model.yaml

# model type and relative file path to the weights
type: keras
args:
  weights: model_files/model.h5

# information about the model. Rendered on kipoi.org
info:
  authors:
      - name: My Name
        github: myname
  name: MyKerasModel
  doc: >
    
    Description of the model shown on kipoi.org.

  cite_as: https://doi.org/x/y   # link to the paper, blog post, ...
  tags:  # under which category dos this model fall
    - DNA accessibility

# which dataloader to use by default (file path)
default_dataloader: .

# required pip and conda dependencies
dependencies:
  conda:
    - python>=3.5
    - h5py
    - bioconda::pyfaidx
  pip:
    - tensorflow<=1.4.1
    - keras==1.2.2
    - kipoiseq

# input and output array shapes
schema:
  inputs:
    shape: (600,4)  # batch axis is not specified
    doc: DNA sequence
    # (Note: The above example shows where the model requires a single array
    # lists of arrays or dictionary of arrays can be specified by using the yaml synthax)
    
  targets:
    shape: (150, )
    doc: Probability of 150 different binary classes
    column_labels:  # Associated names for the predictions
      - target_labels.txt