Skip to content

Instantly share code, notes, and snippets.

@AntonPetrov
Created September 6, 2018 13:43
Show Gist options
  • Save AntonPetrov/f22069504dc29be7e8dc8680b7fd0ed7 to your computer and use it in GitHub Desktop.
Save AntonPetrov/f22069504dc29be7e8dc8680b7fd0ed7 to your computer and use it in GitHub Desktop.
Rfam sequence search example
>GenomeXXX
CCAGAACGACAACCGAACACCGCAGCCGAAGACGTCGTGCGGGAGAGTCCTCACCAGCGG
ATGAGGCGCCGAAGGAGCAATACTCCCCGCCAAACTCTCAGGCCCAGTCACCGCACGGCA
CCAGGCTGAACACGGAGAAAAGCAGGGGCGCGCGAGCGCCTCTCGCCCAAGGTGCAAGCC
GCGCGTTCCGGCGTGGTGAAACTCTCAGGCCAATGACTCCGGGGAGACCGCCGACCAGCG
CATGCCCGCGCGGGTCGCAGTCGAGCTGGCCCGGATAAGGTAAGGCCGAAGTGAGCGGCC
CGGCTCTGGACTGCCGACCGGCGCCCCCACCAGGAGGAGTTCCGCACCATGTCGTCGCCC
CGGCAGACACCCCTGCACGAGATCCACGAAGCGCTCGGCGCCACCTTCACCGAGTTCGCC
GGCTGGCGGATGCCGCTGCGCTACACGGGCGACGCGGCCGAGCACAACGCGGTGCGCACC
GCCGCGGGCCTGTTCGACTTGACCCACATGGGTGAAATCCGCATCAGCGGCCCGCAGGCG
CCCGAGGCCCTGGACTACGCGCTGGTGGCCAACGCGTCGGCCATCACCGTCGGCCGTGCC
CGCTACACCATGATCTGCAACTCCGAGGGCGGCGTCCTCGACGACCTGATCGTCTACCGG
CTGGGCGAGCAGGAGTACCTGGTGGTGGCCAACGCCGCCAACGCCGCGGTGGTCTCGGCC
GAGCTGGCCGAGCGGGTCGCCCGGTTCGAGGCGAGCCACGAGGACGTCTCCGACGACTAC
GCGCTCATCGCCGTGCAGGGCCCGAAGGCGGTGGACATCCTCGCGCCGCTGACCAGCACG
GACCTGAGCACGGTCAAGTACTACGCCGGTTACCGCAGCGAGGTCGCCGGCGCGCGCGTC
ATGCTGGCCCGCACCGGCTACACCGGCGAGGACGGCTTCGAGCTGTTCACCTCCCCCGCC
GACGCCCCCGCCGTGTGGCAGGCGCTGGCCGACTCCGGCGCCGAGCACGGGCTGCGCCCG
GCCGGGCTGTCCTGCCGCGACACGCTGCGGCTGGAGGCGGGCATGCCGCTGTACGGCAAC
GAGCTCTCGGCGGAGCTGACGCCGTTCCACGCCAACCTCGGCCGGGTCGTCAAGCTCGAC
AAGCCCGGCGACTTCGTGGGCAAGGCGCCGCTGGCCGCGGCCGCCGAGAAGCCCACCGAG
CGCAAGCTCGTCGGCCTGCGCACCGACCAGCGCCGCGCCCCCCGCCACGGCTACCGGGTG
CTCGACGCCGGCGGAGCCGAGATCGGCGTCGTCACCAGCGGCGCGCCCTCCCCGACCCTG
GGACACCCGATCGCGATGGCCTACGTCGACCGGGACCACGCCGAACCCGGCACCGCCCTG
CAGGTGGACATCCGCGGCACGGCCGTCCCGGTGGAGGTCGTCGCACTGCCCTTCTACCGC
CGCAACGCCTGACCAGCCACCGAAGCCGAGATCCAACAGGAGGCAAAACATGTCGACACC
CGGACAGTTCAACAGCGAGCTCTCCGCCGTGGACCCCGAGGTGGCTGCGGCGGTGGGGGC
CGAGCTGAACCGTCAGCAGACGACCCTGGAGATGATCGCTTCGGAGAACTTCGCGCCGCA
GGCGGTGTTGCAGGCGCAGGGTTCGGTTCTGACCAACAAGTACGCCGAGGGGTATCCGGG
CAAGCGCTACTACGGCGGTTGCGAGCACGTCGACGTCGTCGAGCAGCTGGCCATCGACCG
GGTCAAGGAGCTCTTCGGCGCCTCGTTCGCCAACGTGCAGCCGCACTCGGGGGCCCAGGC
CAACGCCGCGGCGATGTTCGCGCTGCTCAAGCCCGGTGACACGATCATGGGCCTGGACCT
GGCCCACGGCGGGCACCTGACCCACGGGATGCGGATCAACTTCTCCGGCAAGCTCTACAA
CGTGGTGCCCTACCACGTCGGCGACGACGACCACCGGGTCGACATGGACGAGGTGGCCCG
CCTGGCCCGCGAGCACCGGCCGCGGCTGATCATCGCCGGCTGGTCGGCCTACCCGCGCCA
GCTGGACTTCGCGCGGTTCCGCGAGATCGCCGACGAGGTCGGCGCGTACCTGATGGTCGA
CATGGCCCACTTCGCCGGGCTGGTGGCCGCCGGGCTGCACCCGAACCCGGTGCCGCACGC
CCACGTGGTCACCACCACCACGCACAAGACCCTCGGCGGCCCGCGTGGCGGGGTGATCCT
GTCGGCCGACGAGGAGTTCACCAAGAAGTTCAACTCCGCGGTGTTCCCCGGCCAGCAGGG
CGGTCCGCTGGAGCACGTCATCGCGGGCAAGGCGGTGCTGTTCAAGCTCGCCGCGGGTGA
GGAGTTCCGCGACCGGCAGCGGCGCACCCTGGAGGGCGCCAAGATCCTGGCCGAGCGGCT
GCTGGCCGACGACGCGGCCCGGGCCGGGGTCCGGCTGGTCTCCGGCGGCACCGACGTGCA
CCTGGTGCTGGTGGACCTGCGCGAGGCCGAACTGGACGGCAAGCAGGCCGAGGACCGCCT
GCACGAGATCGGGATCACGGTCAACCGCAACGCGGTGCCCAACGACCCCCGCCCGCCGAT
GGTGACCTCCGGCCTGCGCATCGGCACCCCGGCACTGGCCACCCGCGGCTTCGGCAAGAC
CGAGTTCACCGAAGTCGCCGACATCATCGCCGAAGCCCTCAAACCCGACTTCGACGAGGC
CACCAGCGCCAAGCTGCGCTCCCGGGTGGAGGCGCTGGCCGCCGGCTTCCCGCTCTACCC
CAACCTGTAAACGCACGACCACGCGAAGCCGCATTTCGTCCGATTCCGGACGGAATGCGG
CTTCGTGCTGTCCACAGTGGTGTCCCCCTTTCGGCCACAATCCGAAAAAGGCTTACCCGA
AAACGCATTCCTCCCTTGCGGGCTCCAGCGCGATAGCCCAATATCTCGGCAAGCCAGGCG
CACCCGGGACGACGTGCCGCGTGCCGGTCGACCGCCCGCGCGCCGCACA
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment