slurm stuff

slurm.txt

function sacctRun() {
    sacct --format="user,jobid,jobname,node,state,ExitCode,start,end,maxrss" \
        | grep -v "COMPLETE\|FAIL\|CANCEL\|OUT_OF_ME" \
        | awk '$2 != "batch" && $2 != "extern" {print}'
}

get_maint_time () {
    maint_start=$(scontrol show -u root reservation \
                | perl -pe 's/\n/#/g' \
                | perl -pe 's/#ReservationName=/\n/g' \
                | grep MAINT \
                | perl -ne '/.+StartTime=(.+)\sEndTime/; print $1;')
    difftime=$(($(date +%s -d "$maint_start") - $(date +%s) - 1000))
    req_len=$(date -d "@$difftime" "+$(($difftime/86400))-%H:%M:%S")
    echo $req_len
}
alias salloc_l='salloc --time=$(get_maint_time)'
alias srun_l='srun --time=$(get_maint_time)'

scontrol update jobid=4350738,4350740 partition=himem,general