Skip to content

Instantly share code, notes, and snippets.

View Athanaseus's full-sized avatar

Athanaseus Javas Ramaila Athanaseus

  • South African Radio Astronomy Observatory
  • Cape Town
  • 12:53 (UTC +02:00)
View GitHub Profile
"""I am going to upgrade your configuration in:
ramaila/.casa/ipython
Initializing from configuration: /casa-release-4.7.0-el6/lib/python2.7/site-packages/IPython/UserConfig
Problem: changing to directory ramaila/.casa/ipython failed.
Details:
[Errno 2] No such file or directory: 'ramaila/.casa/ipython'
Some configuration files may have incorrect line endings. This should not
cause any problems during execution.
INFO:STIMELA:Recipe executed successfully
INFO:STIMELA:Adding cab 'ramaila_cab/simms' to recipe. The container will be named 'make_empty_ms-139720043853456150154704179'
INFO:STIMELA:Adding cab 'ramaila_cab/simulator' to recipe. The container will be named 'simulate-139720043841552150154704226'
INFO:STIMELA:Adding cab 'ramaila_cab/wsclean' to recipe. The container will be named 'image_wsclean-139720043855712150154704262'
INFO:STIMELA:Adding cab 'ramaila_cab/casa_clean' to recipe. The container will be named 'image_casa_clean-139720043842280150154704311'
INFO:STIMELA:Adding cab 'ramaila_cab/casa_clean' to recipe. The container will be named 'image_casa_clean-139720043842280150154704355'
Traceback (most recent call last):
File "/home/ramaila/.local/bin/stimela", line 6, in <module>
exec(compile(open(__file__).read(), __file__, 'exec'))
File "/home/ramaila/gitPackages/Stimela/bin/stimela", line 13, in <module>
2017-08-07 08:09:06,511 - STIMELA - INFO - MS directory 'msdir' does not exist. Will create it
2017-08-07 08:09:06,512 - STIMELA - INFO - Config directory not be found. Will create ./stimela_parameter_files
2017-08-07 08:09:06,889 - STIMELA - INFO - ---------------------------------
2017-08-07 08:09:06,889 - STIMELA - INFO - Stimlela version 0.2.8
2017-08-07 08:09:06,889 - STIMELA - INFO - Sphesihle Makhathini <sphemakh@gmail.com>
2017-08-07 08:09:06,889 - STIMELA - INFO - Running: Noise simulation
2017-08-07 08:09:06,889 - STIMELA - INFO - ---------------------------------
PID 30291 has already been logged.
2017-08-07 08:09:07,273 - STIMELA - INFO - ---------------------------------
2017-08-07 08:09:07,273 - STIMELA - INFO - ---------------------------------
Loading
Sorry, something went wrong. Reload?
Sorry, we cannot display this file.
Sorry, this file is invalid so it cannot be displayed.
@Athanaseus
Athanaseus / aimfast.txt
Last active January 22, 2018 10:40
Testing the aimfast cab
running: docker start -a image_fidelity-140274872554624151661736262
/bin/sh: 1: /code/run.sh: Permission denied
2018-01-22 12:36:03,105 - STIMELA - INFO - Recipe execution failed while running job image_fidelity
INFO:STIMELA:Recipe execution failed while running job image_fidelity
2018-01-22 12:36:03,106 - STIMELA - INFO - Completed jobs : []
INFO:STIMELA:Completed jobs : []
2018-01-22 12:36:03,106 - STIMELA - INFO - Remaining jobs : []
INFO:STIMELA:Remaining jobs : []
2018-01-22 12:36:03,106 - STIMELA - INFO - Saving pipeline information in .last_aimfast.json
INFO:STIMELA:Saving pipeline information in .last_aimfast.json
`delcube:intconvmodelcube:1: Traceback (most recent call last):
File "/ddfvenv/local/lib/python2.7/site-packages/DDFacet/Other/AsyncProcessPool.py", line 806, in _dispatch_job
result = handler(*args, **kwargs)
File "/ddfvenv/local/lib/python2.7/site-packages/DDFacet/ToolsDir/ModFFTW.py", line 380, in _convolveSingleGaussianFFTW
Ain = shareddict[field_in][ch]
INFO:STIMELA:Running job image_casa_clean
2018-04-03 14:44:11,071 - STIMELA - INFO - STEP 3 :: image_casa_clean:: Image data
2018-04-03 14:44:11,071 - STIMELA - INFO - STEP 3 :: image_casa_clean:: Image data
2018-04-03 14:44:11,071 - STIMELA - INFO - STEP 3 :: image_casa_clean:: Image data
INFO:STIMELA:STEP 3 :: image_casa_clean:: Image data
INFO:root:Validating parameters... CAB = casa_clean
INFO:root:Parameters validated and saved. Parameter file is: stimela_parameter_files/image_casa_clean-139926979696096152275937446.json
2018-04-03 14:44:11,073 - STIMELA - INFO - Instantiating container [image_casa_clean-139926979696096152275937446]. The container ID is printed below.
2018-04-03 14:44:11,073 - STIMELA - INFO - Instantiating container [image_casa_clean-139926979696096152275937446]. The container ID is printed below.
2018-04-03 14:44:11,073 - STIMELA - INFO - Instantiating container [image_casa_clean-139926979696096152275937446]. The container ID is printed below.
Loading
Sorry, something went wrong. Reload?
Sorry, we cannot display this file.
Sorry, this file is invalid so it cannot be displayed.
Loading
Sorry, something went wrong. Reload?
Sorry, we cannot display this file.
Sorry, this file is invalid so it cannot be displayed.
@Athanaseus
Athanaseus / stimela_ragavi.py
Created October 10, 2018 08:22
Running ragavi via stimela
import stimela
INPUT = "input"
OUTPUT = "output"
MSDIR = "msdir"
PREFIX = "ragavi"
recipe = stimela.Recipe("Stimela simulation example", ms_dir=MSDIR)