Marian Schneider MSchnei

## psychopy_measure_luminance.py
# -*- coding: utf-8 -*-
"""
Psychopy script to present and measure luminance levels (with a light meter).
Press buttons 1 and 2 to move from darker to brighter, or vice verser.
"""

from psychopy import visual, monitors, core, event
import numpy as np

# %%

## itk2fsl_trf.md

      
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                MSchnei
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                Convert itk transformation matrix to fsl compatible one
              
          
    Convert itk transformation matrix to fsl compatible one

Sometimes FSL tools do not immediately find a satisfactory transformation
to bring two images in register. In that case, you can give the flirt algorithm
a little nudge by (1.) bringing the two images roughly in the same space using
itk snap's automatic and manual registration tools and only then (2.) running
FSL flirt or epi_reg.
Since itksnap and FSL use different origins for their coordinate systems
the transformation matrices that are produced by the two programs are not

  
## shiftVolByVoxel.py
# -*- coding: utf-8 -*-
"""
Created on Thu Mar 30 11:55:27 2017

@author: marian
"""
import os
import numpy as np
from nibabel import load, save, Nifti1Image
	# -- coding: utf-8 --
	"""
	Psychopy script to present and measure luminance levels (with a light meter).
	Press buttons 1 and 2 to move from darker to brighter, or vice verser.
	"""

	from psychopy import visual, monitors, core, event
	import numpy as np

	# %%
	# -- coding: utf-8 --
	"""
	Created on Thu Mar 30 11:55:27 2017

	@author: marian
	"""
	import os
	import numpy as np
	from nibabel import load, save, Nifti1Image