BjornFJohansson

<?xml version="1.0" encoding="UTF-8"?>
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 Copyright (C) 2011-2017 Alexis Bienvenue <paamc@passoire.fr>

 This file is part of Auto-Multiple-Choice

 Auto-Multiple-Choice is free software: you can redistribute it
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BjornFJohansson

#!/home/bjorn/miniforge3/envs/bjorn311/bin python3
# -*- coding: utf-8 -*-
# https://pdfstandalone.com/en/merge-pdf
import sys
from pathlib import Path
from borb.pdf.document.document import Document
from borb.pdf.pdf import PDF
from tqdm import tqdm

script, *cliarg = sys.argv

BjornFJohansson

BjornFJohansson

from pathlib import Path
import urllib
import re, os
from urllib.parse import urlparse
from string import punctuation
pages = sorted(Path('.').glob('*.md'))

# Sometimes wp creates pages with ~ (tilde). Rename these
tildepages = [p for p in pages if "~" in str(p)]
for tildepage in tildepages:

BjornFJohansson

BjornFJohansson

BjornFJohansson

# Flow Cytometry Standard file format --> csv
# https://stackoverflow.com/questions/70348405/how-to-convert-lmd-file-to-csv-flow-cytometry-data
# https://pypi.org/project/fcsparser/

"""
This script collects all files in the same directory as the script (or cwd) with 
the file ending "fcs". These files are assumed to be in the Flow Cytometry Standard file format 
anhd converted to CSV using pandas, and fcsparser. To install requirements:

pip install fcsparser pandas

BjornFJohansson

# Now, for an example with features, we’ll use a GenBank file. 
# Suppose you have a circular genome:

from pydna.genbank import genbank

record = genbank("NC_005816.1")

print(record.seq[:30])

# TGTAACGAACGGTGCAATAGTGATCCACAC

BjornFJohansson

People

:bowtie:	😄 :smile:	😆 :laughing:
😊 :blush:	😃 :smiley:	☺️ :relaxed:
😏 :smirk:	😍 :heart_eyes:	😘 :kissing_heart:
😚 :kissing_closed_eyes:	😳 :flushed:	😌 :relieved:
😆 :satisfied:	😁 :grin:	😉 :wink:
😜 :stuck_out_tongue_winking_eye:	😝 :stuck_out_tongue_closed_eyes:	😀 :grinning:
😗 :kissing:	😙 :kissing_smiling_eyes:	😛 :stuck_out_tongue:

BjornFJohansson