Skip to content

Instantly share code, notes, and snippets.

@Flamefire
Created May 16, 2024 17:09
Show Gist options
  • Save Flamefire/5b2591a313cfe0a7e0d1130dbb7eaf21 to your computer and use it in GitHub Desktop.
Save Flamefire/5b2591a313cfe0a7e0d1130dbb7eaf21 to your computer and use it in GitHub Desktop.
(partial) EasyBuild log for failed build of /home/s3248973/.local/EasyBuildDev/easybuild-easyconfigs/easybuild/easyconfigs/f/flex/flex-2.6.4-FCC-4.5.0.eb (PR(s) #20541)
== 2024-05-16 19:09:37,900 easyblock.py:313 INFO This is EasyBuild 4.9.2.dev0-re4524c1c70e496e5886de7d4848bb8147eea84bd (framework: 4.9.2.dev0-re4524c1c70e496e5886de7d4848bb8147eea84bd, easyblocks: 4.9.2.dev0-r743662d06caf460a9c3edd5e433ee37d5283f0a3) on host i7075.
== 2024-05-16 19:09:37,900 easyblock.py:319 INFO This is easyblock EB_flex from module easybuild.easyblocks.flex (/home/s3248973/.local/EasyBuildDev/easybuild-easyblocks/easybuild/easyblocks/f/flex.py)
== 2024-05-16 19:09:37,900 easyblock.py:1056 INFO Build dir set to /dev/shm/s3248973-EasyBuild1017611/flex/2.6.4/FCC-4.5.0
== 2024-05-16 19:09:37,900 easyblock.py:1113 INFO Software install dir set to /data/horse/ws/s3248973-EasyBuild/easybuild-rome/software/flex/2.6.4-FCC-4.5.0
== 2024-05-16 19:09:37,900 easyblock.py:1118 INFO Module install dir set to /data/horse/ws/s3248973-EasyBuild/easybuild-rome/modules/all
== 2024-05-16 19:09:37,900 easyblock.py:288 INFO Init completed for application name flex version 2.6.4
== 2024-05-16 19:09:37,900 easyblock.py:4234 INFO Obtained application instance of for flex (easyblock: None)
== 2024-05-16 19:09:37,901 easyconfig.py:1702 INFO Generating template values...
== 2024-05-16 19:09:37,901 easyconfig.py:1721 INFO Template values: arch='x86_64', bitbucket_account='flex', github_account='flex', module_name='flex/2.6.4-FCC-4.5.0', name='flex', nameletter='f', nameletterlower='f', namelower='flex', sysroot='', toolchain_name='FCC', toolchain_version='4.5.0', version='2.6.4', version_major='2', version_major_minor='2.6', version_minor='6', versionprefix='', versionsuffix=''
== 2024-05-16 19:09:37,901 one.py:180 INFO Skipping reformatting value for parameter 'toolchain'
== 2024-05-16 19:09:37,901 one.py:180 INFO Skipping reformatting value for parameter 'toolchainopts'
== 2024-05-16 19:09:37,902 filetools.py:1912 INFO Creating directory /tmp/easybuild-tmplog/reprod_20240516190937_663435 (parents: True, set_gid: False, sticky: False)
== 2024-05-16 19:09:37,902 easyblock.py:4488 INFO Dumped easyconfig instance to /tmp/easybuild-tmplog/reprod_20240516190937_663435/flex-2.6.4-FCC-4.5.0.eb
== 2024-05-16 19:09:37,902 filetools.py:1912 INFO Creating directory /tmp/easybuild-tmplog/reprod_20240516190937_663435/easyblocks (parents: True, set_gid: False, sticky: False)
== 2024-05-16 19:09:37,903 filetools.py:2425 INFO /home/s3248973/.local/EasyBuildDev/easybuild-easyblocks/easybuild/easyblocks/generic/configuremake.py copied to /tmp/easybuild-tmplog/reprod_20240516190937_663435/easyblocks/configuremake.py
== 2024-05-16 19:09:37,903 easyblock.py:4468 INFO Dumped easyblock configuremake.py required for reproduction to /tmp/easybuild-tmplog/reprod_20240516190937_663435/easyblocks
== 2024-05-16 19:09:37,904 filetools.py:2425 INFO /home/s3248973/.local/EasyBuildDev/easybuild-easyblocks/easybuild/easyblocks/f/flex.py copied to /tmp/easybuild-tmplog/reprod_20240516190937_663435/easyblocks/flex.py
== 2024-05-16 19:09:37,904 easyblock.py:4468 INFO Dumped easyblock flex.py required for reproduction to /tmp/easybuild-tmplog/reprod_20240516190937_663435/easyblocks
== 2024-05-16 19:09:37,905 filetools.py:1912 INFO Creating directory /tmp/easybuild-tmplog/reprod_20240516190937_663435/hooks (parents: True, set_gid: False, sticky: False)
== 2024-05-16 19:09:37,905 filetools.py:2425 INFO /home/s3248973/.local/EasyBuildDev/hooks.py copied to /tmp/easybuild-tmplog/reprod_20240516190937_663435/hooks/hooks.py
== 2024-05-16 19:09:37,905 easyblock.py:4500 INFO Dumped hooks file /home/s3248973/.local/EasyBuildDev/hooks.py which is (potentially) required for reproduction to /tmp/easybuild-tmplog/reprod_20240516190937_663435/hooks/hooks.py
== 2024-05-16 19:09:37,906 easyblock.py:2239 INFO Number of iterations to perform for central part of installation procedure: 1
== 2024-05-16 19:09:37,906 build_log.py:267 INFO building and installing flex/2.6.4-FCC-4.5.0...
== 2024-05-16 19:09:37,908 filetools.py:2005 INFO Lock /data/horse/ws/s3248973-EasyBuild/easybuild-rome/software/.locks/_data_horse_ws_s3248973-EasyBuild_easybuild-rome_software_flex_2.6.4-FCC-4.5.0.lock does not exist
== 2024-05-16 19:09:37,909 filetools.py:1946 INFO Creating lock at /data/horse/ws/s3248973-EasyBuild/easybuild-rome/software/.locks/_data_horse_ws_s3248973-EasyBuild_easybuild-rome_software_flex_2.6.4-FCC-4.5.0.lock...
== 2024-05-16 19:09:37,909 filetools.py:1912 INFO Creating directory /data/horse/ws/s3248973-EasyBuild/easybuild-rome/software/.locks/_data_horse_ws_s3248973-EasyBuild_easybuild-rome_software_flex_2.6.4-FCC-4.5.0.lock (parents: True, set_gid: False, sticky: False)
== 2024-05-16 19:09:37,912 filetools.py:1955 INFO Lock created: /data/horse/ws/s3248973-EasyBuild/easybuild-rome/software/.locks/_data_horse_ws_s3248973-EasyBuild_easybuild-rome_software_flex_2.6.4-FCC-4.5.0.lock
== 2024-05-16 19:09:37,912 build_log.py:267 INFO fetching files...
== 2024-05-16 19:09:37,914 easyblock.py:3956 INFO Starting fetch step
== 2024-05-16 19:09:37,914 easyconfig.py:1702 INFO Generating template values...
== 2024-05-16 19:09:37,914 easyconfig.py:1721 INFO Template values: arch='x86_64', bitbucket_account='flex', builddir='/dev/shm/s3248973-EasyBuild1017611/flex/2.6.4/FCC-4.5.0', github_account='flex', installdir='/data/horse/ws/s3248973-EasyBuild/easybuild-rome/software/flex/2.6.4-FCC-4.5.0', module_name='flex/2.6.4-FCC-4.5.0', name='flex', nameletter='f', nameletterlower='f', namelower='flex', start_dir='None', sysroot='', toolchain_name='FCC', toolchain_version='4.5.0', version='2.6.4', version_major='2', version_major_minor='2.6', version_minor='6', versionprefix='', versionsuffix=''
== 2024-05-16 19:09:37,914 easyblock.py:3964 INFO Running method fetch_step part of step fetch
== 2024-05-16 19:09:37,915 easyblock.py:2361 WARNING Easyconfig does not specify an EasyBuild-version (key 'easybuild_version')! Assuming the latest version
== 2024-05-16 19:09:37,915 easyblock.py:809 INFO Considering directory in which easyconfig file is located when searching for flex-2.6.4.tar.gz: /home/s3248973/.local/EasyBuildDev/easybuild-easyconfigs/easybuild/easyconfigs/f/flex
== 2024-05-16 19:09:37,915 tools.py:274 INFO Found location to 'eb' script via $EB_SCRIPT_PATH: /home/s3248973/.local/EasyBuildDev/easybuild-framework/eb
== 2024-05-16 19:09:37,915 tools.py:290 INFO Not considering /home/s3248973/.local/EasyBuildDev (no easybuild/easyconfigs subdir found)
== 2024-05-16 19:09:37,915 tools.py:298 INFO Also considering installation prefix /home/h3/s3248973/.local/EasyBuildDev (via resolved path to 'eb')...
== 2024-05-16 19:09:37,959 easyblock.py:851 INFO Found file flex-2.6.4.tar.gz at /data/horse/ws/s3248973-EasyBuild/sources/f/flex/flex-2.6.4.tar.gz
== 2024-05-16 19:09:37,960 easyblock.py:496 INFO Added sources: [{'name': 'flex-2.6.4.tar.gz', 'path': '/data/horse/ws/s3248973-EasyBuild/sources/f/flex/flex-2.6.4.tar.gz', 'cmd': None, 'checksum': 'e87aae032bf07c26f85ac0ed3250998c37621d95f8bd748b31f15b33c45ee995', 'finalpath': '/dev/shm/s3248973-EasyBuild1017611/flex/2.6.4/FCC-4.5.0'}]
== 2024-05-16 19:09:37,960 easyblock.py:2404 INFO no patches provided
== 2024-05-16 19:09:37,989 easyblock.py:2414 INFO md5 checksum for /data/horse/ws/s3248973-EasyBuild/sources/f/flex/flex-2.6.4.tar.gz: 2882e3179748cc9f9c23ec593d6adc8d
== 2024-05-16 19:09:37,990 easyblock.py:2414 INFO sha256 checksum for /data/horse/ws/s3248973-EasyBuild/sources/f/flex/flex-2.6.4.tar.gz: e87aae032bf07c26f85ac0ed3250998c37621d95f8bd748b31f15b33c45ee995
== 2024-05-16 19:09:37,990 easyblock.py:2449 INFO Checking dirs that need to be created: ['/data/horse/ws/s3248973-EasyBuild/easybuild-rome/software/flex/2.6.4-FCC-4.5.0', '/data/horse/ws/s3248973-EasyBuild/easybuild-rome/modules/all/flex', '/data/horse/ws/s3248973-EasyBuild/easybuild-rome/modules/lang/flex']
== 2024-05-16 19:09:37,991 filetools.py:1912 INFO Creating directory /data/horse/ws/s3248973-EasyBuild/easybuild-rome/software/flex/2.6.4-FCC-4.5.0 (parents: True, set_gid: False, sticky: False)
== 2024-05-16 19:09:37,998 configuremake.py:96 INFO config.guess version: 2018-08-29 (last updated: 2024-04-12T13:21:06, SHA256 checksum: c02eb9cc55c86cfd1e9a794e548d25db5c9539e7b2154beb649bc6e2cbffc74c)
== 2024-05-16 19:09:37,998 configuremake.py:152 INFO Found config.guess at /data/horse/ws/s3248973-EasyBuild/sources/generic/eb_v4.9.2.dev0/ConfigureMake/config.guess
== 2024-05-16 19:09:37,998 build_log.py:267 INFO creating build dir, resetting environment...
== 2024-05-16 19:09:38,000 easyblock.py:3956 INFO Starting ready step
== 2024-05-16 19:09:38,000 easyconfig.py:1702 INFO Generating template values...
== 2024-05-16 19:09:38,001 easyconfig.py:1721 INFO Template values: arch='x86_64', bitbucket_account='flex', builddir='/dev/shm/s3248973-EasyBuild1017611/flex/2.6.4/FCC-4.5.0', github_account='flex', installdir='/data/horse/ws/s3248973-EasyBuild/easybuild-rome/software/flex/2.6.4-FCC-4.5.0', module_name='flex/2.6.4-FCC-4.5.0', name='flex', nameletter='f', nameletterlower='f', namelower='flex', start_dir='None', sysroot='', toolchain_name='FCC', toolchain_version='4.5.0', version='2.6.4', version_major='2', version_major_minor='2.6', version_minor='6', versionprefix='', versionsuffix=''
== 2024-05-16 19:09:38,001 easyblock.py:3964 INFO Running method check_readiness_step part of step ready
== 2024-05-16 19:09:38,001 easyblock.py:2258 INFO Setting parallelism: 256
== 2024-05-16 19:09:38,092 easyblock.py:2310 WARNING Loaded modules detected: ['release/23.10', 'EasyBuild-develop']
== 2024-05-16 19:09:38,092 easyblock.py:3964 INFO Running method make_builddir part of step ready
== 2024-05-16 19:09:38,093 filetools.py:1912 INFO Creating directory /dev/shm/s3248973-EasyBuild1017611/flex/2.6.4/FCC-4.5.0 (parents: True, set_gid: False, sticky: False)
== 2024-05-16 19:09:38,093 easyblock.py:3964 INFO Running method reset_env part of step ready
== 2024-05-16 19:09:38,093 easyblock.py:3964 INFO Running method handle_iterate_opts part of step ready
== 2024-05-16 19:09:38,093 easyconfig.py:1702 INFO Generating template values...
== 2024-05-16 19:09:38,093 easyconfig.py:1721 INFO Template values: arch='x86_64', bitbucket_account='flex', builddir='/dev/shm/s3248973-EasyBuild1017611/flex/2.6.4/FCC-4.5.0', github_account='flex', installdir='/data/horse/ws/s3248973-EasyBuild/easybuild-rome/software/flex/2.6.4-FCC-4.5.0', module_name='flex/2.6.4-FCC-4.5.0', name='flex', nameletter='f', nameletterlower='f', namelower='flex', parallel='256', start_dir='None', sysroot='', toolchain_name='FCC', toolchain_version='4.5.0', version='2.6.4', version_major='2', version_major_minor='2.6', version_minor='6', versionprefix='', versionsuffix=''
== 2024-05-16 19:09:38,093 build_log.py:267 INFO unpacking...
== 2024-05-16 19:09:38,096 easyblock.py:3956 INFO Starting source step
== 2024-05-16 19:09:38,096 easyconfig.py:1702 INFO Generating template values...
== 2024-05-16 19:09:38,097 easyconfig.py:1721 INFO Template values: arch='x86_64', bitbucket_account='flex', builddir='/dev/shm/s3248973-EasyBuild1017611/flex/2.6.4/FCC-4.5.0', github_account='flex', installdir='/data/horse/ws/s3248973-EasyBuild/easybuild-rome/software/flex/2.6.4-FCC-4.5.0', module_name='flex/2.6.4-FCC-4.5.0', name='flex', nameletter='f', nameletterlower='f', namelower='flex', parallel='256', start_dir='None', sysroot='', toolchain_name='FCC', toolchain_version='4.5.0', version='2.6.4', version_major='2', version_major_minor='2.6', version_minor='6', versionprefix='', versionsuffix=''
== 2024-05-16 19:09:38,097 easyblock.py:3964 INFO Running method checksum_step part of step source
== 2024-05-16 19:09:38,099 easyblock.py:2467 INFO Checksum verification for /data/horse/ws/s3248973-EasyBuild/sources/f/flex/flex-2.6.4.tar.gz using e87aae032bf07c26f85ac0ed3250998c37621d95f8bd748b31f15b33c45ee995 passed.
== 2024-05-16 19:09:38,099 easyblock.py:3964 INFO Running method extract_step part of step source
== 2024-05-16 19:09:38,099 easyblock.py:2579 INFO Unpacking source flex-2.6.4.tar.gz
== 2024-05-16 19:09:38,099 run.py:247 INFO running cmd: tar xzf /data/horse/ws/s3248973-EasyBuild/sources/f/flex/flex-2.6.4.tar.gz
== 2024-05-16 19:09:38,143 build_log.py:267 INFO patching...
== 2024-05-16 19:09:38,146 easyblock.py:3956 INFO Starting patch step
== 2024-05-16 19:09:38,147 easyconfig.py:1702 INFO Generating template values...
== 2024-05-16 19:09:38,147 easyconfig.py:1721 INFO Template values: arch='x86_64', bitbucket_account='flex', builddir='/dev/shm/s3248973-EasyBuild1017611/flex/2.6.4/FCC-4.5.0', github_account='flex', installdir='/data/horse/ws/s3248973-EasyBuild/easybuild-rome/software/flex/2.6.4-FCC-4.5.0', module_name='flex/2.6.4-FCC-4.5.0', name='flex', nameletter='f', nameletterlower='f', namelower='flex', parallel='256', start_dir='None', sysroot='', toolchain_name='FCC', toolchain_version='4.5.0', version='2.6.4', version_major='2', version_major_minor='2.6', version_minor='6', versionprefix='', versionsuffix=''
== 2024-05-16 19:09:38,147 easyblock.py:3964 INFO Running method patch_step part of step patch
== 2024-05-16 19:09:38,147 build_log.py:267 INFO preparing...
== 2024-05-16 19:09:38,149 easyblock.py:3956 INFO Starting prepare step
== 2024-05-16 19:09:38,149 easyconfig.py:1702 INFO Generating template values...
== 2024-05-16 19:09:38,149 easyconfig.py:1721 INFO Template values: arch='x86_64', bitbucket_account='flex', builddir='/dev/shm/s3248973-EasyBuild1017611/flex/2.6.4/FCC-4.5.0', github_account='flex', installdir='/data/horse/ws/s3248973-EasyBuild/easybuild-rome/software/flex/2.6.4-FCC-4.5.0', module_name='flex/2.6.4-FCC-4.5.0', name='flex', nameletter='f', nameletterlower='f', namelower='flex', parallel='256', start_dir='None', sysroot='', toolchain_name='FCC', toolchain_version='4.5.0', version='2.6.4', version_major='2', version_major_minor='2.6', version_minor='6', versionprefix='', versionsuffix=''
== 2024-05-16 19:09:38,149 easyblock.py:3964 INFO Running method prepare_step part of step prepare
== 2024-05-16 19:09:38,150 modules.py:626 INFO Checking whether Bison/3.7.6-FCC-4.5.0 exists...
== 2024-05-16 19:09:38,150 modules.py:633 INFO Module Bison/3.7.6-FCC-4.5.0 not found in list of available modules, checking via 'module show'...
== 2024-05-16 19:09:38,477 modules.py:647 INFO Module Bison/3.7.6-FCC-4.5.0 not found via module avail/show, checking whether it is a wrapper
== 2024-05-16 19:09:38,478 modules.py:654 INFO Result for existence check of Bison/3.7.6-FCC-4.5.0 module: False
== 2024-05-16 19:09:38,478 modules.py:626 INFO Checking whether help2man/1.48.3-FCC-4.5.0 exists...
== 2024-05-16 19:09:38,478 modules.py:633 INFO Module help2man/1.48.3-FCC-4.5.0 not found in list of available modules, checking via 'module show'...
== 2024-05-16 19:09:38,800 modules.py:647 INFO Module help2man/1.48.3-FCC-4.5.0 not found via module avail/show, checking whether it is a wrapper
== 2024-05-16 19:09:38,801 modules.py:654 INFO Result for existence check of help2man/1.48.3-FCC-4.5.0 module: False
== 2024-05-16 19:09:38,801 modules.py:626 INFO Checking whether M4/1.4.18-FCC-4.5.0 exists...
== 2024-05-16 19:09:38,801 modules.py:633 INFO Module M4/1.4.18-FCC-4.5.0 not found in list of available modules, checking via 'module show'...
== 2024-05-16 19:09:38,801 modules.py:647 INFO Module M4/1.4.18-FCC-4.5.0 not found via module avail/show, checking whether it is a wrapper
== 2024-05-16 19:09:38,801 modules.py:654 INFO Result for existence check of M4/1.4.18-FCC-4.5.0 module: False
== 2024-05-16 19:09:38,802 build_log.py:171 ERROR EasyBuild crashed with an error (at easybuild/base/exceptions.py:126 in __init__): Missing modules for dependencies (use --robot?): Bison/3.7.6-FCC-4.5.0, help2man/1.48.3-FCC-4.5.0, M4/1.4.18-FCC-4.5.0 (at easybuild/tools/toolchain/toolchain.py:563 in _check_dependencies)
== 2024-05-16 19:09:38,803 filetools.py:2013 INFO Removing lock /data/horse/ws/s3248973-EasyBuild/easybuild-rome/software/.locks/_data_horse_ws_s3248973-EasyBuild_easybuild-rome_software_flex_2.6.4-FCC-4.5.0.lock...
== 2024-05-16 19:09:38,812 filetools.py:383 INFO Path /data/horse/ws/s3248973-EasyBuild/easybuild-rome/software/.locks/_data_horse_ws_s3248973-EasyBuild_easybuild-rome_software_flex_2.6.4-FCC-4.5.0.lock successfully removed.
== 2024-05-16 19:09:38,812 filetools.py:2017 INFO Lock removed: /data/horse/ws/s3248973-EasyBuild/easybuild-rome/software/.locks/_data_horse_ws_s3248973-EasyBuild_easybuild-rome_software_flex_2.6.4-FCC-4.5.0.lock
== 2024-05-16 19:09:38,812 easyblock.py:4291 WARNING build failed (first 300 chars): Missing modules for dependencies (use --robot?): Bison/3.7.6-FCC-4.5.0, help2man/1.48.3-FCC-4.5.0, M4/1.4.18-FCC-4.5.0
== 2024-05-16 19:09:38,812 easyblock.py:328 INFO Closing log for application name flex version 2.6.4
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment