Seed file for macFas genome http://www.ncbi.nlm.nih.gov/assembly/GCF_000364345.1/

BSgenome.Mfascicularis.NCBI.Macaca_fascicularis_5.0-seed

# -*- mode:debian-control -*-
Package: BSgenome.Mfascicularis.NCBI.Macaca_fascicularis_5.0
Title: Full genome sequences for Macaca fascicularis (Macaca_fascicularis_5.0)
Description: Full genome sequences for Macaca fascicularis (Crab-eating Macaque aka Cynomolgus Monkey) as provided by NCBI (Macaca_fascicularis_5.0, 2013-06-12) and stored in Biostrings objects.
Version: 0.1
organism: Macaca fascicularis
species: Crab-eating macaque
provider: NCBI
provider_version: Macaca_fascicularis_5.0
release_date: 2013-06-12
release_name: Macaca_fascicularis_5.0
source_url: ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF_000364345.1_Macaca_fascicularis_5.0/
organism_biocview: Macaca_fascicularis
BSgenomeObjname: Mfascicularis
circ_seqs: "NC_012670.1"
mseqnames: character(0)
SrcDataFiles1: GCF_000364345.1_Macaca_fascicularis_5.0_genomic.fna.gz
        from ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF_000364345.1_Macaca_fascicularis_5.0
PkgExamples: genome[["NC_022272.1"]]
seqs_srcdir: /home/ryan/Projects/cyno-genome-TGI/BSgenome/seqs
seqfile_name: /home/ryan/Projects/cyno-genome-TGI/BSgenome/seqs/GCF_000364345.1_Macaca_fascicularis_5.0_genomic.2bit

error.log

> forgeBSgenomeDataPkg("/home/ryan/Projects/cyno-genome-TGI/BSgenome/BSgenome.Mfascicularis.NCBI.Macaca_fascicularis_5.0-seed")
Error in makeS4FromList("BSgenomeDataPkgSeed", x) : 
  some names in 'x' are not valid BSgenomeDataPkgSeed slots (seqfile_name)
> traceback()
7: stop("some names in 'x' are not valid ", Class, " slots (", paste(invalid_names, 
       collapse = ", "), ")")
6: makeS4FromList("BSgenomeDataPkgSeed", x)
5: BSgenomeDataPkgSeed(x)
4: forgeBSgenomeDataPkg(y, seqs_srcdir = seqs_srcdir, destdir = destdir, 
       mode = mode, verbose = verbose)
3: forgeBSgenomeDataPkg(y, seqs_srcdir = seqs_srcdir, destdir = destdir, 
       mode = mode, verbose = verbose)
2: forgeBSgenomeDataPkg("/home/ryan/Projects/cyno-genome-TGI/BSgenome/BSgenome.Mfascicularis.NCBI.Macaca_fascicularis_5.0-seed")
1: forgeBSgenomeDataPkg("/home/ryan/Projects/cyno-genome-TGI/BSgenome/BSgenome.Mfascicularis.NCBI.Macaca_fascicularis_5.0-seed")
> sessionInfo()
R version 3.1.0 (2014-04-10)
Platform: x86_64-unknown-linux-gnu (64-bit)

locale:
 [1] LC_CTYPE=en_US.UTF-8       LC_NUMERIC=C              
 [3] LC_TIME=en_US.UTF-8        LC_COLLATE=en_US.UTF-8    
 [5] LC_MONETARY=en_US.UTF-8    LC_MESSAGES=en_US.UTF-8   
 [7] LC_PAPER=en_US.UTF-8       LC_NAME=C                 
 [9] LC_ADDRESS=C               LC_TELEPHONE=C            
[11] LC_MEASUREMENT=en_US.UTF-8 LC_IDENTIFICATION=C       

attached base packages:
[1] grDevices datasets  parallel  graphics  stats     utils     methods  
[8] base     

other attached packages:
 [1] Biobase_2.24.0       BSgenome_1.32.0      Biostrings_2.32.1   
 [4] XVector_0.4.0        GenomicRanges_1.16.4 GenomeInfoDb_1.0.2  
 [7] foreach_1.4.2        plyr_1.8.1           stringr_0.6.2       
[10] ggplot2_1.0.0        IRanges_1.22.10      BiocGenerics_0.10.0 
[13] BiocInstaller_1.14.3

loaded via a namespace (and not attached):
 [1] bitops_1.0-6     codetools_0.2-9  colorspace_1.2-4 digest_0.6.8    
 [5] grid_3.1.0       gtable_0.1.2     iterators_1.0.7  MASS_7.3-37     
 [9] munsell_0.4.2    proto_0.3-10     Rcpp_0.11.3      reshape2_1.4.1  
[13] Rsamtools_1.16.1 scales_0.2.4     stats4_3.1.0     tools_3.1.0     
[17] zlibbioc_1.10.0