Created
October 8, 2014 01:03
-
-
Save Kojirion/a4f5b4f1e7350f88e9f0 to your computer and use it in GitHub Desktop.
Testing a cholesky factorisation C program through a python script
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
import subprocess | |
import pickle | |
SetupTime = [] | |
FactorisationTime = [] | |
TotalTime = [] | |
ApproximateSolution = [] | |
TrueSolution = 0.199268 # hardcoded | |
AbsoluteError = [] | |
m_list = [m for m in range(4, 62, 2)] # m >= 4, m even | |
for m in m_list: | |
raw_output = subprocess.check_output('./laplace_cholesky_double', input=bytes(str(m), 'ascii')) | |
processed_output = raw_output.decode().split('\n') | |
SetupTime.append(processed_output[1].split()[-1]) | |
FactorisationTime.append(processed_output[2].split()[-1]) | |
TotalTime.append(processed_output[3].split()[-1]) | |
ApproximateSolution.append(processed_output[4].split()[-1]) | |
AbsoluteError.append(processed_output[6].split()[-1]) | |
file = open("cholesky_data", "wb") | |
pickle.dump(m_list, file) | |
pickle.dump(SetupTime, file) | |
pickle.dump(FactorisationTime, file) | |
pickle.dump(TotalTime, file) | |
pickle.dump(ApproximateSolution, file) | |
pickle.dump(AbsoluteError, file) | |
file.close() |
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
import pickle | |
from matplotlib import pyplot | |
from matplotlib.legend_handler import HandlerLine2D | |
file = open("cholesky_data", "rb") | |
m_list = pickle.load(file) | |
SetupTime = pickle.load(file) | |
FactorisationTime = pickle.load(file) | |
TotalTime = pickle.load(file) | |
ApproximateSolution = pickle.load(file) | |
TrueSolution = 0.199268 # hardcoded | |
AbsoluteError = pickle.load(file) | |
file.close() | |
file = open("cholesky_banded_data", "rb") | |
bm_list = pickle.load(file) | |
bSetupTime = pickle.load(file) | |
bFactorisationTime = pickle.load(file) | |
bTotalTime = pickle.load(file) | |
bApproximateSolution = pickle.load(file) | |
bTrueSolution = 0.199268 # hardcoded | |
bAbsoluteError = pickle.load(file) | |
file.close() | |
O_n3 = [pow(i, 2) for i in m_list] | |
true_solution = [TrueSolution for i in bm_list] | |
pyplot.plot(m_list, FactorisationTime) | |
pyplot.plot(bm_list, bFactorisationTime) | |
pyplot.ylabel('Factorisation time') | |
# line1, = pyplot.plot(m_list, ApproximateSolution, label='Non-banded Approximate solution') | |
# pyplot.plot(bm_list, bApproximateSolution, label='Banded Approximate solution') | |
# pyplot.plot(bm_list, true_solution, label='True solution') | |
# pyplot.legend(handler_map={line1: HandlerLine2D(numpoints=4)}) | |
pyplot.xlabel('m') | |
pyplot.show() |
Sign up for free
to join this conversation on GitHub.
Already have an account?
Sign in to comment