -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 src/mlpack/methods/lsh/CMakeFiles/generate_r_lsh.dir/__/__/bindings/R/build/generate_r_lsh.cpp.o src/mlpack/methods/lsh/CMakeFiles/generate_r_lsh.dir/__/__/bindings/R/print_R.cpp.o -o src/mlpack/bindings/R/build/bin/generate_r_lsh -Wl,-rpath,/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib lib/libmlpack.so.3.4 /usr/lib64/libarmadillo.so /usr/lib/gcc/x86_64-pc-linux-gnu/11.2.0/libgomp.so /usr/lib64/libpthread.so && cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/methods/lsh && /usr/bin/cmake -DGENERATE_BINDING_PROGRAM=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/build/bin/generate_r_lsh -DBINDING_OUTPUT_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/mlpack/R/lsh.R -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/GenerateBinding.cmake
[388/628] cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python && /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/temp/python3.9/bin/python /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/setup.py build_ext --module=linear_svm.pyx
running build_ext
cythoning mlpack/linear_svm.pyx to mlpack/linear_svm.cpp
/usr/lib/python3.9/site-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/mlpack/linear_svm.pyx
tree = Parsing.p_module(s, pxd, full_module_name)
building 'mlpack.linear_svm' extension
x86_64-pc-linux-gnu-g++ -pthread -Os -pipe -march=native -frecord-gcc-switches -fPIC -I/usr/lib/python3.9/site-packages/numpy/core/include -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/ -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include -I/usr/include -I/usr/include -I/usr/include/stb -I/usr/include -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -I/usr/include/python3.9 -c mlpack/linear_svm.cpp -o build/temp.linux-x86_64-3.9/mlpack/linear_svm.o -DBINDING_TYPE=BINDING_TYPE_PYX -std=c++11 -fopenmp -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp
In file included from /usr/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h:1969,
from /usr/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h:12,
from /usr/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h:4,
from mlpack/linear_svm.cpp:635:
/usr/lib/python3.9/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
17 | #warning "Using deprecated NumPy API, disable it with " \
| ^~~~~~~
x86_64-pc-linux-gnu-g++ -pthread -shared -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 -Os -pipe -march=native -frecord-gcc-switches build/temp.linux-x86_64-3.9/mlpack/linear_svm.o -L/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib -L/usr/lib64 -o build/lib.linux-x86_64-3.9/mlpack/linear_svm.cpython-39-x86_64-linux-gnu.so -fopenmp /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib/libmlpack.so /usr/lib64/libarmadillo.so
[389/628] /usr/bin/x86_64-pc-linux-gnu-g++ -DARMA_NO_DEBUG -DHAS_OPENMP -DHAS_STB -DNDEBUG -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include/stb -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -DBINDING_TYPE=BINDING_TYPE_CLI -std=gnu++11 -MD -MT src/mlpack/methods/lsh/CMakeFiles/mlpack_lsh.dir/lsh_main.cpp.o -MF src/mlpack/methods/lsh/CMakeFiles/mlpack_lsh.dir/lsh_main.cpp.o.d -o src/mlpack/methods/lsh/CMakeFiles/mlpack_lsh.dir/lsh_main.cpp.o -c /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/methods/lsh/lsh_main.cpp
[390/628] cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python && /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/temp/python3.9/bin/python /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/setup.py build_ext --module=lmnn.pyx
running build_ext
cythoning mlpack/lmnn.pyx to mlpack/lmnn.cpp
/usr/lib/python3.9/site-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/mlpack/lmnn.pyx
tree = Parsing.p_module(s, pxd, full_module_name)
building 'mlpack.lmnn' extension
x86_64-pc-linux-gnu-g++ -pthread -Os -pipe -march=native -frecord-gcc-switches -fPIC -I/usr/lib/python3.9/site-packages/numpy/core/include -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/ -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include -I/usr/include -I/usr/include -I/usr/include/stb -I/usr/include -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -I/usr/include/python3.9 -c mlpack/lmnn.cpp -o build/temp.linux-x86_64-3.9/mlpack/lmnn.o -DBINDING_TYPE=BINDING_TYPE_PYX -std=c++11 -fopenmp -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp
In file included from /usr/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h:1969,
from /usr/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h:12,
from /usr/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h:4,
from mlpack/lmnn.cpp:635:
/usr/lib/python3.9/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
17 | #warning "Using deprecated NumPy API, disable it with " \
| ^~~~~~~
x86_64-pc-linux-gnu-g++ -pthread -shared -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 -Os -pipe -march=native -frecord-gcc-switches build/temp.linux-x86_64-3.9/mlpack/lmnn.o -L/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib -L/usr/lib64 -o build/lib.linux-x86_64-3.9/mlpack/lmnn.cpython-39-x86_64-linux-gnu.so -fopenmp /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib/libmlpack.so /usr/lib64/libarmadillo.so
[391/628] /usr/bin/x86_64-pc-linux-gnu-g++ -DARMA_NO_DEBUG -DHAS_OPENMP -DHAS_STB -DNDEBUG -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include/stb -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -DBINDING_TYPE=BINDING_TYPE_CLI -std=gnu++11 -MD -MT src/mlpack/methods/logistic_regression/CMakeFiles/mlpack_logistic_regression.dir/logistic_regression_main.cpp.o -MF src/mlpack/methods/logistic_regression/CMakeFiles/mlpack_logistic_regression.dir/logistic_regression_main.cpp.o.d -o src/mlpack/methods/logistic_regression/CMakeFiles/mlpack_logistic_regression.dir/logistic_regression_main.cpp.o -c /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/methods/logistic_regression/logistic_regression_main.cpp
[392/628] /usr/bin/x86_64-pc-linux-gnu-g++ -DARMA_NO_DEBUG -DHAS_OPENMP -DHAS_STB -DNDEBUG -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include/stb -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -DBINDING_TYPE=BINDING_TYPE_PYX -std=gnu++11 -MD -MT src/mlpack/methods/lsh/CMakeFiles/generate_pyx_lsh.dir/__/__/bindings/python/print_pyx.cpp.o -MF src/mlpack/methods/lsh/CMakeFiles/generate_pyx_lsh.dir/__/__/bindings/python/print_pyx.cpp.o.d -o src/mlpack/methods/lsh/CMakeFiles/generate_pyx_lsh.dir/__/__/bindings/python/print_pyx.cpp.o -c /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/python/print_pyx.cpp
[393/628] cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/methods/naive_bayes && /usr/bin/cmake -DMODEL_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/mlpack/model.txt -DPROGRAM_NAME=nbc -DPROGRAM_MAIN_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/methods/naive_bayes/nbc_main.cpp -DSOURCE_DIR=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1 -DR_CPP_IN=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/R/r_method.cpp.in -DR_CPP_OUT=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/mlpack/src/nbc.cpp -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/R/ConfigureRCPP.cmake
[394/628] cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/methods/naive_bayes && /usr/bin/cmake -DNAME=nbc -DGENERATE_CPP_IN=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/R/generate_R.cpp.in -DGENERATE_CPP_OUT=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/build/generate_r_nbc.cpp -DPROGRAM_MAIN_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/methods/naive_bayes/nbc_main.cpp -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/ConfigureFile.cmake
[395/628] /usr/bin/x86_64-pc-linux-gnu-g++ -DARMA_NO_DEBUG -DHAS_OPENMP -DHAS_STB -DNDEBUG -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include/stb -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -DBINDING_TYPE=BINDING_TYPE_PYX -std=gnu++11 -MD -MT src/mlpack/methods/mean_shift/CMakeFiles/generate_pyx_mean_shift.dir/__/__/bindings/python/print_pyx.cpp.o -MF src/mlpack/methods/mean_shift/CMakeFiles/generate_pyx_mean_shift.dir/__/__/bindings/python/print_pyx.cpp.o.d -o src/mlpack/methods/mean_shift/CMakeFiles/generate_pyx_mean_shift.dir/__/__/bindings/python/print_pyx.cpp.o -c /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/python/print_pyx.cpp
[396/628] : && /usr/bin/x86_64-pc-linux-gnu-g++ -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 src/mlpack/methods/lsh/CMakeFiles/generate_pyx_lsh.dir/__/__/bindings/python/generate_pyx_lsh.cpp.o src/mlpack/methods/lsh/CMakeFiles/generate_pyx_lsh.dir/__/__/bindings/python/print_pyx.cpp.o -o bin/generate_pyx_lsh -Wl,-rpath,/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib lib/libmlpack.so.3.4 /usr/lib64/libarmadillo.so /usr/lib/gcc/x86_64-pc-linux-gnu/11.2.0/libgomp.so /usr/lib64/libpthread.so && cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/methods/lsh && /usr/bin/cmake -DPROGRAM=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/bin/generate_pyx_lsh -DOUTPUT_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/mlpack/lsh.pyx -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/RunProgram.cmake
[397/628] : && /usr/bin/x86_64-pc-linux-gnu-g++ -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 src/mlpack/methods/lsh/CMakeFiles/mlpack_lsh.dir/lsh_main.cpp.o -o bin/mlpack_lsh -Wl,-rpath,/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib: lib/libmlpack.so.3.4 /usr/lib64/libarmadillo.so -lpthread /usr/lib/gcc/x86_64-pc-linux-gnu/11.2.0/libgomp.so /usr/lib64/libpthread.so && :
[398/628] cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/methods/naive_bayes && /usr/bin/cmake -DGENERATE_CPP_IN=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/python/generate_pyx.cpp.in -DGENERATE_CPP_OUT=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/generate_pyx_nbc.cpp -DPROGRAM_MAIN_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/methods/naive_bayes/nbc_main.cpp -DPROGRAM_NAME=nbc -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/ConfigureFile.cmake
[399/628] : && /usr/bin/x86_64-pc-linux-gnu-g++ -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 src/mlpack/methods/logistic_regression/CMakeFiles/mlpack_logistic_regression.dir/logistic_regression_main.cpp.o -o bin/mlpack_logistic_regression -Wl,-rpath,/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib: lib/libmlpack.so.3.4 /usr/lib64/libarmadillo.so -lpthread /usr/lib/gcc/x86_64-pc-linux-gnu/11.2.0/libgomp.so /usr/lib64/libpthread.so && :
[400/628] /usr/bin/x86_64-pc-linux-gnu-g++ -DARMA_NO_DEBUG -DHAS_OPENMP -DHAS_STB -DNDEBUG -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include/stb -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -DBINDING_TYPE=BINDING_TYPE_R -std=gnu++11 -MD -MT src/mlpack/methods/mean_shift/CMakeFiles/generate_r_mean_shift.dir/__/__/bindings/R/print_R.cpp.o -MF src/mlpack/methods/mean_shift/CMakeFiles/generate_r_mean_shift.dir/__/__/bindings/R/print_R.cpp.o.d -o src/mlpack/methods/mean_shift/CMakeFiles/generate_r_mean_shift.dir/__/__/bindings/R/print_R.cpp.o -c /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/R/print_R.cpp
[401/628] /usr/bin/x86_64-pc-linux-gnu-g++ -DARMA_NO_DEBUG -DHAS_OPENMP -DHAS_STB -DNDEBUG -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include/stb -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -DBINDING_TYPE=BINDING_TYPE_R -std=gnu++11 -MD -MT src/mlpack/methods/mean_shift/CMakeFiles/generate_r_mean_shift.dir/__/__/bindings/R/build/generate_r_mean_shift.cpp.o -MF src/mlpack/methods/mean_shift/CMakeFiles/generate_r_mean_shift.dir/__/__/bindings/R/build/generate_r_mean_shift.cpp.o.d -o src/mlpack/methods/mean_shift/CMakeFiles/generate_r_mean_shift.dir/__/__/bindings/R/build/generate_r_mean_shift.cpp.o -c /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/build/generate_r_mean_shift.cpp
[402/628] /usr/bin/x86_64-pc-linux-gnu-g++ -DARMA_NO_DEBUG -DHAS_OPENMP -DHAS_STB -DNDEBUG -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include/stb -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -DBINDING_TYPE=BINDING_TYPE_PYX -std=gnu++11 -MD -MT src/mlpack/methods/mean_shift/CMakeFiles/generate_pyx_mean_shift.dir/__/__/bindings/python/generate_pyx_mean_shift.cpp.o -MF src/mlpack/methods/mean_shift/CMakeFiles/generate_pyx_mean_shift.dir/__/__/bindings/python/generate_pyx_mean_shift.cpp.o.d -o src/mlpack/methods/mean_shift/CMakeFiles/generate_pyx_mean_shift.dir/__/__/bindings/python/generate_pyx_mean_shift.cpp.o -c /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/generate_pyx_mean_shift.cpp
[403/628] /usr/bin/x86_64-pc-linux-gnu-g++ -DARMA_NO_DEBUG -DHAS_OPENMP -DHAS_STB -DNDEBUG -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include/stb -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -DBINDING_TYPE=BINDING_TYPE_R -std=gnu++11 -MD -MT src/mlpack/methods/naive_bayes/CMakeFiles/generate_r_nbc.dir/__/__/bindings/R/print_R.cpp.o -MF src/mlpack/methods/naive_bayes/CMakeFiles/generate_r_nbc.dir/__/__/bindings/R/print_R.cpp.o.d -o src/mlpack/methods/naive_bayes/CMakeFiles/generate_r_nbc.dir/__/__/bindings/R/print_R.cpp.o -c /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/R/print_R.cpp
[404/628] /usr/bin/x86_64-pc-linux-gnu-g++ -DARMA_NO_DEBUG -DHAS_OPENMP -DHAS_STB -DNDEBUG -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include/stb -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -DBINDING_TYPE=BINDING_TYPE_PYX -std=gnu++11 -MD -MT src/mlpack/methods/naive_bayes/CMakeFiles/generate_pyx_nbc.dir/__/__/bindings/python/print_pyx.cpp.o -MF src/mlpack/methods/naive_bayes/CMakeFiles/generate_pyx_nbc.dir/__/__/bindings/python/print_pyx.cpp.o.d -o src/mlpack/methods/naive_bayes/CMakeFiles/generate_pyx_nbc.dir/__/__/bindings/python/print_pyx.cpp.o -c /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/python/print_pyx.cpp
[405/628] cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python && /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/temp/python3.9/bin/python /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/setup.py build_ext --module=local_coordinate_coding.pyx
running build_ext
cythoning mlpack/local_coordinate_coding.pyx to mlpack/local_coordinate_coding.cpp
/usr/lib/python3.9/site-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/mlpack/local_coordinate_coding.pyx
tree = Parsing.p_module(s, pxd, full_module_name)
building 'mlpack.local_coordinate_coding' extension
x86_64-pc-linux-gnu-g++ -pthread -Os -pipe -march=native -frecord-gcc-switches -fPIC -I/usr/lib/python3.9/site-packages/numpy/core/include -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/ -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include -I/usr/include -I/usr/include -I/usr/include/stb -I/usr/include -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -I/usr/include/python3.9 -c mlpack/local_coordinate_coding.cpp -o build/temp.linux-x86_64-3.9/mlpack/local_coordinate_coding.o -DBINDING_TYPE=BINDING_TYPE_PYX -std=c++11 -fopenmp -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp
In file included from /usr/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h:1969,
from /usr/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h:12,
from /usr/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h:4,
from mlpack/local_coordinate_coding.cpp:635:
/usr/lib/python3.9/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
17 | #warning "Using deprecated NumPy API, disable it with " \
| ^~~~~~~
x86_64-pc-linux-gnu-g++ -pthread -shared -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 -Os -pipe -march=native -frecord-gcc-switches build/temp.linux-x86_64-3.9/mlpack/local_coordinate_coding.o -L/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib -L/usr/lib64 -o build/lib.linux-x86_64-3.9/mlpack/local_coordinate_coding.cpython-39-x86_64-linux-gnu.so -fopenmp /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib/libmlpack.so /usr/lib64/libarmadillo.so
[406/628] /usr/bin/x86_64-pc-linux-gnu-g++ -DARMA_NO_DEBUG -DHAS_OPENMP -DHAS_STB -DNDEBUG -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include/stb -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -DBINDING_TYPE=BINDING_TYPE_CLI -std=gnu++11 -MD -MT src/mlpack/methods/mean_shift/CMakeFiles/mlpack_mean_shift.dir/mean_shift_main.cpp.o -MF src/mlpack/methods/mean_shift/CMakeFiles/mlpack_mean_shift.dir/mean_shift_main.cpp.o.d -o src/mlpack/methods/mean_shift/CMakeFiles/mlpack_mean_shift.dir/mean_shift_main.cpp.o -c /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/methods/mean_shift/mean_shift_main.cpp
[407/628] /usr/bin/x86_64-pc-linux-gnu-g++ -DARMA_NO_DEBUG -DHAS_OPENMP -DHAS_STB -DNDEBUG -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include/stb -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -DBINDING_TYPE=BINDING_TYPE_R -std=gnu++11 -MD -MT src/mlpack/methods/naive_bayes/CMakeFiles/generate_r_nbc.dir/__/__/bindings/R/build/generate_r_nbc.cpp.o -MF src/mlpack/methods/naive_bayes/CMakeFiles/generate_r_nbc.dir/__/__/bindings/R/build/generate_r_nbc.cpp.o.d -o src/mlpack/methods/naive_bayes/CMakeFiles/generate_r_nbc.dir/__/__/bindings/R/build/generate_r_nbc.cpp.o -c /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/build/generate_r_nbc.cpp
[408/628] /usr/bin/x86_64-pc-linux-gnu-g++ -DARMA_NO_DEBUG -DHAS_OPENMP -DHAS_STB -DNDEBUG -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include/stb -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -DBINDING_TYPE=BINDING_TYPE_PYX -std=gnu++11 -MD -MT src/mlpack/methods/naive_bayes/CMakeFiles/generate_pyx_nbc.dir/__/__/bindings/python/generate_pyx_nbc.cpp.o -MF src/mlpack/methods/naive_bayes/CMakeFiles/generate_pyx_nbc.dir/__/__/bindings/python/generate_pyx_nbc.cpp.o.d -o src/mlpack/methods/naive_bayes/CMakeFiles/generate_pyx_nbc.dir/__/__/bindings/python/generate_pyx_nbc.cpp.o -c /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/generate_pyx_nbc.cpp
[409/628] cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python && /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/temp/python3.9/bin/python /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/setup.py build_ext --module=logistic_regression.pyx
running build_ext
cythoning mlpack/logistic_regression.pyx to mlpack/logistic_regression.cpp
/usr/lib/python3.9/site-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/mlpack/logistic_regression.pyx
tree = Parsing.p_module(s, pxd, full_module_name)
building 'mlpack.logistic_regression' extension
x86_64-pc-linux-gnu-g++ -pthread -Os -pipe -march=native -frecord-gcc-switches -fPIC -I/usr/lib/python3.9/site-packages/numpy/core/include -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/ -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include -I/usr/include -I/usr/include -I/usr/include/stb -I/usr/include -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -I/usr/include/python3.9 -c mlpack/logistic_regression.cpp -o build/temp.linux-x86_64-3.9/mlpack/logistic_regression.o -DBINDING_TYPE=BINDING_TYPE_PYX -std=c++11 -fopenmp -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp
In file included from /usr/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h:1969,
from /usr/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h:12,
from /usr/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h:4,
from mlpack/logistic_regression.cpp:635:
/usr/lib/python3.9/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
17 | #warning "Using deprecated NumPy API, disable it with " \
| ^~~~~~~
x86_64-pc-linux-gnu-g++ -pthread -shared -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 -Os -pipe -march=native -frecord-gcc-switches build/temp.linux-x86_64-3.9/mlpack/logistic_regression.o -L/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib -L/usr/lib64 -o build/lib.linux-x86_64-3.9/mlpack/logistic_regression.cpython-39-x86_64-linux-gnu.so -fopenmp /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib/libmlpack.so /usr/lib64/libarmadillo.so
[410/628] /usr/bin/x86_64-pc-linux-gnu-g++ -DARMA_NO_DEBUG -DHAS_OPENMP -DHAS_STB -DNDEBUG -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include/stb -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -DBINDING_TYPE=BINDING_TYPE_CLI -std=gnu++11 -MD -MT src/mlpack/methods/nca/CMakeFiles/mlpack_nca.dir/nca_main.cpp.o -MF src/mlpack/methods/nca/CMakeFiles/mlpack_nca.dir/nca_main.cpp.o.d -o src/mlpack/methods/nca/CMakeFiles/mlpack_nca.dir/nca_main.cpp.o -c /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/methods/nca/nca_main.cpp
[411/628] cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/methods/nca && /usr/bin/cmake -DGENERATE_CPP_IN=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/python/generate_pyx.cpp.in -DGENERATE_CPP_OUT=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/generate_pyx_nca.cpp -DPROGRAM_MAIN_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/methods/nca/nca_main.cpp -DPROGRAM_NAME=nca -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/ConfigureFile.cmake
[412/628] cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/methods/nca && /usr/bin/cmake -DMODEL_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/mlpack/model.txt -DPROGRAM_NAME=nca -DPROGRAM_MAIN_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/methods/nca/nca_main.cpp -DSOURCE_DIR=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1 -DR_CPP_IN=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/R/r_method.cpp.in -DR_CPP_OUT=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/mlpack/src/nca.cpp -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/R/ConfigureRCPP.cmake
[413/628] : && /usr/bin/x86_64-pc-linux-gnu-g++ -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 src/mlpack/methods/naive_bayes/CMakeFiles/generate_r_nbc.dir/__/__/bindings/R/build/generate_r_nbc.cpp.o src/mlpack/methods/naive_bayes/CMakeFiles/generate_r_nbc.dir/__/__/bindings/R/print_R.cpp.o -o src/mlpack/bindings/R/build/bin/generate_r_nbc -Wl,-rpath,/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib lib/libmlpack.so.3.4 /usr/lib64/libarmadillo.so /usr/lib/gcc/x86_64-pc-linux-gnu/11.2.0/libgomp.so /usr/lib64/libpthread.so && cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/methods/naive_bayes && /usr/bin/cmake -DGENERATE_BINDING_PROGRAM=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/build/bin/generate_r_nbc -DBINDING_OUTPUT_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/mlpack/R/nbc.R -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/GenerateBinding.cmake
[414/628] : && /usr/bin/x86_64-pc-linux-gnu-g++ -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 src/mlpack/methods/naive_bayes/CMakeFiles/generate_pyx_nbc.dir/__/__/bindings/python/generate_pyx_nbc.cpp.o src/mlpack/methods/naive_bayes/CMakeFiles/generate_pyx_nbc.dir/__/__/bindings/python/print_pyx.cpp.o -o bin/generate_pyx_nbc -Wl,-rpath,/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib lib/libmlpack.so.3.4 /usr/lib64/libarmadillo.so /usr/lib/gcc/x86_64-pc-linux-gnu/11.2.0/libgomp.so /usr/lib64/libpthread.so && cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/methods/naive_bayes && /usr/bin/cmake -DPROGRAM=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/bin/generate_pyx_nbc -DOUTPUT_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/mlpack/nbc.pyx -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/RunProgram.cmake
[415/628] : && /usr/bin/x86_64-pc-linux-gnu-g++ -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 src/mlpack/methods/mean_shift/CMakeFiles/mlpack_mean_shift.dir/mean_shift_main.cpp.o -o bin/mlpack_mean_shift -Wl,-rpath,/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib: lib/libmlpack.so.3.4 /usr/lib64/libarmadillo.so -lpthread /usr/lib/gcc/x86_64-pc-linux-gnu/11.2.0/libgomp.so /usr/lib64/libpthread.so && :
[416/628] cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/methods/nca && /usr/bin/cmake -DNAME=nca -DGENERATE_CPP_IN=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/R/generate_R.cpp.in -DGENERATE_CPP_OUT=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/build/generate_r_nca.cpp -DPROGRAM_MAIN_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/methods/nca/nca_main.cpp -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/ConfigureFile.cmake
[417/628] : && /usr/bin/x86_64-pc-linux-gnu-g++ -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 src/mlpack/methods/mean_shift/CMakeFiles/generate_r_mean_shift.dir/__/__/bindings/R/build/generate_r_mean_shift.cpp.o src/mlpack/methods/mean_shift/CMakeFiles/generate_r_mean_shift.dir/__/__/bindings/R/print_R.cpp.o -o src/mlpack/bindings/R/build/bin/generate_r_mean_shift -Wl,-rpath,/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib lib/libmlpack.so.3.4 /usr/lib64/libarmadillo.so /usr/lib/gcc/x86_64-pc-linux-gnu/11.2.0/libgomp.so /usr/lib64/libpthread.so && cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/methods/mean_shift && /usr/bin/cmake -DGENERATE_BINDING_PROGRAM=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/build/bin/generate_r_mean_shift -DBINDING_OUTPUT_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/mlpack/R/mean_shift.R -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/GenerateBinding.cmake
[418/628] : && /usr/bin/x86_64-pc-linux-gnu-g++ -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 src/mlpack/methods/mean_shift/CMakeFiles/generate_pyx_mean_shift.dir/__/__/bindings/python/generate_pyx_mean_shift.cpp.o src/mlpack/methods/mean_shift/CMakeFiles/generate_pyx_mean_shift.dir/__/__/bindings/python/print_pyx.cpp.o -o bin/generate_pyx_mean_shift -Wl,-rpath,/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib lib/libmlpack.so.3.4 /usr/lib64/libarmadillo.so /usr/lib/gcc/x86_64-pc-linux-gnu/11.2.0/libgomp.so /usr/lib64/libpthread.so && cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/methods/mean_shift && /usr/bin/cmake -DPROGRAM=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/bin/generate_pyx_mean_shift -DOUTPUT_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/mlpack/mean_shift.pyx -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/RunProgram.cmake
[419/628] : && /usr/bin/x86_64-pc-linux-gnu-g++ -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 src/mlpack/methods/nca/CMakeFiles/mlpack_nca.dir/nca_main.cpp.o -o bin/mlpack_nca -Wl,-rpath,/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib: lib/libmlpack.so.3.4 /usr/lib64/libarmadillo.so -lpthread /usr/lib/gcc/x86_64-pc-linux-gnu/11.2.0/libgomp.so /usr/lib64/libpthread.so && :
[420/628] cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/methods/neighbor_search && /usr/bin/cmake -DGENERATE_CPP_IN=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/python/generate_pyx.cpp.in -DGENERATE_CPP_OUT=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/generate_pyx_knn.cpp -DPROGRAM_MAIN_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/methods/neighbor_search/knn_main.cpp -DPROGRAM_NAME=knn -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/ConfigureFile.cmake
[421/628] cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/methods/neighbor_search && /usr/bin/cmake -DMODEL_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/mlpack/model.txt -DPROGRAM_NAME=kfn -DPROGRAM_MAIN_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/methods/neighbor_search/kfn_main.cpp -DSOURCE_DIR=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1 -DR_CPP_IN=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/R/r_method.cpp.in -DR_CPP_OUT=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/mlpack/src/kfn.cpp -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/R/ConfigureRCPP.cmake
[422/628] cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python && /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/temp/python3.9/bin/python /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/setup.py build_ext --module=lsh.pyx
running build_ext
cythoning mlpack/lsh.pyx to mlpack/lsh.cpp
/usr/lib/python3.9/site-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/mlpack/lsh.pyx
tree = Parsing.p_module(s, pxd, full_module_name)
building 'mlpack.lsh' extension
x86_64-pc-linux-gnu-g++ -pthread -Os -pipe -march=native -frecord-gcc-switches -fPIC -I/usr/lib/python3.9/site-packages/numpy/core/include -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/ -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include -I/usr/include -I/usr/include -I/usr/include/stb -I/usr/include -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -I/usr/include/python3.9 -c mlpack/lsh.cpp -o build/temp.linux-x86_64-3.9/mlpack/lsh.o -DBINDING_TYPE=BINDING_TYPE_PYX -std=c++11 -fopenmp -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp
In file included from /usr/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h:1969,
from /usr/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h:12,
from /usr/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h:4,
from mlpack/lsh.cpp:635:
/usr/lib/python3.9/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
17 | #warning "Using deprecated NumPy API, disable it with " \
| ^~~~~~~
x86_64-pc-linux-gnu-g++ -pthread -shared -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 -Os -pipe -march=native -frecord-gcc-switches build/temp.linux-x86_64-3.9/mlpack/lsh.o -L/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib -L/usr/lib64 -o build/lib.linux-x86_64-3.9/mlpack/lsh.cpython-39-x86_64-linux-gnu.so -fopenmp /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib/libmlpack.so /usr/lib64/libarmadillo.so
[423/628] cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/methods/neighbor_search && /usr/bin/cmake -DNAME=kfn -DGENERATE_CPP_IN=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/R/generate_R.cpp.in -DGENERATE_CPP_OUT=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/build/generate_r_kfn.cpp -DPROGRAM_MAIN_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/methods/neighbor_search/kfn_main.cpp -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/ConfigureFile.cmake
[424/628] /usr/bin/x86_64-pc-linux-gnu-g++ -DARMA_NO_DEBUG -DHAS_OPENMP -DHAS_STB -DNDEBUG -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include/stb -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -DBINDING_TYPE=BINDING_TYPE_CLI -std=gnu++11 -MD -MT src/mlpack/methods/naive_bayes/CMakeFiles/mlpack_nbc.dir/nbc_main.cpp.o -MF src/mlpack/methods/naive_bayes/CMakeFiles/mlpack_nbc.dir/nbc_main.cpp.o.d -o src/mlpack/methods/naive_bayes/CMakeFiles/mlpack_nbc.dir/nbc_main.cpp.o -c /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/methods/naive_bayes/nbc_main.cpp
[425/628] : && /usr/bin/x86_64-pc-linux-gnu-g++ -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 src/mlpack/methods/naive_bayes/CMakeFiles/mlpack_nbc.dir/nbc_main.cpp.o -o bin/mlpack_nbc -Wl,-rpath,/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib: lib/libmlpack.so.3.4 /usr/lib64/libarmadillo.so -lpthread /usr/lib/gcc/x86_64-pc-linux-gnu/11.2.0/libgomp.so /usr/lib64/libpthread.so && :
[426/628] /usr/bin/x86_64-pc-linux-gnu-g++ -DARMA_NO_DEBUG -DHAS_OPENMP -DHAS_STB -DNDEBUG -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include/stb -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -DBINDING_TYPE=BINDING_TYPE_R -std=gnu++11 -MD -MT src/mlpack/methods/nca/CMakeFiles/generate_r_nca.dir/__/__/bindings/R/print_R.cpp.o -MF src/mlpack/methods/nca/CMakeFiles/generate_r_nca.dir/__/__/bindings/R/print_R.cpp.o.d -o src/mlpack/methods/nca/CMakeFiles/generate_r_nca.dir/__/__/bindings/R/print_R.cpp.o -c /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/R/print_R.cpp
[427/628] /usr/bin/x86_64-pc-linux-gnu-g++ -DARMA_NO_DEBUG -DHAS_OPENMP -DHAS_STB -DNDEBUG -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include/stb -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -DBINDING_TYPE=BINDING_TYPE_PYX -std=gnu++11 -MD -MT src/mlpack/methods/nca/CMakeFiles/generate_pyx_nca.dir/__/__/bindings/python/print_pyx.cpp.o -MF src/mlpack/methods/nca/CMakeFiles/generate_pyx_nca.dir/__/__/bindings/python/print_pyx.cpp.o.d -o src/mlpack/methods/nca/CMakeFiles/generate_pyx_nca.dir/__/__/bindings/python/print_pyx.cpp.o -c /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/python/print_pyx.cpp
[428/628] /usr/bin/x86_64-pc-linux-gnu-g++ -DARMA_NO_DEBUG -DHAS_OPENMP -DHAS_STB -DNDEBUG -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include/stb -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -DBINDING_TYPE=BINDING_TYPE_PYX -std=gnu++11 -MD -MT src/mlpack/methods/neighbor_search/CMakeFiles/generate_pyx_knn.dir/__/__/bindings/python/print_pyx.cpp.o -MF src/mlpack/methods/neighbor_search/CMakeFiles/generate_pyx_knn.dir/__/__/bindings/python/print_pyx.cpp.o.d -o src/mlpack/methods/neighbor_search/CMakeFiles/generate_pyx_knn.dir/__/__/bindings/python/print_pyx.cpp.o -c /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/python/print_pyx.cpp
[429/628] /usr/bin/x86_64-pc-linux-gnu-g++ -DARMA_NO_DEBUG -DHAS_OPENMP -DHAS_STB -DNDEBUG -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include/stb -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -DBINDING_TYPE=BINDING_TYPE_R -std=gnu++11 -MD -MT src/mlpack/methods/neighbor_search/CMakeFiles/generate_r_kfn.dir/__/__/bindings/R/print_R.cpp.o -MF src/mlpack/methods/neighbor_search/CMakeFiles/generate_r_kfn.dir/__/__/bindings/R/print_R.cpp.o.d -o src/mlpack/methods/neighbor_search/CMakeFiles/generate_r_kfn.dir/__/__/bindings/R/print_R.cpp.o -c /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/R/print_R.cpp
[430/628] /usr/bin/x86_64-pc-linux-gnu-g++ -DARMA_NO_DEBUG -DHAS_OPENMP -DHAS_STB -DNDEBUG -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include/stb -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -DBINDING_TYPE=BINDING_TYPE_R -std=gnu++11 -MD -MT src/mlpack/methods/nca/CMakeFiles/generate_r_nca.dir/__/__/bindings/R/build/generate_r_nca.cpp.o -MF src/mlpack/methods/nca/CMakeFiles/generate_r_nca.dir/__/__/bindings/R/build/generate_r_nca.cpp.o.d -o src/mlpack/methods/nca/CMakeFiles/generate_r_nca.dir/__/__/bindings/R/build/generate_r_nca.cpp.o -c /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/build/generate_r_nca.cpp
[431/628] cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/methods/neighbor_search && /usr/bin/cmake -DGENERATE_CPP_IN=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/python/generate_pyx.cpp.in -DGENERATE_CPP_OUT=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/generate_pyx_kfn.cpp -DPROGRAM_MAIN_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/methods/neighbor_search/kfn_main.cpp -DPROGRAM_NAME=kfn -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/ConfigureFile.cmake
[432/628] cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/methods/neighbor_search && /usr/bin/cmake -DMODEL_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/mlpack/model.txt -DPROGRAM_NAME=knn -DPROGRAM_MAIN_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/methods/neighbor_search/knn_main.cpp -DSOURCE_DIR=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1 -DR_CPP_IN=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/R/r_method.cpp.in -DR_CPP_OUT=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/mlpack/src/knn.cpp -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/R/ConfigureRCPP.cmake
[433/628] cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/methods/nmf && /usr/bin/cmake -DMODEL_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/mlpack/model.txt -DPROGRAM_NAME=nmf -DPROGRAM_MAIN_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/methods/nmf/nmf_main.cpp -DSOURCE_DIR=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1 -DR_CPP_IN=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/R/r_method.cpp.in -DR_CPP_OUT=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/mlpack/src/nmf.cpp -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/R/ConfigureRCPP.cmake
[434/628] cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/methods/neighbor_search && /usr/bin/cmake -DNAME=knn -DGENERATE_CPP_IN=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/R/generate_R.cpp.in -DGENERATE_CPP_OUT=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/build/generate_r_knn.cpp -DPROGRAM_MAIN_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/methods/neighbor_search/knn_main.cpp -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/ConfigureFile.cmake
[435/628] : && /usr/bin/x86_64-pc-linux-gnu-g++ -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 src/mlpack/methods/nca/CMakeFiles/generate_r_nca.dir/__/__/bindings/R/build/generate_r_nca.cpp.o src/mlpack/methods/nca/CMakeFiles/generate_r_nca.dir/__/__/bindings/R/print_R.cpp.o -o src/mlpack/bindings/R/build/bin/generate_r_nca -Wl,-rpath,/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib lib/libmlpack.so.3.4 /usr/lib64/libarmadillo.so /usr/lib/gcc/x86_64-pc-linux-gnu/11.2.0/libgomp.so /usr/lib64/libpthread.so && cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/methods/nca && /usr/bin/cmake -DGENERATE_BINDING_PROGRAM=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/build/bin/generate_r_nca -DBINDING_OUTPUT_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/mlpack/R/nca.R -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/GenerateBinding.cmake
[436/628] /usr/bin/x86_64-pc-linux-gnu-g++ -DARMA_NO_DEBUG -DHAS_OPENMP -DHAS_STB -DNDEBUG -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include/stb -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -DBINDING_TYPE=BINDING_TYPE_PYX -std=gnu++11 -MD -MT src/mlpack/methods/nca/CMakeFiles/generate_pyx_nca.dir/__/__/bindings/python/generate_pyx_nca.cpp.o -MF src/mlpack/methods/nca/CMakeFiles/generate_pyx_nca.dir/__/__/bindings/python/generate_pyx_nca.cpp.o.d -o src/mlpack/methods/nca/CMakeFiles/generate_pyx_nca.dir/__/__/bindings/python/generate_pyx_nca.cpp.o -c /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/generate_pyx_nca.cpp
[437/628] : && /usr/bin/x86_64-pc-linux-gnu-g++ -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 src/mlpack/methods/nca/CMakeFiles/generate_pyx_nca.dir/__/__/bindings/python/generate_pyx_nca.cpp.o src/mlpack/methods/nca/CMakeFiles/generate_pyx_nca.dir/__/__/bindings/python/print_pyx.cpp.o -o bin/generate_pyx_nca -Wl,-rpath,/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib lib/libmlpack.so.3.4 /usr/lib64/libarmadillo.so /usr/lib/gcc/x86_64-pc-linux-gnu/11.2.0/libgomp.so /usr/lib64/libpthread.so && cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/methods/nca && /usr/bin/cmake -DPROGRAM=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/bin/generate_pyx_nca -DOUTPUT_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/mlpack/nca.pyx -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/RunProgram.cmake
[438/628] cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python && /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/temp/python3.9/bin/python /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/setup.py build_ext --module=mean_shift.pyx
running build_ext
cythoning mlpack/mean_shift.pyx to mlpack/mean_shift.cpp
/usr/lib/python3.9/site-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/mlpack/mean_shift.pyx
tree = Parsing.p_module(s, pxd, full_module_name)
building 'mlpack.mean_shift' extension
x86_64-pc-linux-gnu-g++ -pthread -Os -pipe -march=native -frecord-gcc-switches -fPIC -I/usr/lib/python3.9/site-packages/numpy/core/include -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/ -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include -I/usr/include -I/usr/include -I/usr/include/stb -I/usr/include -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -I/usr/include/python3.9 -c mlpack/mean_shift.cpp -o build/temp.linux-x86_64-3.9/mlpack/mean_shift.o -DBINDING_TYPE=BINDING_TYPE_PYX -std=c++11 -fopenmp -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp
In file included from /usr/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h:1969,
from /usr/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h:12,
from /usr/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h:4,
from mlpack/mean_shift.cpp:635:
/usr/lib/python3.9/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
17 | #warning "Using deprecated NumPy API, disable it with " \
| ^~~~~~~
x86_64-pc-linux-gnu-g++ -pthread -shared -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 -Os -pipe -march=native -frecord-gcc-switches build/temp.linux-x86_64-3.9/mlpack/mean_shift.o -L/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib -L/usr/lib64 -o build/lib.linux-x86_64-3.9/mlpack/mean_shift.cpython-39-x86_64-linux-gnu.so -fopenmp /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib/libmlpack.so /usr/lib64/libarmadillo.so
[439/628] cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python && /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/temp/python3.9/bin/python /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/setup.py build_ext --module=nbc.pyx
running build_ext
cythoning mlpack/nbc.pyx to mlpack/nbc.cpp
/usr/lib/python3.9/site-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/mlpack/nbc.pyx
tree = Parsing.p_module(s, pxd, full_module_name)
building 'mlpack.nbc' extension
x86_64-pc-linux-gnu-g++ -pthread -Os -pipe -march=native -frecord-gcc-switches -fPIC -I/usr/lib/python3.9/site-packages/numpy/core/include -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/ -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include -I/usr/include -I/usr/include -I/usr/include/stb -I/usr/include -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -I/usr/include/python3.9 -c mlpack/nbc.cpp -o build/temp.linux-x86_64-3.9/mlpack/nbc.o -DBINDING_TYPE=BINDING_TYPE_PYX -std=c++11 -fopenmp -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp
In file included from /usr/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h:1969,
from /usr/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h:12,
from /usr/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h:4,
from mlpack/nbc.cpp:635:
/usr/lib/python3.9/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
17 | #warning "Using deprecated NumPy API, disable it with " \
| ^~~~~~~
x86_64-pc-linux-gnu-g++ -pthread -shared -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 -Os -pipe -march=native -frecord-gcc-switches build/temp.linux-x86_64-3.9/mlpack/nbc.o -L/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib -L/usr/lib64 -o build/lib.linux-x86_64-3.9/mlpack/nbc.cpython-39-x86_64-linux-gnu.so -fopenmp /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib/libmlpack.so /usr/lib64/libarmadillo.so
[440/628] /usr/bin/x86_64-pc-linux-gnu-g++ -DARMA_NO_DEBUG -DHAS_OPENMP -DHAS_STB -DNDEBUG -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include/stb -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -DBINDING_TYPE=BINDING_TYPE_R -std=gnu++11 -MD -MT src/mlpack/methods/neighbor_search/CMakeFiles/generate_r_knn.dir/__/__/bindings/R/print_R.cpp.o -MF src/mlpack/methods/neighbor_search/CMakeFiles/generate_r_knn.dir/__/__/bindings/R/print_R.cpp.o.d -o src/mlpack/methods/neighbor_search/CMakeFiles/generate_r_knn.dir/__/__/bindings/R/print_R.cpp.o -c /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/R/print_R.cpp
[441/628] cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/methods/nmf && /usr/bin/cmake -DNAME=nmf -DGENERATE_CPP_IN=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/R/generate_R.cpp.in -DGENERATE_CPP_OUT=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/build/generate_r_nmf.cpp -DPROGRAM_MAIN_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/methods/nmf/nmf_main.cpp -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/ConfigureFile.cmake
[442/628] cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/methods/nmf && /usr/bin/cmake -DGENERATE_CPP_IN=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/python/generate_pyx.cpp.in -DGENERATE_CPP_OUT=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/generate_pyx_nmf.cpp -DPROGRAM_MAIN_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/methods/nmf/nmf_main.cpp -DPROGRAM_NAME=nmf -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/ConfigureFile.cmake
[443/628] /usr/bin/x86_64-pc-linux-gnu-g++ -DARMA_NO_DEBUG -DHAS_OPENMP -DHAS_STB -DNDEBUG -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include/stb -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -DBINDING_TYPE=BINDING_TYPE_PYX -std=gnu++11 -MD -MT src/mlpack/methods/neighbor_search/CMakeFiles/generate_pyx_kfn.dir/__/__/bindings/python/print_pyx.cpp.o -MF src/mlpack/methods/neighbor_search/CMakeFiles/generate_pyx_kfn.dir/__/__/bindings/python/print_pyx.cpp.o.d -o src/mlpack/methods/neighbor_search/CMakeFiles/generate_pyx_kfn.dir/__/__/bindings/python/print_pyx.cpp.o -c /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/python/print_pyx.cpp
[444/628] /usr/bin/x86_64-pc-linux-gnu-g++ -DARMA_NO_DEBUG -DHAS_OPENMP -DHAS_STB -DNDEBUG -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include/stb -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -DBINDING_TYPE=BINDING_TYPE_R -std=gnu++11 -MD -MT src/mlpack/methods/nmf/CMakeFiles/generate_r_nmf.dir/__/__/bindings/R/print_R.cpp.o -MF src/mlpack/methods/nmf/CMakeFiles/generate_r_nmf.dir/__/__/bindings/R/print_R.cpp.o.d -o src/mlpack/methods/nmf/CMakeFiles/generate_r_nmf.dir/__/__/bindings/R/print_R.cpp.o -c /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/R/print_R.cpp
[445/628] /usr/bin/x86_64-pc-linux-gnu-g++ -DARMA_NO_DEBUG -DHAS_OPENMP -DHAS_STB -DNDEBUG -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include/stb -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -DBINDING_TYPE=BINDING_TYPE_CLI -std=gnu++11 -MD -MT src/mlpack/methods/nmf/CMakeFiles/mlpack_nmf.dir/nmf_main.cpp.o -MF src/mlpack/methods/nmf/CMakeFiles/mlpack_nmf.dir/nmf_main.cpp.o.d -o src/mlpack/methods/nmf/CMakeFiles/mlpack_nmf.dir/nmf_main.cpp.o -c /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/methods/nmf/nmf_main.cpp
[446/628] cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python && /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/temp/python3.9/bin/python /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/setup.py build_ext --module=nca.pyx
running build_ext
cythoning mlpack/nca.pyx to mlpack/nca.cpp
/usr/lib/python3.9/site-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/mlpack/nca.pyx
tree = Parsing.p_module(s, pxd, full_module_name)
building 'mlpack.nca' extension
x86_64-pc-linux-gnu-g++ -pthread -Os -pipe -march=native -frecord-gcc-switches -fPIC -I/usr/lib/python3.9/site-packages/numpy/core/include -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/ -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include -I/usr/include -I/usr/include -I/usr/include/stb -I/usr/include -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -I/usr/include/python3.9 -c mlpack/nca.cpp -o build/temp.linux-x86_64-3.9/mlpack/nca.o -DBINDING_TYPE=BINDING_TYPE_PYX -std=c++11 -fopenmp -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp
In file included from /usr/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h:1969,
from /usr/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h:12,
from /usr/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h:4,
from mlpack/nca.cpp:635:
/usr/lib/python3.9/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
17 | #warning "Using deprecated NumPy API, disable it with " \
| ^~~~~~~
x86_64-pc-linux-gnu-g++ -pthread -shared -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 -Os -pipe -march=native -frecord-gcc-switches build/temp.linux-x86_64-3.9/mlpack/nca.o -L/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib -L/usr/lib64 -o build/lib.linux-x86_64-3.9/mlpack/nca.cpython-39-x86_64-linux-gnu.so -fopenmp /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib/libmlpack.so /usr/lib64/libarmadillo.so
[447/628] /usr/bin/x86_64-pc-linux-gnu-g++ -DARMA_NO_DEBUG -DHAS_OPENMP -DHAS_STB -DNDEBUG -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include/stb -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -DBINDING_TYPE=BINDING_TYPE_PYX -std=gnu++11 -MD -MT src/mlpack/methods/neighbor_search/CMakeFiles/generate_pyx_knn.dir/__/__/bindings/python/generate_pyx_knn.cpp.o -MF src/mlpack/methods/neighbor_search/CMakeFiles/generate_pyx_knn.dir/__/__/bindings/python/generate_pyx_knn.cpp.o.d -o src/mlpack/methods/neighbor_search/CMakeFiles/generate_pyx_knn.dir/__/__/bindings/python/generate_pyx_knn.cpp.o -c /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/generate_pyx_knn.cpp
[448/628] /usr/bin/x86_64-pc-linux-gnu-g++ -DARMA_NO_DEBUG -DHAS_OPENMP -DHAS_STB -DNDEBUG -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include/stb -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -DBINDING_TYPE=BINDING_TYPE_R -std=gnu++11 -MD -MT src/mlpack/methods/neighbor_search/CMakeFiles/generate_r_kfn.dir/__/__/bindings/R/build/generate_r_kfn.cpp.o -MF src/mlpack/methods/neighbor_search/CMakeFiles/generate_r_kfn.dir/__/__/bindings/R/build/generate_r_kfn.cpp.o.d -o src/mlpack/methods/neighbor_search/CMakeFiles/generate_r_kfn.dir/__/__/bindings/R/build/generate_r_kfn.cpp.o -c /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/build/generate_r_kfn.cpp
[449/628] /usr/bin/x86_64-pc-linux-gnu-g++ -DARMA_NO_DEBUG -DHAS_OPENMP -DHAS_STB -DNDEBUG -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include/stb -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -DBINDING_TYPE=BINDING_TYPE_R -std=gnu++11 -MD -MT src/mlpack/methods/nmf/CMakeFiles/generate_r_nmf.dir/__/__/bindings/R/build/generate_r_nmf.cpp.o -MF src/mlpack/methods/nmf/CMakeFiles/generate_r_nmf.dir/__/__/bindings/R/build/generate_r_nmf.cpp.o.d -o src/mlpack/methods/nmf/CMakeFiles/generate_r_nmf.dir/__/__/bindings/R/build/generate_r_nmf.cpp.o -c /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/build/generate_r_nmf.cpp
[450/628] /usr/bin/x86_64-pc-linux-gnu-g++ -DARMA_NO_DEBUG -DHAS_OPENMP -DHAS_STB -DNDEBUG -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include/stb -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -DBINDING_TYPE=BINDING_TYPE_PYX -std=gnu++11 -MD -MT src/mlpack/methods/nmf/CMakeFiles/generate_pyx_nmf.dir/__/__/bindings/python/generate_pyx_nmf.cpp.o -MF src/mlpack/methods/nmf/CMakeFiles/generate_pyx_nmf.dir/__/__/bindings/python/generate_pyx_nmf.cpp.o.d -o src/mlpack/methods/nmf/CMakeFiles/generate_pyx_nmf.dir/__/__/bindings/python/generate_pyx_nmf.cpp.o -c /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/generate_pyx_nmf.cpp
[451/628] /usr/bin/x86_64-pc-linux-gnu-g++ -DARMA_NO_DEBUG -DHAS_OPENMP -DHAS_STB -DNDEBUG -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include/stb -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -DBINDING_TYPE=BINDING_TYPE_CLI -std=gnu++11 -MD -MT src/mlpack/methods/pca/CMakeFiles/mlpack_pca.dir/pca_main.cpp.o -MF src/mlpack/methods/pca/CMakeFiles/mlpack_pca.dir/pca_main.cpp.o.d -o src/mlpack/methods/pca/CMakeFiles/mlpack_pca.dir/pca_main.cpp.o -c /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/methods/pca/pca_main.cpp
[452/628] /usr/bin/x86_64-pc-linux-gnu-g++ -DARMA_NO_DEBUG -DHAS_OPENMP -DHAS_STB -DNDEBUG -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include/stb -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -DBINDING_TYPE=BINDING_TYPE_R -std=gnu++11 -MD -MT src/mlpack/methods/neighbor_search/CMakeFiles/generate_r_knn.dir/__/__/bindings/R/build/generate_r_knn.cpp.o -MF src/mlpack/methods/neighbor_search/CMakeFiles/generate_r_knn.dir/__/__/bindings/R/build/generate_r_knn.cpp.o.d -o src/mlpack/methods/neighbor_search/CMakeFiles/generate_r_knn.dir/__/__/bindings/R/build/generate_r_knn.cpp.o -c /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/build/generate_r_knn.cpp
[453/628] /usr/bin/x86_64-pc-linux-gnu-g++ -DARMA_NO_DEBUG -DHAS_OPENMP -DHAS_STB -DNDEBUG -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include/stb -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -DBINDING_TYPE=BINDING_TYPE_PYX -std=gnu++11 -MD -MT src/mlpack/methods/neighbor_search/CMakeFiles/generate_pyx_kfn.dir/__/__/bindings/python/generate_pyx_kfn.cpp.o -MF src/mlpack/methods/neighbor_search/CMakeFiles/generate_pyx_kfn.dir/__/__/bindings/python/generate_pyx_kfn.cpp.o.d -o src/mlpack/methods/neighbor_search/CMakeFiles/generate_pyx_kfn.dir/__/__/bindings/python/generate_pyx_kfn.cpp.o -c /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/generate_pyx_kfn.cpp
[454/628] /usr/bin/x86_64-pc-linux-gnu-g++ -DARMA_NO_DEBUG -DHAS_OPENMP -DHAS_STB -DNDEBUG -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include/stb -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -DBINDING_TYPE=BINDING_TYPE_CLI -std=gnu++11 -MD -MT src/mlpack/methods/neighbor_search/CMakeFiles/mlpack_knn.dir/knn_main.cpp.o -MF src/mlpack/methods/neighbor_search/CMakeFiles/mlpack_knn.dir/knn_main.cpp.o.d -o src/mlpack/methods/neighbor_search/CMakeFiles/mlpack_knn.dir/knn_main.cpp.o -c /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/methods/neighbor_search/knn_main.cpp
[455/628] cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/methods/pca && /usr/bin/cmake -DGENERATE_CPP_IN=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/python/generate_pyx.cpp.in -DGENERATE_CPP_OUT=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/generate_pyx_pca.cpp -DPROGRAM_MAIN_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/methods/pca/pca_main.cpp -DPROGRAM_NAME=pca -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/ConfigureFile.cmake
[456/628] cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/methods/pca && /usr/bin/cmake -DMODEL_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/mlpack/model.txt -DPROGRAM_NAME=pca -DPROGRAM_MAIN_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/methods/pca/pca_main.cpp -DSOURCE_DIR=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1 -DR_CPP_IN=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/R/r_method.cpp.in -DR_CPP_OUT=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/mlpack/src/pca.cpp -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/R/ConfigureRCPP.cmake
[457/628] : && /usr/bin/x86_64-pc-linux-gnu-g++ -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 src/mlpack/methods/nmf/CMakeFiles/mlpack_nmf.dir/nmf_main.cpp.o -o bin/mlpack_nmf -Wl,-rpath,/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib: lib/libmlpack.so.3.4 /usr/lib64/libarmadillo.so -lpthread /usr/lib/gcc/x86_64-pc-linux-gnu/11.2.0/libgomp.so /usr/lib64/libpthread.so && :
[458/628] : && /usr/bin/x86_64-pc-linux-gnu-g++ -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 src/mlpack/methods/nmf/CMakeFiles/generate_r_nmf.dir/__/__/bindings/R/build/generate_r_nmf.cpp.o src/mlpack/methods/nmf/CMakeFiles/generate_r_nmf.dir/__/__/bindings/R/print_R.cpp.o -o src/mlpack/bindings/R/build/bin/generate_r_nmf -Wl,-rpath,/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib lib/libmlpack.so.3.4 /usr/lib64/libarmadillo.so /usr/lib/gcc/x86_64-pc-linux-gnu/11.2.0/libgomp.so /usr/lib64/libpthread.so && cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/methods/nmf && /usr/bin/cmake -DGENERATE_BINDING_PROGRAM=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/build/bin/generate_r_nmf -DBINDING_OUTPUT_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/mlpack/R/nmf.R -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/GenerateBinding.cmake
[459/628] cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/methods/pca && /usr/bin/cmake -DNAME=pca -DGENERATE_CPP_IN=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/R/generate_R.cpp.in -DGENERATE_CPP_OUT=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/build/generate_r_pca.cpp -DPROGRAM_MAIN_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/methods/pca/pca_main.cpp -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/ConfigureFile.cmake
[460/628] : && /usr/bin/x86_64-pc-linux-gnu-g++ -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 src/mlpack/methods/pca/CMakeFiles/mlpack_pca.dir/pca_main.cpp.o -o bin/mlpack_pca -Wl,-rpath,/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib: lib/libmlpack.so.3.4 /usr/lib64/libarmadillo.so -lpthread /usr/lib/gcc/x86_64-pc-linux-gnu/11.2.0/libgomp.so /usr/lib64/libpthread.so && :
[461/628] : && /usr/bin/x86_64-pc-linux-gnu-g++ -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 src/mlpack/methods/neighbor_search/CMakeFiles/generate_r_kfn.dir/__/__/bindings/R/build/generate_r_kfn.cpp.o src/mlpack/methods/neighbor_search/CMakeFiles/generate_r_kfn.dir/__/__/bindings/R/print_R.cpp.o -o src/mlpack/bindings/R/build/bin/generate_r_kfn -Wl,-rpath,/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib lib/libmlpack.so.3.4 /usr/lib64/libarmadillo.so /usr/lib/gcc/x86_64-pc-linux-gnu/11.2.0/libgomp.so /usr/lib64/libpthread.so && cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/methods/neighbor_search && /usr/bin/cmake -DGENERATE_BINDING_PROGRAM=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/build/bin/generate_r_kfn -DBINDING_OUTPUT_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/mlpack/R/kfn.R -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/GenerateBinding.cmake
[462/628] : && /usr/bin/x86_64-pc-linux-gnu-g++ -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 src/mlpack/methods/neighbor_search/CMakeFiles/generate_r_knn.dir/__/__/bindings/R/build/generate_r_knn.cpp.o src/mlpack/methods/neighbor_search/CMakeFiles/generate_r_knn.dir/__/__/bindings/R/print_R.cpp.o -o src/mlpack/bindings/R/build/bin/generate_r_knn -Wl,-rpath,/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib lib/libmlpack.so.3.4 /usr/lib64/libarmadillo.so /usr/lib/gcc/x86_64-pc-linux-gnu/11.2.0/libgomp.so /usr/lib64/libpthread.so && cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/methods/neighbor_search && /usr/bin/cmake -DGENERATE_BINDING_PROGRAM=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/build/bin/generate_r_knn -DBINDING_OUTPUT_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/mlpack/R/knn.R -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/GenerateBinding.cmake
[463/628] : && /usr/bin/x86_64-pc-linux-gnu-g++ -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 src/mlpack/methods/neighbor_search/CMakeFiles/generate_pyx_kfn.dir/__/__/bindings/python/generate_pyx_kfn.cpp.o src/mlpack/methods/neighbor_search/CMakeFiles/generate_pyx_kfn.dir/__/__/bindings/python/print_pyx.cpp.o -o bin/generate_pyx_kfn -Wl,-rpath,/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib lib/libmlpack.so.3.4 /usr/lib64/libarmadillo.so /usr/lib/gcc/x86_64-pc-linux-gnu/11.2.0/libgomp.so /usr/lib64/libpthread.so && cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/methods/neighbor_search && /usr/bin/cmake -DPROGRAM=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/bin/generate_pyx_kfn -DOUTPUT_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/mlpack/kfn.pyx -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/RunProgram.cmake
[464/628] cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/methods/perceptron && /usr/bin/cmake -DMODEL_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/mlpack/model.txt -DPROGRAM_NAME=perceptron -DPROGRAM_MAIN_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/methods/perceptron/perceptron_main.cpp -DSOURCE_DIR=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1 -DR_CPP_IN=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/R/r_method.cpp.in -DR_CPP_OUT=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/mlpack/src/perceptron.cpp -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/R/ConfigureRCPP.cmake
[465/628] cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/methods/perceptron && /usr/bin/cmake -DGENERATE_CPP_IN=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/python/generate_pyx.cpp.in -DGENERATE_CPP_OUT=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/generate_pyx_perceptron.cpp -DPROGRAM_MAIN_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/methods/perceptron/perceptron_main.cpp -DPROGRAM_NAME=perceptron -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/ConfigureFile.cmake
[466/628] : && /usr/bin/x86_64-pc-linux-gnu-g++ -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 src/mlpack/methods/neighbor_search/CMakeFiles/generate_pyx_knn.dir/__/__/bindings/python/generate_pyx_knn.cpp.o src/mlpack/methods/neighbor_search/CMakeFiles/generate_pyx_knn.dir/__/__/bindings/python/print_pyx.cpp.o -o bin/generate_pyx_knn -Wl,-rpath,/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib lib/libmlpack.so.3.4 /usr/lib64/libarmadillo.so /usr/lib/gcc/x86_64-pc-linux-gnu/11.2.0/libgomp.so /usr/lib64/libpthread.so && cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/methods/neighbor_search && /usr/bin/cmake -DPROGRAM=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/bin/generate_pyx_knn -DOUTPUT_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/mlpack/knn.pyx -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/RunProgram.cmake
[467/628] cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/methods/perceptron && /usr/bin/cmake -DNAME=perceptron -DGENERATE_CPP_IN=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/R/generate_R.cpp.in -DGENERATE_CPP_OUT=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/build/generate_r_perceptron.cpp -DPROGRAM_MAIN_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/methods/perceptron/perceptron_main.cpp -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/ConfigureFile.cmake
[468/628] : && /usr/bin/x86_64-pc-linux-gnu-g++ -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 src/mlpack/methods/neighbor_search/CMakeFiles/mlpack_knn.dir/knn_main.cpp.o -o bin/mlpack_knn -Wl,-rpath,/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib: lib/libmlpack.so.3.4 /usr/lib64/libarmadillo.so -lpthread /usr/lib/gcc/x86_64-pc-linux-gnu/11.2.0/libgomp.so /usr/lib64/libpthread.so && :
[469/628] /usr/bin/x86_64-pc-linux-gnu-g++ -DARMA_NO_DEBUG -DHAS_OPENMP -DHAS_STB -DNDEBUG -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include/stb -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -DBINDING_TYPE=BINDING_TYPE_CLI -std=gnu++11 -MD -MT src/mlpack/methods/neighbor_search/CMakeFiles/mlpack_kfn.dir/kfn_main.cpp.o -MF src/mlpack/methods/neighbor_search/CMakeFiles/mlpack_kfn.dir/kfn_main.cpp.o.d -o src/mlpack/methods/neighbor_search/CMakeFiles/mlpack_kfn.dir/kfn_main.cpp.o -c /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/methods/neighbor_search/kfn_main.cpp
[470/628] : && /usr/bin/x86_64-pc-linux-gnu-g++ -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 src/mlpack/methods/neighbor_search/CMakeFiles/mlpack_kfn.dir/kfn_main.cpp.o -o bin/mlpack_kfn -Wl,-rpath,/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib: lib/libmlpack.so.3.4 /usr/lib64/libarmadillo.so -lpthread /usr/lib/gcc/x86_64-pc-linux-gnu/11.2.0/libgomp.so /usr/lib64/libpthread.so && :
[471/628] /usr/bin/x86_64-pc-linux-gnu-g++ -DARMA_NO_DEBUG -DHAS_OPENMP -DHAS_STB -DNDEBUG -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include/stb -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -DBINDING_TYPE=BINDING_TYPE_PYX -std=gnu++11 -MD -MT src/mlpack/methods/pca/CMakeFiles/generate_pyx_pca.dir/__/__/bindings/python/print_pyx.cpp.o -MF src/mlpack/methods/pca/CMakeFiles/generate_pyx_pca.dir/__/__/bindings/python/print_pyx.cpp.o.d -o src/mlpack/methods/pca/CMakeFiles/generate_pyx_pca.dir/__/__/bindings/python/print_pyx.cpp.o -c /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/python/print_pyx.cpp
[472/628] /usr/bin/x86_64-pc-linux-gnu-g++ -DARMA_NO_DEBUG -DHAS_OPENMP -DHAS_STB -DNDEBUG -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include/stb -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -DBINDING_TYPE=BINDING_TYPE_R -std=gnu++11 -MD -MT src/mlpack/methods/pca/CMakeFiles/generate_r_pca.dir/__/__/bindings/R/print_R.cpp.o -MF src/mlpack/methods/pca/CMakeFiles/generate_r_pca.dir/__/__/bindings/R/print_R.cpp.o.d -o src/mlpack/methods/pca/CMakeFiles/generate_r_pca.dir/__/__/bindings/R/print_R.cpp.o -c /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/R/print_R.cpp
[473/628] /usr/bin/x86_64-pc-linux-gnu-g++ -DARMA_NO_DEBUG -DHAS_OPENMP -DHAS_STB -DNDEBUG -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include/stb -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -DBINDING_TYPE=BINDING_TYPE_PYX -std=gnu++11 -MD -MT src/mlpack/methods/nmf/CMakeFiles/generate_pyx_nmf.dir/__/__/bindings/python/print_pyx.cpp.o -MF src/mlpack/methods/nmf/CMakeFiles/generate_pyx_nmf.dir/__/__/bindings/python/print_pyx.cpp.o.d -o src/mlpack/methods/nmf/CMakeFiles/generate_pyx_nmf.dir/__/__/bindings/python/print_pyx.cpp.o -c /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/python/print_pyx.cpp
[474/628] /usr/bin/x86_64-pc-linux-gnu-g++ -DARMA_NO_DEBUG -DHAS_OPENMP -DHAS_STB -DNDEBUG -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include/stb -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -DBINDING_TYPE=BINDING_TYPE_R -std=gnu++11 -MD -MT src/mlpack/methods/perceptron/CMakeFiles/generate_r_perceptron.dir/__/__/bindings/R/print_R.cpp.o -MF src/mlpack/methods/perceptron/CMakeFiles/generate_r_perceptron.dir/__/__/bindings/R/print_R.cpp.o.d -o src/mlpack/methods/perceptron/CMakeFiles/generate_r_perceptron.dir/__/__/bindings/R/print_R.cpp.o -c /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/R/print_R.cpp
[475/628] : && /usr/bin/x86_64-pc-linux-gnu-g++ -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 src/mlpack/methods/nmf/CMakeFiles/generate_pyx_nmf.dir/__/__/bindings/python/generate_pyx_nmf.cpp.o src/mlpack/methods/nmf/CMakeFiles/generate_pyx_nmf.dir/__/__/bindings/python/print_pyx.cpp.o -o bin/generate_pyx_nmf -Wl,-rpath,/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib lib/libmlpack.so.3.4 /usr/lib64/libarmadillo.so /usr/lib/gcc/x86_64-pc-linux-gnu/11.2.0/libgomp.so /usr/lib64/libpthread.so && cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/methods/nmf && /usr/bin/cmake -DPROGRAM=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/bin/generate_pyx_nmf -DOUTPUT_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/mlpack/nmf.pyx -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/RunProgram.cmake
[476/628] /usr/bin/x86_64-pc-linux-gnu-g++ -DARMA_NO_DEBUG -DHAS_OPENMP -DHAS_STB -DNDEBUG -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include/stb -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -DBINDING_TYPE=BINDING_TYPE_PYX -std=gnu++11 -MD -MT src/mlpack/methods/perceptron/CMakeFiles/generate_pyx_perceptron.dir/__/__/bindings/python/print_pyx.cpp.o -MF src/mlpack/methods/perceptron/CMakeFiles/generate_pyx_perceptron.dir/__/__/bindings/python/print_pyx.cpp.o.d -o src/mlpack/methods/perceptron/CMakeFiles/generate_pyx_perceptron.dir/__/__/bindings/python/print_pyx.cpp.o -c /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/python/print_pyx.cpp
[477/628] /usr/bin/x86_64-pc-linux-gnu-g++ -DARMA_NO_DEBUG -DHAS_OPENMP -DHAS_STB -DNDEBUG -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include/stb -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -DBINDING_TYPE=BINDING_TYPE_PYX -std=gnu++11 -MD -MT src/mlpack/methods/pca/CMakeFiles/generate_pyx_pca.dir/__/__/bindings/python/generate_pyx_pca.cpp.o -MF src/mlpack/methods/pca/CMakeFiles/generate_pyx_pca.dir/__/__/bindings/python/generate_pyx_pca.cpp.o.d -o src/mlpack/methods/pca/CMakeFiles/generate_pyx_pca.dir/__/__/bindings/python/generate_pyx_pca.cpp.o -c /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/generate_pyx_pca.cpp
[478/628] /usr/bin/x86_64-pc-linux-gnu-g++ -DARMA_NO_DEBUG -DHAS_OPENMP -DHAS_STB -DNDEBUG -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include/stb -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -DBINDING_TYPE=BINDING_TYPE_R -std=gnu++11 -MD -MT src/mlpack/methods/perceptron/CMakeFiles/generate_r_perceptron.dir/__/__/bindings/R/build/generate_r_perceptron.cpp.o -MF src/mlpack/methods/perceptron/CMakeFiles/generate_r_perceptron.dir/__/__/bindings/R/build/generate_r_perceptron.cpp.o.d -o src/mlpack/methods/perceptron/CMakeFiles/generate_r_perceptron.dir/__/__/bindings/R/build/generate_r_perceptron.cpp.o -c /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/build/generate_r_perceptron.cpp
[479/628] /usr/bin/x86_64-pc-linux-gnu-g++ -DARMA_NO_DEBUG -DHAS_OPENMP -DHAS_STB -DNDEBUG -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include/stb -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -DBINDING_TYPE=BINDING_TYPE_R -std=gnu++11 -MD -MT src/mlpack/methods/pca/CMakeFiles/generate_r_pca.dir/__/__/bindings/R/build/generate_r_pca.cpp.o -MF src/mlpack/methods/pca/CMakeFiles/generate_r_pca.dir/__/__/bindings/R/build/generate_r_pca.cpp.o.d -o src/mlpack/methods/pca/CMakeFiles/generate_r_pca.dir/__/__/bindings/R/build/generate_r_pca.cpp.o -c /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/build/generate_r_pca.cpp
[480/628] : && /usr/bin/x86_64-pc-linux-gnu-g++ -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 src/mlpack/methods/pca/CMakeFiles/generate_pyx_pca.dir/__/__/bindings/python/generate_pyx_pca.cpp.o src/mlpack/methods/pca/CMakeFiles/generate_pyx_pca.dir/__/__/bindings/python/print_pyx.cpp.o -o bin/generate_pyx_pca -Wl,-rpath,/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib lib/libmlpack.so.3.4 /usr/lib64/libarmadillo.so /usr/lib/gcc/x86_64-pc-linux-gnu/11.2.0/libgomp.so /usr/lib64/libpthread.so && cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/methods/pca && /usr/bin/cmake -DPROGRAM=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/bin/generate_pyx_pca -DOUTPUT_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/mlpack/pca.pyx -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/RunProgram.cmake
[481/628] : && /usr/bin/x86_64-pc-linux-gnu-g++ -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 src/mlpack/methods/perceptron/CMakeFiles/generate_r_perceptron.dir/__/__/bindings/R/build/generate_r_perceptron.cpp.o src/mlpack/methods/perceptron/CMakeFiles/generate_r_perceptron.dir/__/__/bindings/R/print_R.cpp.o -o src/mlpack/bindings/R/build/bin/generate_r_perceptron -Wl,-rpath,/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib lib/libmlpack.so.3.4 /usr/lib64/libarmadillo.so /usr/lib/gcc/x86_64-pc-linux-gnu/11.2.0/libgomp.so /usr/lib64/libpthread.so && cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/methods/perceptron && /usr/bin/cmake -DGENERATE_BINDING_PROGRAM=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/build/bin/generate_r_perceptron -DBINDING_OUTPUT_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/mlpack/R/perceptron.R -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/GenerateBinding.cmake
[482/628] : && /usr/bin/x86_64-pc-linux-gnu-g++ -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 src/mlpack/methods/pca/CMakeFiles/generate_r_pca.dir/__/__/bindings/R/build/generate_r_pca.cpp.o src/mlpack/methods/pca/CMakeFiles/generate_r_pca.dir/__/__/bindings/R/print_R.cpp.o -o src/mlpack/bindings/R/build/bin/generate_r_pca -Wl,-rpath,/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib lib/libmlpack.so.3.4 /usr/lib64/libarmadillo.so /usr/lib/gcc/x86_64-pc-linux-gnu/11.2.0/libgomp.so /usr/lib64/libpthread.so && cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/methods/pca && /usr/bin/cmake -DGENERATE_BINDING_PROGRAM=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/build/bin/generate_r_pca -DBINDING_OUTPUT_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/mlpack/R/pca.R -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/GenerateBinding.cmake
[483/628] /usr/bin/x86_64-pc-linux-gnu-g++ -DARMA_NO_DEBUG -DHAS_OPENMP -DHAS_STB -DNDEBUG -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include/stb -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -DBINDING_TYPE=BINDING_TYPE_PYX -std=gnu++11 -MD -MT src/mlpack/methods/perceptron/CMakeFiles/generate_pyx_perceptron.dir/__/__/bindings/python/generate_pyx_perceptron.cpp.o -MF src/mlpack/methods/perceptron/CMakeFiles/generate_pyx_perceptron.dir/__/__/bindings/python/generate_pyx_perceptron.cpp.o.d -o src/mlpack/methods/perceptron/CMakeFiles/generate_pyx_perceptron.dir/__/__/bindings/python/generate_pyx_perceptron.cpp.o -c /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/generate_pyx_perceptron.cpp
[484/628] : && /usr/bin/x86_64-pc-linux-gnu-g++ -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 src/mlpack/methods/perceptron/CMakeFiles/generate_pyx_perceptron.dir/__/__/bindings/python/generate_pyx_perceptron.cpp.o src/mlpack/methods/perceptron/CMakeFiles/generate_pyx_perceptron.dir/__/__/bindings/python/print_pyx.cpp.o -o bin/generate_pyx_perceptron -Wl,-rpath,/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib lib/libmlpack.so.3.4 /usr/lib64/libarmadillo.so /usr/lib/gcc/x86_64-pc-linux-gnu/11.2.0/libgomp.so /usr/lib64/libpthread.so && cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/methods/perceptron && /usr/bin/cmake -DPROGRAM=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/bin/generate_pyx_perceptron -DOUTPUT_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/mlpack/perceptron.pyx -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/RunProgram.cmake
[485/628] /usr/bin/x86_64-pc-linux-gnu-g++ -DARMA_NO_DEBUG -DHAS_OPENMP -DHAS_STB -DNDEBUG -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include/stb -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -DBINDING_TYPE=BINDING_TYPE_CLI -std=gnu++11 -MD -MT src/mlpack/methods/perceptron/CMakeFiles/mlpack_perceptron.dir/perceptron_main.cpp.o -MF src/mlpack/methods/perceptron/CMakeFiles/mlpack_perceptron.dir/perceptron_main.cpp.o.d -o src/mlpack/methods/perceptron/CMakeFiles/mlpack_perceptron.dir/perceptron_main.cpp.o -c /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/methods/perceptron/perceptron_main.cpp
[486/628] : && /usr/bin/x86_64-pc-linux-gnu-g++ -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 src/mlpack/methods/perceptron/CMakeFiles/mlpack_perceptron.dir/perceptron_main.cpp.o -o bin/mlpack_perceptron -Wl,-rpath,/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib: lib/libmlpack.so.3.4 /usr/lib64/libarmadillo.so -lpthread /usr/lib/gcc/x86_64-pc-linux-gnu/11.2.0/libgomp.so /usr/lib64/libpthread.so && :
[487/628] cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python && /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/temp/python3.9/bin/python /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/setup.py build_ext --module=nmf.pyx
running build_ext
cythoning mlpack/nmf.pyx to mlpack/nmf.cpp
/usr/lib/python3.9/site-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/mlpack/nmf.pyx
tree = Parsing.p_module(s, pxd, full_module_name)
building 'mlpack.nmf' extension
x86_64-pc-linux-gnu-g++ -pthread -Os -pipe -march=native -frecord-gcc-switches -fPIC -I/usr/lib/python3.9/site-packages/numpy/core/include -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/ -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include -I/usr/include -I/usr/include -I/usr/include/stb -I/usr/include -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -I/usr/include/python3.9 -c mlpack/nmf.cpp -o build/temp.linux-x86_64-3.9/mlpack/nmf.o -DBINDING_TYPE=BINDING_TYPE_PYX -std=c++11 -fopenmp -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp
In file included from /usr/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h:1969,
from /usr/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h:12,
from /usr/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h:4,
from mlpack/nmf.cpp:635:
/usr/lib/python3.9/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
17 | #warning "Using deprecated NumPy API, disable it with " \
| ^~~~~~~
x86_64-pc-linux-gnu-g++ -pthread -shared -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 -Os -pipe -march=native -frecord-gcc-switches build/temp.linux-x86_64-3.9/mlpack/nmf.o -L/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib -L/usr/lib64 -o build/lib.linux-x86_64-3.9/mlpack/nmf.cpython-39-x86_64-linux-gnu.so -fopenmp /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib/libmlpack.so /usr/lib64/libarmadillo.so
[488/628] cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/methods/preprocess && /usr/bin/cmake -DGENERATE_CPP_IN=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/python/generate_pyx.cpp.in -DGENERATE_CPP_OUT=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/generate_pyx_preprocess_binarize.cpp -DPROGRAM_MAIN_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/methods/preprocess/preprocess_binarize_main.cpp -DPROGRAM_NAME=preprocess_binarize -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/ConfigureFile.cmake
[489/628] /usr/bin/x86_64-pc-linux-gnu-g++ -DARMA_NO_DEBUG -DHAS_OPENMP -DHAS_STB -DNDEBUG -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include/stb -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -DBINDING_TYPE=BINDING_TYPE_CLI -std=gnu++11 -MD -MT src/mlpack/methods/preprocess/CMakeFiles/mlpack_preprocess_binarize.dir/preprocess_binarize_main.cpp.o -MF src/mlpack/methods/preprocess/CMakeFiles/mlpack_preprocess_binarize.dir/preprocess_binarize_main.cpp.o.d -o src/mlpack/methods/preprocess/CMakeFiles/mlpack_preprocess_binarize.dir/preprocess_binarize_main.cpp.o -c /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/methods/preprocess/preprocess_binarize_main.cpp
[490/628] cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python && /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/temp/python3.9/bin/python /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/setup.py build_ext --module=pca.pyx
running build_ext
cythoning mlpack/pca.pyx to mlpack/pca.cpp
/usr/lib/python3.9/site-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/mlpack/pca.pyx
tree = Parsing.p_module(s, pxd, full_module_name)
building 'mlpack.pca' extension
x86_64-pc-linux-gnu-g++ -pthread -Os -pipe -march=native -frecord-gcc-switches -fPIC -I/usr/lib/python3.9/site-packages/numpy/core/include -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/ -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include -I/usr/include -I/usr/include -I/usr/include/stb -I/usr/include -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -I/usr/include/python3.9 -c mlpack/pca.cpp -o build/temp.linux-x86_64-3.9/mlpack/pca.o -DBINDING_TYPE=BINDING_TYPE_PYX -std=c++11 -fopenmp -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp
In file included from /usr/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h:1969,
from /usr/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h:12,
from /usr/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h:4,
from mlpack/pca.cpp:635:
/usr/lib/python3.9/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
17 | #warning "Using deprecated NumPy API, disable it with " \
| ^~~~~~~
x86_64-pc-linux-gnu-g++ -pthread -shared -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 -Os -pipe -march=native -frecord-gcc-switches build/temp.linux-x86_64-3.9/mlpack/pca.o -L/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib -L/usr/lib64 -o build/lib.linux-x86_64-3.9/mlpack/pca.cpython-39-x86_64-linux-gnu.so -fopenmp /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib/libmlpack.so /usr/lib64/libarmadillo.so
[491/628] : && /usr/bin/x86_64-pc-linux-gnu-g++ -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 src/mlpack/methods/preprocess/CMakeFiles/mlpack_preprocess_binarize.dir/preprocess_binarize_main.cpp.o -o bin/mlpack_preprocess_binarize -Wl,-rpath,/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib: lib/libmlpack.so.3.4 /usr/lib64/libarmadillo.so -lpthread /usr/lib/gcc/x86_64-pc-linux-gnu/11.2.0/libgomp.so /usr/lib64/libpthread.so && :
[492/628] cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/methods/preprocess && /usr/bin/cmake -DMODEL_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/mlpack/model.txt -DPROGRAM_NAME=preprocess_binarize -DPROGRAM_MAIN_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/methods/preprocess/preprocess_binarize_main.cpp -DSOURCE_DIR=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1 -DR_CPP_IN=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/R/r_method.cpp.in -DR_CPP_OUT=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/mlpack/src/preprocess_binarize.cpp -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/R/ConfigureRCPP.cmake
[493/628] cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/methods/preprocess && /usr/bin/cmake -DNAME=preprocess_binarize -DGENERATE_CPP_IN=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/R/generate_R.cpp.in -DGENERATE_CPP_OUT=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/build/generate_r_preprocess_binarize.cpp -DPROGRAM_MAIN_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/methods/preprocess/preprocess_binarize_main.cpp -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/ConfigureFile.cmake
[494/628] /usr/bin/x86_64-pc-linux-gnu-g++ -DARMA_NO_DEBUG -DHAS_OPENMP -DHAS_STB -DNDEBUG -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include/stb -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -DBINDING_TYPE=BINDING_TYPE_CLI -std=gnu++11 -MD -MT src/mlpack/methods/preprocess/CMakeFiles/mlpack_preprocess_split.dir/preprocess_split_main.cpp.o -MF src/mlpack/methods/preprocess/CMakeFiles/mlpack_preprocess_split.dir/preprocess_split_main.cpp.o.d -o src/mlpack/methods/preprocess/CMakeFiles/mlpack_preprocess_split.dir/preprocess_split_main.cpp.o -c /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/methods/preprocess/preprocess_split_main.cpp
[495/628] /usr/bin/x86_64-pc-linux-gnu-g++ -DARMA_NO_DEBUG -DHAS_OPENMP -DHAS_STB -DNDEBUG -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include/stb -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -DBINDING_TYPE=BINDING_TYPE_CLI -std=gnu++11 -MD -MT src/mlpack/methods/preprocess/CMakeFiles/mlpack_image_converter.dir/image_converter_main.cpp.o -MF src/mlpack/methods/preprocess/CMakeFiles/mlpack_image_converter.dir/image_converter_main.cpp.o.d -o src/mlpack/methods/preprocess/CMakeFiles/mlpack_image_converter.dir/image_converter_main.cpp.o -c /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/methods/preprocess/image_converter_main.cpp
[496/628] /usr/bin/x86_64-pc-linux-gnu-g++ -DARMA_NO_DEBUG -DHAS_OPENMP -DHAS_STB -DNDEBUG -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include/stb -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -DBINDING_TYPE=BINDING_TYPE_CLI -std=gnu++11 -MD -MT src/mlpack/methods/preprocess/CMakeFiles/mlpack_preprocess_one_hot_encoding.dir/preprocess_one_hot_encoding_main.cpp.o -MF src/mlpack/methods/preprocess/CMakeFiles/mlpack_preprocess_one_hot_encoding.dir/preprocess_one_hot_encoding_main.cpp.o.d -o src/mlpack/methods/preprocess/CMakeFiles/mlpack_preprocess_one_hot_encoding.dir/preprocess_one_hot_encoding_main.cpp.o -c /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/methods/preprocess/preprocess_one_hot_encoding_main.cpp
[497/628] : && /usr/bin/x86_64-pc-linux-gnu-g++ -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 src/mlpack/methods/preprocess/CMakeFiles/mlpack_preprocess_split.dir/preprocess_split_main.cpp.o -o bin/mlpack_preprocess_split -Wl,-rpath,/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib: lib/libmlpack.so.3.4 /usr/lib64/libarmadillo.so -lpthread /usr/lib/gcc/x86_64-pc-linux-gnu/11.2.0/libgomp.so /usr/lib64/libpthread.so && :
[498/628] : && /usr/bin/x86_64-pc-linux-gnu-g++ -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 src/mlpack/methods/preprocess/CMakeFiles/mlpack_image_converter.dir/image_converter_main.cpp.o -o bin/mlpack_image_converter -Wl,-rpath,/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib: lib/libmlpack.so.3.4 /usr/lib64/libarmadillo.so -lpthread /usr/lib/gcc/x86_64-pc-linux-gnu/11.2.0/libgomp.so /usr/lib64/libpthread.so && :
[499/628] cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/methods/preprocess && /usr/bin/cmake -DMODEL_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/mlpack/model.txt -DPROGRAM_NAME=preprocess_split -DPROGRAM_MAIN_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/methods/preprocess/preprocess_split_main.cpp -DSOURCE_DIR=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1 -DR_CPP_IN=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/R/r_method.cpp.in -DR_CPP_OUT=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/mlpack/src/preprocess_split.cpp -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/R/ConfigureRCPP.cmake
[500/628] cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/methods/preprocess && /usr/bin/cmake -DNAME=preprocess_split -DGENERATE_CPP_IN=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/R/generate_R.cpp.in -DGENERATE_CPP_OUT=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/build/generate_r_preprocess_split.cpp -DPROGRAM_MAIN_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/methods/preprocess/preprocess_split_main.cpp -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/ConfigureFile.cmake
[501/628] : && /usr/bin/x86_64-pc-linux-gnu-g++ -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 src/mlpack/methods/preprocess/CMakeFiles/mlpack_preprocess_one_hot_encoding.dir/preprocess_one_hot_encoding_main.cpp.o -o bin/mlpack_preprocess_one_hot_encoding -Wl,-rpath,/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib: lib/libmlpack.so.3.4 /usr/lib64/libarmadillo.so -lpthread /usr/lib/gcc/x86_64-pc-linux-gnu/11.2.0/libgomp.so /usr/lib64/libpthread.so && :
[502/628] cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python && /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/temp/python3.9/bin/python /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/setup.py build_ext --module=perceptron.pyx
running build_ext
cythoning mlpack/perceptron.pyx to mlpack/perceptron.cpp
/usr/lib/python3.9/site-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/mlpack/perceptron.pyx
tree = Parsing.p_module(s, pxd, full_module_name)
building 'mlpack.perceptron' extension
x86_64-pc-linux-gnu-g++ -pthread -Os -pipe -march=native -frecord-gcc-switches -fPIC -I/usr/lib/python3.9/site-packages/numpy/core/include -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/ -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include -I/usr/include -I/usr/include -I/usr/include/stb -I/usr/include -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -I/usr/include/python3.9 -c mlpack/perceptron.cpp -o build/temp.linux-x86_64-3.9/mlpack/perceptron.o -DBINDING_TYPE=BINDING_TYPE_PYX -std=c++11 -fopenmp -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp
In file included from /usr/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h:1969,
from /usr/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h:12,
from /usr/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h:4,
from mlpack/perceptron.cpp:635:
/usr/lib/python3.9/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
17 | #warning "Using deprecated NumPy API, disable it with " \
| ^~~~~~~
x86_64-pc-linux-gnu-g++ -pthread -shared -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 -Os -pipe -march=native -frecord-gcc-switches build/temp.linux-x86_64-3.9/mlpack/perceptron.o -L/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib -L/usr/lib64 -o build/lib.linux-x86_64-3.9/mlpack/perceptron.cpython-39-x86_64-linux-gnu.so -fopenmp /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib/libmlpack.so /usr/lib64/libarmadillo.so
[503/628] cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/methods/preprocess && /usr/bin/cmake -DMODEL_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/mlpack/model.txt -DPROGRAM_NAME=preprocess_describe -DPROGRAM_MAIN_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/methods/preprocess/preprocess_describe_main.cpp -DSOURCE_DIR=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1 -DR_CPP_IN=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/R/r_method.cpp.in -DR_CPP_OUT=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/mlpack/src/preprocess_describe.cpp -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/R/ConfigureRCPP.cmake
[504/628] cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/methods/preprocess && /usr/bin/cmake -DNAME=preprocess_describe -DGENERATE_CPP_IN=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/R/generate_R.cpp.in -DGENERATE_CPP_OUT=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/build/generate_r_preprocess_describe.cpp -DPROGRAM_MAIN_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/methods/preprocess/preprocess_describe_main.cpp -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/ConfigureFile.cmake
[505/628] /usr/bin/x86_64-pc-linux-gnu-g++ -DARMA_NO_DEBUG -DHAS_OPENMP -DHAS_STB -DNDEBUG -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include/stb -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -DBINDING_TYPE=BINDING_TYPE_PYX -std=gnu++11 -MD -MT src/mlpack/methods/preprocess/CMakeFiles/generate_pyx_preprocess_binarize.dir/__/__/bindings/python/print_pyx.cpp.o -MF src/mlpack/methods/preprocess/CMakeFiles/generate_pyx_preprocess_binarize.dir/__/__/bindings/python/print_pyx.cpp.o.d -o src/mlpack/methods/preprocess/CMakeFiles/generate_pyx_preprocess_binarize.dir/__/__/bindings/python/print_pyx.cpp.o -c /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/python/print_pyx.cpp
[506/628] /usr/bin/x86_64-pc-linux-gnu-g++ -DARMA_NO_DEBUG -DHAS_OPENMP -DHAS_STB -DNDEBUG -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include/stb -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -DBINDING_TYPE=BINDING_TYPE_PYX -std=gnu++11 -MD -MT src/mlpack/methods/preprocess/CMakeFiles/generate_pyx_preprocess_binarize.dir/__/__/bindings/python/generate_pyx_preprocess_binarize.cpp.o -MF src/mlpack/methods/preprocess/CMakeFiles/generate_pyx_preprocess_binarize.dir/__/__/bindings/python/generate_pyx_preprocess_binarize.cpp.o.d -o src/mlpack/methods/preprocess/CMakeFiles/generate_pyx_preprocess_binarize.dir/__/__/bindings/python/generate_pyx_preprocess_binarize.cpp.o -c /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/generate_pyx_preprocess_binarize.cpp
[507/628] /usr/bin/x86_64-pc-linux-gnu-g++ -DARMA_NO_DEBUG -DHAS_OPENMP -DHAS_STB -DNDEBUG -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include/stb -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -DBINDING_TYPE=BINDING_TYPE_CLI -std=gnu++11 -MD -MT src/mlpack/methods/preprocess/CMakeFiles/mlpack_preprocess_imputer.dir/preprocess_imputer_main.cpp.o -MF src/mlpack/methods/preprocess/CMakeFiles/mlpack_preprocess_imputer.dir/preprocess_imputer_main.cpp.o.d -o src/mlpack/methods/preprocess/CMakeFiles/mlpack_preprocess_imputer.dir/preprocess_imputer_main.cpp.o -c /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/methods/preprocess/preprocess_imputer_main.cpp
[508/628] : && /usr/bin/x86_64-pc-linux-gnu-g++ -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 src/mlpack/methods/preprocess/CMakeFiles/generate_pyx_preprocess_binarize.dir/__/__/bindings/python/generate_pyx_preprocess_binarize.cpp.o src/mlpack/methods/preprocess/CMakeFiles/generate_pyx_preprocess_binarize.dir/__/__/bindings/python/print_pyx.cpp.o -o bin/generate_pyx_preprocess_binarize -Wl,-rpath,/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib lib/libmlpack.so.3.4 /usr/lib64/libarmadillo.so /usr/lib/gcc/x86_64-pc-linux-gnu/11.2.0/libgomp.so /usr/lib64/libpthread.so && cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/methods/preprocess && /usr/bin/cmake -DPROGRAM=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/bin/generate_pyx_preprocess_binarize -DOUTPUT_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/mlpack/preprocess_binarize.pyx -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/RunProgram.cmake
[509/628] : && /usr/bin/x86_64-pc-linux-gnu-g++ -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 src/mlpack/methods/preprocess/CMakeFiles/mlpack_preprocess_imputer.dir/preprocess_imputer_main.cpp.o -o bin/mlpack_preprocess_imputer -Wl,-rpath,/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib: lib/libmlpack.so.3.4 /usr/lib64/libarmadillo.so -lpthread /usr/lib/gcc/x86_64-pc-linux-gnu/11.2.0/libgomp.so /usr/lib64/libpthread.so && :
[510/628] cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/methods/preprocess && /usr/bin/cmake -DGENERATE_CPP_IN=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/python/generate_pyx.cpp.in -DGENERATE_CPP_OUT=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/generate_pyx_preprocess_split.cpp -DPROGRAM_MAIN_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/methods/preprocess/preprocess_split_main.cpp -DPROGRAM_NAME=preprocess_split -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/ConfigureFile.cmake
[511/628] /usr/bin/x86_64-pc-linux-gnu-g++ -DARMA_NO_DEBUG -DHAS_OPENMP -DHAS_STB -DNDEBUG -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include/stb -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -DBINDING_TYPE=BINDING_TYPE_CLI -std=gnu++11 -MD -MT src/mlpack/methods/preprocess/CMakeFiles/mlpack_preprocess_scale.dir/preprocess_scale_main.cpp.o -MF src/mlpack/methods/preprocess/CMakeFiles/mlpack_preprocess_scale.dir/preprocess_scale_main.cpp.o.d -o src/mlpack/methods/preprocess/CMakeFiles/mlpack_preprocess_scale.dir/preprocess_scale_main.cpp.o -c /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/methods/preprocess/preprocess_scale_main.cpp
[512/628] : && /usr/bin/x86_64-pc-linux-gnu-g++ -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 src/mlpack/methods/preprocess/CMakeFiles/mlpack_preprocess_scale.dir/preprocess_scale_main.cpp.o -o bin/mlpack_preprocess_scale -Wl,-rpath,/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib: lib/libmlpack.so.3.4 /usr/lib64/libarmadillo.so -lpthread /usr/lib/gcc/x86_64-pc-linux-gnu/11.2.0/libgomp.so /usr/lib64/libpthread.so && :
[513/628] /usr/bin/x86_64-pc-linux-gnu-g++ -DARMA_NO_DEBUG -DHAS_OPENMP -DHAS_STB -DNDEBUG -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include/stb -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -DBINDING_TYPE=BINDING_TYPE_R -std=gnu++11 -MD -MT src/mlpack/methods/preprocess/CMakeFiles/generate_r_preprocess_binarize.dir/__/__/bindings/R/print_R.cpp.o -MF src/mlpack/methods/preprocess/CMakeFiles/generate_r_preprocess_binarize.dir/__/__/bindings/R/print_R.cpp.o.d -o src/mlpack/methods/preprocess/CMakeFiles/generate_r_preprocess_binarize.dir/__/__/bindings/R/print_R.cpp.o -c /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/R/print_R.cpp
[514/628] cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/methods/preprocess && /usr/bin/cmake -DGENERATE_CPP_IN=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/python/generate_pyx.cpp.in -DGENERATE_CPP_OUT=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/generate_pyx_preprocess_describe.cpp -DPROGRAM_MAIN_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/methods/preprocess/preprocess_describe_main.cpp -DPROGRAM_NAME=preprocess_describe -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/ConfigureFile.cmake
[515/628] /usr/bin/x86_64-pc-linux-gnu-g++ -DARMA_NO_DEBUG -DHAS_OPENMP -DHAS_STB -DNDEBUG -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include/stb -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -DBINDING_TYPE=BINDING_TYPE_R -std=gnu++11 -MD -MT src/mlpack/methods/preprocess/CMakeFiles/generate_r_preprocess_binarize.dir/__/__/bindings/R/build/generate_r_preprocess_binarize.cpp.o -MF src/mlpack/methods/preprocess/CMakeFiles/generate_r_preprocess_binarize.dir/__/__/bindings/R/build/generate_r_preprocess_binarize.cpp.o.d -o src/mlpack/methods/preprocess/CMakeFiles/generate_r_preprocess_binarize.dir/__/__/bindings/R/build/generate_r_preprocess_binarize.cpp.o -c /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/build/generate_r_preprocess_binarize.cpp
[516/628] /usr/bin/x86_64-pc-linux-gnu-g++ -DARMA_NO_DEBUG -DHAS_OPENMP -DHAS_STB -DNDEBUG -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include/stb -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -DBINDING_TYPE=BINDING_TYPE_R -std=gnu++11 -MD -MT src/mlpack/methods/preprocess/CMakeFiles/generate_r_preprocess_split.dir/__/__/bindings/R/print_R.cpp.o -MF src/mlpack/methods/preprocess/CMakeFiles/generate_r_preprocess_split.dir/__/__/bindings/R/print_R.cpp.o.d -o src/mlpack/methods/preprocess/CMakeFiles/generate_r_preprocess_split.dir/__/__/bindings/R/print_R.cpp.o -c /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/R/print_R.cpp
[517/628] : && /usr/bin/x86_64-pc-linux-gnu-g++ -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 src/mlpack/methods/preprocess/CMakeFiles/generate_r_preprocess_binarize.dir/__/__/bindings/R/build/generate_r_preprocess_binarize.cpp.o src/mlpack/methods/preprocess/CMakeFiles/generate_r_preprocess_binarize.dir/__/__/bindings/R/print_R.cpp.o -o src/mlpack/bindings/R/build/bin/generate_r_preprocess_binarize -Wl,-rpath,/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib lib/libmlpack.so.3.4 /usr/lib64/libarmadillo.so /usr/lib/gcc/x86_64-pc-linux-gnu/11.2.0/libgomp.so /usr/lib64/libpthread.so && cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/methods/preprocess && /usr/bin/cmake -DGENERATE_BINDING_PROGRAM=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/build/bin/generate_r_preprocess_binarize -DBINDING_OUTPUT_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/mlpack/R/preprocess_binarize.R -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/GenerateBinding.cmake
[518/628] cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/methods/preprocess && /usr/bin/cmake -DGENERATE_CPP_IN=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/python/generate_pyx.cpp.in -DGENERATE_CPP_OUT=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/generate_pyx_preprocess_scale.cpp -DPROGRAM_MAIN_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/methods/preprocess/preprocess_scale_main.cpp -DPROGRAM_NAME=preprocess_scale -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/ConfigureFile.cmake
[519/628] /usr/bin/x86_64-pc-linux-gnu-g++ -DARMA_NO_DEBUG -DHAS_OPENMP -DHAS_STB -DNDEBUG -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include/stb -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -DBINDING_TYPE=BINDING_TYPE_CLI -std=gnu++11 -MD -MT src/mlpack/methods/preprocess/CMakeFiles/mlpack_preprocess_describe.dir/preprocess_describe_main.cpp.o -MF src/mlpack/methods/preprocess/CMakeFiles/mlpack_preprocess_describe.dir/preprocess_describe_main.cpp.o.d -o src/mlpack/methods/preprocess/CMakeFiles/mlpack_preprocess_describe.dir/preprocess_describe_main.cpp.o -c /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/methods/preprocess/preprocess_describe_main.cpp
[520/628] /usr/bin/x86_64-pc-linux-gnu-g++ -DARMA_NO_DEBUG -DHAS_OPENMP -DHAS_STB -DNDEBUG -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include/stb -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -DBINDING_TYPE=BINDING_TYPE_R -std=gnu++11 -MD -MT src/mlpack/methods/preprocess/CMakeFiles/generate_r_preprocess_split.dir/__/__/bindings/R/build/generate_r_preprocess_split.cpp.o -MF src/mlpack/methods/preprocess/CMakeFiles/generate_r_preprocess_split.dir/__/__/bindings/R/build/generate_r_preprocess_split.cpp.o.d -o src/mlpack/methods/preprocess/CMakeFiles/generate_r_preprocess_split.dir/__/__/bindings/R/build/generate_r_preprocess_split.cpp.o -c /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/build/generate_r_preprocess_split.cpp
[521/628] /usr/bin/x86_64-pc-linux-gnu-g++ -DARMA_NO_DEBUG -DHAS_OPENMP -DHAS_STB -DNDEBUG -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include/stb -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -DBINDING_TYPE=BINDING_TYPE_R -std=gnu++11 -MD -MT src/mlpack/methods/preprocess/CMakeFiles/generate_r_preprocess_describe.dir/__/__/bindings/R/build/generate_r_preprocess_describe.cpp.o -MF src/mlpack/methods/preprocess/CMakeFiles/generate_r_preprocess_describe.dir/__/__/bindings/R/build/generate_r_preprocess_describe.cpp.o.d -o src/mlpack/methods/preprocess/CMakeFiles/generate_r_preprocess_describe.dir/__/__/bindings/R/build/generate_r_preprocess_describe.cpp.o -c /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/build/generate_r_preprocess_describe.cpp
[522/628] : && /usr/bin/x86_64-pc-linux-gnu-g++ -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 src/mlpack/methods/preprocess/CMakeFiles/generate_r_preprocess_split.dir/__/__/bindings/R/build/generate_r_preprocess_split.cpp.o src/mlpack/methods/preprocess/CMakeFiles/generate_r_preprocess_split.dir/__/__/bindings/R/print_R.cpp.o -o src/mlpack/bindings/R/build/bin/generate_r_preprocess_split -Wl,-rpath,/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib lib/libmlpack.so.3.4 /usr/lib64/libarmadillo.so /usr/lib/gcc/x86_64-pc-linux-gnu/11.2.0/libgomp.so /usr/lib64/libpthread.so && cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/methods/preprocess && /usr/bin/cmake -DGENERATE_BINDING_PROGRAM=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/build/bin/generate_r_preprocess_split -DBINDING_OUTPUT_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/mlpack/R/preprocess_split.R -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/GenerateBinding.cmake
[523/628] : && /usr/bin/x86_64-pc-linux-gnu-g++ -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 src/mlpack/methods/preprocess/CMakeFiles/mlpack_preprocess_describe.dir/preprocess_describe_main.cpp.o -o bin/mlpack_preprocess_describe -Wl,-rpath,/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib: lib/libmlpack.so.3.4 /usr/lib64/libarmadillo.so -lpthread /usr/lib/gcc/x86_64-pc-linux-gnu/11.2.0/libgomp.so /usr/lib64/libpthread.so && :
[524/628] cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/methods/preprocess && /usr/bin/cmake -DMODEL_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/mlpack/model.txt -DPROGRAM_NAME=preprocess_scale -DPROGRAM_MAIN_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/methods/preprocess/preprocess_scale_main.cpp -DSOURCE_DIR=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1 -DR_CPP_IN=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/R/r_method.cpp.in -DR_CPP_OUT=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/mlpack/src/preprocess_scale.cpp -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/R/ConfigureRCPP.cmake
[525/628] cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/methods/preprocess && /usr/bin/cmake -DGENERATE_CPP_IN=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/python/generate_pyx.cpp.in -DGENERATE_CPP_OUT=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/generate_pyx_preprocess_one_hot_encoding.cpp -DPROGRAM_MAIN_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/methods/preprocess/preprocess_one_hot_encoding_main.cpp -DPROGRAM_NAME=preprocess_one_hot_encoding -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/ConfigureFile.cmake
[526/628] cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/methods/preprocess && /usr/bin/cmake -DNAME=preprocess_scale -DGENERATE_CPP_IN=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/R/generate_R.cpp.in -DGENERATE_CPP_OUT=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/build/generate_r_preprocess_scale.cpp -DPROGRAM_MAIN_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/methods/preprocess/preprocess_scale_main.cpp -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/ConfigureFile.cmake
[527/628] /usr/bin/x86_64-pc-linux-gnu-g++ -DARMA_NO_DEBUG -DHAS_OPENMP -DHAS_STB -DNDEBUG -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include/stb -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -DBINDING_TYPE=BINDING_TYPE_R -std=gnu++11 -MD -MT src/mlpack/methods/preprocess/CMakeFiles/generate_r_preprocess_describe.dir/__/__/bindings/R/print_R.cpp.o -MF src/mlpack/methods/preprocess/CMakeFiles/generate_r_preprocess_describe.dir/__/__/bindings/R/print_R.cpp.o.d -o src/mlpack/methods/preprocess/CMakeFiles/generate_r_preprocess_describe.dir/__/__/bindings/R/print_R.cpp.o -c /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/R/print_R.cpp
[528/628] : && /usr/bin/x86_64-pc-linux-gnu-g++ -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 src/mlpack/methods/preprocess/CMakeFiles/generate_r_preprocess_describe.dir/__/__/bindings/R/build/generate_r_preprocess_describe.cpp.o src/mlpack/methods/preprocess/CMakeFiles/generate_r_preprocess_describe.dir/__/__/bindings/R/print_R.cpp.o -o src/mlpack/bindings/R/build/bin/generate_r_preprocess_describe -Wl,-rpath,/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib lib/libmlpack.so.3.4 /usr/lib64/libarmadillo.so /usr/lib/gcc/x86_64-pc-linux-gnu/11.2.0/libgomp.so /usr/lib64/libpthread.so && cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/methods/preprocess && /usr/bin/cmake -DGENERATE_BINDING_PROGRAM=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/build/bin/generate_r_preprocess_describe -DBINDING_OUTPUT_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/mlpack/R/preprocess_describe.R -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/GenerateBinding.cmake
[529/628] /usr/bin/x86_64-pc-linux-gnu-g++ -DARMA_NO_DEBUG -DHAS_OPENMP -DHAS_STB -DNDEBUG -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include/stb -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -DBINDING_TYPE=BINDING_TYPE_PYX -std=gnu++11 -MD -MT src/mlpack/methods/preprocess/CMakeFiles/generate_pyx_preprocess_split.dir/__/__/bindings/python/print_pyx.cpp.o -MF src/mlpack/methods/preprocess/CMakeFiles/generate_pyx_preprocess_split.dir/__/__/bindings/python/print_pyx.cpp.o.d -o src/mlpack/methods/preprocess/CMakeFiles/generate_pyx_preprocess_split.dir/__/__/bindings/python/print_pyx.cpp.o -c /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/python/print_pyx.cpp
[530/628] /usr/bin/x86_64-pc-linux-gnu-g++ -DARMA_NO_DEBUG -DHAS_OPENMP -DHAS_STB -DNDEBUG -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include/stb -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -DBINDING_TYPE=BINDING_TYPE_PYX -std=gnu++11 -MD -MT src/mlpack/methods/preprocess/CMakeFiles/generate_pyx_preprocess_describe.dir/__/__/bindings/python/print_pyx.cpp.o -MF src/mlpack/methods/preprocess/CMakeFiles/generate_pyx_preprocess_describe.dir/__/__/bindings/python/print_pyx.cpp.o.d -o src/mlpack/methods/preprocess/CMakeFiles/generate_pyx_preprocess_describe.dir/__/__/bindings/python/print_pyx.cpp.o -c /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/python/print_pyx.cpp
[531/628] /usr/bin/x86_64-pc-linux-gnu-g++ -DARMA_NO_DEBUG -DHAS_OPENMP -DHAS_STB -DNDEBUG -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include/stb -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -DBINDING_TYPE=BINDING_TYPE_PYX -std=gnu++11 -MD -MT src/mlpack/methods/preprocess/CMakeFiles/generate_pyx_preprocess_describe.dir/__/__/bindings/python/generate_pyx_preprocess_describe.cpp.o -MF src/mlpack/methods/preprocess/CMakeFiles/generate_pyx_preprocess_describe.dir/__/__/bindings/python/generate_pyx_preprocess_describe.cpp.o.d -o src/mlpack/methods/preprocess/CMakeFiles/generate_pyx_preprocess_describe.dir/__/__/bindings/python/generate_pyx_preprocess_describe.cpp.o -c /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/generate_pyx_preprocess_describe.cpp
[532/628] /usr/bin/x86_64-pc-linux-gnu-g++ -DARMA_NO_DEBUG -DHAS_OPENMP -DHAS_STB -DNDEBUG -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include/stb -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -DBINDING_TYPE=BINDING_TYPE_PYX -std=gnu++11 -MD -MT src/mlpack/methods/preprocess/CMakeFiles/generate_pyx_preprocess_split.dir/__/__/bindings/python/generate_pyx_preprocess_split.cpp.o -MF src/mlpack/methods/preprocess/CMakeFiles/generate_pyx_preprocess_split.dir/__/__/bindings/python/generate_pyx_preprocess_split.cpp.o.d -o src/mlpack/methods/preprocess/CMakeFiles/generate_pyx_preprocess_split.dir/__/__/bindings/python/generate_pyx_preprocess_split.cpp.o -c /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/generate_pyx_preprocess_split.cpp
[533/628] cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/methods/preprocess && /usr/bin/cmake -DGENERATE_CPP_IN=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/python/generate_pyx.cpp.in -DGENERATE_CPP_OUT=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/generate_pyx_image_converter.cpp -DPROGRAM_MAIN_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/methods/preprocess/image_converter_main.cpp -DPROGRAM_NAME=image_converter -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/ConfigureFile.cmake
[534/628] : && /usr/bin/x86_64-pc-linux-gnu-g++ -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 src/mlpack/methods/preprocess/CMakeFiles/generate_pyx_preprocess_describe.dir/__/__/bindings/python/generate_pyx_preprocess_describe.cpp.o src/mlpack/methods/preprocess/CMakeFiles/generate_pyx_preprocess_describe.dir/__/__/bindings/python/print_pyx.cpp.o -o bin/generate_pyx_preprocess_describe -Wl,-rpath,/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib lib/libmlpack.so.3.4 /usr/lib64/libarmadillo.so /usr/lib/gcc/x86_64-pc-linux-gnu/11.2.0/libgomp.so /usr/lib64/libpthread.so && cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/methods/preprocess && /usr/bin/cmake -DPROGRAM=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/bin/generate_pyx_preprocess_describe -DOUTPUT_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/mlpack/preprocess_describe.pyx -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/RunProgram.cmake
[535/628] : && /usr/bin/x86_64-pc-linux-gnu-g++ -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 src/mlpack/methods/preprocess/CMakeFiles/generate_pyx_preprocess_split.dir/__/__/bindings/python/generate_pyx_preprocess_split.cpp.o src/mlpack/methods/preprocess/CMakeFiles/generate_pyx_preprocess_split.dir/__/__/bindings/python/print_pyx.cpp.o -o bin/generate_pyx_preprocess_split -Wl,-rpath,/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib lib/libmlpack.so.3.4 /usr/lib64/libarmadillo.so /usr/lib/gcc/x86_64-pc-linux-gnu/11.2.0/libgomp.so /usr/lib64/libpthread.so && cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/methods/preprocess && /usr/bin/cmake -DPROGRAM=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/bin/generate_pyx_preprocess_split -DOUTPUT_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/mlpack/preprocess_split.pyx -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/RunProgram.cmake
[536/628] cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python && /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/temp/python3.9/bin/python /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/setup.py build_ext --module=preprocess_binarize.pyx
running build_ext
cythoning mlpack/preprocess_binarize.pyx to mlpack/preprocess_binarize.cpp
/usr/lib/python3.9/site-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/mlpack/preprocess_binarize.pyx
tree = Parsing.p_module(s, pxd, full_module_name)
building 'mlpack.preprocess_binarize' extension
x86_64-pc-linux-gnu-g++ -pthread -Os -pipe -march=native -frecord-gcc-switches -fPIC -I/usr/lib/python3.9/site-packages/numpy/core/include -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/ -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include -I/usr/include -I/usr/include -I/usr/include/stb -I/usr/include -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -I/usr/include/python3.9 -c mlpack/preprocess_binarize.cpp -o build/temp.linux-x86_64-3.9/mlpack/preprocess_binarize.o -DBINDING_TYPE=BINDING_TYPE_PYX -std=c++11 -fopenmp -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp
In file included from /usr/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h:1969,
from /usr/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h:12,
from /usr/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h:4,
from mlpack/preprocess_binarize.cpp:635:
/usr/lib/python3.9/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
17 | #warning "Using deprecated NumPy API, disable it with " \
| ^~~~~~~
x86_64-pc-linux-gnu-g++ -pthread -shared -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 -Os -pipe -march=native -frecord-gcc-switches build/temp.linux-x86_64-3.9/mlpack/preprocess_binarize.o -L/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib -L/usr/lib64 -o build/lib.linux-x86_64-3.9/mlpack/preprocess_binarize.cpython-39-x86_64-linux-gnu.so -fopenmp /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib/libmlpack.so /usr/lib64/libarmadillo.so
[537/628] /usr/bin/x86_64-pc-linux-gnu-g++ -DARMA_NO_DEBUG -DHAS_OPENMP -DHAS_STB -DNDEBUG -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include/stb -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -DBINDING_TYPE=BINDING_TYPE_PYX -std=gnu++11 -MD -MT src/mlpack/methods/preprocess/CMakeFiles/generate_pyx_preprocess_scale.dir/__/__/bindings/python/print_pyx.cpp.o -MF src/mlpack/methods/preprocess/CMakeFiles/generate_pyx_preprocess_scale.dir/__/__/bindings/python/print_pyx.cpp.o.d -o src/mlpack/methods/preprocess/CMakeFiles/generate_pyx_preprocess_scale.dir/__/__/bindings/python/print_pyx.cpp.o -c /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/python/print_pyx.cpp
[538/628] cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/methods/preprocess && /usr/bin/cmake -DMODEL_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/mlpack/model.txt -DPROGRAM_NAME=preprocess_one_hot_encoding -DPROGRAM_MAIN_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/methods/preprocess/preprocess_one_hot_encoding_main.cpp -DSOURCE_DIR=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1 -DR_CPP_IN=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/R/r_method.cpp.in -DR_CPP_OUT=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/mlpack/src/preprocess_one_hot_encoding.cpp -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/R/ConfigureRCPP.cmake
[539/628] cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/methods/preprocess && /usr/bin/cmake -DNAME=preprocess_one_hot_encoding -DGENERATE_CPP_IN=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/R/generate_R.cpp.in -DGENERATE_CPP_OUT=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/build/generate_r_preprocess_one_hot_encoding.cpp -DPROGRAM_MAIN_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/methods/preprocess/preprocess_one_hot_encoding_main.cpp -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/ConfigureFile.cmake
[540/628] /usr/bin/x86_64-pc-linux-gnu-g++ -DARMA_NO_DEBUG -DHAS_OPENMP -DHAS_STB -DNDEBUG -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include/stb -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -DBINDING_TYPE=BINDING_TYPE_PYX -std=gnu++11 -MD -MT src/mlpack/methods/preprocess/CMakeFiles/generate_pyx_preprocess_scale.dir/__/__/bindings/python/generate_pyx_preprocess_scale.cpp.o -MF src/mlpack/methods/preprocess/CMakeFiles/generate_pyx_preprocess_scale.dir/__/__/bindings/python/generate_pyx_preprocess_scale.cpp.o.d -o src/mlpack/methods/preprocess/CMakeFiles/generate_pyx_preprocess_scale.dir/__/__/bindings/python/generate_pyx_preprocess_scale.cpp.o -c /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/generate_pyx_preprocess_scale.cpp
[541/628] /usr/bin/x86_64-pc-linux-gnu-g++ -DARMA_NO_DEBUG -DHAS_OPENMP -DHAS_STB -DNDEBUG -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include/stb -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -DBINDING_TYPE=BINDING_TYPE_PYX -std=gnu++11 -MD -MT src/mlpack/methods/preprocess/CMakeFiles/generate_pyx_preprocess_one_hot_encoding.dir/__/__/bindings/python/generate_pyx_preprocess_one_hot_encoding.cpp.o -MF src/mlpack/methods/preprocess/CMakeFiles/generate_pyx_preprocess_one_hot_encoding.dir/__/__/bindings/python/generate_pyx_preprocess_one_hot_encoding.cpp.o.d -o src/mlpack/methods/preprocess/CMakeFiles/generate_pyx_preprocess_one_hot_encoding.dir/__/__/bindings/python/generate_pyx_preprocess_one_hot_encoding.cpp.o -c /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/generate_pyx_preprocess_one_hot_encoding.cpp
[542/628] /usr/bin/x86_64-pc-linux-gnu-g++ -DARMA_NO_DEBUG -DHAS_OPENMP -DHAS_STB -DNDEBUG -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include/stb -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -DBINDING_TYPE=BINDING_TYPE_R -std=gnu++11 -MD -MT src/mlpack/methods/preprocess/CMakeFiles/generate_r_preprocess_scale.dir/__/__/bindings/R/print_R.cpp.o -MF src/mlpack/methods/preprocess/CMakeFiles/generate_r_preprocess_scale.dir/__/__/bindings/R/print_R.cpp.o.d -o src/mlpack/methods/preprocess/CMakeFiles/generate_r_preprocess_scale.dir/__/__/bindings/R/print_R.cpp.o -c /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/R/print_R.cpp
[543/628] /usr/bin/x86_64-pc-linux-gnu-g++ -DARMA_NO_DEBUG -DHAS_OPENMP -DHAS_STB -DNDEBUG -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include/stb -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -DBINDING_TYPE=BINDING_TYPE_R -std=gnu++11 -MD -MT src/mlpack/methods/preprocess/CMakeFiles/generate_r_preprocess_scale.dir/__/__/bindings/R/build/generate_r_preprocess_scale.cpp.o -MF src/mlpack/methods/preprocess/CMakeFiles/generate_r_preprocess_scale.dir/__/__/bindings/R/build/generate_r_preprocess_scale.cpp.o.d -o src/mlpack/methods/preprocess/CMakeFiles/generate_r_preprocess_scale.dir/__/__/bindings/R/build/generate_r_preprocess_scale.cpp.o -c /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/build/generate_r_preprocess_scale.cpp
[544/628] /usr/bin/x86_64-pc-linux-gnu-g++ -DARMA_NO_DEBUG -DHAS_OPENMP -DHAS_STB -DNDEBUG -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include/stb -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -DBINDING_TYPE=BINDING_TYPE_PYX -std=gnu++11 -MD -MT src/mlpack/methods/preprocess/CMakeFiles/generate_pyx_preprocess_one_hot_encoding.dir/__/__/bindings/python/print_pyx.cpp.o -MF src/mlpack/methods/preprocess/CMakeFiles/generate_pyx_preprocess_one_hot_encoding.dir/__/__/bindings/python/print_pyx.cpp.o.d -o src/mlpack/methods/preprocess/CMakeFiles/generate_pyx_preprocess_one_hot_encoding.dir/__/__/bindings/python/print_pyx.cpp.o -c /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/python/print_pyx.cpp
[545/628] cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/methods/preprocess && /usr/bin/cmake -DMODEL_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/mlpack/model.txt -DPROGRAM_NAME=image_converter -DPROGRAM_MAIN_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/methods/preprocess/image_converter_main.cpp -DSOURCE_DIR=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1 -DR_CPP_IN=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/R/r_method.cpp.in -DR_CPP_OUT=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/mlpack/src/image_converter.cpp -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/R/ConfigureRCPP.cmake
[546/628] cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/methods/preprocess && /usr/bin/cmake -DNAME=image_converter -DGENERATE_CPP_IN=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/R/generate_R.cpp.in -DGENERATE_CPP_OUT=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/build/generate_r_image_converter.cpp -DPROGRAM_MAIN_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/methods/preprocess/image_converter_main.cpp -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/ConfigureFile.cmake
[547/628] : && /usr/bin/x86_64-pc-linux-gnu-g++ -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 src/mlpack/methods/preprocess/CMakeFiles/generate_pyx_preprocess_one_hot_encoding.dir/__/__/bindings/python/generate_pyx_preprocess_one_hot_encoding.cpp.o src/mlpack/methods/preprocess/CMakeFiles/generate_pyx_preprocess_one_hot_encoding.dir/__/__/bindings/python/print_pyx.cpp.o -o bin/generate_pyx_preprocess_one_hot_encoding -Wl,-rpath,/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib lib/libmlpack.so.3.4 /usr/lib64/libarmadillo.so /usr/lib/gcc/x86_64-pc-linux-gnu/11.2.0/libgomp.so /usr/lib64/libpthread.so && cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/methods/preprocess && /usr/bin/cmake -DPROGRAM=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/bin/generate_pyx_preprocess_one_hot_encoding -DOUTPUT_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/mlpack/preprocess_one_hot_encoding.pyx -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/RunProgram.cmake
[548/628] : && /usr/bin/x86_64-pc-linux-gnu-g++ -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 src/mlpack/methods/preprocess/CMakeFiles/generate_r_preprocess_scale.dir/__/__/bindings/R/build/generate_r_preprocess_scale.cpp.o src/mlpack/methods/preprocess/CMakeFiles/generate_r_preprocess_scale.dir/__/__/bindings/R/print_R.cpp.o -o src/mlpack/bindings/R/build/bin/generate_r_preprocess_scale -Wl,-rpath,/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib lib/libmlpack.so.3.4 /usr/lib64/libarmadillo.so /usr/lib/gcc/x86_64-pc-linux-gnu/11.2.0/libgomp.so /usr/lib64/libpthread.so && cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/methods/preprocess && /usr/bin/cmake -DGENERATE_BINDING_PROGRAM=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/build/bin/generate_r_preprocess_scale -DBINDING_OUTPUT_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/mlpack/R/preprocess_scale.R -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/GenerateBinding.cmake
[549/628] : && /usr/bin/x86_64-pc-linux-gnu-g++ -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 src/mlpack/methods/preprocess/CMakeFiles/generate_pyx_preprocess_scale.dir/__/__/bindings/python/generate_pyx_preprocess_scale.cpp.o src/mlpack/methods/preprocess/CMakeFiles/generate_pyx_preprocess_scale.dir/__/__/bindings/python/print_pyx.cpp.o -o bin/generate_pyx_preprocess_scale -Wl,-rpath,/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib lib/libmlpack.so.3.4 /usr/lib64/libarmadillo.so /usr/lib/gcc/x86_64-pc-linux-gnu/11.2.0/libgomp.so /usr/lib64/libpthread.so && cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/methods/preprocess && /usr/bin/cmake -DPROGRAM=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/bin/generate_pyx_preprocess_scale -DOUTPUT_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/mlpack/preprocess_scale.pyx -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/RunProgram.cmake
[550/628] /usr/bin/x86_64-pc-linux-gnu-g++ -DARMA_NO_DEBUG -DHAS_OPENMP -DHAS_STB -DNDEBUG -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include/stb -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -DBINDING_TYPE=BINDING_TYPE_PYX -std=gnu++11 -MD -MT src/mlpack/methods/preprocess/CMakeFiles/generate_pyx_image_converter.dir/__/__/bindings/python/print_pyx.cpp.o -MF src/mlpack/methods/preprocess/CMakeFiles/generate_pyx_image_converter.dir/__/__/bindings/python/print_pyx.cpp.o.d -o src/mlpack/methods/preprocess/CMakeFiles/generate_pyx_image_converter.dir/__/__/bindings/python/print_pyx.cpp.o -c /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/python/print_pyx.cpp
[551/628] cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python && /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/temp/python3.9/bin/python /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/setup.py build_ext --module=kfn.pyx
running build_ext
cythoning mlpack/kfn.pyx to mlpack/kfn.cpp
/usr/lib/python3.9/site-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/mlpack/kfn.pyx
tree = Parsing.p_module(s, pxd, full_module_name)
building 'mlpack.kfn' extension
x86_64-pc-linux-gnu-g++ -pthread -Os -pipe -march=native -frecord-gcc-switches -fPIC -I/usr/lib/python3.9/site-packages/numpy/core/include -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/ -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include -I/usr/include -I/usr/include -I/usr/include/stb -I/usr/include -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -I/usr/include/python3.9 -c mlpack/kfn.cpp -o build/temp.linux-x86_64-3.9/mlpack/kfn.o -DBINDING_TYPE=BINDING_TYPE_PYX -std=c++11 -fopenmp -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp
In file included from /usr/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h:1969,
from /usr/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h:12,
from /usr/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h:4,
from mlpack/kfn.cpp:635:
/usr/lib/python3.9/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
17 | #warning "Using deprecated NumPy API, disable it with " \
| ^~~~~~~
x86_64-pc-linux-gnu-g++ -pthread -shared -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 -Os -pipe -march=native -frecord-gcc-switches build/temp.linux-x86_64-3.9/mlpack/kfn.o -L/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib -L/usr/lib64 -o build/lib.linux-x86_64-3.9/mlpack/kfn.cpython-39-x86_64-linux-gnu.so -fopenmp /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib/libmlpack.so /usr/lib64/libarmadillo.so
[552/628] cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/methods/radical && /usr/bin/cmake -DMODEL_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/mlpack/model.txt -DPROGRAM_NAME=radical -DPROGRAM_MAIN_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/methods/radical/radical_main.cpp -DSOURCE_DIR=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1 -DR_CPP_IN=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/R/r_method.cpp.in -DR_CPP_OUT=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/mlpack/src/radical.cpp -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/R/ConfigureRCPP.cmake
[553/628] /usr/bin/x86_64-pc-linux-gnu-g++ -DARMA_NO_DEBUG -DHAS_OPENMP -DHAS_STB -DNDEBUG -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include/stb -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -DBINDING_TYPE=BINDING_TYPE_PYX -std=gnu++11 -MD -MT src/mlpack/methods/preprocess/CMakeFiles/generate_pyx_image_converter.dir/__/__/bindings/python/generate_pyx_image_converter.cpp.o -MF src/mlpack/methods/preprocess/CMakeFiles/generate_pyx_image_converter.dir/__/__/bindings/python/generate_pyx_image_converter.cpp.o.d -o src/mlpack/methods/preprocess/CMakeFiles/generate_pyx_image_converter.dir/__/__/bindings/python/generate_pyx_image_converter.cpp.o -c /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/generate_pyx_image_converter.cpp
[554/628] cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/methods/radical && /usr/bin/cmake -DNAME=radical -DGENERATE_CPP_IN=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/R/generate_R.cpp.in -DGENERATE_CPP_OUT=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/build/generate_r_radical.cpp -DPROGRAM_MAIN_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/methods/radical/radical_main.cpp -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/ConfigureFile.cmake
[555/628] : && /usr/bin/x86_64-pc-linux-gnu-g++ -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 src/mlpack/methods/preprocess/CMakeFiles/generate_pyx_image_converter.dir/__/__/bindings/python/generate_pyx_image_converter.cpp.o src/mlpack/methods/preprocess/CMakeFiles/generate_pyx_image_converter.dir/__/__/bindings/python/print_pyx.cpp.o -o bin/generate_pyx_image_converter -Wl,-rpath,/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib lib/libmlpack.so.3.4 /usr/lib64/libarmadillo.so /usr/lib/gcc/x86_64-pc-linux-gnu/11.2.0/libgomp.so /usr/lib64/libpthread.so && cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/methods/preprocess && /usr/bin/cmake -DPROGRAM=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/bin/generate_pyx_image_converter -DOUTPUT_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/mlpack/image_converter.pyx -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/RunProgram.cmake
[556/628] /usr/bin/x86_64-pc-linux-gnu-g++ -DARMA_NO_DEBUG -DHAS_OPENMP -DHAS_STB -DNDEBUG -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include/stb -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -DBINDING_TYPE=BINDING_TYPE_R -std=gnu++11 -MD -MT src/mlpack/methods/preprocess/CMakeFiles/generate_r_preprocess_one_hot_encoding.dir/__/__/bindings/R/build/generate_r_preprocess_one_hot_encoding.cpp.o -MF src/mlpack/methods/preprocess/CMakeFiles/generate_r_preprocess_one_hot_encoding.dir/__/__/bindings/R/build/generate_r_preprocess_one_hot_encoding.cpp.o.d -o src/mlpack/methods/preprocess/CMakeFiles/generate_r_preprocess_one_hot_encoding.dir/__/__/bindings/R/build/generate_r_preprocess_one_hot_encoding.cpp.o -c /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/build/generate_r_preprocess_one_hot_encoding.cpp
[557/628] cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python && /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/temp/python3.9/bin/python /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/setup.py build_ext --module=knn.pyx
running build_ext
cythoning mlpack/knn.pyx to mlpack/knn.cpp
/usr/lib/python3.9/site-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/mlpack/knn.pyx
tree = Parsing.p_module(s, pxd, full_module_name)
building 'mlpack.knn' extension
x86_64-pc-linux-gnu-g++ -pthread -Os -pipe -march=native -frecord-gcc-switches -fPIC -I/usr/lib/python3.9/site-packages/numpy/core/include -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/ -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include -I/usr/include -I/usr/include -I/usr/include/stb -I/usr/include -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -I/usr/include/python3.9 -c mlpack/knn.cpp -o build/temp.linux-x86_64-3.9/mlpack/knn.o -DBINDING_TYPE=BINDING_TYPE_PYX -std=c++11 -fopenmp -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp
In file included from /usr/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h:1969,
from /usr/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h:12,
from /usr/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h:4,
from mlpack/knn.cpp:635:
/usr/lib/python3.9/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
17 | #warning "Using deprecated NumPy API, disable it with " \
| ^~~~~~~
x86_64-pc-linux-gnu-g++ -pthread -shared -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 -Os -pipe -march=native -frecord-gcc-switches build/temp.linux-x86_64-3.9/mlpack/knn.o -L/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib -L/usr/lib64 -o build/lib.linux-x86_64-3.9/mlpack/knn.cpython-39-x86_64-linux-gnu.so -fopenmp /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib/libmlpack.so /usr/lib64/libarmadillo.so
[558/628] cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/methods/radical && /usr/bin/cmake -DGENERATE_CPP_IN=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/python/generate_pyx.cpp.in -DGENERATE_CPP_OUT=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/generate_pyx_radical.cpp -DPROGRAM_MAIN_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/methods/radical/radical_main.cpp -DPROGRAM_NAME=radical -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/ConfigureFile.cmake
[559/628] cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python && /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/temp/python3.9/bin/python /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/setup.py build_ext --module=preprocess_describe.pyx
running build_ext
cythoning mlpack/preprocess_describe.pyx to mlpack/preprocess_describe.cpp
/usr/lib/python3.9/site-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/mlpack/preprocess_describe.pyx
tree = Parsing.p_module(s, pxd, full_module_name)
building 'mlpack.preprocess_describe' extension
x86_64-pc-linux-gnu-g++ -pthread -Os -pipe -march=native -frecord-gcc-switches -fPIC -I/usr/lib/python3.9/site-packages/numpy/core/include -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/ -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include -I/usr/include -I/usr/include -I/usr/include/stb -I/usr/include -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -I/usr/include/python3.9 -c mlpack/preprocess_describe.cpp -o build/temp.linux-x86_64-3.9/mlpack/preprocess_describe.o -DBINDING_TYPE=BINDING_TYPE_PYX -std=c++11 -fopenmp -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp
In file included from /usr/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h:1969,
from /usr/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h:12,
from /usr/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h:4,
from mlpack/preprocess_describe.cpp:635:
/usr/lib/python3.9/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
17 | #warning "Using deprecated NumPy API, disable it with " \
| ^~~~~~~
x86_64-pc-linux-gnu-g++ -pthread -shared -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 -Os -pipe -march=native -frecord-gcc-switches build/temp.linux-x86_64-3.9/mlpack/preprocess_describe.o -L/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib -L/usr/lib64 -o build/lib.linux-x86_64-3.9/mlpack/preprocess_describe.cpython-39-x86_64-linux-gnu.so -fopenmp /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib/libmlpack.so /usr/lib64/libarmadillo.so
[560/628] cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python && /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/temp/python3.9/bin/python /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/setup.py build_ext --module=preprocess_split.pyx
running build_ext
cythoning mlpack/preprocess_split.pyx to mlpack/preprocess_split.cpp
/usr/lib/python3.9/site-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/mlpack/preprocess_split.pyx
tree = Parsing.p_module(s, pxd, full_module_name)
building 'mlpack.preprocess_split' extension
x86_64-pc-linux-gnu-g++ -pthread -Os -pipe -march=native -frecord-gcc-switches -fPIC -I/usr/lib/python3.9/site-packages/numpy/core/include -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/ -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include -I/usr/include -I/usr/include -I/usr/include/stb -I/usr/include -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -I/usr/include/python3.9 -c mlpack/preprocess_split.cpp -o build/temp.linux-x86_64-3.9/mlpack/preprocess_split.o -DBINDING_TYPE=BINDING_TYPE_PYX -std=c++11 -fopenmp -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp
In file included from /usr/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h:1969,
from /usr/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h:12,
from /usr/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h:4,
from mlpack/preprocess_split.cpp:635:
/usr/lib/python3.9/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
17 | #warning "Using deprecated NumPy API, disable it with " \
| ^~~~~~~
x86_64-pc-linux-gnu-g++ -pthread -shared -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 -Os -pipe -march=native -frecord-gcc-switches build/temp.linux-x86_64-3.9/mlpack/preprocess_split.o -L/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib -L/usr/lib64 -o build/lib.linux-x86_64-3.9/mlpack/preprocess_split.cpython-39-x86_64-linux-gnu.so -fopenmp /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib/libmlpack.so /usr/lib64/libarmadillo.so
[561/628] /usr/bin/x86_64-pc-linux-gnu-g++ -DARMA_NO_DEBUG -DHAS_OPENMP -DHAS_STB -DNDEBUG -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include/stb -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -DBINDING_TYPE=BINDING_TYPE_R -std=gnu++11 -MD -MT src/mlpack/methods/preprocess/CMakeFiles/generate_r_preprocess_one_hot_encoding.dir/__/__/bindings/R/print_R.cpp.o -MF src/mlpack/methods/preprocess/CMakeFiles/generate_r_preprocess_one_hot_encoding.dir/__/__/bindings/R/print_R.cpp.o.d -o src/mlpack/methods/preprocess/CMakeFiles/generate_r_preprocess_one_hot_encoding.dir/__/__/bindings/R/print_R.cpp.o -c /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/R/print_R.cpp
[562/628] /usr/bin/x86_64-pc-linux-gnu-g++ -DARMA_NO_DEBUG -DHAS_OPENMP -DHAS_STB -DNDEBUG -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include/stb -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -DBINDING_TYPE=BINDING_TYPE_R -std=gnu++11 -MD -MT src/mlpack/methods/preprocess/CMakeFiles/generate_r_image_converter.dir/__/__/bindings/R/print_R.cpp.o -MF src/mlpack/methods/preprocess/CMakeFiles/generate_r_image_converter.dir/__/__/bindings/R/print_R.cpp.o.d -o src/mlpack/methods/preprocess/CMakeFiles/generate_r_image_converter.dir/__/__/bindings/R/print_R.cpp.o -c /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/R/print_R.cpp
[563/628] cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/methods/random_forest && /usr/bin/cmake -DMODEL_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/mlpack/model.txt -DPROGRAM_NAME=random_forest -DPROGRAM_MAIN_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/methods/random_forest/random_forest_main.cpp -DSOURCE_DIR=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1 -DR_CPP_IN=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/R/r_method.cpp.in -DR_CPP_OUT=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/mlpack/src/random_forest.cpp -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/R/ConfigureRCPP.cmake
[564/628] : && /usr/bin/x86_64-pc-linux-gnu-g++ -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 src/mlpack/methods/preprocess/CMakeFiles/generate_r_preprocess_one_hot_encoding.dir/__/__/bindings/R/build/generate_r_preprocess_one_hot_encoding.cpp.o src/mlpack/methods/preprocess/CMakeFiles/generate_r_preprocess_one_hot_encoding.dir/__/__/bindings/R/print_R.cpp.o -o src/mlpack/bindings/R/build/bin/generate_r_preprocess_one_hot_encoding -Wl,-rpath,/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib lib/libmlpack.so.3.4 /usr/lib64/libarmadillo.so /usr/lib/gcc/x86_64-pc-linux-gnu/11.2.0/libgomp.so /usr/lib64/libpthread.so && cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/methods/preprocess && /usr/bin/cmake -DGENERATE_BINDING_PROGRAM=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/build/bin/generate_r_preprocess_one_hot_encoding -DBINDING_OUTPUT_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/mlpack/R/preprocess_one_hot_encoding.R -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/GenerateBinding.cmake
[565/628] cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/methods/random_forest && /usr/bin/cmake -DNAME=random_forest -DGENERATE_CPP_IN=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/R/generate_R.cpp.in -DGENERATE_CPP_OUT=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/build/generate_r_random_forest.cpp -DPROGRAM_MAIN_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/methods/random_forest/random_forest_main.cpp -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/ConfigureFile.cmake
[566/628] cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/methods/random_forest && /usr/bin/cmake -DGENERATE_CPP_IN=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/python/generate_pyx.cpp.in -DGENERATE_CPP_OUT=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/generate_pyx_random_forest.cpp -DPROGRAM_MAIN_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/methods/random_forest/random_forest_main.cpp -DPROGRAM_NAME=random_forest -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/ConfigureFile.cmake
[567/628] /usr/bin/x86_64-pc-linux-gnu-g++ -DARMA_NO_DEBUG -DHAS_OPENMP -DHAS_STB -DNDEBUG -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include/stb -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -DBINDING_TYPE=BINDING_TYPE_R -std=gnu++11 -MD -MT src/mlpack/methods/preprocess/CMakeFiles/generate_r_image_converter.dir/__/__/bindings/R/build/generate_r_image_converter.cpp.o -MF src/mlpack/methods/preprocess/CMakeFiles/generate_r_image_converter.dir/__/__/bindings/R/build/generate_r_image_converter.cpp.o.d -o src/mlpack/methods/preprocess/CMakeFiles/generate_r_image_converter.dir/__/__/bindings/R/build/generate_r_image_converter.cpp.o -c /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/build/generate_r_image_converter.cpp
[568/628] : && /usr/bin/x86_64-pc-linux-gnu-g++ -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 src/mlpack/methods/preprocess/CMakeFiles/generate_r_image_converter.dir/__/__/bindings/R/build/generate_r_image_converter.cpp.o src/mlpack/methods/preprocess/CMakeFiles/generate_r_image_converter.dir/__/__/bindings/R/print_R.cpp.o -o src/mlpack/bindings/R/build/bin/generate_r_image_converter -Wl,-rpath,/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib lib/libmlpack.so.3.4 /usr/lib64/libarmadillo.so /usr/lib/gcc/x86_64-pc-linux-gnu/11.2.0/libgomp.so /usr/lib64/libpthread.so && cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/methods/preprocess && /usr/bin/cmake -DGENERATE_BINDING_PROGRAM=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/build/bin/generate_r_image_converter -DBINDING_OUTPUT_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/mlpack/R/image_converter.R -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/GenerateBinding.cmake
[569/628] /usr/bin/x86_64-pc-linux-gnu-g++ -DARMA_NO_DEBUG -DHAS_OPENMP -DHAS_STB -DNDEBUG -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include/stb -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -DBINDING_TYPE=BINDING_TYPE_R -std=gnu++11 -MD -MT src/mlpack/methods/radical/CMakeFiles/generate_r_radical.dir/__/__/bindings/R/print_R.cpp.o -MF src/mlpack/methods/radical/CMakeFiles/generate_r_radical.dir/__/__/bindings/R/print_R.cpp.o.d -o src/mlpack/methods/radical/CMakeFiles/generate_r_radical.dir/__/__/bindings/R/print_R.cpp.o -c /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/R/print_R.cpp
[570/628] /usr/bin/x86_64-pc-linux-gnu-g++ -DARMA_NO_DEBUG -DHAS_OPENMP -DHAS_STB -DNDEBUG -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include/stb -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -DBINDING_TYPE=BINDING_TYPE_R -std=gnu++11 -MD -MT src/mlpack/methods/radical/CMakeFiles/generate_r_radical.dir/__/__/bindings/R/build/generate_r_radical.cpp.o -MF src/mlpack/methods/radical/CMakeFiles/generate_r_radical.dir/__/__/bindings/R/build/generate_r_radical.cpp.o.d -o src/mlpack/methods/radical/CMakeFiles/generate_r_radical.dir/__/__/bindings/R/build/generate_r_radical.cpp.o -c /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/build/generate_r_radical.cpp
[571/628] cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python && /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/temp/python3.9/bin/python /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/setup.py build_ext --module=preprocess_one_hot_encoding.pyx
running build_ext
cythoning mlpack/preprocess_one_hot_encoding.pyx to mlpack/preprocess_one_hot_encoding.cpp
/usr/lib/python3.9/site-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/mlpack/preprocess_one_hot_encoding.pyx
tree = Parsing.p_module(s, pxd, full_module_name)
building 'mlpack.preprocess_one_hot_encoding' extension
x86_64-pc-linux-gnu-g++ -pthread -Os -pipe -march=native -frecord-gcc-switches -fPIC -I/usr/lib/python3.9/site-packages/numpy/core/include -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/ -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include -I/usr/include -I/usr/include -I/usr/include/stb -I/usr/include -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -I/usr/include/python3.9 -c mlpack/preprocess_one_hot_encoding.cpp -o build/temp.linux-x86_64-3.9/mlpack/preprocess_one_hot_encoding.o -DBINDING_TYPE=BINDING_TYPE_PYX -std=c++11 -fopenmp -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp
In file included from /usr/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h:1969,
from /usr/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h:12,
from /usr/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h:4,
from mlpack/preprocess_one_hot_encoding.cpp:635:
/usr/lib/python3.9/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
17 | #warning "Using deprecated NumPy API, disable it with " \
| ^~~~~~~
x86_64-pc-linux-gnu-g++ -pthread -shared -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 -Os -pipe -march=native -frecord-gcc-switches build/temp.linux-x86_64-3.9/mlpack/preprocess_one_hot_encoding.o -L/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib -L/usr/lib64 -o build/lib.linux-x86_64-3.9/mlpack/preprocess_one_hot_encoding.cpython-39-x86_64-linux-gnu.so -fopenmp /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib/libmlpack.so /usr/lib64/libarmadillo.so
[572/628] /usr/bin/x86_64-pc-linux-gnu-g++ -DARMA_NO_DEBUG -DHAS_OPENMP -DHAS_STB -DNDEBUG -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include/stb -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -DBINDING_TYPE=BINDING_TYPE_PYX -std=gnu++11 -MD -MT src/mlpack/methods/radical/CMakeFiles/generate_pyx_radical.dir/__/__/bindings/python/generate_pyx_radical.cpp.o -MF src/mlpack/methods/radical/CMakeFiles/generate_pyx_radical.dir/__/__/bindings/python/generate_pyx_radical.cpp.o.d -o src/mlpack/methods/radical/CMakeFiles/generate_pyx_radical.dir/__/__/bindings/python/generate_pyx_radical.cpp.o -c /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/generate_pyx_radical.cpp
[573/628] cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python && /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/temp/python3.9/bin/python /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/setup.py build_ext --module=image_converter.pyx
running build_ext
cythoning mlpack/image_converter.pyx to mlpack/image_converter.cpp
/usr/lib/python3.9/site-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/mlpack/image_converter.pyx
tree = Parsing.p_module(s, pxd, full_module_name)
building 'mlpack.image_converter' extension
x86_64-pc-linux-gnu-g++ -pthread -Os -pipe -march=native -frecord-gcc-switches -fPIC -I/usr/lib/python3.9/site-packages/numpy/core/include -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/ -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include -I/usr/include -I/usr/include -I/usr/include/stb -I/usr/include -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -I/usr/include/python3.9 -c mlpack/image_converter.cpp -o build/temp.linux-x86_64-3.9/mlpack/image_converter.o -DBINDING_TYPE=BINDING_TYPE_PYX -std=c++11 -fopenmp -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp
In file included from /usr/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h:1969,
from /usr/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h:12,
from /usr/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h:4,
from mlpack/image_converter.cpp:635:
/usr/lib/python3.9/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
17 | #warning "Using deprecated NumPy API, disable it with " \
| ^~~~~~~
x86_64-pc-linux-gnu-g++ -pthread -shared -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 -Os -pipe -march=native -frecord-gcc-switches build/temp.linux-x86_64-3.9/mlpack/image_converter.o -L/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib -L/usr/lib64 -o build/lib.linux-x86_64-3.9/mlpack/image_converter.cpython-39-x86_64-linux-gnu.so -fopenmp /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib/libmlpack.so /usr/lib64/libarmadillo.so
[574/628] /usr/bin/x86_64-pc-linux-gnu-g++ -DARMA_NO_DEBUG -DHAS_OPENMP -DHAS_STB -DNDEBUG -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include/stb -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -DBINDING_TYPE=BINDING_TYPE_CLI -std=gnu++11 -MD -MT src/mlpack/methods/radical/CMakeFiles/mlpack_radical.dir/radical_main.cpp.o -MF src/mlpack/methods/radical/CMakeFiles/mlpack_radical.dir/radical_main.cpp.o.d -o src/mlpack/methods/radical/CMakeFiles/mlpack_radical.dir/radical_main.cpp.o -c /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/methods/radical/radical_main.cpp
[575/628] /usr/bin/x86_64-pc-linux-gnu-g++ -DARMA_NO_DEBUG -DHAS_OPENMP -DHAS_STB -DNDEBUG -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include/stb -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -DBINDING_TYPE=BINDING_TYPE_R -std=gnu++11 -MD -MT src/mlpack/methods/random_forest/CMakeFiles/generate_r_random_forest.dir/__/__/bindings/R/print_R.cpp.o -MF src/mlpack/methods/random_forest/CMakeFiles/generate_r_random_forest.dir/__/__/bindings/R/print_R.cpp.o.d -o src/mlpack/methods/random_forest/CMakeFiles/generate_r_random_forest.dir/__/__/bindings/R/print_R.cpp.o -c /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/R/print_R.cpp
[576/628] /usr/bin/x86_64-pc-linux-gnu-g++ -DARMA_NO_DEBUG -DHAS_OPENMP -DHAS_STB -DNDEBUG -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include/stb -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -DBINDING_TYPE=BINDING_TYPE_PYX -std=gnu++11 -MD -MT src/mlpack/methods/radical/CMakeFiles/generate_pyx_radical.dir/__/__/bindings/python/print_pyx.cpp.o -MF src/mlpack/methods/radical/CMakeFiles/generate_pyx_radical.dir/__/__/bindings/python/print_pyx.cpp.o.d -o src/mlpack/methods/radical/CMakeFiles/generate_pyx_radical.dir/__/__/bindings/python/print_pyx.cpp.o -c /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/python/print_pyx.cpp
[577/628] /usr/bin/x86_64-pc-linux-gnu-g++ -DARMA_NO_DEBUG -DHAS_OPENMP -DHAS_STB -DNDEBUG -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include/stb -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -DBINDING_TYPE=BINDING_TYPE_R -std=gnu++11 -MD -MT src/mlpack/methods/random_forest/CMakeFiles/generate_r_random_forest.dir/__/__/bindings/R/build/generate_r_random_forest.cpp.o -MF src/mlpack/methods/random_forest/CMakeFiles/generate_r_random_forest.dir/__/__/bindings/R/build/generate_r_random_forest.cpp.o.d -o src/mlpack/methods/random_forest/CMakeFiles/generate_r_random_forest.dir/__/__/bindings/R/build/generate_r_random_forest.cpp.o -c /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/build/generate_r_random_forest.cpp
[578/628] cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python && /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/temp/python3.9/bin/python /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/setup.py build_ext --module=preprocess_scale.pyx
running build_ext
cythoning mlpack/preprocess_scale.pyx to mlpack/preprocess_scale.cpp
/usr/lib/python3.9/site-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/mlpack/preprocess_scale.pyx
tree = Parsing.p_module(s, pxd, full_module_name)
building 'mlpack.preprocess_scale' extension
x86_64-pc-linux-gnu-g++ -pthread -Os -pipe -march=native -frecord-gcc-switches -fPIC -I/usr/lib/python3.9/site-packages/numpy/core/include -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/ -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include -I/usr/include -I/usr/include -I/usr/include/stb -I/usr/include -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -I/usr/include/python3.9 -c mlpack/preprocess_scale.cpp -o build/temp.linux-x86_64-3.9/mlpack/preprocess_scale.o -DBINDING_TYPE=BINDING_TYPE_PYX -std=c++11 -fopenmp -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp
In file included from /usr/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h:1969,
from /usr/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h:12,
from /usr/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h:4,
from mlpack/preprocess_scale.cpp:635:
/usr/lib/python3.9/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
17 | #warning "Using deprecated NumPy API, disable it with " \
| ^~~~~~~
x86_64-pc-linux-gnu-g++ -pthread -shared -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 -Os -pipe -march=native -frecord-gcc-switches build/temp.linux-x86_64-3.9/mlpack/preprocess_scale.o -L/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib -L/usr/lib64 -o build/lib.linux-x86_64-3.9/mlpack/preprocess_scale.cpython-39-x86_64-linux-gnu.so -fopenmp /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib/libmlpack.so /usr/lib64/libarmadillo.so
[579/628] /usr/bin/x86_64-pc-linux-gnu-g++ -DARMA_NO_DEBUG -DHAS_OPENMP -DHAS_STB -DNDEBUG -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include/stb -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -DBINDING_TYPE=BINDING_TYPE_PYX -std=gnu++11 -MD -MT src/mlpack/methods/random_forest/CMakeFiles/generate_pyx_random_forest.dir/__/__/bindings/python/generate_pyx_random_forest.cpp.o -MF src/mlpack/methods/random_forest/CMakeFiles/generate_pyx_random_forest.dir/__/__/bindings/python/generate_pyx_random_forest.cpp.o.d -o src/mlpack/methods/random_forest/CMakeFiles/generate_pyx_random_forest.dir/__/__/bindings/python/generate_pyx_random_forest.cpp.o -c /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/generate_pyx_random_forest.cpp
[580/628] cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/methods/rann && /usr/bin/cmake -DGENERATE_CPP_IN=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/python/generate_pyx.cpp.in -DGENERATE_CPP_OUT=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/generate_pyx_krann.cpp -DPROGRAM_MAIN_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/methods/rann/krann_main.cpp -DPROGRAM_NAME=krann -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/ConfigureFile.cmake
[581/628] cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/methods/rann && /usr/bin/cmake -DMODEL_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/mlpack/model.txt -DPROGRAM_NAME=krann -DPROGRAM_MAIN_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/methods/rann/krann_main.cpp -DSOURCE_DIR=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1 -DR_CPP_IN=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/R/r_method.cpp.in -DR_CPP_OUT=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/mlpack/src/krann.cpp -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/R/ConfigureRCPP.cmake
[582/628] cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/methods/softmax_regression && /usr/bin/cmake -DGENERATE_CPP_IN=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/python/generate_pyx.cpp.in -DGENERATE_CPP_OUT=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/generate_pyx_softmax_regression.cpp -DPROGRAM_MAIN_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/methods/softmax_regression/softmax_regression_main.cpp -DPROGRAM_NAME=softmax_regression -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/ConfigureFile.cmake
[583/628] cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/methods/softmax_regression && /usr/bin/cmake -DMODEL_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/mlpack/model.txt -DPROGRAM_NAME=softmax_regression -DPROGRAM_MAIN_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/methods/softmax_regression/softmax_regression_main.cpp -DSOURCE_DIR=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1 -DR_CPP_IN=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/R/r_method.cpp.in -DR_CPP_OUT=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/mlpack/src/softmax_regression.cpp -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/R/ConfigureRCPP.cmake
[584/628] cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/methods/rann && /usr/bin/cmake -DNAME=krann -DGENERATE_CPP_IN=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/R/generate_R.cpp.in -DGENERATE_CPP_OUT=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/build/generate_r_krann.cpp -DPROGRAM_MAIN_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/methods/rann/krann_main.cpp -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/ConfigureFile.cmake
[585/628] : && /usr/bin/x86_64-pc-linux-gnu-g++ -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 src/mlpack/methods/radical/CMakeFiles/generate_pyx_radical.dir/__/__/bindings/python/generate_pyx_radical.cpp.o src/mlpack/methods/radical/CMakeFiles/generate_pyx_radical.dir/__/__/bindings/python/print_pyx.cpp.o -o bin/generate_pyx_radical -Wl,-rpath,/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib lib/libmlpack.so.3.4 /usr/lib64/libarmadillo.so /usr/lib/gcc/x86_64-pc-linux-gnu/11.2.0/libgomp.so /usr/lib64/libpthread.so && cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/methods/radical && /usr/bin/cmake -DPROGRAM=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/bin/generate_pyx_radical -DOUTPUT_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/mlpack/radical.pyx -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/RunProgram.cmake
[586/628] : && /usr/bin/x86_64-pc-linux-gnu-g++ -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 src/mlpack/methods/radical/CMakeFiles/generate_r_radical.dir/__/__/bindings/R/build/generate_r_radical.cpp.o src/mlpack/methods/radical/CMakeFiles/generate_r_radical.dir/__/__/bindings/R/print_R.cpp.o -o src/mlpack/bindings/R/build/bin/generate_r_radical -Wl,-rpath,/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib lib/libmlpack.so.3.4 /usr/lib64/libarmadillo.so /usr/lib/gcc/x86_64-pc-linux-gnu/11.2.0/libgomp.so /usr/lib64/libpthread.so && cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/methods/radical && /usr/bin/cmake -DGENERATE_BINDING_PROGRAM=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/build/bin/generate_r_radical -DBINDING_OUTPUT_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/mlpack/R/radical.R -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/GenerateBinding.cmake
[587/628] : && /usr/bin/x86_64-pc-linux-gnu-g++ -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 src/mlpack/methods/random_forest/CMakeFiles/generate_r_random_forest.dir/__/__/bindings/R/build/generate_r_random_forest.cpp.o src/mlpack/methods/random_forest/CMakeFiles/generate_r_random_forest.dir/__/__/bindings/R/print_R.cpp.o -o src/mlpack/bindings/R/build/bin/generate_r_random_forest -Wl,-rpath,/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib lib/libmlpack.so.3.4 /usr/lib64/libarmadillo.so /usr/lib/gcc/x86_64-pc-linux-gnu/11.2.0/libgomp.so /usr/lib64/libpthread.so && cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/methods/random_forest && /usr/bin/cmake -DGENERATE_BINDING_PROGRAM=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/build/bin/generate_r_random_forest -DBINDING_OUTPUT_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/mlpack/R/random_forest.R -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/GenerateBinding.cmake
[588/628] : && /usr/bin/x86_64-pc-linux-gnu-g++ -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 src/mlpack/methods/radical/CMakeFiles/mlpack_radical.dir/radical_main.cpp.o -o bin/mlpack_radical -Wl,-rpath,/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib: lib/libmlpack.so.3.4 /usr/lib64/libarmadillo.so -lpthread /usr/lib/gcc/x86_64-pc-linux-gnu/11.2.0/libgomp.so /usr/lib64/libpthread.so && :
[589/628] cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/methods/softmax_regression && /usr/bin/cmake -DNAME=softmax_regression -DGENERATE_CPP_IN=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/R/generate_R.cpp.in -DGENERATE_CPP_OUT=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/build/generate_r_softmax_regression.cpp -DPROGRAM_MAIN_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/methods/softmax_regression/softmax_regression_main.cpp -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/ConfigureFile.cmake
[590/628] /usr/bin/x86_64-pc-linux-gnu-g++ -DARMA_NO_DEBUG -DHAS_OPENMP -DHAS_STB -DNDEBUG -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include/stb -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -DBINDING_TYPE=BINDING_TYPE_R -std=gnu++11 -MD -MT src/mlpack/methods/rann/CMakeFiles/generate_r_krann.dir/__/__/bindings/R/print_R.cpp.o -MF src/mlpack/methods/rann/CMakeFiles/generate_r_krann.dir/__/__/bindings/R/print_R.cpp.o.d -o src/mlpack/methods/rann/CMakeFiles/generate_r_krann.dir/__/__/bindings/R/print_R.cpp.o -c /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/R/print_R.cpp
[591/628] /usr/bin/x86_64-pc-linux-gnu-g++ -DARMA_NO_DEBUG -DHAS_OPENMP -DHAS_STB -DNDEBUG -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include/stb -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -DBINDING_TYPE=BINDING_TYPE_CLI -std=gnu++11 -MD -MT src/mlpack/methods/random_forest/CMakeFiles/mlpack_random_forest.dir/random_forest_main.cpp.o -MF src/mlpack/methods/random_forest/CMakeFiles/mlpack_random_forest.dir/random_forest_main.cpp.o.d -o src/mlpack/methods/random_forest/CMakeFiles/mlpack_random_forest.dir/random_forest_main.cpp.o -c /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/methods/random_forest/random_forest_main.cpp
[592/628] /usr/bin/x86_64-pc-linux-gnu-g++ -DARMA_NO_DEBUG -DHAS_OPENMP -DHAS_STB -DNDEBUG -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include/stb -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -DBINDING_TYPE=BINDING_TYPE_PYX -std=gnu++11 -MD -MT src/mlpack/methods/random_forest/CMakeFiles/generate_pyx_random_forest.dir/__/__/bindings/python/print_pyx.cpp.o -MF src/mlpack/methods/random_forest/CMakeFiles/generate_pyx_random_forest.dir/__/__/bindings/python/print_pyx.cpp.o.d -o src/mlpack/methods/random_forest/CMakeFiles/generate_pyx_random_forest.dir/__/__/bindings/python/print_pyx.cpp.o -c /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/python/print_pyx.cpp
[593/628] /usr/bin/x86_64-pc-linux-gnu-g++ -DARMA_NO_DEBUG -DHAS_OPENMP -DHAS_STB -DNDEBUG -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include/stb -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -DBINDING_TYPE=BINDING_TYPE_PYX -std=gnu++11 -MD -MT src/mlpack/methods/softmax_regression/CMakeFiles/generate_pyx_softmax_regression.dir/__/__/bindings/python/print_pyx.cpp.o -MF src/mlpack/methods/softmax_regression/CMakeFiles/generate_pyx_softmax_regression.dir/__/__/bindings/python/print_pyx.cpp.o.d -o src/mlpack/methods/softmax_regression/CMakeFiles/generate_pyx_softmax_regression.dir/__/__/bindings/python/print_pyx.cpp.o -c /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/python/print_pyx.cpp
[594/628] /usr/bin/x86_64-pc-linux-gnu-g++ -DARMA_NO_DEBUG -DHAS_OPENMP -DHAS_STB -DNDEBUG -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include/stb -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -DBINDING_TYPE=BINDING_TYPE_PYX -std=gnu++11 -MD -MT src/mlpack/methods/rann/CMakeFiles/generate_pyx_krann.dir/__/__/bindings/python/print_pyx.cpp.o -MF src/mlpack/methods/rann/CMakeFiles/generate_pyx_krann.dir/__/__/bindings/python/print_pyx.cpp.o.d -o src/mlpack/methods/rann/CMakeFiles/generate_pyx_krann.dir/__/__/bindings/python/print_pyx.cpp.o -c /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/python/print_pyx.cpp
[595/628] /usr/bin/x86_64-pc-linux-gnu-g++ -DARMA_NO_DEBUG -DHAS_OPENMP -DHAS_STB -DNDEBUG -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include/stb -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -DBINDING_TYPE=BINDING_TYPE_R -std=gnu++11 -MD -MT src/mlpack/methods/rann/CMakeFiles/generate_r_krann.dir/__/__/bindings/R/build/generate_r_krann.cpp.o -MF src/mlpack/methods/rann/CMakeFiles/generate_r_krann.dir/__/__/bindings/R/build/generate_r_krann.cpp.o.d -o src/mlpack/methods/rann/CMakeFiles/generate_r_krann.dir/__/__/bindings/R/build/generate_r_krann.cpp.o -c /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/build/generate_r_krann.cpp
[596/628] /usr/bin/x86_64-pc-linux-gnu-g++ -DARMA_NO_DEBUG -DHAS_OPENMP -DHAS_STB -DNDEBUG -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include/stb -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -DBINDING_TYPE=BINDING_TYPE_PYX -std=gnu++11 -MD -MT src/mlpack/methods/rann/CMakeFiles/generate_pyx_krann.dir/__/__/bindings/python/generate_pyx_krann.cpp.o -MF src/mlpack/methods/rann/CMakeFiles/generate_pyx_krann.dir/__/__/bindings/python/generate_pyx_krann.cpp.o.d -o src/mlpack/methods/rann/CMakeFiles/generate_pyx_krann.dir/__/__/bindings/python/generate_pyx_krann.cpp.o -c /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/generate_pyx_krann.cpp
[597/628] /usr/bin/x86_64-pc-linux-gnu-g++ -DARMA_NO_DEBUG -DHAS_OPENMP -DHAS_STB -DNDEBUG -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include/stb -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -DBINDING_TYPE=BINDING_TYPE_R -std=gnu++11 -MD -MT src/mlpack/methods/softmax_regression/CMakeFiles/generate_r_softmax_regression.dir/__/__/bindings/R/build/generate_r_softmax_regression.cpp.o -MF src/mlpack/methods/softmax_regression/CMakeFiles/generate_r_softmax_regression.dir/__/__/bindings/R/build/generate_r_softmax_regression.cpp.o.d -o src/mlpack/methods/softmax_regression/CMakeFiles/generate_r_softmax_regression.dir/__/__/bindings/R/build/generate_r_softmax_regression.cpp.o -c /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/build/generate_r_softmax_regression.cpp
[598/628] /usr/bin/x86_64-pc-linux-gnu-g++ -DARMA_NO_DEBUG -DHAS_OPENMP -DHAS_STB -DNDEBUG -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include/stb -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -DBINDING_TYPE=BINDING_TYPE_PYX -std=gnu++11 -MD -MT src/mlpack/methods/softmax_regression/CMakeFiles/generate_pyx_softmax_regression.dir/__/__/bindings/python/generate_pyx_softmax_regression.cpp.o -MF src/mlpack/methods/softmax_regression/CMakeFiles/generate_pyx_softmax_regression.dir/__/__/bindings/python/generate_pyx_softmax_regression.cpp.o.d -o src/mlpack/methods/softmax_regression/CMakeFiles/generate_pyx_softmax_regression.dir/__/__/bindings/python/generate_pyx_softmax_regression.cpp.o -c /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/generate_pyx_softmax_regression.cpp
[599/628] cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python && /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/temp/python3.9/bin/python /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/setup.py build_ext --module=radical.pyx
running build_ext
cythoning mlpack/radical.pyx to mlpack/radical.cpp
/usr/lib/python3.9/site-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/mlpack/radical.pyx
tree = Parsing.p_module(s, pxd, full_module_name)
building 'mlpack.radical' extension
x86_64-pc-linux-gnu-g++ -pthread -Os -pipe -march=native -frecord-gcc-switches -fPIC -I/usr/lib/python3.9/site-packages/numpy/core/include -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/ -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include -I/usr/include -I/usr/include -I/usr/include/stb -I/usr/include -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -I/usr/include/python3.9 -c mlpack/radical.cpp -o build/temp.linux-x86_64-3.9/mlpack/radical.o -DBINDING_TYPE=BINDING_TYPE_PYX -std=c++11 -fopenmp -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp
In file included from /usr/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h:1969,
from /usr/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h:12,
from /usr/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h:4,
from mlpack/radical.cpp:635:
/usr/lib/python3.9/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
17 | #warning "Using deprecated NumPy API, disable it with " \
| ^~~~~~~
x86_64-pc-linux-gnu-g++ -pthread -shared -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 -Os -pipe -march=native -frecord-gcc-switches build/temp.linux-x86_64-3.9/mlpack/radical.o -L/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib -L/usr/lib64 -o build/lib.linux-x86_64-3.9/mlpack/radical.cpython-39-x86_64-linux-gnu.so -fopenmp /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib/libmlpack.so /usr/lib64/libarmadillo.so
[600/628] /usr/bin/x86_64-pc-linux-gnu-g++ -DARMA_NO_DEBUG -DHAS_OPENMP -DHAS_STB -DNDEBUG -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include/stb -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -DBINDING_TYPE=BINDING_TYPE_CLI -std=gnu++11 -MD -MT src/mlpack/methods/softmax_regression/CMakeFiles/mlpack_softmax_regression.dir/softmax_regression_main.cpp.o -MF src/mlpack/methods/softmax_regression/CMakeFiles/mlpack_softmax_regression.dir/softmax_regression_main.cpp.o.d -o src/mlpack/methods/softmax_regression/CMakeFiles/mlpack_softmax_regression.dir/softmax_regression_main.cpp.o -c /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/methods/softmax_regression/softmax_regression_main.cpp
[601/628] cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/methods/sparse_coding && /usr/bin/cmake -DGENERATE_CPP_IN=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/python/generate_pyx.cpp.in -DGENERATE_CPP_OUT=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/generate_pyx_sparse_coding.cpp -DPROGRAM_MAIN_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/methods/sparse_coding/sparse_coding_main.cpp -DPROGRAM_NAME=sparse_coding -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/ConfigureFile.cmake
[602/628] cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/methods/sparse_coding && /usr/bin/cmake -DMODEL_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/mlpack/model.txt -DPROGRAM_NAME=sparse_coding -DPROGRAM_MAIN_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/methods/sparse_coding/sparse_coding_main.cpp -DSOURCE_DIR=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1 -DR_CPP_IN=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/R/r_method.cpp.in -DR_CPP_OUT=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/mlpack/src/sparse_coding.cpp -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/R/ConfigureRCPP.cmake
[603/628] cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/methods/sparse_coding && /usr/bin/cmake -DNAME=sparse_coding -DGENERATE_CPP_IN=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/R/generate_R.cpp.in -DGENERATE_CPP_OUT=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/build/generate_r_sparse_coding.cpp -DPROGRAM_MAIN_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/methods/sparse_coding/sparse_coding_main.cpp -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/ConfigureFile.cmake
[604/628] : && /usr/bin/x86_64-pc-linux-gnu-g++ -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 src/mlpack/methods/rann/CMakeFiles/generate_r_krann.dir/__/__/bindings/R/build/generate_r_krann.cpp.o src/mlpack/methods/rann/CMakeFiles/generate_r_krann.dir/__/__/bindings/R/print_R.cpp.o -o src/mlpack/bindings/R/build/bin/generate_r_krann -Wl,-rpath,/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib lib/libmlpack.so.3.4 /usr/lib64/libarmadillo.so /usr/lib/gcc/x86_64-pc-linux-gnu/11.2.0/libgomp.so /usr/lib64/libpthread.so && cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/methods/rann && /usr/bin/cmake -DGENERATE_BINDING_PROGRAM=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/build/bin/generate_r_krann -DBINDING_OUTPUT_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/mlpack/R/krann.R -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/GenerateBinding.cmake
[605/628] : && /usr/bin/x86_64-pc-linux-gnu-g++ -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 src/mlpack/methods/rann/CMakeFiles/generate_pyx_krann.dir/__/__/bindings/python/generate_pyx_krann.cpp.o src/mlpack/methods/rann/CMakeFiles/generate_pyx_krann.dir/__/__/bindings/python/print_pyx.cpp.o -o bin/generate_pyx_krann -Wl,-rpath,/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib lib/libmlpack.so.3.4 /usr/lib64/libarmadillo.so /usr/lib/gcc/x86_64-pc-linux-gnu/11.2.0/libgomp.so /usr/lib64/libpthread.so && cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/methods/rann && /usr/bin/cmake -DPROGRAM=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/bin/generate_pyx_krann -DOUTPUT_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/mlpack/krann.pyx -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/RunProgram.cmake
[606/628] : && /usr/bin/x86_64-pc-linux-gnu-g++ -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 src/mlpack/methods/softmax_regression/CMakeFiles/generate_pyx_softmax_regression.dir/__/__/bindings/python/generate_pyx_softmax_regression.cpp.o src/mlpack/methods/softmax_regression/CMakeFiles/generate_pyx_softmax_regression.dir/__/__/bindings/python/print_pyx.cpp.o -o bin/generate_pyx_softmax_regression -Wl,-rpath,/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib lib/libmlpack.so.3.4 /usr/lib64/libarmadillo.so /usr/lib/gcc/x86_64-pc-linux-gnu/11.2.0/libgomp.so /usr/lib64/libpthread.so && cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/methods/softmax_regression && /usr/bin/cmake -DPROGRAM=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/bin/generate_pyx_softmax_regression -DOUTPUT_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/mlpack/softmax_regression.pyx -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/RunProgram.cmake
[607/628] : && /usr/bin/x86_64-pc-linux-gnu-g++ -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 src/mlpack/methods/random_forest/CMakeFiles/mlpack_random_forest.dir/random_forest_main.cpp.o -o bin/mlpack_random_forest -Wl,-rpath,/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib: lib/libmlpack.so.3.4 /usr/lib64/libarmadillo.so -lpthread /usr/lib/gcc/x86_64-pc-linux-gnu/11.2.0/libgomp.so /usr/lib64/libpthread.so && :
[608/628] : && /usr/bin/x86_64-pc-linux-gnu-g++ -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 src/mlpack/methods/softmax_regression/CMakeFiles/mlpack_softmax_regression.dir/softmax_regression_main.cpp.o -o bin/mlpack_softmax_regression -Wl,-rpath,/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib: lib/libmlpack.so.3.4 /usr/lib64/libarmadillo.so -lpthread /usr/lib/gcc/x86_64-pc-linux-gnu/11.2.0/libgomp.so /usr/lib64/libpthread.so && :
[609/628] : && /usr/bin/x86_64-pc-linux-gnu-g++ -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 src/mlpack/methods/random_forest/CMakeFiles/generate_pyx_random_forest.dir/__/__/bindings/python/generate_pyx_random_forest.cpp.o src/mlpack/methods/random_forest/CMakeFiles/generate_pyx_random_forest.dir/__/__/bindings/python/print_pyx.cpp.o -o bin/generate_pyx_random_forest -Wl,-rpath,/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib lib/libmlpack.so.3.4 /usr/lib64/libarmadillo.so /usr/lib/gcc/x86_64-pc-linux-gnu/11.2.0/libgomp.so /usr/lib64/libpthread.so && cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/methods/random_forest && /usr/bin/cmake -DPROGRAM=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/bin/generate_pyx_random_forest -DOUTPUT_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/mlpack/random_forest.pyx -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/RunProgram.cmake
[610/628] /usr/bin/x86_64-pc-linux-gnu-g++ -DARMA_NO_DEBUG -DHAS_OPENMP -DHAS_STB -DNDEBUG -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include/stb -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -DBINDING_TYPE=BINDING_TYPE_R -std=gnu++11 -MD -MT src/mlpack/methods/softmax_regression/CMakeFiles/generate_r_softmax_regression.dir/__/__/bindings/R/print_R.cpp.o -MF src/mlpack/methods/softmax_regression/CMakeFiles/generate_r_softmax_regression.dir/__/__/bindings/R/print_R.cpp.o.d -o src/mlpack/methods/softmax_regression/CMakeFiles/generate_r_softmax_regression.dir/__/__/bindings/R/print_R.cpp.o -c /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/R/print_R.cpp
[611/628] /usr/bin/x86_64-pc-linux-gnu-g++ -DARMA_NO_DEBUG -DHAS_OPENMP -DHAS_STB -DNDEBUG -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include/stb -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -DBINDING_TYPE=BINDING_TYPE_R -std=gnu++11 -MD -MT src/mlpack/methods/sparse_coding/CMakeFiles/generate_r_sparse_coding.dir/__/__/bindings/R/print_R.cpp.o -MF src/mlpack/methods/sparse_coding/CMakeFiles/generate_r_sparse_coding.dir/__/__/bindings/R/print_R.cpp.o.d -o src/mlpack/methods/sparse_coding/CMakeFiles/generate_r_sparse_coding.dir/__/__/bindings/R/print_R.cpp.o -c /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/R/print_R.cpp
[612/628] : && /usr/bin/x86_64-pc-linux-gnu-g++ -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 src/mlpack/methods/softmax_regression/CMakeFiles/generate_r_softmax_regression.dir/__/__/bindings/R/build/generate_r_softmax_regression.cpp.o src/mlpack/methods/softmax_regression/CMakeFiles/generate_r_softmax_regression.dir/__/__/bindings/R/print_R.cpp.o -o src/mlpack/bindings/R/build/bin/generate_r_softmax_regression -Wl,-rpath,/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib lib/libmlpack.so.3.4 /usr/lib64/libarmadillo.so /usr/lib/gcc/x86_64-pc-linux-gnu/11.2.0/libgomp.so /usr/lib64/libpthread.so && cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/methods/softmax_regression && /usr/bin/cmake -DGENERATE_BINDING_PROGRAM=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/build/bin/generate_r_softmax_regression -DBINDING_OUTPUT_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/mlpack/R/softmax_regression.R -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/GenerateBinding.cmake
[613/628] /usr/bin/x86_64-pc-linux-gnu-g++ -DARMA_NO_DEBUG -DHAS_OPENMP -DHAS_STB -DNDEBUG -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include/stb -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -DBINDING_TYPE=BINDING_TYPE_PYX -std=gnu++11 -MD -MT src/mlpack/methods/sparse_coding/CMakeFiles/generate_pyx_sparse_coding.dir/__/__/bindings/python/print_pyx.cpp.o -MF src/mlpack/methods/sparse_coding/CMakeFiles/generate_pyx_sparse_coding.dir/__/__/bindings/python/print_pyx.cpp.o.d -o src/mlpack/methods/sparse_coding/CMakeFiles/generate_pyx_sparse_coding.dir/__/__/bindings/python/print_pyx.cpp.o -c /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/bindings/python/print_pyx.cpp
[614/628] /usr/bin/x86_64-pc-linux-gnu-g++ -DARMA_NO_DEBUG -DHAS_OPENMP -DHAS_STB -DNDEBUG -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include/stb -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -DBINDING_TYPE=BINDING_TYPE_R -std=gnu++11 -MD -MT src/mlpack/methods/sparse_coding/CMakeFiles/generate_r_sparse_coding.dir/__/__/bindings/R/build/generate_r_sparse_coding.cpp.o -MF src/mlpack/methods/sparse_coding/CMakeFiles/generate_r_sparse_coding.dir/__/__/bindings/R/build/generate_r_sparse_coding.cpp.o.d -o src/mlpack/methods/sparse_coding/CMakeFiles/generate_r_sparse_coding.dir/__/__/bindings/R/build/generate_r_sparse_coding.cpp.o -c /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/build/generate_r_sparse_coding.cpp
[615/628] : && /usr/bin/x86_64-pc-linux-gnu-g++ -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 src/mlpack/methods/sparse_coding/CMakeFiles/generate_r_sparse_coding.dir/__/__/bindings/R/build/generate_r_sparse_coding.cpp.o src/mlpack/methods/sparse_coding/CMakeFiles/generate_r_sparse_coding.dir/__/__/bindings/R/print_R.cpp.o -o src/mlpack/bindings/R/build/bin/generate_r_sparse_coding -Wl,-rpath,/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib lib/libmlpack.so.3.4 /usr/lib64/libarmadillo.so /usr/lib/gcc/x86_64-pc-linux-gnu/11.2.0/libgomp.so /usr/lib64/libpthread.so && cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/methods/sparse_coding && /usr/bin/cmake -DGENERATE_BINDING_PROGRAM=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/build/bin/generate_r_sparse_coding -DBINDING_OUTPUT_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/mlpack/R/sparse_coding.R -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/GenerateBinding.cmake
[616/628] /usr/bin/x86_64-pc-linux-gnu-g++ -DARMA_NO_DEBUG -DHAS_OPENMP -DHAS_STB -DNDEBUG -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include/stb -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -DBINDING_TYPE=BINDING_TYPE_PYX -std=gnu++11 -MD -MT src/mlpack/methods/sparse_coding/CMakeFiles/generate_pyx_sparse_coding.dir/__/__/bindings/python/generate_pyx_sparse_coding.cpp.o -MF src/mlpack/methods/sparse_coding/CMakeFiles/generate_pyx_sparse_coding.dir/__/__/bindings/python/generate_pyx_sparse_coding.cpp.o.d -o src/mlpack/methods/sparse_coding/CMakeFiles/generate_pyx_sparse_coding.dir/__/__/bindings/python/generate_pyx_sparse_coding.cpp.o -c /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/generate_pyx_sparse_coding.cpp
[617/628] : && /usr/bin/x86_64-pc-linux-gnu-g++ -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 src/mlpack/methods/sparse_coding/CMakeFiles/generate_pyx_sparse_coding.dir/__/__/bindings/python/generate_pyx_sparse_coding.cpp.o src/mlpack/methods/sparse_coding/CMakeFiles/generate_pyx_sparse_coding.dir/__/__/bindings/python/print_pyx.cpp.o -o bin/generate_pyx_sparse_coding -Wl,-rpath,/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib lib/libmlpack.so.3.4 /usr/lib64/libarmadillo.so /usr/lib/gcc/x86_64-pc-linux-gnu/11.2.0/libgomp.so /usr/lib64/libpthread.so && cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/methods/sparse_coding && /usr/bin/cmake -DPROGRAM=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/bin/generate_pyx_sparse_coding -DOUTPUT_FILE=/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/mlpack/sparse_coding.pyx -P /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/RunProgram.cmake
[618/628] /usr/bin/x86_64-pc-linux-gnu-g++ -DARMA_NO_DEBUG -DHAS_OPENMP -DHAS_STB -DNDEBUG -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include/stb -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -DBINDING_TYPE=BINDING_TYPE_CLI -std=gnu++11 -MD -MT src/mlpack/methods/rann/CMakeFiles/mlpack_krann.dir/krann_main.cpp.o -MF src/mlpack/methods/rann/CMakeFiles/mlpack_krann.dir/krann_main.cpp.o.d -o src/mlpack/methods/rann/CMakeFiles/mlpack_krann.dir/krann_main.cpp.o -c /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/methods/rann/krann_main.cpp
[619/628] : && /usr/bin/x86_64-pc-linux-gnu-g++ -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 src/mlpack/methods/rann/CMakeFiles/mlpack_krann.dir/krann_main.cpp.o -o bin/mlpack_krann -Wl,-rpath,/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib: lib/libmlpack.so.3.4 /usr/lib64/libarmadillo.so -lpthread /usr/lib/gcc/x86_64-pc-linux-gnu/11.2.0/libgomp.so /usr/lib64/libpthread.so && :
[620/628] cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python && /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/temp/python3.9/bin/python /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/setup.py build_ext --module=softmax_regression.pyx
running build_ext
cythoning mlpack/softmax_regression.pyx to mlpack/softmax_regression.cpp
/usr/lib/python3.9/site-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/mlpack/softmax_regression.pyx
tree = Parsing.p_module(s, pxd, full_module_name)
building 'mlpack.softmax_regression' extension
x86_64-pc-linux-gnu-g++ -pthread -Os -pipe -march=native -frecord-gcc-switches -fPIC -I/usr/lib/python3.9/site-packages/numpy/core/include -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/ -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include -I/usr/include -I/usr/include -I/usr/include/stb -I/usr/include -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -I/usr/include/python3.9 -c mlpack/softmax_regression.cpp -o build/temp.linux-x86_64-3.9/mlpack/softmax_regression.o -DBINDING_TYPE=BINDING_TYPE_PYX -std=c++11 -fopenmp -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp
In file included from /usr/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h:1969,
from /usr/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h:12,
from /usr/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h:4,
from mlpack/softmax_regression.cpp:635:
/usr/lib/python3.9/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
17 | #warning "Using deprecated NumPy API, disable it with " \
| ^~~~~~~
x86_64-pc-linux-gnu-g++ -pthread -shared -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 -Os -pipe -march=native -frecord-gcc-switches build/temp.linux-x86_64-3.9/mlpack/softmax_regression.o -L/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib -L/usr/lib64 -o build/lib.linux-x86_64-3.9/mlpack/softmax_regression.cpython-39-x86_64-linux-gnu.so -fopenmp /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib/libmlpack.so /usr/lib64/libarmadillo.so
[621/628] cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python && /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/temp/python3.9/bin/python /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/setup.py build_ext --module=random_forest.pyx
running build_ext
cythoning mlpack/random_forest.pyx to mlpack/random_forest.cpp
/usr/lib/python3.9/site-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/mlpack/random_forest.pyx
tree = Parsing.p_module(s, pxd, full_module_name)
building 'mlpack.random_forest' extension
x86_64-pc-linux-gnu-g++ -pthread -Os -pipe -march=native -frecord-gcc-switches -fPIC -I/usr/lib/python3.9/site-packages/numpy/core/include -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/ -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include -I/usr/include -I/usr/include -I/usr/include/stb -I/usr/include -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -I/usr/include/python3.9 -c mlpack/random_forest.cpp -o build/temp.linux-x86_64-3.9/mlpack/random_forest.o -DBINDING_TYPE=BINDING_TYPE_PYX -std=c++11 -fopenmp -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp
In file included from /usr/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h:1969,
from /usr/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h:12,
from /usr/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h:4,
from mlpack/random_forest.cpp:635:
/usr/lib/python3.9/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
17 | #warning "Using deprecated NumPy API, disable it with " \
| ^~~~~~~
x86_64-pc-linux-gnu-g++ -pthread -shared -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 -Os -pipe -march=native -frecord-gcc-switches build/temp.linux-x86_64-3.9/mlpack/random_forest.o -L/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib -L/usr/lib64 -o build/lib.linux-x86_64-3.9/mlpack/random_forest.cpython-39-x86_64-linux-gnu.so -fopenmp /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib/libmlpack.so /usr/lib64/libarmadillo.so
[622/628] /usr/bin/x86_64-pc-linux-gnu-g++ -DARMA_NO_DEBUG -DHAS_OPENMP -DHAS_STB -DNDEBUG -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include/stb -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -DBINDING_TYPE=BINDING_TYPE_CLI -std=gnu++11 -MD -MT src/mlpack/methods/sparse_coding/CMakeFiles/mlpack_sparse_coding.dir/sparse_coding_main.cpp.o -MF src/mlpack/methods/sparse_coding/CMakeFiles/mlpack_sparse_coding.dir/sparse_coding_main.cpp.o.d -o src/mlpack/methods/sparse_coding/CMakeFiles/mlpack_sparse_coding.dir/sparse_coding_main.cpp.o -c /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src/mlpack/methods/sparse_coding/sparse_coding_main.cpp
[623/628] : && /usr/bin/x86_64-pc-linux-gnu-g++ -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 src/mlpack/methods/sparse_coding/CMakeFiles/mlpack_sparse_coding.dir/sparse_coding_main.cpp.o -o bin/mlpack_sparse_coding -Wl,-rpath,/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib: lib/libmlpack.so.3.4 /usr/lib64/libarmadillo.so -lpthread /usr/lib/gcc/x86_64-pc-linux-gnu/11.2.0/libgomp.so /usr/lib64/libpthread.so && :
[624/628] cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/bin && /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/allexec2man.sh /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/CMake/exec2man.sh /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/share/man
Generating man page for ./mlpack_adaboost...
Generating man page for ./mlpack_approx_kfn...
Generating man page for ./mlpack_bayesian_linear_regression...
Generating man page for ./mlpack_dbscan...
Generating man page for ./mlpack_decision_tree...
Generating man page for ./mlpack_cf...
Generating man page for ./mlpack_det...
Generating man page for ./mlpack_range_search...
Generating man page for ./mlpack_emst...
Generating man page for ./mlpack_fastmks...
Generating man page for ./mlpack_gmm_probability...
Generating man page for ./mlpack_gmm_generate...
Generating man page for ./mlpack_gmm_train...
Generating man page for ./mlpack_hmm_loglik...
Generating man page for ./mlpack_hmm_train...
Generating man page for ./mlpack_hmm_generate...
Generating man page for ./mlpack_hmm_viterbi...
Generating man page for ./mlpack_hoeffding_tree...
Generating man page for ./mlpack_kde...
Generating man page for ./mlpack_kernel_pca...
Generating man page for ./mlpack_kmeans...
Generating man page for ./mlpack_linear_regression...
Generating man page for ./mlpack_lars...
Generating man page for ./mlpack_linear_svm...
Generating man page for ./mlpack_local_coordinate_coding...
Generating man page for ./mlpack_lmnn...
Generating man page for ./mlpack_logistic_regression...
Generating man page for ./mlpack_lsh...
Generating man page for ./mlpack_mean_shift...
Generating man page for ./mlpack_nca...
Generating man page for ./mlpack_nbc...
Generating man page for ./mlpack_knn...
Generating man page for ./mlpack_pca...
Generating man page for ./mlpack_nmf...
Generating man page for ./mlpack_kfn...
Generating man page for ./mlpack_perceptron...
Generating man page for ./mlpack_preprocess_binarize...
Generating man page for ./mlpack_preprocess_split...
Generating man page for ./mlpack_image_converter...
Generating man page for ./mlpack_preprocess_one_hot_encoding...
Generating man page for ./mlpack_preprocess_imputer...
Generating man page for ./mlpack_preprocess_scale...
Generating man page for ./mlpack_preprocess_describe...
Generating man page for ./mlpack_radical...
Generating man page for ./mlpack_softmax_regression...
Generating man page for ./mlpack_random_forest...
Generating man page for ./mlpack_krann...
Generating man page for ./mlpack_sparse_coding...
[625/628] cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python && /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/temp/python3.9/bin/python /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/setup.py build_ext --module=sparse_coding.pyx
running build_ext
cythoning mlpack/sparse_coding.pyx to mlpack/sparse_coding.cpp
/usr/lib/python3.9/site-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/mlpack/sparse_coding.pyx
tree = Parsing.p_module(s, pxd, full_module_name)
building 'mlpack.sparse_coding' extension
x86_64-pc-linux-gnu-g++ -pthread -Os -pipe -march=native -frecord-gcc-switches -fPIC -I/usr/lib/python3.9/site-packages/numpy/core/include -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/ -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include -I/usr/include -I/usr/include -I/usr/include/stb -I/usr/include -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -I/usr/include/python3.9 -c mlpack/sparse_coding.cpp -o build/temp.linux-x86_64-3.9/mlpack/sparse_coding.o -DBINDING_TYPE=BINDING_TYPE_PYX -std=c++11 -fopenmp -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp
In file included from /usr/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h:1969,
from /usr/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h:12,
from /usr/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h:4,
from mlpack/sparse_coding.cpp:635:
/usr/lib/python3.9/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
17 | #warning "Using deprecated NumPy API, disable it with " \
| ^~~~~~~
x86_64-pc-linux-gnu-g++ -pthread -shared -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 -Os -pipe -march=native -frecord-gcc-switches build/temp.linux-x86_64-3.9/mlpack/sparse_coding.o -L/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib -L/usr/lib64 -o build/lib.linux-x86_64-3.9/mlpack/sparse_coding.cpython-39-x86_64-linux-gnu.so -fopenmp /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib/libmlpack.so /usr/lib64/libarmadillo.so
[626/628] cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python && /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/temp/python3.9/bin/python /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/setup.py build_ext --module=krann.pyx
running build_ext
cythoning mlpack/krann.pyx to mlpack/krann.cpp
/usr/lib/python3.9/site-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/mlpack/krann.pyx
tree = Parsing.p_module(s, pxd, full_module_name)
building 'mlpack.krann' extension
x86_64-pc-linux-gnu-g++ -pthread -Os -pipe -march=native -frecord-gcc-switches -fPIC -I/usr/lib/python3.9/site-packages/numpy/core/include -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/ -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include -I/usr/include -I/usr/include -I/usr/include/stb -I/usr/include -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -I/usr/include/python3.9 -c mlpack/krann.cpp -o build/temp.linux-x86_64-3.9/mlpack/krann.o -DBINDING_TYPE=BINDING_TYPE_PYX -std=c++11 -fopenmp -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp
In file included from /usr/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h:1969,
from /usr/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h:12,
from /usr/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h:4,
from mlpack/krann.cpp:635:
/usr/lib/python3.9/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
17 | #warning "Using deprecated NumPy API, disable it with " \
| ^~~~~~~
x86_64-pc-linux-gnu-g++ -pthread -shared -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 -Os -pipe -march=native -frecord-gcc-switches build/temp.linux-x86_64-3.9/mlpack/krann.o -L/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib -L/usr/lib64 -o build/lib.linux-x86_64-3.9/mlpack/krann.cpython-39-x86_64-linux-gnu.so -fopenmp /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib/libmlpack.so /usr/lib64/libarmadillo.so
[627/628] cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python && /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/temp/python3.9/bin/python /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/setup.py build_ext && cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python && /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/temp/python3.9/bin/python /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/copy_artifacts.py
running build_ext
cythoning mlpack/arma_numpy.pyx to mlpack/arma_numpy.cpp
/usr/lib/python3.9/site-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/mlpack/arma_numpy.pxd
tree = Parsing.p_module(s, pxd, full_module_name)
skipping 'mlpack/adaboost.cpp' Cython extension (up-to-date)
skipping 'mlpack/approx_kfn.cpp' Cython extension (up-to-date)
skipping 'mlpack/bayesian_linear_regression.cpp' Cython extension (up-to-date)
skipping 'mlpack/cf.cpp' Cython extension (up-to-date)
skipping 'mlpack/dbscan.cpp' Cython extension (up-to-date)
skipping 'mlpack/decision_tree.cpp' Cython extension (up-to-date)
skipping 'mlpack/det.cpp' Cython extension (up-to-date)
skipping 'mlpack/emst.cpp' Cython extension (up-to-date)
skipping 'mlpack/fastmks.cpp' Cython extension (up-to-date)
skipping 'mlpack/gmm_train.cpp' Cython extension (up-to-date)
skipping 'mlpack/gmm_generate.cpp' Cython extension (up-to-date)
skipping 'mlpack/gmm_probability.cpp' Cython extension (up-to-date)
skipping 'mlpack/hmm_train.cpp' Cython extension (up-to-date)
skipping 'mlpack/hmm_loglik.cpp' Cython extension (up-to-date)
skipping 'mlpack/hmm_viterbi.cpp' Cython extension (up-to-date)
skipping 'mlpack/hmm_generate.cpp' Cython extension (up-to-date)
skipping 'mlpack/hoeffding_tree.cpp' Cython extension (up-to-date)
skipping 'mlpack/kde.cpp' Cython extension (up-to-date)
skipping 'mlpack/kernel_pca.cpp' Cython extension (up-to-date)
skipping 'mlpack/kmeans.cpp' Cython extension (up-to-date)
skipping 'mlpack/lars.cpp' Cython extension (up-to-date)
skipping 'mlpack/linear_regression.cpp' Cython extension (up-to-date)
skipping 'mlpack/linear_svm.cpp' Cython extension (up-to-date)
skipping 'mlpack/lmnn.cpp' Cython extension (up-to-date)
skipping 'mlpack/local_coordinate_coding.cpp' Cython extension (up-to-date)
skipping 'mlpack/logistic_regression.cpp' Cython extension (up-to-date)
skipping 'mlpack/lsh.cpp' Cython extension (up-to-date)
skipping 'mlpack/mean_shift.cpp' Cython extension (up-to-date)
skipping 'mlpack/nbc.cpp' Cython extension (up-to-date)
skipping 'mlpack/nca.cpp' Cython extension (up-to-date)
skipping 'mlpack/knn.cpp' Cython extension (up-to-date)
skipping 'mlpack/kfn.cpp' Cython extension (up-to-date)
skipping 'mlpack/nmf.cpp' Cython extension (up-to-date)
skipping 'mlpack/pca.cpp' Cython extension (up-to-date)
skipping 'mlpack/perceptron.cpp' Cython extension (up-to-date)
skipping 'mlpack/preprocess_split.cpp' Cython extension (up-to-date)
skipping 'mlpack/preprocess_binarize.cpp' Cython extension (up-to-date)
skipping 'mlpack/preprocess_describe.cpp' Cython extension (up-to-date)
skipping 'mlpack/preprocess_scale.cpp' Cython extension (up-to-date)
skipping 'mlpack/preprocess_one_hot_encoding.cpp' Cython extension (up-to-date)
skipping 'mlpack/image_converter.cpp' Cython extension (up-to-date)
skipping 'mlpack/radical.cpp' Cython extension (up-to-date)
skipping 'mlpack/random_forest.cpp' Cython extension (up-to-date)
skipping 'mlpack/krann.cpp' Cython extension (up-to-date)
skipping 'mlpack/softmax_regression.cpp' Cython extension (up-to-date)
skipping 'mlpack/sparse_coding.cpp' Cython extension (up-to-date)
building 'mlpack.arma_numpy' extension
x86_64-pc-linux-gnu-g++ -pthread -Os -pipe -march=native -frecord-gcc-switches -fPIC -I/usr/lib/python3.9/site-packages/numpy/core/include -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/python/ -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1/src -I/usr/include -I/usr/include -I/usr/include -I/usr/include/stb -I/usr/include -I/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/.. -I/usr/include/python3.9 -c mlpack/arma_numpy.cpp -o build/temp.linux-x86_64-3.9/mlpack/arma_numpy.o -DBINDING_TYPE=BINDING_TYPE_PYX -std=c++11 -fopenmp -Os -pipe -march=native -frecord-gcc-switches -Wall -Wextra -ftemplate-depth=1000 -Wno-unused-function -fopenmp
In file included from /usr/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h:1969,
from /usr/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h:12,
from /usr/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h:4,
from mlpack/arma_numpy.cpp:634:
/usr/lib/python3.9/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
17 | #warning "Using deprecated NumPy API, disable it with " \
| ^~~~~~~
x86_64-pc-linux-gnu-g++ -pthread -shared -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 -Os -pipe -march=native -frecord-gcc-switches build/temp.linux-x86_64-3.9/mlpack/arma_numpy.o -L/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib -L/usr/lib64 -o build/lib.linux-x86_64-3.9/mlpack/arma_numpy.cpython-39-x86_64-linux-gnu.so -fopenmp /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/lib/libmlpack.so /usr/lib64/libarmadillo.so
[628/628] cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/mlpack && /usr/bin/cmake -E remove -f model.txt && cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/mlpack && /usr/bin/Rscript -e 'Rcpp::compileAttributes()' && /usr/bin/Rscript -e 'roxygen2::roxygenize(".")' && cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R && /usr/bin/R CMD build mlpack
Updating roxygen version in /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/mlpack/DESCRIPTION
ℹ Loading mlpack
Exports from /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/mlpack/src/adaboost.cpp:
void adaboost_call(SEXP params, SEXP timers)
SEXP GetParamAdaBoostModelPtr(SEXP params, const std::string& paramName)
void SetParamAdaBoostModelPtr(SEXP params, const std::string& paramName, SEXP ptr)
Rcpp::RawVector SerializeAdaBoostModelPtr(SEXP ptr)
SEXP DeserializeAdaBoostModelPtr(Rcpp::RawVector str)
Exports from /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/mlpack/src/approx_kfn.cpp:
void approx_kfn_call(SEXP params, SEXP timers)
SEXP GetParamApproxKFNModelPtr(SEXP params, const std::string& paramName)
void SetParamApproxKFNModelPtr(SEXP params, const std::string& paramName, SEXP ptr)
Rcpp::RawVector SerializeApproxKFNModelPtr(SEXP ptr)
SEXP DeserializeApproxKFNModelPtr(Rcpp::RawVector str)
Exports from /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/mlpack/src/bayesian_linear_regression.cpp:
void bayesian_linear_regression_call(SEXP params, SEXP timers)
SEXP GetParamBayesianLinearRegressionPtr(SEXP params, const std::string& paramName)
void SetParamBayesianLinearRegressionPtr(SEXP params, const std::string& paramName, SEXP ptr)
Rcpp::RawVector SerializeBayesianLinearRegressionPtr(SEXP ptr)
SEXP DeserializeBayesianLinearRegressionPtr(Rcpp::RawVector str)
Exports from /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/mlpack/src/cf.cpp:
void cf_call(SEXP params, SEXP timers)
SEXP GetParamCFModelPtr(SEXP params, const std::string& paramName)
void SetParamCFModelPtr(SEXP params, const std::string& paramName, SEXP ptr)
Rcpp::RawVector SerializeCFModelPtr(SEXP ptr)
SEXP DeserializeCFModelPtr(Rcpp::RawVector str)
Exports from /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/mlpack/src/dbscan.cpp:
void dbscan_call(SEXP params, SEXP timers)
Exports from /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/mlpack/src/decision_tree.cpp:
void decision_tree_call(SEXP params, SEXP timers)
SEXP GetParamDecisionTreeModelPtr(SEXP params, const std::string& paramName)
void SetParamDecisionTreeModelPtr(SEXP params, const std::string& paramName, SEXP ptr)
Rcpp::RawVector SerializeDecisionTreeModelPtr(SEXP ptr)
SEXP DeserializeDecisionTreeModelPtr(Rcpp::RawVector str)
Exports from /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/mlpack/src/det.cpp:
void det_call(SEXP params, SEXP timers)
SEXP GetParamDTreePtr(SEXP params, const std::string& paramName)
void SetParamDTreePtr(SEXP params, const std::string& paramName, SEXP ptr)
Rcpp::RawVector SerializeDTreePtr(SEXP ptr)
SEXP DeserializeDTreePtr(Rcpp::RawVector str)
Exports from /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/mlpack/src/emst.cpp:
void emst_call(SEXP params, SEXP timers)
Exports from /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/mlpack/src/fastmks.cpp:
void fastmks_call(SEXP params, SEXP timers)
SEXP GetParamFastMKSModelPtr(SEXP params, const std::string& paramName)
void SetParamFastMKSModelPtr(SEXP params, const std::string& paramName, SEXP ptr)
Rcpp::RawVector SerializeFastMKSModelPtr(SEXP ptr)
SEXP DeserializeFastMKSModelPtr(Rcpp::RawVector str)
Exports from /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/mlpack/src/gmm_generate.cpp:
void gmm_generate_call(SEXP params, SEXP timers)
SEXP GetParamGMMPtr(SEXP params, const std::string& paramName)
void SetParamGMMPtr(SEXP params, const std::string& paramName, SEXP ptr)
Rcpp::RawVector SerializeGMMPtr(SEXP ptr)
SEXP DeserializeGMMPtr(Rcpp::RawVector str)
Exports from /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/mlpack/src/gmm_probability.cpp:
void gmm_probability_call(SEXP params, SEXP timers)
Exports from /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/mlpack/src/gmm_train.cpp:
void gmm_train_call(SEXP params, SEXP timers)
Exports from /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/mlpack/src/hmm_generate.cpp:
void hmm_generate_call(SEXP params, SEXP timers)
Exports from /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/mlpack/src/hmm_loglik.cpp:
void hmm_loglik_call(SEXP params, SEXP timers)
Exports from /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/mlpack/src/hmm_train.cpp:
void hmm_train_call(SEXP params, SEXP timers)
SEXP GetParamHMMModelPtr(SEXP params, const std::string& paramName)
void SetParamHMMModelPtr(SEXP params, const std::string& paramName, SEXP ptr)
Rcpp::RawVector SerializeHMMModelPtr(SEXP ptr)
SEXP DeserializeHMMModelPtr(Rcpp::RawVector str)
Exports from /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/mlpack/src/hmm_viterbi.cpp:
void hmm_viterbi_call(SEXP params, SEXP timers)
Exports from /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/mlpack/src/hoeffding_tree.cpp:
void hoeffding_tree_call(SEXP params, SEXP timers)
SEXP GetParamHoeffdingTreeModelPtr(SEXP params, const std::string& paramName)
void SetParamHoeffdingTreeModelPtr(SEXP params, const std::string& paramName, SEXP ptr)
Rcpp::RawVector SerializeHoeffdingTreeModelPtr(SEXP ptr)
SEXP DeserializeHoeffdingTreeModelPtr(Rcpp::RawVector str)
Exports from /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/mlpack/src/image_converter.cpp:
void image_converter_call(SEXP params, SEXP timers)
Exports from /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/mlpack/src/kde.cpp:
void kde_call(SEXP params, SEXP timers)
SEXP GetParamKDEModelPtr(SEXP params, const std::string& paramName)
void SetParamKDEModelPtr(SEXP params, const std::string& paramName, SEXP ptr)
Rcpp::RawVector SerializeKDEModelPtr(SEXP ptr)
SEXP DeserializeKDEModelPtr(Rcpp::RawVector str)
Exports from /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/mlpack/src/kernel_pca.cpp:
void kernel_pca_call(SEXP params, SEXP timers)
Exports from /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/mlpack/src/kfn.cpp:
void kfn_call(SEXP params, SEXP timers)
SEXP GetParamKFNModelPtr(SEXP params, const std::string& paramName)
void SetParamKFNModelPtr(SEXP params, const std::string& paramName, SEXP ptr)
Rcpp::RawVector SerializeKFNModelPtr(SEXP ptr)
SEXP DeserializeKFNModelPtr(Rcpp::RawVector str)
Exports from /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/mlpack/src/kmeans.cpp:
void kmeans_call(SEXP params, SEXP timers)
Exports from /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/mlpack/src/knn.cpp:
void knn_call(SEXP params, SEXP timers)
SEXP GetParamKNNModelPtr(SEXP params, const std::string& paramName)
void SetParamKNNModelPtr(SEXP params, const std::string& paramName, SEXP ptr)
Rcpp::RawVector SerializeKNNModelPtr(SEXP ptr)
SEXP DeserializeKNNModelPtr(Rcpp::RawVector str)
Exports from /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/mlpack/src/krann.cpp:
void krann_call(SEXP params, SEXP timers)
SEXP GetParamRAModelPtr(SEXP params, const std::string& paramName)
void SetParamRAModelPtr(SEXP params, const std::string& paramName, SEXP ptr)
Rcpp::RawVector SerializeRAModelPtr(SEXP ptr)
SEXP DeserializeRAModelPtr(Rcpp::RawVector str)
Exports from /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/mlpack/src/lars.cpp:
void lars_call(SEXP params, SEXP timers)
SEXP GetParamLARSPtr(SEXP params, const std::string& paramName)
void SetParamLARSPtr(SEXP params, const std::string& paramName, SEXP ptr)
Rcpp::RawVector SerializeLARSPtr(SEXP ptr)
SEXP DeserializeLARSPtr(Rcpp::RawVector str)
Exports from /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/mlpack/src/linear_regression.cpp:
void linear_regression_call(SEXP params, SEXP timers)
SEXP GetParamLinearRegressionPtr(SEXP params, const std::string& paramName)
void SetParamLinearRegressionPtr(SEXP params, const std::string& paramName, SEXP ptr)
Rcpp::RawVector SerializeLinearRegressionPtr(SEXP ptr)
SEXP DeserializeLinearRegressionPtr(Rcpp::RawVector str)
Exports from /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/mlpack/src/linear_svm.cpp:
void linear_svm_call(SEXP params, SEXP timers)
SEXP GetParamLinearSVMModelPtr(SEXP params, const std::string& paramName)
void SetParamLinearSVMModelPtr(SEXP params, const std::string& paramName, SEXP ptr)
Rcpp::RawVector SerializeLinearSVMModelPtr(SEXP ptr)
SEXP DeserializeLinearSVMModelPtr(Rcpp::RawVector str)
Exports from /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/mlpack/src/lmnn.cpp:
void lmnn_call(SEXP params, SEXP timers)
Exports from /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/mlpack/src/local_coordinate_coding.cpp:
void local_coordinate_coding_call(SEXP params, SEXP timers)
SEXP GetParamLocalCoordinateCodingPtr(SEXP params, const std::string& paramName)
void SetParamLocalCoordinateCodingPtr(SEXP params, const std::string& paramName, SEXP ptr)
Rcpp::RawVector SerializeLocalCoordinateCodingPtr(SEXP ptr)
SEXP DeserializeLocalCoordinateCodingPtr(Rcpp::RawVector str)
Exports from /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/mlpack/src/logistic_regression.cpp:
void logistic_regression_call(SEXP params, SEXP timers)
SEXP GetParamLogisticRegressionPtr(SEXP params, const std::string& paramName)
void SetParamLogisticRegressionPtr(SEXP params, const std::string& paramName, SEXP ptr)
Rcpp::RawVector SerializeLogisticRegressionPtr(SEXP ptr)
SEXP DeserializeLogisticRegressionPtr(Rcpp::RawVector str)
Exports from /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/mlpack/src/lsh.cpp:
void lsh_call(SEXP params, SEXP timers)
SEXP GetParamLSHSearchPtr(SEXP params, const std::string& paramName)
void SetParamLSHSearchPtr(SEXP params, const std::string& paramName, SEXP ptr)
Rcpp::RawVector SerializeLSHSearchPtr(SEXP ptr)
SEXP DeserializeLSHSearchPtr(Rcpp::RawVector str)
Exports from /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/mlpack/src/mean_shift.cpp:
void mean_shift_call(SEXP params, SEXP timers)
Exports from /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/mlpack/src/nbc.cpp:
void nbc_call(SEXP params, SEXP timers)
SEXP GetParamNBCModelPtr(SEXP params, const std::string& paramName)
void SetParamNBCModelPtr(SEXP params, const std::string& paramName, SEXP ptr)
Rcpp::RawVector SerializeNBCModelPtr(SEXP ptr)
SEXP DeserializeNBCModelPtr(Rcpp::RawVector str)
Exports from /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/mlpack/src/nca.cpp:
void nca_call(SEXP params, SEXP timers)
Exports from /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/mlpack/src/nmf.cpp:
void nmf_call(SEXP params, SEXP timers)
Exports from /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/mlpack/src/pca.cpp:
void pca_call(SEXP params, SEXP timers)
Exports from /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/mlpack/src/perceptron.cpp:
void perceptron_call(SEXP params, SEXP timers)
SEXP GetParamPerceptronModelPtr(SEXP params, const std::string& paramName)
void SetParamPerceptronModelPtr(SEXP params, const std::string& paramName, SEXP ptr)
Rcpp::RawVector SerializePerceptronModelPtr(SEXP ptr)
SEXP DeserializePerceptronModelPtr(Rcpp::RawVector str)
Exports from /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/mlpack/src/preprocess_binarize.cpp:
void preprocess_binarize_call(SEXP params, SEXP timers)
Exports from /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/mlpack/src/preprocess_describe.cpp:
void preprocess_describe_call(SEXP params, SEXP timers)
Exports from /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/mlpack/src/preprocess_one_hot_encoding.cpp:
void preprocess_one_hot_encoding_call(SEXP params, SEXP timers)
Exports from /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/mlpack/src/preprocess_scale.cpp:
void preprocess_scale_call(SEXP params, SEXP timers)
SEXP GetParamScalingModelPtr(SEXP params, const std::string& paramName)
void SetParamScalingModelPtr(SEXP params, const std::string& paramName, SEXP ptr)
Rcpp::RawVector SerializeScalingModelPtr(SEXP ptr)
SEXP DeserializeScalingModelPtr(Rcpp::RawVector str)
Exports from /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/mlpack/src/preprocess_split.cpp:
void preprocess_split_call(SEXP params, SEXP timers)
Exports from /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/mlpack/src/r_util.cpp:
SEXP CreateParams(const std::string& bindingName)
SEXP CreateTimers()
void SetParamInt(SEXP params, const std::string& paramName, int paramValue)
void SetParamDouble(SEXP params, const std::string& paramName, double paramValue)
void SetParamString(SEXP params, const std::string& paramName, std::string& paramValue)
void SetParamBool(SEXP params, const std::string& paramName, bool paramValue)
void SetParamVecString(SEXP params, const std::string& paramName, const std::vector<std::string>& str)
void SetParamVecInt(SEXP params, const std::string& paramName, const std::vector<int>& ints)
void SetParamMat(SEXP params, const std::string& paramName, const arma::mat& paramValue)
void SetParamUMat(SEXP params, const std::string& paramName, const arma::Mat<size_t>& paramValue)
void SetParamRow(SEXP params, const std::string& paramName, const arma::rowvec& paramValue)
void SetParamURow(SEXP params, const std::string& paramName, const arma::Row<size_t>& paramValue)
void SetParamCol(SEXP params, const std::string& paramName, const arma::vec& paramValue)
void SetParamUCol(SEXP params, const std::string& paramName, const arma::Col<size_t>& paramValue)
void SetParamMatWithInfo(SEXP params, const std::string& paramName, const LogicalVector& dimensions, const arma::mat& paramValue)
int GetParamInt(SEXP params, const std::string& paramName)
double GetParamDouble(SEXP params, const std::string& paramName)
std::string& GetParamString(SEXP params, const std::string& paramName)
bool GetParamBool(SEXP params, const std::string& paramName)
const std::vector<std::string>& GetParamVecString(SEXP params, const std::string& paramName)
const std::vector<int>& GetParamVecInt(SEXP params, const std::string& paramName)
const arma::mat& GetParamMat(SEXP params, const std::string& paramName)
const arma::Mat<size_t>& GetParamUMat(SEXP params, const std::string& paramName)
const arma::vec GetParamRow(SEXP params, const std::string& paramName)
const arma::Col<size_t> GetParamURow(SEXP params, const std::string& paramName)
const arma::rowvec GetParamCol(SEXP params, const std::string& paramName)
const arma::Row<size_t> GetParamUCol(SEXP params, const std::string& paramName)
List IO_GetParamMatWithInfo(SEXP params, const std::string& paramName)
void EnableVerbose()
void DisableVerbose()
void ResetTimers()
void SetPassed(SEXP params, const std::string& paramName)
Exports from /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/mlpack/src/radical.cpp:
void radical_call(SEXP params, SEXP timers)
Exports from /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/mlpack/src/random_forest.cpp:
void random_forest_call(SEXP params, SEXP timers)
SEXP GetParamRandomForestModelPtr(SEXP params, const std::string& paramName)
void SetParamRandomForestModelPtr(SEXP params, const std::string& paramName, SEXP ptr)
Rcpp::RawVector SerializeRandomForestModelPtr(SEXP ptr)
SEXP DeserializeRandomForestModelPtr(Rcpp::RawVector str)
Exports from /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/mlpack/src/softmax_regression.cpp:
void softmax_regression_call(SEXP params, SEXP timers)
SEXP GetParamSoftmaxRegressionPtr(SEXP params, const std::string& paramName)
void SetParamSoftmaxRegressionPtr(SEXP params, const std::string& paramName, SEXP ptr)
Rcpp::RawVector SerializeSoftmaxRegressionPtr(SEXP ptr)
SEXP DeserializeSoftmaxRegressionPtr(Rcpp::RawVector str)
Exports from /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/mlpack/src/sparse_coding.cpp:
void sparse_coding_call(SEXP params, SEXP timers)
SEXP GetParamSparseCodingPtr(SEXP params, const std::string& paramName)
void SetParamSparseCodingPtr(SEXP params, const std::string& paramName, SEXP ptr)
Rcpp::RawVector SerializeSparseCodingPtr(SEXP ptr)
SEXP DeserializeSparseCodingPtr(Rcpp::RawVector str)
/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/mlpack/src/RcppExports.cpp updated.
/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/mlpack/R/RcppExports.R updated.
Re-compiling mlpack
─ installing *source* package ‘mlpack’ ...
** using staged installation
** libs
x86_64-pc-linux-gnu-g++ -std=gnu++11 -I"/usr/lib64/R/include" -DNDEBUG -I'/usr/lib64/R/site-library/Rcpp/include' -I'/usr/lib64/R/site-library/RcppArmadillo/include' -I'/usr/lib64/R/site-library/BH/include' -I'/usr/lib64/R/site-library/RcppEnsmallen/include' -DBOOST_MATH_PROMOTE_DOUBLE_POLICY=false -I. -fopenmp -fpic -Os -pipe -march=native -frecord-gcc-switches -UNDEBUG -Wall -pedantic -g -O0 -c RcppExports.cpp -o RcppExports.o
In file included from ./mlpack/methods/neighbor_search/neighbor_search.hpp:25,
from ./mlpack/methods/cf/cf.hpp:20,
from ./mlpack/methods/cf/cf_model.hpp:17,
from ./mlpack/methods/cf/cf_model.cpp:12,
from ../inst/include/mlpack.h:78,
from RcppExports.cpp:4:
./mlpack/methods/neighbor_search/sort_policies/nearest_neighbor_sort.hpp:114:4: warning: extra ‘;’ [-Wpedantic]
114 | };
| ^
| -
./mlpack/methods/neighbor_search/sort_policies/nearest_neighbor_sort.hpp:124:4: warning: extra ‘;’ [-Wpedantic]
124 | };
| ^
| -
In file included from ./mlpack/core/tree/spill_tree/../space_split/hyperplane.hpp:16,
from ./mlpack/core/tree/spill_tree/../space_split/midpoint_space_split.hpp:17,
from ./mlpack/core/tree/spill_tree/spill_tree.hpp:15,
from ./mlpack/core/tree/spill_tree/is_spill_tree.hpp:14,
from ./mlpack/methods/neighbor_search/neighbor_search_rules_impl.hpp:17,
from ./mlpack/methods/neighbor_search/neighbor_search_rules.hpp:238,
from ./mlpack/methods/neighbor_search/neighbor_search.hpp:26,
from ./mlpack/methods/cf/cf.hpp:20,
from ./mlpack/methods/cf/cf_model.hpp:17,
from ./mlpack/methods/cf/cf_model.cpp:12,
from ../inst/include/mlpack.h:78,
from RcppExports.cpp:4:
./mlpack/core/tree/spill_tree/../space_split/projection_vector.hpp:49:4: warning: extra ‘;’ [-Wpedantic]
49 | };
| ^
| -
./mlpack/core/tree/spill_tree/../space_split/projection_vector.hpp:62:4: warning: extra ‘;’ [-Wpedantic]
62 | };
| ^
| -
./mlpack/core/tree/spill_tree/../space_split/projection_vector.hpp:75:4: warning: extra ‘;’ [-Wpedantic]
75 | };
| ^
| -
./mlpack/core/tree/spill_tree/../space_split/projection_vector.hpp:84:4: warning: extra ‘;’ [-Wpedantic]
84 | };
| ^
| -
./mlpack/core/tree/spill_tree/../space_split/projection_vector.hpp:123:4: warning: extra ‘;’ [-Wpedantic]
123 | };
| ^
| -
./mlpack/core/tree/spill_tree/../space_split/projection_vector.hpp:139:4: warning: extra ‘;’ [-Wpedantic]
139 | };
| ^
| -
./mlpack/core/tree/spill_tree/../space_split/projection_vector.hpp:148:4: warning: extra ‘;’ [-Wpedantic]
148 | };
| ^
| -
In file included from ./mlpack/core/tree/spill_tree/../space_split/midpoint_space_split.hpp:17,
from ./mlpack/core/tree/spill_tree/spill_tree.hpp:15,
from ./mlpack/core/tree/spill_tree/is_spill_tree.hpp:14,
from ./mlpack/methods/neighbor_search/neighbor_search_rules_impl.hpp:17,
from ./mlpack/methods/neighbor_search/neighbor_search_rules.hpp:238,
from ./mlpack/methods/neighbor_search/neighbor_search.hpp:26,
from ./mlpack/methods/cf/cf.hpp:20,
from ./mlpack/methods/cf/cf_model.hpp:17,
from ./mlpack/methods/cf/cf_model.cpp:12,
from ../inst/include/mlpack.h:78,
from RcppExports.cpp:4:
./mlpack/core/tree/spill_tree/../space_split/hyperplane.hpp:77:4: warning: extra ‘;’ [-Wpedantic]
77 | };
| ^
| -
./mlpack/core/tree/spill_tree/../space_split/hyperplane.hpp:90:4: warning: extra ‘;’ [-Wpedantic]
90 | };
| ^
| -
./mlpack/core/tree/spill_tree/../space_split/hyperplane.hpp:103:4: warning: extra ‘;’ [-Wpedantic]
103 | };
| ^
| -
./mlpack/core/tree/spill_tree/../space_split/hyperplane.hpp:137:4: warning: extra ‘;’ [-Wpedantic]
137 | };
| ^
| -
In file included from ./mlpack/methods/neighbor_search/typedef.hpp:23,
from ./mlpack/methods/neighbor_search/neighbor_search.hpp:378,
from ./mlpack/methods/cf/cf.hpp:20,
from ./mlpack/methods/cf/cf_model.hpp:17,
from ./mlpack/methods/cf/cf_model.cpp:12,
from ../inst/include/mlpack.h:78,
from RcppExports.cpp:4:
./mlpack/methods/neighbor_search/sort_policies/furthest_neighbor_sort.hpp:110:4: warning: extra ‘;’ [-Wpedantic]
110 | };
| ^
| -
./mlpack/methods/neighbor_search/sort_policies/furthest_neighbor_sort.hpp:120:4: warning: extra ‘;’ [-Wpedantic]
120 | };
| ^
| -
In file included from ./mlpack/methods/kde/kde_model.cpp:12,
from ../inst/include/mlpack.h:83,
from RcppExports.cpp:4:
./mlpack/methods/kde/kde_model.hpp:38:42: warning: extra ‘;’ [-Wpedantic]
38 | HAS_MEM_FUNC(Normalizer, HasNormalizer);
| ^
| -
x86_64-pc-linux-gnu-g++ -std=gnu++11 -I"/usr/lib64/R/include" -DNDEBUG -I'/usr/lib64/R/site-library/Rcpp/include' -I'/usr/lib64/R/site-library/RcppArmadillo/include' -I'/usr/lib64/R/site-library/BH/include' -I'/usr/lib64/R/site-library/RcppEnsmallen/include' -DBOOST_MATH_PROMOTE_DOUBLE_POLICY=false -I. -fopenmp -fpic -Os -pipe -march=native -frecord-gcc-switches -UNDEBUG -Wall -pedantic -g -O0 -c adaboost.cpp -o adaboost.o
x86_64-pc-linux-gnu-g++ -std=gnu++11 -I"/usr/lib64/R/include" -DNDEBUG -I'/usr/lib64/R/site-library/Rcpp/include' -I'/usr/lib64/R/site-library/RcppArmadillo/include' -I'/usr/lib64/R/site-library/BH/include' -I'/usr/lib64/R/site-library/RcppEnsmallen/include' -DBOOST_MATH_PROMOTE_DOUBLE_POLICY=false -I. -fopenmp -fpic -Os -pipe -march=native -frecord-gcc-switches -UNDEBUG -Wall -pedantic -g -O0 -c approx_kfn.cpp -o approx_kfn.o
In file included from ./mlpack/methods/neighbor_search/neighbor_search.hpp:25,
from ./mlpack/methods/approx_kfn/approx_kfn_main.cpp:21,
from approx_kfn.cpp:9:
./mlpack/methods/neighbor_search/sort_policies/nearest_neighbor_sort.hpp:114:4: warning: extra ‘;’ [-Wpedantic]
114 | };
| ^
| -
./mlpack/methods/neighbor_search/sort_policies/nearest_neighbor_sort.hpp:124:4: warning: extra ‘;’ [-Wpedantic]
124 | };
| ^
| -
In file included from ./mlpack/core/tree/spill_tree/../space_split/hyperplane.hpp:16,
from ./mlpack/core/tree/spill_tree/../space_split/midpoint_space_split.hpp:17,
from ./mlpack/core/tree/spill_tree/spill_tree.hpp:15,
from ./mlpack/core/tree/spill_tree/is_spill_tree.hpp:14,
from ./mlpack/methods/neighbor_search/neighbor_search_rules_impl.hpp:17,
from ./mlpack/methods/neighbor_search/neighbor_search_rules.hpp:238,
from ./mlpack/methods/neighbor_search/neighbor_search.hpp:26,
from ./mlpack/methods/approx_kfn/approx_kfn_main.cpp:21,
from approx_kfn.cpp:9:
./mlpack/core/tree/spill_tree/../space_split/projection_vector.hpp:49:4: warning: extra ‘;’ [-Wpedantic]
49 | };
| ^
| -
./mlpack/core/tree/spill_tree/../space_split/projection_vector.hpp:62:4: warning: extra ‘;’ [-Wpedantic]
62 | };
| ^
| -
./mlpack/core/tree/spill_tree/../space_split/projection_vector.hpp:75:4: warning: extra ‘;’ [-Wpedantic]
75 | };
| ^
| -
./mlpack/core/tree/spill_tree/../space_split/projection_vector.hpp:84:4: warning: extra ‘;’ [-Wpedantic]
84 | };
| ^
| -
./mlpack/core/tree/spill_tree/../space_split/projection_vector.hpp:123:4: warning: extra ‘;’ [-Wpedantic]
123 | };
| ^
| -
./mlpack/core/tree/spill_tree/../space_split/projection_vector.hpp:139:4: warning: extra ‘;’ [-Wpedantic]
139 | };
| ^
| -
./mlpack/core/tree/spill_tree/../space_split/projection_vector.hpp:148:4: warning: extra ‘;’ [-Wpedantic]
148 | };
| ^
| -
In file included from ./mlpack/core/tree/spill_tree/../space_split/midpoint_space_split.hpp:17,
from ./mlpack/core/tree/spill_tree/spill_tree.hpp:15,
from ./mlpack/core/tree/spill_tree/is_spill_tree.hpp:14,
from ./mlpack/methods/neighbor_search/neighbor_search_rules_impl.hpp:17,
from ./mlpack/methods/neighbor_search/neighbor_search_rules.hpp:238,
from ./mlpack/methods/neighbor_search/neighbor_search.hpp:26,
from ./mlpack/methods/approx_kfn/approx_kfn_main.cpp:21,
from approx_kfn.cpp:9:
./mlpack/core/tree/spill_tree/../space_split/hyperplane.hpp:77:4: warning: extra ‘;’ [-Wpedantic]
77 | };
| ^
| -
./mlpack/core/tree/spill_tree/../space_split/hyperplane.hpp:90:4: warning: extra ‘;’ [-Wpedantic]
90 | };
| ^
| -
./mlpack/core/tree/spill_tree/../space_split/hyperplane.hpp:103:4: warning: extra ‘;’ [-Wpedantic]
103 | };
| ^
| -
./mlpack/core/tree/spill_tree/../space_split/hyperplane.hpp:137:4: warning: extra ‘;’ [-Wpedantic]
137 | };
| ^
| -
In file included from ./mlpack/methods/neighbor_search/typedef.hpp:23,
from ./mlpack/methods/neighbor_search/neighbor_search.hpp:378,
from ./mlpack/methods/approx_kfn/approx_kfn_main.cpp:21,
from approx_kfn.cpp:9:
./mlpack/methods/neighbor_search/sort_policies/furthest_neighbor_sort.hpp:110:4: warning: extra ‘;’ [-Wpedantic]
110 | };
| ^
| -
./mlpack/methods/neighbor_search/sort_policies/furthest_neighbor_sort.hpp:120:4: warning: extra ‘;’ [-Wpedantic]
120 | };
| ^
| -
x86_64-pc-linux-gnu-g++ -std=gnu++11 -I"/usr/lib64/R/include" -DNDEBUG -I'/usr/lib64/R/site-library/Rcpp/include' -I'/usr/lib64/R/site-library/RcppArmadillo/include' -I'/usr/lib64/R/site-library/BH/include' -I'/usr/lib64/R/site-library/RcppEnsmallen/include' -DBOOST_MATH_PROMOTE_DOUBLE_POLICY=false -I. -fopenmp -fpic -Os -pipe -march=native -frecord-gcc-switches -UNDEBUG -Wall -pedantic -g -O0 -c bayesian_linear_regression.cpp -o bayesian_linear_regression.o
x86_64-pc-linux-gnu-g++ -std=gnu++11 -I"/usr/lib64/R/include" -DNDEBUG -I'/usr/lib64/R/site-library/Rcpp/include' -I'/usr/lib64/R/site-library/RcppArmadillo/include' -I'/usr/lib64/R/site-library/BH/include' -I'/usr/lib64/R/site-library/RcppEnsmallen/include' -DBOOST_MATH_PROMOTE_DOUBLE_POLICY=false -I. -fopenmp -fpic -Os -pipe -march=native -frecord-gcc-switches -UNDEBUG -Wall -pedantic -g -O0 -c cf.cpp -o cf.o
In file included from ./mlpack/methods/neighbor_search/neighbor_search.hpp:25,
from ./mlpack/methods/cf/cf.hpp:20,
from ./mlpack/methods/cf/cf_main.cpp:23,
from cf.cpp:9:
./mlpack/methods/neighbor_search/sort_policies/nearest_neighbor_sort.hpp:114:4: warning: extra ‘;’ [-Wpedantic]
114 | };
| ^
| -
./mlpack/methods/neighbor_search/sort_policies/nearest_neighbor_sort.hpp:124:4: warning: extra ‘;’ [-Wpedantic]
124 | };
| ^
| -
In file included from ./mlpack/core/tree/spill_tree/../space_split/hyperplane.hpp:16,
from ./mlpack/core/tree/spill_tree/../space_split/midpoint_space_split.hpp:17,
from ./mlpack/core/tree/spill_tree/spill_tree.hpp:15,
from ./mlpack/core/tree/spill_tree/is_spill_tree.hpp:14,
from ./mlpack/methods/neighbor_search/neighbor_search_rules_impl.hpp:17,
from ./mlpack/methods/neighbor_search/neighbor_search_rules.hpp:238,
from ./mlpack/methods/neighbor_search/neighbor_search.hpp:26,
from ./mlpack/methods/cf/cf.hpp:20,
from ./mlpack/methods/cf/cf_main.cpp:23,
from cf.cpp:9:
./mlpack/core/tree/spill_tree/../space_split/projection_vector.hpp:49:4: warning: extra ‘;’ [-Wpedantic]
49 | };
| ^
| -
./mlpack/core/tree/spill_tree/../space_split/projection_vector.hpp:62:4: warning: extra ‘;’ [-Wpedantic]
62 | };
| ^
| -
./mlpack/core/tree/spill_tree/../space_split/projection_vector.hpp:75:4: warning: extra ‘;’ [-Wpedantic]
75 | };
| ^
| -
./mlpack/core/tree/spill_tree/../space_split/projection_vector.hpp:84:4: warning: extra ‘;’ [-Wpedantic]
84 | };
| ^
| -
./mlpack/core/tree/spill_tree/../space_split/projection_vector.hpp:123:4: warning: extra ‘;’ [-Wpedantic]
123 | };
| ^
| -
./mlpack/core/tree/spill_tree/../space_split/projection_vector.hpp:139:4: warning: extra ‘;’ [-Wpedantic]
139 | };
| ^
| -
./mlpack/core/tree/spill_tree/../space_split/projection_vector.hpp:148:4: warning: extra ‘;’ [-Wpedantic]
148 | };
| ^
| -
In file included from ./mlpack/core/tree/spill_tree/../space_split/midpoint_space_split.hpp:17,
from ./mlpack/core/tree/spill_tree/spill_tree.hpp:15,
from ./mlpack/core/tree/spill_tree/is_spill_tree.hpp:14,
from ./mlpack/methods/neighbor_search/neighbor_search_rules_impl.hpp:17,
from ./mlpack/methods/neighbor_search/neighbor_search_rules.hpp:238,
from ./mlpack/methods/neighbor_search/neighbor_search.hpp:26,
from ./mlpack/methods/cf/cf.hpp:20,
from ./mlpack/methods/cf/cf_main.cpp:23,
from cf.cpp:9:
./mlpack/core/tree/spill_tree/../space_split/hyperplane.hpp:77:4: warning: extra ‘;’ [-Wpedantic]
77 | };
| ^
| -
./mlpack/core/tree/spill_tree/../space_split/hyperplane.hpp:90:4: warning: extra ‘;’ [-Wpedantic]
90 | };
| ^
| -
./mlpack/core/tree/spill_tree/../space_split/hyperplane.hpp:103:4: warning: extra ‘;’ [-Wpedantic]
103 | };
| ^
| -
./mlpack/core/tree/spill_tree/../space_split/hyperplane.hpp:137:4: warning: extra ‘;’ [-Wpedantic]
137 | };
| ^
| -
In file included from ./mlpack/methods/neighbor_search/typedef.hpp:23,
from ./mlpack/methods/neighbor_search/neighbor_search.hpp:378,
from ./mlpack/methods/cf/cf.hpp:20,
from ./mlpack/methods/cf/cf_main.cpp:23,
from cf.cpp:9:
./mlpack/methods/neighbor_search/sort_policies/furthest_neighbor_sort.hpp:110:4: warning: extra ‘;’ [-Wpedantic]
110 | };
| ^
| -
./mlpack/methods/neighbor_search/sort_policies/furthest_neighbor_sort.hpp:120:4: warning: extra ‘;’ [-Wpedantic]
120 | };
| ^
| -
x86_64-pc-linux-gnu-g++ -std=gnu++11 -I"/usr/lib64/R/include" -DNDEBUG -I'/usr/lib64/R/site-library/Rcpp/include' -I'/usr/lib64/R/site-library/RcppArmadillo/include' -I'/usr/lib64/R/site-library/BH/include' -I'/usr/lib64/R/site-library/RcppEnsmallen/include' -DBOOST_MATH_PROMOTE_DOUBLE_POLICY=false -I. -fopenmp -fpic -Os -pipe -march=native -frecord-gcc-switches -UNDEBUG -Wall -pedantic -g -O0 -c dbscan.cpp -o dbscan.o
x86_64-pc-linux-gnu-g++ -std=gnu++11 -I"/usr/lib64/R/include" -DNDEBUG -I'/usr/lib64/R/site-library/Rcpp/include' -I'/usr/lib64/R/site-library/RcppArmadillo/include' -I'/usr/lib64/R/site-library/BH/include' -I'/usr/lib64/R/site-library/RcppEnsmallen/include' -DBOOST_MATH_PROMOTE_DOUBLE_POLICY=false -I. -fopenmp -fpic -Os -pipe -march=native -frecord-gcc-switches -UNDEBUG -Wall -pedantic -g -O0 -c decision_tree.cpp -o decision_tree.o
x86_64-pc-linux-gnu-g++ -std=gnu++11 -I"/usr/lib64/R/include" -DNDEBUG -I'/usr/lib64/R/site-library/Rcpp/include' -I'/usr/lib64/R/site-library/RcppArmadillo/include' -I'/usr/lib64/R/site-library/BH/include' -I'/usr/lib64/R/site-library/RcppEnsmallen/include' -DBOOST_MATH_PROMOTE_DOUBLE_POLICY=false -I. -fopenmp -fpic -Os -pipe -march=native -frecord-gcc-switches -UNDEBUG -Wall -pedantic -g -O0 -c det.cpp -o det.o
x86_64-pc-linux-gnu-g++ -std=gnu++11 -I"/usr/lib64/R/include" -DNDEBUG -I'/usr/lib64/R/site-library/Rcpp/include' -I'/usr/lib64/R/site-library/RcppArmadillo/include' -I'/usr/lib64/R/site-library/BH/include' -I'/usr/lib64/R/site-library/RcppEnsmallen/include' -DBOOST_MATH_PROMOTE_DOUBLE_POLICY=false -I. -fopenmp -fpic -Os -pipe -march=native -frecord-gcc-switches -UNDEBUG -Wall -pedantic -g -O0 -c emst.cpp -o emst.o
x86_64-pc-linux-gnu-g++ -std=gnu++11 -I"/usr/lib64/R/include" -DNDEBUG -I'/usr/lib64/R/site-library/Rcpp/include' -I'/usr/lib64/R/site-library/RcppArmadillo/include' -I'/usr/lib64/R/site-library/BH/include' -I'/usr/lib64/R/site-library/RcppEnsmallen/include' -DBOOST_MATH_PROMOTE_DOUBLE_POLICY=false -I. -fopenmp -fpic -Os -pipe -march=native -frecord-gcc-switches -UNDEBUG -Wall -pedantic -g -O0 -c fastmks.cpp -o fastmks.o
x86_64-pc-linux-gnu-g++ -std=gnu++11 -I"/usr/lib64/R/include" -DNDEBUG -I'/usr/lib64/R/site-library/Rcpp/include' -I'/usr/lib64/R/site-library/RcppArmadillo/include' -I'/usr/lib64/R/site-library/BH/include' -I'/usr/lib64/R/site-library/RcppEnsmallen/include' -DBOOST_MATH_PROMOTE_DOUBLE_POLICY=false -I. -fopenmp -fpic -Os -pipe -march=native -frecord-gcc-switches -UNDEBUG -Wall -pedantic -g -O0 -c gmm_generate.cpp -o gmm_generate.o
x86_64-pc-linux-gnu-g++ -std=gnu++11 -I"/usr/lib64/R/include" -DNDEBUG -I'/usr/lib64/R/site-library/Rcpp/include' -I'/usr/lib64/R/site-library/RcppArmadillo/include' -I'/usr/lib64/R/site-library/BH/include' -I'/usr/lib64/R/site-library/RcppEnsmallen/include' -DBOOST_MATH_PROMOTE_DOUBLE_POLICY=false -I. -fopenmp -fpic -Os -pipe -march=native -frecord-gcc-switches -UNDEBUG -Wall -pedantic -g -O0 -c gmm_probability.cpp -o gmm_probability.o
x86_64-pc-linux-gnu-g++ -std=gnu++11 -I"/usr/lib64/R/include" -DNDEBUG -I'/usr/lib64/R/site-library/Rcpp/include' -I'/usr/lib64/R/site-library/RcppArmadillo/include' -I'/usr/lib64/R/site-library/BH/include' -I'/usr/lib64/R/site-library/RcppEnsmallen/include' -DBOOST_MATH_PROMOTE_DOUBLE_POLICY=false -I. -fopenmp -fpic -Os -pipe -march=native -frecord-gcc-switches -UNDEBUG -Wall -pedantic -g -O0 -c gmm_train.cpp -o gmm_train.o
x86_64-pc-linux-gnu-g++ -std=gnu++11 -I"/usr/lib64/R/include" -DNDEBUG -I'/usr/lib64/R/site-library/Rcpp/include' -I'/usr/lib64/R/site-library/RcppArmadillo/include' -I'/usr/lib64/R/site-library/BH/include' -I'/usr/lib64/R/site-library/RcppEnsmallen/include' -DBOOST_MATH_PROMOTE_DOUBLE_POLICY=false -I. -fopenmp -fpic -Os -pipe -march=native -frecord-gcc-switches -UNDEBUG -Wall -pedantic -g -O0 -c hmm_generate.cpp -o hmm_generate.o
x86_64-pc-linux-gnu-g++ -std=gnu++11 -I"/usr/lib64/R/include" -DNDEBUG -I'/usr/lib64/R/site-library/Rcpp/include' -I'/usr/lib64/R/site-library/RcppArmadillo/include' -I'/usr/lib64/R/site-library/BH/include' -I'/usr/lib64/R/site-library/RcppEnsmallen/include' -DBOOST_MATH_PROMOTE_DOUBLE_POLICY=false -I. -fopenmp -fpic -Os -pipe -march=native -frecord-gcc-switches -UNDEBUG -Wall -pedantic -g -O0 -c hmm_loglik.cpp -o hmm_loglik.o
x86_64-pc-linux-gnu-g++ -std=gnu++11 -I"/usr/lib64/R/include" -DNDEBUG -I'/usr/lib64/R/site-library/Rcpp/include' -I'/usr/lib64/R/site-library/RcppArmadillo/include' -I'/usr/lib64/R/site-library/BH/include' -I'/usr/lib64/R/site-library/RcppEnsmallen/include' -DBOOST_MATH_PROMOTE_DOUBLE_POLICY=false -I. -fopenmp -fpic -Os -pipe -march=native -frecord-gcc-switches -UNDEBUG -Wall -pedantic -g -O0 -c hmm_train.cpp -o hmm_train.o
x86_64-pc-linux-gnu-g++ -std=gnu++11 -I"/usr/lib64/R/include" -DNDEBUG -I'/usr/lib64/R/site-library/Rcpp/include' -I'/usr/lib64/R/site-library/RcppArmadillo/include' -I'/usr/lib64/R/site-library/BH/include' -I'/usr/lib64/R/site-library/RcppEnsmallen/include' -DBOOST_MATH_PROMOTE_DOUBLE_POLICY=false -I. -fopenmp -fpic -Os -pipe -march=native -frecord-gcc-switches -UNDEBUG -Wall -pedantic -g -O0 -c hmm_viterbi.cpp -o hmm_viterbi.o
x86_64-pc-linux-gnu-g++ -std=gnu++11 -I"/usr/lib64/R/include" -DNDEBUG -I'/usr/lib64/R/site-library/Rcpp/include' -I'/usr/lib64/R/site-library/RcppArmadillo/include' -I'/usr/lib64/R/site-library/BH/include' -I'/usr/lib64/R/site-library/RcppEnsmallen/include' -DBOOST_MATH_PROMOTE_DOUBLE_POLICY=false -I. -fopenmp -fpic -Os -pipe -march=native -frecord-gcc-switches -UNDEBUG -Wall -pedantic -g -O0 -c hoeffding_tree.cpp -o hoeffding_tree.o
x86_64-pc-linux-gnu-g++ -std=gnu++11 -I"/usr/lib64/R/include" -DNDEBUG -I'/usr/lib64/R/site-library/Rcpp/include' -I'/usr/lib64/R/site-library/RcppArmadillo/include' -I'/usr/lib64/R/site-library/BH/include' -I'/usr/lib64/R/site-library/RcppEnsmallen/include' -DBOOST_MATH_PROMOTE_DOUBLE_POLICY=false -I. -fopenmp -fpic -Os -pipe -march=native -frecord-gcc-switches -UNDEBUG -Wall -pedantic -g -O0 -c image_converter.cpp -o image_converter.o
x86_64-pc-linux-gnu-g++ -std=gnu++11 -I"/usr/lib64/R/include" -DNDEBUG -I'/usr/lib64/R/site-library/Rcpp/include' -I'/usr/lib64/R/site-library/RcppArmadillo/include' -I'/usr/lib64/R/site-library/BH/include' -I'/usr/lib64/R/site-library/RcppEnsmallen/include' -DBOOST_MATH_PROMOTE_DOUBLE_POLICY=false -I. -fopenmp -fpic -Os -pipe -march=native -frecord-gcc-switches -UNDEBUG -Wall -pedantic -g -O0 -c kde.cpp -o kde.o
In file included from ./mlpack/methods/kde/kde_main.cpp:24,
from kde.cpp:9:
./mlpack/methods/kde/kde_model.hpp:38:42: warning: extra ‘;’ [-Wpedantic]
38 | HAS_MEM_FUNC(Normalizer, HasNormalizer);
| ^
| -
x86_64-pc-linux-gnu-g++ -std=gnu++11 -I"/usr/lib64/R/include" -DNDEBUG -I'/usr/lib64/R/site-library/Rcpp/include' -I'/usr/lib64/R/site-library/RcppArmadillo/include' -I'/usr/lib64/R/site-library/BH/include' -I'/usr/lib64/R/site-library/RcppEnsmallen/include' -DBOOST_MATH_PROMOTE_DOUBLE_POLICY=false -I. -fopenmp -fpic -Os -pipe -march=native -frecord-gcc-switches -UNDEBUG -Wall -pedantic -g -O0 -c kernel_pca.cpp -o kernel_pca.o
x86_64-pc-linux-gnu-g++ -std=gnu++11 -I"/usr/lib64/R/include" -DNDEBUG -I'/usr/lib64/R/site-library/Rcpp/include' -I'/usr/lib64/R/site-library/RcppArmadillo/include' -I'/usr/lib64/R/site-library/BH/include' -I'/usr/lib64/R/site-library/RcppEnsmallen/include' -DBOOST_MATH_PROMOTE_DOUBLE_POLICY=false -I. -fopenmp -fpic -Os -pipe -march=native -frecord-gcc-switches -UNDEBUG -Wall -pedantic -g -O0 -c kfn.cpp -o kfn.o
In file included from ./mlpack/methods/neighbor_search/neighbor_search.hpp:25,
from ./mlpack/methods/neighbor_search/kfn_main.cpp:27,
from kfn.cpp:9:
./mlpack/methods/neighbor_search/sort_policies/nearest_neighbor_sort.hpp:114:4: warning: extra ‘;’ [-Wpedantic]
114 | };
| ^
| -
./mlpack/methods/neighbor_search/sort_policies/nearest_neighbor_sort.hpp:124:4: warning: extra ‘;’ [-Wpedantic]
124 | };
| ^
| -
In file included from ./mlpack/core/tree/spill_tree/../space_split/hyperplane.hpp:16,
from ./mlpack/core/tree/spill_tree/../space_split/midpoint_space_split.hpp:17,
from ./mlpack/core/tree/spill_tree/spill_tree.hpp:15,
from ./mlpack/core/tree/spill_tree/is_spill_tree.hpp:14,
from ./mlpack/methods/neighbor_search/neighbor_search_rules_impl.hpp:17,
from ./mlpack/methods/neighbor_search/neighbor_search_rules.hpp:238,
from ./mlpack/methods/neighbor_search/neighbor_search.hpp:26,
from ./mlpack/methods/neighbor_search/kfn_main.cpp:27,
from kfn.cpp:9:
./mlpack/core/tree/spill_tree/../space_split/projection_vector.hpp:49:4: warning: extra ‘;’ [-Wpedantic]
49 | };
| ^
| -
./mlpack/core/tree/spill_tree/../space_split/projection_vector.hpp:62:4: warning: extra ‘;’ [-Wpedantic]
62 | };
| ^
| -
./mlpack/core/tree/spill_tree/../space_split/projection_vector.hpp:75:4: warning: extra ‘;’ [-Wpedantic]
75 | };
| ^
| -
./mlpack/core/tree/spill_tree/../space_split/projection_vector.hpp:84:4: warning: extra ‘;’ [-Wpedantic]
84 | };
| ^
| -
./mlpack/core/tree/spill_tree/../space_split/projection_vector.hpp:123:4: warning: extra ‘;’ [-Wpedantic]
123 | };
| ^
| -
./mlpack/core/tree/spill_tree/../space_split/projection_vector.hpp:139:4: warning: extra ‘;’ [-Wpedantic]
139 | };
| ^
| -
./mlpack/core/tree/spill_tree/../space_split/projection_vector.hpp:148:4: warning: extra ‘;’ [-Wpedantic]
148 | };
| ^
| -
In file included from ./mlpack/core/tree/spill_tree/../space_split/midpoint_space_split.hpp:17,
from ./mlpack/core/tree/spill_tree/spill_tree.hpp:15,
from ./mlpack/core/tree/spill_tree/is_spill_tree.hpp:14,
from ./mlpack/methods/neighbor_search/neighbor_search_rules_impl.hpp:17,
from ./mlpack/methods/neighbor_search/neighbor_search_rules.hpp:238,
from ./mlpack/methods/neighbor_search/neighbor_search.hpp:26,
from ./mlpack/methods/neighbor_search/kfn_main.cpp:27,
from kfn.cpp:9:
./mlpack/core/tree/spill_tree/../space_split/hyperplane.hpp:77:4: warning: extra ‘;’ [-Wpedantic]
77 | };
| ^
| -
./mlpack/core/tree/spill_tree/../space_split/hyperplane.hpp:90:4: warning: extra ‘;’ [-Wpedantic]
90 | };
| ^
| -
./mlpack/core/tree/spill_tree/../space_split/hyperplane.hpp:103:4: warning: extra ‘;’ [-Wpedantic]
103 | };
| ^
| -
./mlpack/core/tree/spill_tree/../space_split/hyperplane.hpp:137:4: warning: extra ‘;’ [-Wpedantic]
137 | };
| ^
| -
In file included from ./mlpack/methods/neighbor_search/typedef.hpp:23,
from ./mlpack/methods/neighbor_search/neighbor_search.hpp:378,
from ./mlpack/methods/neighbor_search/kfn_main.cpp:27,
from kfn.cpp:9:
./mlpack/methods/neighbor_search/sort_policies/furthest_neighbor_sort.hpp:110:4: warning: extra ‘;’ [-Wpedantic]
110 | };
| ^
| -
./mlpack/methods/neighbor_search/sort_policies/furthest_neighbor_sort.hpp:120:4: warning: extra ‘;’ [-Wpedantic]
120 | };
| ^
| -
x86_64-pc-linux-gnu-g++ -std=gnu++11 -I"/usr/lib64/R/include" -DNDEBUG -I'/usr/lib64/R/site-library/Rcpp/include' -I'/usr/lib64/R/site-library/RcppArmadillo/include' -I'/usr/lib64/R/site-library/BH/include' -I'/usr/lib64/R/site-library/RcppEnsmallen/include' -DBOOST_MATH_PROMOTE_DOUBLE_POLICY=false -I. -fopenmp -fpic -Os -pipe -march=native -frecord-gcc-switches -UNDEBUG -Wall -pedantic -g -O0 -c kmeans.cpp -o kmeans.o
In file included from ./mlpack/methods/neighbor_search/neighbor_search.hpp:25,
from ./mlpack/methods/kmeans/dual_tree_kmeans.hpp:19,
from ./mlpack/methods/kmeans/kmeans_main.cpp:30,
from kmeans.cpp:9:
./mlpack/methods/neighbor_search/sort_policies/nearest_neighbor_sort.hpp:114:4: warning: extra ‘;’ [-Wpedantic]
114 | };
| ^
| -
./mlpack/methods/neighbor_search/sort_policies/nearest_neighbor_sort.hpp:124:4: warning: extra ‘;’ [-Wpedantic]
124 | };
| ^
| -
In file included from ./mlpack/core/tree/spill_tree/../space_split/hyperplane.hpp:16,
from ./mlpack/core/tree/spill_tree/../space_split/midpoint_space_split.hpp:17,
from ./mlpack/core/tree/spill_tree/spill_tree.hpp:15,
from ./mlpack/core/tree/spill_tree/is_spill_tree.hpp:14,
from ./mlpack/methods/neighbor_search/neighbor_search_rules_impl.hpp:17,
from ./mlpack/methods/neighbor_search/neighbor_search_rules.hpp:238,
from ./mlpack/methods/neighbor_search/neighbor_search.hpp:26,
from ./mlpack/methods/kmeans/dual_tree_kmeans.hpp:19,
from ./mlpack/methods/kmeans/kmeans_main.cpp:30,
from kmeans.cpp:9:
./mlpack/core/tree/spill_tree/../space_split/projection_vector.hpp:49:4: warning: extra ‘;’ [-Wpedantic]
49 | };
| ^
| -
./mlpack/core/tree/spill_tree/../space_split/projection_vector.hpp:62:4: warning: extra ‘;’ [-Wpedantic]
62 | };
| ^
| -
./mlpack/core/tree/spill_tree/../space_split/projection_vector.hpp:75:4: warning: extra ‘;’ [-Wpedantic]
75 | };
| ^
| -
./mlpack/core/tree/spill_tree/../space_split/projection_vector.hpp:84:4: warning: extra ‘;’ [-Wpedantic]
84 | };
| ^
| -
./mlpack/core/tree/spill_tree/../space_split/projection_vector.hpp:123:4: warning: extra ‘;’ [-Wpedantic]
123 | };
| ^
| -
./mlpack/core/tree/spill_tree/../space_split/projection_vector.hpp:139:4: warning: extra ‘;’ [-Wpedantic]
139 | };
| ^
| -
./mlpack/core/tree/spill_tree/../space_split/projection_vector.hpp:148:4: warning: extra ‘;’ [-Wpedantic]
148 | };
| ^
| -
In file included from ./mlpack/core/tree/spill_tree/../space_split/midpoint_space_split.hpp:17,
from ./mlpack/core/tree/spill_tree/spill_tree.hpp:15,
from ./mlpack/core/tree/spill_tree/is_spill_tree.hpp:14,
from ./mlpack/methods/neighbor_search/neighbor_search_rules_impl.hpp:17,
from ./mlpack/methods/neighbor_search/neighbor_search_rules.hpp:238,
from ./mlpack/methods/neighbor_search/neighbor_search.hpp:26,
from ./mlpack/methods/kmeans/dual_tree_kmeans.hpp:19,
from ./mlpack/methods/kmeans/kmeans_main.cpp:30,
from kmeans.cpp:9:
./mlpack/core/tree/spill_tree/../space_split/hyperplane.hpp:77:4: warning: extra ‘;’ [-Wpedantic]
77 | };
| ^
| -
./mlpack/core/tree/spill_tree/../space_split/hyperplane.hpp:90:4: warning: extra ‘;’ [-Wpedantic]
90 | };
| ^
| -
./mlpack/core/tree/spill_tree/../space_split/hyperplane.hpp:103:4: warning: extra ‘;’ [-Wpedantic]
103 | };
| ^
| -
./mlpack/core/tree/spill_tree/../space_split/hyperplane.hpp:137:4: warning: extra ‘;’ [-Wpedantic]
137 | };
| ^
| -
In file included from ./mlpack/methods/neighbor_search/typedef.hpp:23,
from ./mlpack/methods/neighbor_search/neighbor_search.hpp:378,
from ./mlpack/methods/kmeans/dual_tree_kmeans.hpp:19,
from ./mlpack/methods/kmeans/kmeans_main.cpp:30,
from kmeans.cpp:9:
./mlpack/methods/neighbor_search/sort_policies/furthest_neighbor_sort.hpp:110:4: warning: extra ‘;’ [-Wpedantic]
110 | };
| ^
| -
./mlpack/methods/neighbor_search/sort_policies/furthest_neighbor_sort.hpp:120:4: warning: extra ‘;’ [-Wpedantic]
120 | };
| ^
| -
x86_64-pc-linux-gnu-g++ -std=gnu++11 -I"/usr/lib64/R/include" -DNDEBUG -I'/usr/lib64/R/site-library/Rcpp/include' -I'/usr/lib64/R/site-library/RcppArmadillo/include' -I'/usr/lib64/R/site-library/BH/include' -I'/usr/lib64/R/site-library/RcppEnsmallen/include' -DBOOST_MATH_PROMOTE_DOUBLE_POLICY=false -I. -fopenmp -fpic -Os -pipe -march=native -frecord-gcc-switches -UNDEBUG -Wall -pedantic -g -O0 -c knn.cpp -o knn.o
In file included from ./mlpack/methods/neighbor_search/neighbor_search.hpp:25,
from ./mlpack/methods/neighbor_search/knn_main.cpp:29,
from knn.cpp:9:
./mlpack/methods/neighbor_search/sort_policies/nearest_neighbor_sort.hpp:114:4: warning: extra ‘;’ [-Wpedantic]
114 | };
| ^
| -
./mlpack/methods/neighbor_search/sort_policies/nearest_neighbor_sort.hpp:124:4: warning: extra ‘;’ [-Wpedantic]
124 | };
| ^
| -
In file included from ./mlpack/core/tree/spill_tree/../space_split/hyperplane.hpp:16,
from ./mlpack/core/tree/spill_tree/../space_split/midpoint_space_split.hpp:17,
from ./mlpack/core/tree/spill_tree/spill_tree.hpp:15,
from ./mlpack/core/tree/spill_tree/is_spill_tree.hpp:14,
from ./mlpack/methods/neighbor_search/neighbor_search_rules_impl.hpp:17,
from ./mlpack/methods/neighbor_search/neighbor_search_rules.hpp:238,
from ./mlpack/methods/neighbor_search/neighbor_search.hpp:26,
from ./mlpack/methods/neighbor_search/knn_main.cpp:29,
from knn.cpp:9:
./mlpack/core/tree/spill_tree/../space_split/projection_vector.hpp:49:4: warning: extra ‘;’ [-Wpedantic]
49 | };
| ^
| -
./mlpack/core/tree/spill_tree/../space_split/projection_vector.hpp:62:4: warning: extra ‘;’ [-Wpedantic]
62 | };
| ^
| -
./mlpack/core/tree/spill_tree/../space_split/projection_vector.hpp:75:4: warning: extra ‘;’ [-Wpedantic]
75 | };
| ^
| -
./mlpack/core/tree/spill_tree/../space_split/projection_vector.hpp:84:4: warning: extra ‘;’ [-Wpedantic]
84 | };
| ^
| -
./mlpack/core/tree/spill_tree/../space_split/projection_vector.hpp:123:4: warning: extra ‘;’ [-Wpedantic]
123 | };
| ^
| -
./mlpack/core/tree/spill_tree/../space_split/projection_vector.hpp:139:4: warning: extra ‘;’ [-Wpedantic]
139 | };
| ^
| -
./mlpack/core/tree/spill_tree/../space_split/projection_vector.hpp:148:4: warning: extra ‘;’ [-Wpedantic]
148 | };
| ^
| -
In file included from ./mlpack/core/tree/spill_tree/../space_split/midpoint_space_split.hpp:17,
from ./mlpack/core/tree/spill_tree/spill_tree.hpp:15,
from ./mlpack/core/tree/spill_tree/is_spill_tree.hpp:14,
from ./mlpack/methods/neighbor_search/neighbor_search_rules_impl.hpp:17,
from ./mlpack/methods/neighbor_search/neighbor_search_rules.hpp:238,
from ./mlpack/methods/neighbor_search/neighbor_search.hpp:26,
from ./mlpack/methods/neighbor_search/knn_main.cpp:29,
from knn.cpp:9:
./mlpack/core/tree/spill_tree/../space_split/hyperplane.hpp:77:4: warning: extra ‘;’ [-Wpedantic]
77 | };
| ^
| -
./mlpack/core/tree/spill_tree/../space_split/hyperplane.hpp:90:4: warning: extra ‘;’ [-Wpedantic]
90 | };
| ^
| -
./mlpack/core/tree/spill_tree/../space_split/hyperplane.hpp:103:4: warning: extra ‘;’ [-Wpedantic]
103 | };
| ^
| -
./mlpack/core/tree/spill_tree/../space_split/hyperplane.hpp:137:4: warning: extra ‘;’ [-Wpedantic]
137 | };
| ^
| -
In file included from ./mlpack/methods/neighbor_search/typedef.hpp:23,
from ./mlpack/methods/neighbor_search/neighbor_search.hpp:378,
from ./mlpack/methods/neighbor_search/knn_main.cpp:29,
from knn.cpp:9:
./mlpack/methods/neighbor_search/sort_policies/furthest_neighbor_sort.hpp:110:4: warning: extra ‘;’ [-Wpedantic]
110 | };
| ^
| -
./mlpack/methods/neighbor_search/sort_policies/furthest_neighbor_sort.hpp:120:4: warning: extra ‘;’ [-Wpedantic]
120 | };
| ^
| -
x86_64-pc-linux-gnu-g++ -std=gnu++11 -I"/usr/lib64/R/include" -DNDEBUG -I'/usr/lib64/R/site-library/Rcpp/include' -I'/usr/lib64/R/site-library/RcppArmadillo/include' -I'/usr/lib64/R/site-library/BH/include' -I'/usr/lib64/R/site-library/RcppEnsmallen/include' -DBOOST_MATH_PROMOTE_DOUBLE_POLICY=false -I. -fopenmp -fpic -Os -pipe -march=native -frecord-gcc-switches -UNDEBUG -Wall -pedantic -g -O0 -c krann.cpp -o krann.o
In file included from ./mlpack/methods/rann/ra_search.hpp:33,
from ./mlpack/methods/rann/krann_main.cpp:23,
from krann.cpp:9:
./mlpack/methods/neighbor_search/sort_policies/nearest_neighbor_sort.hpp:114:4: warning: extra ‘;’ [-Wpedantic]
114 | };
| ^
| -
./mlpack/methods/neighbor_search/sort_policies/nearest_neighbor_sort.hpp:124:4: warning: extra ‘;’ [-Wpedantic]
124 | };
| ^
| -
In file included from ./mlpack/methods/rann/ra_typedef.hpp:22,
from ./mlpack/methods/rann/ra_search.hpp:409,
from ./mlpack/methods/rann/krann_main.cpp:23,
from krann.cpp:9:
./mlpack/methods/neighbor_search/sort_policies/furthest_neighbor_sort.hpp:110:4: warning: extra ‘;’ [-Wpedantic]
110 | };
| ^
| -
./mlpack/methods/neighbor_search/sort_policies/furthest_neighbor_sort.hpp:120:4: warning: extra ‘;’ [-Wpedantic]
120 | };
| ^
| -
x86_64-pc-linux-gnu-g++ -std=gnu++11 -I"/usr/lib64/R/include" -DNDEBUG -I'/usr/lib64/R/site-library/Rcpp/include' -I'/usr/lib64/R/site-library/RcppArmadillo/include' -I'/usr/lib64/R/site-library/BH/include' -I'/usr/lib64/R/site-library/RcppEnsmallen/include' -DBOOST_MATH_PROMOTE_DOUBLE_POLICY=false -I. -fopenmp -fpic -Os -pipe -march=native -frecord-gcc-switches -UNDEBUG -Wall -pedantic -g -O0 -c lars.cpp -o lars.o
x86_64-pc-linux-gnu-g++ -std=gnu++11 -I"/usr/lib64/R/include" -DNDEBUG -I'/usr/lib64/R/site-library/Rcpp/include' -I'/usr/lib64/R/site-library/RcppArmadillo/include' -I'/usr/lib64/R/site-library/BH/include' -I'/usr/lib64/R/site-library/RcppEnsmallen/include' -DBOOST_MATH_PROMOTE_DOUBLE_POLICY=false -I. -fopenmp -fpic -Os -pipe -march=native -frecord-gcc-switches -UNDEBUG -Wall -pedantic -g -O0 -c linear_regression.cpp -o linear_regression.o
x86_64-pc-linux-gnu-g++ -std=gnu++11 -I"/usr/lib64/R/include" -DNDEBUG -I'/usr/lib64/R/site-library/Rcpp/include' -I'/usr/lib64/R/site-library/RcppArmadillo/include' -I'/usr/lib64/R/site-library/BH/include' -I'/usr/lib64/R/site-library/RcppEnsmallen/include' -DBOOST_MATH_PROMOTE_DOUBLE_POLICY=false -I. -fopenmp -fpic -Os -pipe -march=native -frecord-gcc-switches -UNDEBUG -Wall -pedantic -g -O0 -c linear_svm.cpp -o linear_svm.o
x86_64-pc-linux-gnu-g++ -std=gnu++11 -I"/usr/lib64/R/include" -DNDEBUG -I'/usr/lib64/R/site-library/Rcpp/include' -I'/usr/lib64/R/site-library/RcppArmadillo/include' -I'/usr/lib64/R/site-library/BH/include' -I'/usr/lib64/R/site-library/RcppEnsmallen/include' -DBOOST_MATH_PROMOTE_DOUBLE_POLICY=false -I. -fopenmp -fpic -Os -pipe -march=native -frecord-gcc-switches -UNDEBUG -Wall -pedantic -g -O0 -c lmnn.cpp -o lmnn.o
In file included from ./mlpack/methods/neighbor_search/neighbor_search.hpp:25,
from ./mlpack/methods/lmnn/lmnn_main.cpp:24,
from lmnn.cpp:9:
./mlpack/methods/neighbor_search/sort_policies/nearest_neighbor_sort.hpp:114:4: warning: extra ‘;’ [-Wpedantic]
114 | };
| ^
| -
./mlpack/methods/neighbor_search/sort_policies/nearest_neighbor_sort.hpp:124:4: warning: extra ‘;’ [-Wpedantic]
124 | };
| ^
| -
In file included from ./mlpack/core/tree/spill_tree/../space_split/hyperplane.hpp:16,
from ./mlpack/core/tree/spill_tree/../space_split/midpoint_space_split.hpp:17,
from ./mlpack/core/tree/spill_tree/spill_tree.hpp:15,
from ./mlpack/core/tree/spill_tree/is_spill_tree.hpp:14,
from ./mlpack/methods/neighbor_search/neighbor_search_rules_impl.hpp:17,
from ./mlpack/methods/neighbor_search/neighbor_search_rules.hpp:238,
from ./mlpack/methods/neighbor_search/neighbor_search.hpp:26,
from ./mlpack/methods/lmnn/lmnn_main.cpp:24,
from lmnn.cpp:9:
./mlpack/core/tree/spill_tree/../space_split/projection_vector.hpp:49:4: warning: extra ‘;’ [-Wpedantic]
49 | };
| ^
| -
./mlpack/core/tree/spill_tree/../space_split/projection_vector.hpp:62:4: warning: extra ‘;’ [-Wpedantic]
62 | };
| ^
| -
./mlpack/core/tree/spill_tree/../space_split/projection_vector.hpp:75:4: warning: extra ‘;’ [-Wpedantic]
75 | };
| ^
| -
./mlpack/core/tree/spill_tree/../space_split/projection_vector.hpp:84:4: warning: extra ‘;’ [-Wpedantic]
84 | };
| ^
| -
./mlpack/core/tree/spill_tree/../space_split/projection_vector.hpp:123:4: warning: extra ‘;’ [-Wpedantic]
123 | };
| ^
| -
./mlpack/core/tree/spill_tree/../space_split/projection_vector.hpp:139:4: warning: extra ‘;’ [-Wpedantic]
139 | };
| ^
| -
./mlpack/core/tree/spill_tree/../space_split/projection_vector.hpp:148:4: warning: extra ‘;’ [-Wpedantic]
148 | };
| ^
| -
In file included from ./mlpack/core/tree/spill_tree/../space_split/midpoint_space_split.hpp:17,
from ./mlpack/core/tree/spill_tree/spill_tree.hpp:15,
from ./mlpack/core/tree/spill_tree/is_spill_tree.hpp:14,
from ./mlpack/methods/neighbor_search/neighbor_search_rules_impl.hpp:17,
from ./mlpack/methods/neighbor_search/neighbor_search_rules.hpp:238,
from ./mlpack/methods/neighbor_search/neighbor_search.hpp:26,
from ./mlpack/methods/lmnn/lmnn_main.cpp:24,
from lmnn.cpp:9:
./mlpack/core/tree/spill_tree/../space_split/hyperplane.hpp:77:4: warning: extra ‘;’ [-Wpedantic]
77 | };
| ^
| -
./mlpack/core/tree/spill_tree/../space_split/hyperplane.hpp:90:4: warning: extra ‘;’ [-Wpedantic]
90 | };
| ^
| -
./mlpack/core/tree/spill_tree/../space_split/hyperplane.hpp:103:4: warning: extra ‘;’ [-Wpedantic]
103 | };
| ^
| -
./mlpack/core/tree/spill_tree/../space_split/hyperplane.hpp:137:4: warning: extra ‘;’ [-Wpedantic]
137 | };
| ^
| -
In file included from ./mlpack/methods/neighbor_search/typedef.hpp:23,
from ./mlpack/methods/neighbor_search/neighbor_search.hpp:378,
from ./mlpack/methods/lmnn/lmnn_main.cpp:24,
from lmnn.cpp:9:
./mlpack/methods/neighbor_search/sort_policies/furthest_neighbor_sort.hpp:110:4: warning: extra ‘;’ [-Wpedantic]
110 | };
| ^
| -
./mlpack/methods/neighbor_search/sort_policies/furthest_neighbor_sort.hpp:120:4: warning: extra ‘;’ [-Wpedantic]
120 | };
| ^
| -
x86_64-pc-linux-gnu-g++ -std=gnu++11 -I"/usr/lib64/R/include" -DNDEBUG -I'/usr/lib64/R/site-library/Rcpp/include' -I'/usr/lib64/R/site-library/RcppArmadillo/include' -I'/usr/lib64/R/site-library/BH/include' -I'/usr/lib64/R/site-library/RcppEnsmallen/include' -DBOOST_MATH_PROMOTE_DOUBLE_POLICY=false -I. -fopenmp -fpic -Os -pipe -march=native -frecord-gcc-switches -UNDEBUG -Wall -pedantic -g -O0 -c local_coordinate_coding.cpp -o local_coordinate_coding.o
x86_64-pc-linux-gnu-g++ -std=gnu++11 -I"/usr/lib64/R/include" -DNDEBUG -I'/usr/lib64/R/site-library/Rcpp/include' -I'/usr/lib64/R/site-library/RcppArmadillo/include' -I'/usr/lib64/R/site-library/BH/include' -I'/usr/lib64/R/site-library/RcppEnsmallen/include' -DBOOST_MATH_PROMOTE_DOUBLE_POLICY=false -I. -fopenmp -fpic -Os -pipe -march=native -frecord-gcc-switches -UNDEBUG -Wall -pedantic -g -O0 -c logistic_regression.cpp -o logistic_regression.o
x86_64-pc-linux-gnu-g++ -std=gnu++11 -I"/usr/lib64/R/include" -DNDEBUG -I'/usr/lib64/R/site-library/Rcpp/include' -I'/usr/lib64/R/site-library/RcppArmadillo/include' -I'/usr/lib64/R/site-library/BH/include' -I'/usr/lib64/R/site-library/RcppEnsmallen/include' -DBOOST_MATH_PROMOTE_DOUBLE_POLICY=false -I. -fopenmp -fpic -Os -pipe -march=native -frecord-gcc-switches -UNDEBUG -Wall -pedantic -g -O0 -c lsh.cpp -o lsh.o
In file included from ./mlpack/methods/lsh/lsh_search.hpp:53,
from ./mlpack/methods/lsh/lsh_main.cpp:25,
from lsh.cpp:9:
./mlpack/methods/neighbor_search/sort_policies/nearest_neighbor_sort.hpp:114:4: warning: extra ‘;’ [-Wpedantic]
114 | };
| ^
| -
./mlpack/methods/neighbor_search/sort_policies/nearest_neighbor_sort.hpp:124:4: warning: extra ‘;’ [-Wpedantic]
124 | };
| ^
| -
x86_64-pc-linux-gnu-g++ -std=gnu++11 -I"/usr/lib64/R/include" -DNDEBUG -I'/usr/lib64/R/site-library/Rcpp/include' -I'/usr/lib64/R/site-library/RcppArmadillo/include' -I'/usr/lib64/R/site-library/BH/include' -I'/usr/lib64/R/site-library/RcppEnsmallen/include' -DBOOST_MATH_PROMOTE_DOUBLE_POLICY=false -I. -fopenmp -fpic -Os -pipe -march=native -frecord-gcc-switches -UNDEBUG -Wall -pedantic -g -O0 -c mean_shift.cpp -o mean_shift.o
In file included from ./mlpack/methods/neighbor_search/neighbor_search.hpp:25,
from ./mlpack/methods/mean_shift/mean_shift_impl.hpp:18,
from ./mlpack/methods/mean_shift/mean_shift.hpp:176,
from ./mlpack/methods/mean_shift/mean_shift_main.cpp:23,
from mean_shift.cpp:9:
./mlpack/methods/neighbor_search/sort_policies/nearest_neighbor_sort.hpp:114:4: warning: extra ‘;’ [-Wpedantic]
114 | };
| ^
| -
./mlpack/methods/neighbor_search/sort_policies/nearest_neighbor_sort.hpp:124:4: warning: extra ‘;’ [-Wpedantic]
124 | };
| ^
| -
In file included from ./mlpack/core/tree/spill_tree/../space_split/hyperplane.hpp:16,
from ./mlpack/core/tree/spill_tree/../space_split/midpoint_space_split.hpp:17,
from ./mlpack/core/tree/spill_tree/spill_tree.hpp:15,
from ./mlpack/core/tree/spill_tree/is_spill_tree.hpp:14,
from ./mlpack/methods/neighbor_search/neighbor_search_rules_impl.hpp:17,
from ./mlpack/methods/neighbor_search/neighbor_search_rules.hpp:238,
from ./mlpack/methods/neighbor_search/neighbor_search.hpp:26,
from ./mlpack/methods/mean_shift/mean_shift_impl.hpp:18,
from ./mlpack/methods/mean_shift/mean_shift.hpp:176,
from ./mlpack/methods/mean_shift/mean_shift_main.cpp:23,
from mean_shift.cpp:9:
./mlpack/core/tree/spill_tree/../space_split/projection_vector.hpp:49:4: warning: extra ‘;’ [-Wpedantic]
49 | };
| ^
| -
./mlpack/core/tree/spill_tree/../space_split/projection_vector.hpp:62:4: warning: extra ‘;’ [-Wpedantic]
62 | };
| ^
| -
./mlpack/core/tree/spill_tree/../space_split/projection_vector.hpp:75:4: warning: extra ‘;’ [-Wpedantic]
75 | };
| ^
| -
./mlpack/core/tree/spill_tree/../space_split/projection_vector.hpp:84:4: warning: extra ‘;’ [-Wpedantic]
84 | };
| ^
| -
./mlpack/core/tree/spill_tree/../space_split/projection_vector.hpp:123:4: warning: extra ‘;’ [-Wpedantic]
123 | };
| ^
| -
./mlpack/core/tree/spill_tree/../space_split/projection_vector.hpp:139:4: warning: extra ‘;’ [-Wpedantic]
139 | };
| ^
| -
./mlpack/core/tree/spill_tree/../space_split/projection_vector.hpp:148:4: warning: extra ‘;’ [-Wpedantic]
148 | };
| ^
| -
In file included from ./mlpack/core/tree/spill_tree/../space_split/midpoint_space_split.hpp:17,
from ./mlpack/core/tree/spill_tree/spill_tree.hpp:15,
from ./mlpack/core/tree/spill_tree/is_spill_tree.hpp:14,
from ./mlpack/methods/neighbor_search/neighbor_search_rules_impl.hpp:17,
from ./mlpack/methods/neighbor_search/neighbor_search_rules.hpp:238,
from ./mlpack/methods/neighbor_search/neighbor_search.hpp:26,
from ./mlpack/methods/mean_shift/mean_shift_impl.hpp:18,
from ./mlpack/methods/mean_shift/mean_shift.hpp:176,
from ./mlpack/methods/mean_shift/mean_shift_main.cpp:23,
from mean_shift.cpp:9:
./mlpack/core/tree/spill_tree/../space_split/hyperplane.hpp:77:4: warning: extra ‘;’ [-Wpedantic]
77 | };
| ^
| -
./mlpack/core/tree/spill_tree/../space_split/hyperplane.hpp:90:4: warning: extra ‘;’ [-Wpedantic]
90 | };
| ^
| -
./mlpack/core/tree/spill_tree/../space_split/hyperplane.hpp:103:4: warning: extra ‘;’ [-Wpedantic]
103 | };
| ^
| -
./mlpack/core/tree/spill_tree/../space_split/hyperplane.hpp:137:4: warning: extra ‘;’ [-Wpedantic]
137 | };
| ^
| -
In file included from ./mlpack/methods/neighbor_search/typedef.hpp:23,
from ./mlpack/methods/neighbor_search/neighbor_search.hpp:378,
from ./mlpack/methods/mean_shift/mean_shift_impl.hpp:18,
from ./mlpack/methods/mean_shift/mean_shift.hpp:176,
from ./mlpack/methods/mean_shift/mean_shift_main.cpp:23,
from mean_shift.cpp:9:
./mlpack/methods/neighbor_search/sort_policies/furthest_neighbor_sort.hpp:110:4: warning: extra ‘;’ [-Wpedantic]
110 | };
| ^
| -
./mlpack/methods/neighbor_search/sort_policies/furthest_neighbor_sort.hpp:120:4: warning: extra ‘;’ [-Wpedantic]
120 | };
| ^
| -
x86_64-pc-linux-gnu-g++ -std=gnu++11 -I"/usr/lib64/R/include" -DNDEBUG -I'/usr/lib64/R/site-library/Rcpp/include' -I'/usr/lib64/R/site-library/RcppArmadillo/include' -I'/usr/lib64/R/site-library/BH/include' -I'/usr/lib64/R/site-library/RcppEnsmallen/include' -DBOOST_MATH_PROMOTE_DOUBLE_POLICY=false -I. -fopenmp -fpic -Os -pipe -march=native -frecord-gcc-switches -UNDEBUG -Wall -pedantic -g -O0 -c nbc.cpp -o nbc.o
x86_64-pc-linux-gnu-g++ -std=gnu++11 -I"/usr/lib64/R/include" -DNDEBUG -I'/usr/lib64/R/site-library/Rcpp/include' -I'/usr/lib64/R/site-library/RcppArmadillo/include' -I'/usr/lib64/R/site-library/BH/include' -I'/usr/lib64/R/site-library/RcppEnsmallen/include' -DBOOST_MATH_PROMOTE_DOUBLE_POLICY=false -I. -fopenmp -fpic -Os -pipe -march=native -frecord-gcc-switches -UNDEBUG -Wall -pedantic -g -O0 -c nca.cpp -o nca.o
x86_64-pc-linux-gnu-g++ -std=gnu++11 -I"/usr/lib64/R/include" -DNDEBUG -I'/usr/lib64/R/site-library/Rcpp/include' -I'/usr/lib64/R/site-library/RcppArmadillo/include' -I'/usr/lib64/R/site-library/BH/include' -I'/usr/lib64/R/site-library/RcppEnsmallen/include' -DBOOST_MATH_PROMOTE_DOUBLE_POLICY=false -I. -fopenmp -fpic -Os -pipe -march=native -frecord-gcc-switches -UNDEBUG -Wall -pedantic -g -O0 -c nmf.cpp -o nmf.o
x86_64-pc-linux-gnu-g++ -std=gnu++11 -I"/usr/lib64/R/include" -DNDEBUG -I'/usr/lib64/R/site-library/Rcpp/include' -I'/usr/lib64/R/site-library/RcppArmadillo/include' -I'/usr/lib64/R/site-library/BH/include' -I'/usr/lib64/R/site-library/RcppEnsmallen/include' -DBOOST_MATH_PROMOTE_DOUBLE_POLICY=false -I. -fopenmp -fpic -Os -pipe -march=native -frecord-gcc-switches -UNDEBUG -Wall -pedantic -g -O0 -c pca.cpp -o pca.o
x86_64-pc-linux-gnu-g++ -std=gnu++11 -I"/usr/lib64/R/include" -DNDEBUG -I'/usr/lib64/R/site-library/Rcpp/include' -I'/usr/lib64/R/site-library/RcppArmadillo/include' -I'/usr/lib64/R/site-library/BH/include' -I'/usr/lib64/R/site-library/RcppEnsmallen/include' -DBOOST_MATH_PROMOTE_DOUBLE_POLICY=false -I. -fopenmp -fpic -Os -pipe -march=native -frecord-gcc-switches -UNDEBUG -Wall -pedantic -g -O0 -c perceptron.cpp -o perceptron.o
x86_64-pc-linux-gnu-g++ -std=gnu++11 -I"/usr/lib64/R/include" -DNDEBUG -I'/usr/lib64/R/site-library/Rcpp/include' -I'/usr/lib64/R/site-library/RcppArmadillo/include' -I'/usr/lib64/R/site-library/BH/include' -I'/usr/lib64/R/site-library/RcppEnsmallen/include' -DBOOST_MATH_PROMOTE_DOUBLE_POLICY=false -I. -fopenmp -fpic -Os -pipe -march=native -frecord-gcc-switches -UNDEBUG -Wall -pedantic -g -O0 -c preprocess_binarize.cpp -o preprocess_binarize.o
x86_64-pc-linux-gnu-g++ -std=gnu++11 -I"/usr/lib64/R/include" -DNDEBUG -I'/usr/lib64/R/site-library/Rcpp/include' -I'/usr/lib64/R/site-library/RcppArmadillo/include' -I'/usr/lib64/R/site-library/BH/include' -I'/usr/lib64/R/site-library/RcppEnsmallen/include' -DBOOST_MATH_PROMOTE_DOUBLE_POLICY=false -I. -fopenmp -fpic -Os -pipe -march=native -frecord-gcc-switches -UNDEBUG -Wall -pedantic -g -O0 -c preprocess_describe.cpp -o preprocess_describe.o
x86_64-pc-linux-gnu-g++ -std=gnu++11 -I"/usr/lib64/R/include" -DNDEBUG -I'/usr/lib64/R/site-library/Rcpp/include' -I'/usr/lib64/R/site-library/RcppArmadillo/include' -I'/usr/lib64/R/site-library/BH/include' -I'/usr/lib64/R/site-library/RcppEnsmallen/include' -DBOOST_MATH_PROMOTE_DOUBLE_POLICY=false -I. -fopenmp -fpic -Os -pipe -march=native -frecord-gcc-switches -UNDEBUG -Wall -pedantic -g -O0 -c preprocess_one_hot_encoding.cpp -o preprocess_one_hot_encoding.o
x86_64-pc-linux-gnu-g++ -std=gnu++11 -I"/usr/lib64/R/include" -DNDEBUG -I'/usr/lib64/R/site-library/Rcpp/include' -I'/usr/lib64/R/site-library/RcppArmadillo/include' -I'/usr/lib64/R/site-library/BH/include' -I'/usr/lib64/R/site-library/RcppEnsmallen/include' -DBOOST_MATH_PROMOTE_DOUBLE_POLICY=false -I. -fopenmp -fpic -Os -pipe -march=native -frecord-gcc-switches -UNDEBUG -Wall -pedantic -g -O0 -c preprocess_scale.cpp -o preprocess_scale.o
x86_64-pc-linux-gnu-g++ -std=gnu++11 -I"/usr/lib64/R/include" -DNDEBUG -I'/usr/lib64/R/site-library/Rcpp/include' -I'/usr/lib64/R/site-library/RcppArmadillo/include' -I'/usr/lib64/R/site-library/BH/include' -I'/usr/lib64/R/site-library/RcppEnsmallen/include' -DBOOST_MATH_PROMOTE_DOUBLE_POLICY=false -I. -fopenmp -fpic -Os -pipe -march=native -frecord-gcc-switches -UNDEBUG -Wall -pedantic -g -O0 -c preprocess_split.cpp -o preprocess_split.o
x86_64-pc-linux-gnu-g++ -std=gnu++11 -I"/usr/lib64/R/include" -DNDEBUG -I'/usr/lib64/R/site-library/Rcpp/include' -I'/usr/lib64/R/site-library/RcppArmadillo/include' -I'/usr/lib64/R/site-library/BH/include' -I'/usr/lib64/R/site-library/RcppEnsmallen/include' -DBOOST_MATH_PROMOTE_DOUBLE_POLICY=false -I. -fopenmp -fpic -Os -pipe -march=native -frecord-gcc-switches -UNDEBUG -Wall -pedantic -g -O0 -c r_util.cpp -o r_util.o
x86_64-pc-linux-gnu-g++ -std=gnu++11 -I"/usr/lib64/R/include" -DNDEBUG -I'/usr/lib64/R/site-library/Rcpp/include' -I'/usr/lib64/R/site-library/RcppArmadillo/include' -I'/usr/lib64/R/site-library/BH/include' -I'/usr/lib64/R/site-library/RcppEnsmallen/include' -DBOOST_MATH_PROMOTE_DOUBLE_POLICY=false -I. -fopenmp -fpic -Os -pipe -march=native -frecord-gcc-switches -UNDEBUG -Wall -pedantic -g -O0 -c radical.cpp -o radical.o
x86_64-pc-linux-gnu-g++ -std=gnu++11 -I"/usr/lib64/R/include" -DNDEBUG -I'/usr/lib64/R/site-library/Rcpp/include' -I'/usr/lib64/R/site-library/RcppArmadillo/include' -I'/usr/lib64/R/site-library/BH/include' -I'/usr/lib64/R/site-library/RcppEnsmallen/include' -DBOOST_MATH_PROMOTE_DOUBLE_POLICY=false -I. -fopenmp -fpic -Os -pipe -march=native -frecord-gcc-switches -UNDEBUG -Wall -pedantic -g -O0 -c random_forest.cpp -o random_forest.o
x86_64-pc-linux-gnu-g++ -std=gnu++11 -I"/usr/lib64/R/include" -DNDEBUG -I'/usr/lib64/R/site-library/Rcpp/include' -I'/usr/lib64/R/site-library/RcppArmadillo/include' -I'/usr/lib64/R/site-library/BH/include' -I'/usr/lib64/R/site-library/RcppEnsmallen/include' -DBOOST_MATH_PROMOTE_DOUBLE_POLICY=false -I. -fopenmp -fpic -Os -pipe -march=native -frecord-gcc-switches -UNDEBUG -Wall -pedantic -g -O0 -c softmax_regression.cpp -o softmax_regression.o
x86_64-pc-linux-gnu-g++ -std=gnu++11 -I"/usr/lib64/R/include" -DNDEBUG -I'/usr/lib64/R/site-library/Rcpp/include' -I'/usr/lib64/R/site-library/RcppArmadillo/include' -I'/usr/lib64/R/site-library/BH/include' -I'/usr/lib64/R/site-library/RcppEnsmallen/include' -DBOOST_MATH_PROMOTE_DOUBLE_POLICY=false -I. -fopenmp -fpic -Os -pipe -march=native -frecord-gcc-switches -UNDEBUG -Wall -pedantic -g -O0 -c sparse_coding.cpp -o sparse_coding.o
x86_64-pc-linux-gnu-g++ -std=gnu++11 -shared -L/usr/lib64/R/lib -Wl,-O1 -Wl,--as-needed -Wl,--defsym=__gentoo_check_ldflags__=0 -o mlpack.so RcppExports.o adaboost.o approx_kfn.o bayesian_linear_regression.o cf.o dbscan.o decision_tree.o det.o emst.o fastmks.o gmm_generate.o gmm_probability.o gmm_train.o hmm_generate.o hmm_loglik.o hmm_train.o hmm_viterbi.o hoeffding_tree.o image_converter.o kde.o kernel_pca.o kfn.o kmeans.o knn.o krann.o lars.o linear_regression.o linear_svm.o lmnn.o local_coordinate_coding.o logistic_regression.o lsh.o mean_shift.o nbc.o nca.o nmf.o pca.o perceptron.o preprocess_binarize.o preprocess_describe.o preprocess_one_hot_encoding.o preprocess_scale.o preprocess_split.o r_util.o radical.o random_forest.o softmax_regression.o sparse_coding.o -fopenmp -llapack -lblas -lgfortran -lm -lquadmath -L/usr/lib64/R/lib -lR
installing to /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/temp/Rtmp8nFOj3/devtools_install_c9958d6f9eb/00LOCK-mlpack/00new/mlpack/libs
** checking absolute paths in shared objects and dynamic libraries
─ DONE (mlpack) (946ms)
Writing NAMESPACE
Writing NAMESPACE
Writing adaboost.Rd
Writing approx_kfn.Rd
Writing bayesian_linear_regression.Rd
Writing cf.Rd
Writing dbscan.Rd
Writing decision_tree.Rd
Writing det.Rd
Writing emst.Rd
Writing fastmks.Rd
Writing gmm_generate.Rd
Writing gmm_probability.Rd
Writing gmm_train.Rd
Writing hmm_generate.Rd
Writing hmm_loglik.Rd
Writing hmm_train.Rd
Writing hmm_viterbi.Rd
Writing hoeffding_tree.Rd
Writing image_converter.Rd
Writing kde.Rd
Writing kernel_pca.Rd
Writing kfn.Rd
Writing kmeans.Rd
Writing knn.Rd
Writing krann.Rd
Writing lars.Rd
Writing linear_regression.Rd
Writing linear_svm.Rd
Writing lmnn.Rd
Writing local_coordinate_coding.Rd
Writing logistic_regression.Rd
Writing lsh.Rd
Writing mean_shift.Rd
Writing nbc.Rd
Writing nca.Rd
Writing nmf.Rd
Writing mlpack.Rd
Writing pca.Rd
Writing perceptron.Rd
Writing preprocess_binarize.Rd
Writing preprocess_describe.Rd
Writing preprocess_one_hot_encoding.Rd
Writing preprocess_scale.Rd
Writing preprocess_split.Rd
Writing radical.Rd
Writing random_forest.Rd
Writing mlpack-serialization.Rd
Writing softmax_regression.Rd
Writing sparse_coding.Rd
* checking for file ‘mlpack/DESCRIPTION’ ... OK
* preparing ‘mlpack’:
* checking DESCRIPTION meta-information ... OK
* cleaning src
* running ‘cleanup’
* checking for LF line-endings in source and make files and shell scripts
* checking for empty or unneeded directories
Removed empty directory ‘mlpack/src/mlpack/bindings/R/tests’
* building ‘mlpack_3.4.3.tar.gz’
>>> Source compiled.
* Skipping make test/check due to ebuild restriction.
>>> Test phase [disabled because of RESTRICT=test]: sci-libs/mlpack-3.4.2_p20210802
>>> Install sci-libs/mlpack-3.4.2_p20210802 into /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/image
* Source directory (CMAKE_USE_DIR): "/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1"
* Build directory (BUILD_DIR): "/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build"
[7/57] Running utility command for python_configured
running build
running build_py
copying ./mlpack/matrix_utils.py -> build/lib/mlpack
copying ./mlpack/preprocess_json_params.py -> build/lib/mlpack
warning: build_py: byte-compiling is disabled, skipping.
[8/57] Building Cython binding decision_tree.so.....ssion.so...
running build_ext
skipping 'mlpack/decision_tree.cpp' Cython extension (up-to-date)
[9/57] Building Cython binding approx_kfn.so.....
running build_ext
skipping 'mlpack/approx_kfn.cpp' Cython extension (up-to-date)
[10/57] Building Cython binding bayesian_linear_regression.so...
running build_ext
skipping 'mlpack/bayesian_linear_regression.cpp' Cython extension (up-to-date)
[11/57] Building Cython binding det.so...bi.so...
running build_ext
skipping 'mlpack/det.cpp' Cython extension (up-to-date)
[12/57] Building Cython binding dbscan.so...o...
running build_ext
skipping 'mlpack/dbscan.cpp' Cython extension (up-to-date)
[13/57] Building Cython binding cf.so...g_tree.so...
running build_ext
skipping 'mlpack/cf.cpp' Cython extension (up-to-date)
[14/57] Building Cython binding gmm_generate.so...
running build_ext
skipping 'mlpack/gmm_generate.cpp' Cython extension (up-to-date)
[15/57] Building Cython binding adaboost.so.....
running build_ext
skipping 'mlpack/adaboost.cpp' Cython extension (up-to-date)
[16/57] Building Cython binding gmm_probability.so...
running build_ext
skipping 'mlpack/gmm_probability.cpp' Cython extension (up-to-date)
[17/57] Building Cython binding emst.so...
running build_ext
skipping 'mlpack/emst.cpp' Cython extension (up-to-date)
[18/57] Building Cython binding gmm_train.so...on.so...
running build_ext
skipping 'mlpack/gmm_train.cpp' Cython extension (up-to-date)
[19/57] Building Cython binding fastmks.so......
running build_ext
skipping 'mlpack/fastmks.cpp' Cython extension (up-to-date)
[20/57] Building Cython binding hmm_generate.so...
running build_ext
skipping 'mlpack/hmm_generate.cpp' Cython extension (up-to-date)
[21/57] Building Cython binding hmm_viterbi.so...coding.so...
running build_ext
skipping 'mlpack/hmm_viterbi.cpp' Cython extension (up-to-date)
[22/57] Building Cython binding hoeffding_tree.so...so...
running build_ext
skipping 'mlpack/hoeffding_tree.cpp' Cython extension (up-to-date)
[23/57] Building Cython binding kde.so...
running build_ext
skipping 'mlpack/kde.cpp' Cython extension (up-to-date)
[24/57] Building Cython binding hmm_train.so....
running build_ext
skipping 'mlpack/hmm_train.cpp' Cython extension (up-to-date)
[25/57] Building Cython binding kmeans.so...
running build_ext
skipping 'mlpack/kmeans.cpp' Cython extension (up-to-date)
[26/57] Building Cython binding lars.so...
running build_ext
skipping 'mlpack/lars.cpp' Cython extension (up-to-date)
[27/57] Building Cython binding kernel_pca.so...
running build_ext
skipping 'mlpack/kernel_pca.cpp' Cython extension (up-to-date)
[28/57] Building Cython binding lmnn.so...
running build_ext
skipping 'mlpack/lmnn.cpp' Cython extension (up-to-date)
[29/57] Building Cython binding hmm_loglik.so...
running build_ext
skipping 'mlpack/hmm_loglik.cpp' Cython extension (up-to-date)
[30/57] Building Cython binding linear_regression.so...
running build_ext
skipping 'mlpack/linear_regression.cpp' Cython extension (up-to-date)
[31/57] Building Cython binding linear_svm.so...
running build_ext
skipping 'mlpack/linear_svm.cpp' Cython extension (up-to-date)
[32/57] Building Cython binding local_coordinate_coding.so...o...
running build_ext
skipping 'mlpack/local_coordinate_coding.cpp' Cython extension (up-to-date)
[33/57] Building Cython binding lsh.so...s_describe.so...
running build_ext
skipping 'mlpack/lsh.cpp' Cython extension (up-to-date)
[34/57] Building Cython binding nbc.so...s_binarize.so...
running build_ext
skipping 'mlpack/nbc.cpp' Cython extension (up-to-date)
[35/57] Building Cython binding kfn.so...s_split.so...
running build_ext
skipping 'mlpack/kfn.cpp' Cython extension (up-to-date)
[36/57] Building Cython binding logistic_regression.so...
running build_ext
skipping 'mlpack/logistic_regression.cpp' Cython extension (up-to-date)
[37/57] Building Cython binding mean_shift.so...so...
running build_ext
skipping 'mlpack/mean_shift.cpp' Cython extension (up-to-date)
[38/57] Building Cython binding perceptron.so...
running build_ext
skipping 'mlpack/perceptron.cpp' Cython extension (up-to-date)
[39/57] Building Cython binding nca.so...rest.so...
running build_ext
skipping 'mlpack/nca.cpp' Cython extension (up-to-date)
[40/57] Building Cython binding preprocess_one_hot_encoding.so...
running build_ext
skipping 'mlpack/preprocess_one_hot_encoding.cpp' Cython extension (up-to-date)
[41/57] Building Cython binding knn.so...egression.so...
running build_ext
skipping 'mlpack/knn.cpp' Cython extension (up-to-date)
[42/57] Building Cython binding nmf.so...ding.so...
running build_ext
skipping 'mlpack/nmf.cpp' Cython extension (up-to-date)
[43/57] Building Cython binding pca.so...
running build_ext
skipping 'mlpack/pca.cpp' Cython extension (up-to-date)
[44/57] Running utility command for r_build
FAILED: src/mlpack/bindings/R/CMakeFiles/r_build.util
cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/mlpack && /usr/bin/cmake -E remove -f model.txt && cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R/mlpack && /usr/bin/Rscript -e 'Rcpp::compileAttributes()' && /usr/bin/Rscript -e 'roxygen2::roxygenize(".")' && cd /var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build/src/mlpack/bindings/R && /usr/bin/R CMD build mlpack
ℹ Loading mlpack
Error in dyn.load(dll_copy_file) :
unable to load shared object '/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/temp/Rtmpcy2hq3/pkgload6a42493b900/mlpack.so':
/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/temp/Rtmpcy2hq3/pkgload6a42493b900/mlpack.so: undefined symbol: wrapper2_dgbcon_
Calls: <Anonymous> ... <Anonymous> -> load_dll -> library.dynam2 -> dyn.load
Execution halted
[45/57] Building Cython binding preprocess_split.so...
running build_ext
skipping 'mlpack/preprocess_split.cpp' Cython extension (up-to-date)
[46/57] Building Cython binding preprocess_scale.so...
running build_ext
skipping 'mlpack/preprocess_scale.cpp' Cython extension (up-to-date)
[47/57] Building Cython binding preprocess_describe.so...
running build_ext
skipping 'mlpack/preprocess_describe.cpp' Cython extension (up-to-date)
[48/57] Building Cython binding image_converter.so...
running build_ext
skipping 'mlpack/image_converter.cpp' Cython extension (up-to-date)
[49/57] Building Cython binding preprocess_binarize.so...
running build_ext
skipping 'mlpack/preprocess_binarize.cpp' Cython extension (up-to-date)
[50/57] Building Cython binding random_forest.so...
running build_ext
skipping 'mlpack/random_forest.cpp' Cython extension (up-to-date)
[51/57] Building Cython binding krann.so...
running build_ext
skipping 'mlpack/krann.cpp' Cython extension (up-to-date)
[52/57] Building Cython binding softmax_regression.so...
running build_ext
skipping 'mlpack/softmax_regression.cpp' Cython extension (up-to-date)
[53/57] Building Cython binding radical.so...
running build_ext
skipping 'mlpack/radical.cpp' Cython extension (up-to-date)
[54/57] Building Cython binding sparse_coding.so...
running build_ext
skipping 'mlpack/sparse_coding.cpp' Cython extension (up-to-date)
[55/57] Generating man pages from built executables.
Generating man page for ./mlpack_adaboost...
Generating man page for ./mlpack_approx_kfn...
Generating man page for ./mlpack_bayesian_linear_regression...
Generating man page for ./mlpack_dbscan...
Generating man page for ./mlpack_decision_tree...
Generating man page for ./mlpack_cf...
Generating man page for ./mlpack_det...
Generating man page for ./mlpack_range_search...
Generating man page for ./mlpack_emst...
Generating man page for ./mlpack_fastmks...
Generating man page for ./mlpack_gmm_probability...
Generating man page for ./mlpack_gmm_generate...
Generating man page for ./mlpack_gmm_train...
Generating man page for ./mlpack_hmm_loglik...
Generating man page for ./mlpack_hmm_train...
Generating man page for ./mlpack_hmm_generate...
Generating man page for ./mlpack_hmm_viterbi...
Generating man page for ./mlpack_hoeffding_tree...
Generating man page for ./mlpack_kde...
Generating man page for ./mlpack_kernel_pca...
Generating man page for ./mlpack_kmeans...
Generating man page for ./mlpack_linear_regression...
Generating man page for ./mlpack_lars...
Generating man page for ./mlpack_linear_svm...
Generating man page for ./mlpack_local_coordinate_coding...
Generating man page for ./mlpack_lmnn...
Generating man page for ./mlpack_logistic_regression...
Generating man page for ./mlpack_lsh...
Generating man page for ./mlpack_mean_shift...
Generating man page for ./mlpack_nca...
Generating man page for ./mlpack_nbc...
Generating man page for ./mlpack_knn...
Generating man page for ./mlpack_pca...
Generating man page for ./mlpack_nmf...
Generating man page for ./mlpack_kfn...
Generating man page for ./mlpack_perceptron...
Generating man page for ./mlpack_preprocess_binarize...
Generating man page for ./mlpack_preprocess_split...
Generating man page for ./mlpack_image_converter...
Generating man page for ./mlpack_preprocess_one_hot_encoding...
Generating man page for ./mlpack_preprocess_imputer...
Generating man page for ./mlpack_preprocess_scale...
Generating man page for ./mlpack_preprocess_describe...
Generating man page for ./mlpack_radical...
Generating man page for ./mlpack_softmax_regression...
Generating man page for ./mlpack_random_forest...
Generating man page for ./mlpack_krann...
Generating man page for ./mlpack_sparse_coding...
ninja: build stopped: subcommand failed.
* ERROR: sci-libs/mlpack-3.4.2_p20210802::guru failed (install phase):
* died running ninja install
*
* Call stack:
* ebuild.sh, line 127: Called src_install
* environment, line 3006: Called cmake_src_install
* environment, line 1407: Called die
* The specific snippet of code:
* DESTDIR="${D}" ${CMAKE_MAKEFILE_GENERATOR} install "$@" || die "died running ${CMAKE_MAKEFILE_GENERATOR} install";
*
* If you need support, post the output of `emerge --info '=sci-libs/mlpack-3.4.2_p20210802::guru'`,
* the complete build log and the output of `emerge -pqv '=sci-libs/mlpack-3.4.2_p20210802::guru'`.
* The complete build log is located at '/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/temp/build.log'.
* The ebuild environment file is located at '/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/temp/environment'.
* Working directory: '/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1_build'
* S: '/var/tmp/portage/sci-libs/mlpack-3.4.2_p20210802/work/mlpack-7176ce8d624acf6cd83b1798a3a37ce92d86bbe1'
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