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AustinRochford/bayes_param_survival_pymc3.ipynb

Last active November 1, 2021 10:46
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Bayesian Parametric Survival Analysis with PyMC3
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bayes_param_survival_pymc3.ipynb
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@peadarcoylezopa
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Hey Austin. I run into a bug on this around the \nu cens - TypeError: TensorType does not support boolean mask for indexing such as tensor[x==0]. Instead you can use non_zeros() such as tensor[(x == 0).nonzeros()].

Any suggestions. I tried doing n[(cens).nonzero()] but it leads to problems with alignment further on.

@AustinRochford
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@peadarcoylezopa what PyMC3 and Theano versions are you using?

@springcoil
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Hey Austin - the bug turned out to be fixed by a newer version of theano.

@AustinRochford
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Glad to hear it!

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