Created
October 5, 2023 02:11
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my test log of taxprofiler/taxprofiler
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| [7f/f642cb] Submitted process > NFCORE_TAXPROFILER:TAXPROFILER:DB_CHECK:UNTAR (test-db-ganon.tar.gz) | |
| [a2/c3dccb] Submitted process > NFCORE_TAXPROFILER:TAXPROFILER:INPUT_CHECK:SAMPLESHEET_CHECK (samplesheet.csv) | |
| [f5/f3abe6] Submitted process > NFCORE_TAXPROFILER:TAXPROFILER:SHORTREAD_HOSTREMOVAL:BOWTIE2_BUILD (genome.fasta) | |
| [46/232b02] Submitted process > NFCORE_TAXPROFILER:TAXPROFILER:DB_CHECK:UNTAR (test-db-centrifuge.tar.gz) | |
| [e7/c10e2f] Submitted process > NFCORE_TAXPROFILER:TAXPROFILER:DB_CHECK:UNTAR (metaphlan_database.tar.gz) | |
| [75/06f0ba] Submitted process > NFCORE_TAXPROFILER:TAXPROFILER:DB_CHECK:UNTAR (testdb-kraken2.tar.gz) | |
| [e2/c62873] Submitted process > NFCORE_TAXPROFILER:TAXPROFILER:DB_CHECK:UNTAR (test-db-kmcp.tar.gz) | |
| [57/232ab0] Submitted process > NFCORE_TAXPROFILER:TAXPROFILER:DB_CHECK:UNTAR (metaphlan4_database.tar.gz) | |
| [8e/4f267f] Submitted process > NFCORE_TAXPROFILER:TAXPROFILER:DB_CHECK:UNTAR (kaiju.tar.gz) | |
| [27/a343eb] Submitted process > NFCORE_TAXPROFILER:TAXPROFILER:LONGREAD_HOSTREMOVAL:MINIMAP2_INDEX | |
| [a4/e00779] Submitted process > NFCORE_TAXPROFILER:TAXPROFILER:DB_CHECK:UNTAR (testdb-bracken.tar.gz) | |
| [76/4ce9aa] Submitted process > NFCORE_TAXPROFILER:TAXPROFILER:LONGREAD_PREPROCESSING:PORECHOP_PORECHOP (ERR3201952) | |
| [80/535555] Submitted process > NFCORE_TAXPROFILER:TAXPROFILER:FASTQC (ERR3201952) | |
| [a7/5d340c] Submitted process > NFCORE_TAXPROFILER:TAXPROFILER:PROFILING:DIAMOND_BLASTX (db1|2611_se) | |
| [2c/bcf4b2] Submitted process > NFCORE_TAXPROFILER:TAXPROFILER:FASTQC (2612) | |
| [36/85083f] Submitted process > NFCORE_TAXPROFILER:TAXPROFILER:FASTQC (2612) | |
| [f1/b40ca8] Submitted process > NFCORE_TAXPROFILER:TAXPROFILER:FASTQC (2612) | |
| [a3/ae7c51] Submitted process > NFCORE_TAXPROFILER:TAXPROFILER:SHORTREAD_PREPROCESSING:SHORTREAD_FASTP:FASTP_PAIRED (2612) | |
| [a1/8e965b] Submitted process > NFCORE_TAXPROFILER:TAXPROFILER:FASTQC (2613) | |
| [eb/8dcdf5] Submitted process > NFCORE_TAXPROFILER:TAXPROFILER:SHORTREAD_PREPROCESSING:SHORTREAD_FASTP:FASTP_SINGLE (2612) | |
| [e5/85bd94] Submitted process > NFCORE_TAXPROFILER:TAXPROFILER:SHORTREAD_PREPROCESSING:SHORTREAD_FASTP:FASTP_PAIRED (2612) | |
| [62/cf898c] Submitted process > NFCORE_TAXPROFILER:TAXPROFILER:SHORTREAD_PREPROCESSING:SHORTREAD_FASTP:FASTP_PAIRED (2613) | |
| [9c/879ebc] Submitted process > NFCORE_TAXPROFILER:TAXPROFILER:PROFILING:GANON_CLASSIFY (db1|2611_se) | |
| [6f/7a3e8c] Submitted process > NFCORE_TAXPROFILER:TAXPROFILER:PROFILING:KAIJU_KAIJU (db5|2611_se) | |
| [b5/2013eb] Submitted process > NFCORE_TAXPROFILER:TAXPROFILER:PROFILING:METAPHLAN_METAPHLAN (metaphlan3|2611_se) | |
| [e0/2831ac] Submitted process > NFCORE_TAXPROFILER:TAXPROFILER:PROFILING:GANON_REPORT (db1|2611_se) | |
| [b8/3709e4] Submitted process > NFCORE_TAXPROFILER:TAXPROFILER:PROFILING:KMCP_SEARCH (db1|2611_se) | |
| [59/76e979] Submitted process > NFCORE_TAXPROFILER:TAXPROFILER:PROFILING:KRAKEN2_KRAKEN2 (db1|bracken|2611_se) | |
| WARN: [nf-core/taxprofiler] Centrifuge currently does not accept FASTA files as input. Skipping Centrifuge for sample 2611_se. | |
| [16/6354be] Submitted process > NFCORE_TAXPROFILER:TAXPROFILER:PROFILING:METAPHLAN_METAPHLAN (metaphlan4|2611_se) | |
| [88/1ba463] Submitted process > NFCORE_TAXPROFILER:TAXPROFILER:PROFILING:KRAKEN2_KRAKEN2 (db2|kraken2|2611_se) | |
| [a5/044c15] Submitted process > NFCORE_TAXPROFILER:TAXPROFILER:PROFILING:KMCP_PROFILE (db1|2611_se) | |
| [a7/598a8b] Submitted process > NFCORE_TAXPROFILER:TAXPROFILER:VISUALIZATION_KRONA:KRAKENTOOLS_KREPORT2KRONA (2611_se) | |
| [23/4207bf] Submitted process > NFCORE_TAXPROFILER:TAXPROFILER:PROFILING:BRACKEN_BRACKEN (db1|2611_se) | |
| [03/355772] Submitted process > NFCORE_TAXPROFILER:TAXPROFILER:VISUALIZATION_KRONA:KRONA_CLEANUP (2611_se) | |
| [7f/c521a2] Submitted process > NFCORE_TAXPROFILER:TAXPROFILER:VISUALIZATION_KRONA:KRAKENTOOLS_KREPORT2KRONA (2611_se) | |
| [87/b3770c] Submitted process > NFCORE_TAXPROFILER:TAXPROFILER:VISUALIZATION_KRONA:KRONA_CLEANUP (2611_se) | |
| [80/15cf2e] Submitted process > NFCORE_TAXPROFILER:TAXPROFILER:SHORTREAD_PREPROCESSING:FASTQC_PROCESSED (2612) | |
| [97/f535c0] Submitted process > NFCORE_TAXPROFILER:TAXPROFILER:SHORTREAD_COMPLEXITYFILTERING:BBMAP_BBDUK (2612) | |
| [41/371309] Submitted process > NFCORE_TAXPROFILER:TAXPROFILER:SHORTREAD_HOSTREMOVAL:BOWTIE2_ALIGN (2612) | |
| [15/b93393] Submitted process > NFCORE_TAXPROFILER:TAXPROFILER:SHORTREAD_COMPLEXITYFILTERING:BBMAP_BBDUK (2612) | |
| [0e/83f643] Submitted process > NFCORE_TAXPROFILER:TAXPROFILER:SHORTREAD_PREPROCESSING:FASTQC_PROCESSED (2612) | |
| [5e/c0f2d0] Submitted process > NFCORE_TAXPROFILER:TAXPROFILER:SHORTREAD_PREPROCESSING:FASTQC_PROCESSED (2613) | |
| [4c/36491d] Submitted process > NFCORE_TAXPROFILER:TAXPROFILER:SHORTREAD_COMPLEXITYFILTERING:BBMAP_BBDUK (2613) | |
| [db/70bf86] Submitted process > NFCORE_TAXPROFILER:TAXPROFILER:SHORTREAD_COMPLEXITYFILTERING:BBMAP_BBDUK (2612) | |
| [25/271c17] Submitted process > NFCORE_TAXPROFILER:TAXPROFILER:SHORTREAD_PREPROCESSING:FASTQC_PROCESSED (2612) | |
| [52/b4e9e8] Submitted process > NFCORE_TAXPROFILER:TAXPROFILER:SHORTREAD_HOSTREMOVAL:BOWTIE2_ALIGN (2613) | |
| [fa/ad016d] Submitted process > NFCORE_TAXPROFILER:TAXPROFILER:SHORTREAD_HOSTREMOVAL:BOWTIE2_ALIGN (2612) | |
| [8d/3b8463] Submitted process > NFCORE_TAXPROFILER:TAXPROFILER:SHORTREAD_HOSTREMOVAL:BOWTIE2_ALIGN (2612) | |
| [79/d23c56] Submitted process > NFCORE_TAXPROFILER:TAXPROFILER:PROFILING:KAIJU_KAIJU2TABLE_SINGLE (db5|2611_se) | |
| [cb/a19a14] Submitted process > NFCORE_TAXPROFILER:TAXPROFILER:VISUALIZATION_KRONA:KAIJU_KAIJU2KRONA (db5|2611_se) | |
| [98/5b4295] Submitted process > NFCORE_TAXPROFILER:TAXPROFILER:VISUALIZATION_KRONA:KRONA_CLEANUP (2611_se) | |
| [49/542712] Submitted process > NFCORE_TAXPROFILER:TAXPROFILER:SHORTREAD_HOSTREMOVAL:SAMTOOLS_INDEX (2612) | |
| [87/bc84c7] Submitted process > NFCORE_TAXPROFILER:TAXPROFILER:SHORTREAD_HOSTREMOVAL:SAMTOOLS_STATS (2612) | |
| [db/41ae3e] Submitted process > NFCORE_TAXPROFILER:TAXPROFILER:SHORTREAD_HOSTREMOVAL:SAMTOOLS_INDEX (2613) | |
| [d3/0f3434] Submitted process > NFCORE_TAXPROFILER:TAXPROFILER:SHORTREAD_HOSTREMOVAL:SAMTOOLS_STATS (2613) | |
| [19/3da37e] Submitted process > NFCORE_TAXPROFILER:TAXPROFILER:SHORTREAD_HOSTREMOVAL:SAMTOOLS_INDEX (2612) | |
| [63/79e5a4] Submitted process > NFCORE_TAXPROFILER:TAXPROFILER:SHORTREAD_HOSTREMOVAL:SAMTOOLS_INDEX (2612) | |
| [8c/88cabb] Submitted process > NFCORE_TAXPROFILER:TAXPROFILER:SHORTREAD_HOSTREMOVAL:SAMTOOLS_STATS (2612) | |
| [14/42729f] Submitted process > NFCORE_TAXPROFILER:TAXPROFILER:SHORTREAD_HOSTREMOVAL:SAMTOOLS_STATS (2612) | |
| [03/e95d58] Submitted process > NFCORE_TAXPROFILER:TAXPROFILER:LONGREAD_PREPROCESSING:FILTLONG (ERR3201952) | |
| [5b/3f1d72] Submitted process > NFCORE_TAXPROFILER:TAXPROFILER:LONGREAD_HOSTREMOVAL:MINIMAP2_ALIGN (ERR3201952) | |
| [92/c15613] Submitted process > NFCORE_TAXPROFILER:TAXPROFILER:LONGREAD_PREPROCESSING:FASTQC_PROCESSED (ERR3201952) | |
| [fc/61c725] Submitted process > NFCORE_TAXPROFILER:TAXPROFILER:LONGREAD_HOSTREMOVAL:SAMTOOLS_INDEX (ERR3201952) | |
| [5d/70ddf4] Submitted process > NFCORE_TAXPROFILER:TAXPROFILER:LONGREAD_HOSTREMOVAL:SAMTOOLS_VIEW (ERR3201952) | |
| [bc/32ebf1] Submitted process > NFCORE_TAXPROFILER:TAXPROFILER:LONGREAD_HOSTREMOVAL:SAMTOOLS_STATS (ERR3201952) | |
| [b0/dc188a] Submitted process > NFCORE_TAXPROFILER:TAXPROFILER:LONGREAD_HOSTREMOVAL:SAMTOOLS_FASTQ (ERR3201952) | |
| [67/ef3224] Submitted process > NFCORE_TAXPROFILER:TAXPROFILER:PROFILING:DIAMOND_BLASTX (db1|2613_se) | |
| [dc/daecfb] Submitted process > NFCORE_TAXPROFILER:TAXPROFILER:PROFILING:KAIJU_KAIJU (db5|2613_se) | |
| [b7/626a48] Submitted process > NFCORE_TAXPROFILER:TAXPROFILER:PROFILING:KMCP_SEARCH (db1|2613_se) | |
| [a6/1cdeb6] Submitted process > NFCORE_TAXPROFILER:TAXPROFILER:PROFILING:GANON_CLASSIFY (db1|2613_se) | |
| [75/299fe9] Submitted process > NFCORE_TAXPROFILER:TAXPROFILER:PROFILING:KRAKEN2_KRAKEN2 (db1|bracken|2613_se) | |
| [33/3bade4] Submitted process > NFCORE_TAXPROFILER:TAXPROFILER:PROFILING:METAPHLAN_METAPHLAN (metaphlan4|2613_se) | |
| [ca/9e2e4c] Submitted process > NFCORE_TAXPROFILER:TAXPROFILER:PROFILING:KRAKEN2_KRAKEN2 (db2|kraken2|2613_se) | |
| [a0/980f0a] Submitted process > NFCORE_TAXPROFILER:TAXPROFILER:PROFILING:METAPHLAN_METAPHLAN (metaphlan3|2613_se) | |
| [89/fe131d] Submitted process > NFCORE_TAXPROFILER:TAXPROFILER:MERGE_RUNS (2612) | |
| [e5/135567] Submitted process > NFCORE_TAXPROFILER:TAXPROFILER:MERGE_RUNS (ERR3201952) | |
| [97/eaea08] Submitted process > NFCORE_TAXPROFILER:TAXPROFILER:PROFILING:CENTRIFUGE_CENTRIFUGE (db3|2613_se) | |
| WARN: [nf-core/taxprofiler] Ganon has not been evaluated for Nanopore data. Skipping Ganon for sample ERR3201952_se. | |
| WARN: [nf-core/taxprofiler] KMCP is only suitable for short-read metagenomic profiling, with much lower sensitivity on long-read datasets. Skipping KMCP for sample ERR3201952_se. | |
| [af/48f471] Submitted process > NFCORE_TAXPROFILER:TAXPROFILER:PROFILING:DIAMOND_BLASTX (db1|2612_se) | |
| [4e/0ad027] Submitted process > NFCORE_TAXPROFILER:TAXPROFILER:PROFILING:CENTRIFUGE_CENTRIFUGE (db3|2612_se) | |
| [f2/5220dc] Submitted process > NFCORE_TAXPROFILER:TAXPROFILER:PROFILING:KMCP_SEARCH (db1|2612_se) | |
| [bc/c937ab] Submitted process > NFCORE_TAXPROFILER:TAXPROFILER:PROFILING:GANON_CLASSIFY (db1|2612_se) | |
| [b5/101d61] Submitted process > NFCORE_TAXPROFILER:TAXPROFILER:PROFILING:KRAKEN2_KRAKEN2 (db1|bracken|ERR3201952_se) | |
| [3b/aff61d] Submitted process > NFCORE_TAXPROFILER:TAXPROFILER:PROFILING:CENTRIFUGE_CENTRIFUGE (db3|ERR3201952_se) | |
| [77/29ffdf] Submitted process > NFCORE_TAXPROFILER:TAXPROFILER:PROFILING:KAIJU_KAIJU (db5|2612_se) | |
| [0c/d3490f] Submitted process > NFCORE_TAXPROFILER:TAXPROFILER:PROFILING:METAPHLAN_METAPHLAN (metaphlan4|2612_se) | |
| [c0/a66ab4] Submitted process > NFCORE_TAXPROFILER:TAXPROFILER:PROFILING:KRAKEN2_KRAKEN2 (db2|kraken2|2612_se) | |
| [3a/5d797f] Submitted process > NFCORE_TAXPROFILER:TAXPROFILER:PROFILING:METAPHLAN_METAPHLAN (metaphlan3|ERR3201952_se) | |
| [6d/c18bc6] Submitted process > NFCORE_TAXPROFILER:TAXPROFILER:PROFILING:DIAMOND_BLASTX (db1|ERR3201952_se) | |
| [5a/feaabb] Submitted process > NFCORE_TAXPROFILER:TAXPROFILER:PROFILING:KRAKEN2_KRAKEN2 (db1|bracken|2612_se) | |
| [7e/ffff15] Submitted process > NFCORE_TAXPROFILER:TAXPROFILER:PROFILING:METAPHLAN_METAPHLAN (metaphlan3|2612_se) | |
| [3c/4992db] Submitted process > NFCORE_TAXPROFILER:TAXPROFILER:PROFILING:KAIJU_KAIJU (db5|ERR3201952_se) | |
| [25/ae5c9e] Submitted process > NFCORE_TAXPROFILER:TAXPROFILER:PROFILING:KRAKEN2_KRAKEN2 (db2|kraken2|ERR3201952_se) | |
| [a9/99cdb3] Submitted process > NFCORE_TAXPROFILER:TAXPROFILER:PROFILING:METAPHLAN_METAPHLAN (metaphlan4|ERR3201952_se) | |
| [e2/2a89dd] Submitted process > NFCORE_TAXPROFILER:TAXPROFILER:PROFILING:KMCP_PROFILE (db1|2613_se) | |
| WARN: [nf-core/taxprofiler] Bracken has not been evaluated for Nanopore data. Skipping Bracken for sample ERR3201952_se. | |
| [0a/03dc15] Submitted process > NFCORE_TAXPROFILER:TAXPROFILER:VISUALIZATION_KRONA:KRAKENTOOLS_KREPORT2KRONA (ERR3201952_se) | |
| WARN: [nf-core/taxprofiler] Bracken has not been evaluated for Nanopore data. Skipping Bracken for sample ERR3201952_se. | |
| [4b/35be27] Submitted process > NFCORE_TAXPROFILER:TAXPROFILER:VISUALIZATION_KRONA:KRAKENTOOLS_KREPORT2KRONA (ERR3201952_se) | |
| [cf/e90178] Submitted process > NFCORE_TAXPROFILER:TAXPROFILER:VISUALIZATION_KRONA:KRONA_CLEANUP (ERR3201952_se) | |
| [24/f2cfe8] Submitted process > NFCORE_TAXPROFILER:TAXPROFILER:PROFILING:CENTRIFUGE_KREPORT (db3|ERR3201952_se) | |
| [22/38e550] Submitted process > NFCORE_TAXPROFILER:TAXPROFILER:PROFILING:GANON_REPORT (db1|2613_se) | |
| [a7/3589e2] Submitted process > NFCORE_TAXPROFILER:TAXPROFILER:PROFILING:KAIJU_KAIJU2TABLE_SINGLE (db5|ERR3201952_se) | |
| [b3/fe785d] Submitted process > NFCORE_TAXPROFILER:TAXPROFILER:VISUALIZATION_KRONA:KAIJU_KAIJU2KRONA (db5|ERR3201952_se) | |
| [29/875b6a] Submitted process > NFCORE_TAXPROFILER:TAXPROFILER:VISUALIZATION_KRONA:KRONA_CLEANUP (ERR3201952_se) | |
| [4a/5eb1e6] Submitted process > NFCORE_TAXPROFILER:TAXPROFILER:VISUALIZATION_KRONA:KRONA_CLEANUP (ERR3201952_se) | |
| [61/84f7f9] Submitted process > NFCORE_TAXPROFILER:TAXPROFILER:VISUALIZATION_KRONA:KRAKENTOOLS_KREPORT2KRONA (ERR3201952_se) | |
| [15/9903b1] Submitted process > NFCORE_TAXPROFILER:TAXPROFILER:VISUALIZATION_KRONA:KRONA_CLEANUP (ERR3201952_se) | |
| [6d/f9cd87] Submitted process > NFCORE_TAXPROFILER:TAXPROFILER:VISUALIZATION_KRONA:KRAKENTOOLS_KREPORT2KRONA (2613_se) | |
| [5b/5487f4] Submitted process > NFCORE_TAXPROFILER:TAXPROFILER:PROFILING:BRACKEN_BRACKEN (db1|2613_se) | |
| [08/936a44] Submitted process > NFCORE_TAXPROFILER:TAXPROFILER:VISUALIZATION_KRONA:KRAKENTOOLS_KREPORT2KRONA (2613_se) | |
| [e9/df49ff] Submitted process > NFCORE_TAXPROFILER:TAXPROFILER:VISUALIZATION_KRONA:KRONA_CLEANUP (2613_se) | |
| [20/d38e51] Submitted process > NFCORE_TAXPROFILER:TAXPROFILER:VISUALIZATION_KRONA:KRONA_CLEANUP (2613_se) | |
| [52/e0a752] Submitted process > NFCORE_TAXPROFILER:TAXPROFILER:PROFILING:GANON_REPORT (db1|2612_se) | |
| [c8/2ad7ad] Submitted process > NFCORE_TAXPROFILER:TAXPROFILER:PROFILING:KMCP_PROFILE (db1|2612_se) | |
| [d8/5277cd] Submitted process > NFCORE_TAXPROFILER:TAXPROFILER:PROFILING:CENTRIFUGE_KREPORT (db3|2613_se) | |
| [33/e0238e] Submitted process > NFCORE_TAXPROFILER:TAXPROFILER:PROFILING:KAIJU_KAIJU2TABLE_SINGLE (db5|2613_se) | |
| [a3/10e39d] Submitted process > NFCORE_TAXPROFILER:TAXPROFILER:VISUALIZATION_KRONA:KAIJU_KAIJU2KRONA (db5|2613_se) | |
| [ad/7dfa6b] Submitted process > NFCORE_TAXPROFILER:TAXPROFILER:VISUALIZATION_KRONA:KRONA_CLEANUP (2613_se) | |
| [fe/9af2b8] Submitted process > NFCORE_TAXPROFILER:TAXPROFILER:VISUALIZATION_KRONA:KRAKENTOOLS_KREPORT2KRONA (2613_se) | |
| [44/ff9fd2] Submitted process > NFCORE_TAXPROFILER:TAXPROFILER:VISUALIZATION_KRONA:KRONA_CLEANUP (2613_se) | |
| [cd/119162] Submitted process > NFCORE_TAXPROFILER:TAXPROFILER:VISUALIZATION_KRONA:KRAKENTOOLS_KREPORT2KRONA (2612_se) | |
| [f4/c25bca] Submitted process > NFCORE_TAXPROFILER:TAXPROFILER:VISUALIZATION_KRONA:KRONA_CLEANUP (2612_se) | |
| [8c/3c0c2d] Submitted process > NFCORE_TAXPROFILER:TAXPROFILER:VISUALIZATION_KRONA:KRAKENTOOLS_KREPORT2KRONA (2612_se) | |
| [56/b4bb83] Submitted process > NFCORE_TAXPROFILER:TAXPROFILER:PROFILING:BRACKEN_BRACKEN (db1|2612_se) | |
| [7a/e487bc] Submitted process > NFCORE_TAXPROFILER:TAXPROFILER:VISUALIZATION_KRONA:KRONA_CLEANUP (2612_se) | |
| [16/b7eb50] Submitted process > NFCORE_TAXPROFILER:TAXPROFILER:PROFILING:KAIJU_KAIJU2TABLE_SINGLE (db5|2612_se) | |
| [ae/349b9b] Submitted process > NFCORE_TAXPROFILER:TAXPROFILER:VISUALIZATION_KRONA:KAIJU_KAIJU2KRONA (db5|2612_se) | |
| [43/ac52c8] Submitted process > NFCORE_TAXPROFILER:TAXPROFILER:VISUALIZATION_KRONA:KRONA_CLEANUP (2612_se) | |
| [d7/e0f20e] Submitted process > NFCORE_TAXPROFILER:TAXPROFILER:PROFILING:CENTRIFUGE_KREPORT (db3|2612_se) | |
| [71/16c221] Submitted process > NFCORE_TAXPROFILER:TAXPROFILER:VISUALIZATION_KRONA:KRAKENTOOLS_KREPORT2KRONA (2612_se) | |
| [a5/3e63ae] Submitted process > NFCORE_TAXPROFILER:TAXPROFILER:VISUALIZATION_KRONA:KRONA_CLEANUP (2612_se) | |
| [ed/55909b] Submitted process > NFCORE_TAXPROFILER:TAXPROFILER:STANDARDISATION_PROFILES:GANON_TABLE (db1) | |
| [aa/fb2a66] Submitted process > NFCORE_TAXPROFILER:TAXPROFILER:STANDARDISATION_PROFILES:TAXPASTA_MERGE (diamond|db1) | |
| [94/423a87] Submitted process > NFCORE_TAXPROFILER:TAXPROFILER:STANDARDISATION_PROFILES:METAPHLAN_MERGEMETAPHLANTABLES (1) | |
| [7e/cf791d] Submitted process > NFCORE_TAXPROFILER:TAXPROFILER:STANDARDISATION_PROFILES:METAPHLAN_MERGEMETAPHLANTABLES (2) | |
| [04/7398f3] Submitted process > NFCORE_TAXPROFILER:TAXPROFILER:VISUALIZATION_KRONA:KRONA_KTIMPORTTEXT (db3) | |
| [87/aecae4] Submitted process > NFCORE_TAXPROFILER:TAXPROFILER:VISUALIZATION_KRONA:KRONA_KTIMPORTTEXT (db2) | |
| [cc/5c56db] Submitted process > NFCORE_TAXPROFILER:TAXPROFILER:VISUALIZATION_KRONA:KRONA_KTIMPORTTEXT (db1) | |
| [82/a8b912] Submitted process > NFCORE_TAXPROFILER:TAXPROFILER:STANDARDISATION_PROFILES:BRACKEN_COMBINEBRACKENOUTPUTS (db1) | |
| [d5/677840] Submitted process > NFCORE_TAXPROFILER:TAXPROFILER:VISUALIZATION_KRONA:KRONA_KTIMPORTTEXT (db5) | |
| [c9/640c0f] Submitted process > NFCORE_TAXPROFILER:TAXPROFILER:STANDARDISATION_PROFILES:TAXPASTA_MERGE (kraken2|db1) | |
| [e4/78bd81] Submitted process > NFCORE_TAXPROFILER:TAXPROFILER:STANDARDISATION_PROFILES:TAXPASTA_MERGE (ganon|db1) | |
| [fc/4e09d6] Submitted process > NFCORE_TAXPROFILER:TAXPROFILER:STANDARDISATION_PROFILES:KRAKENTOOLS_COMBINEKREPORTS_KRAKEN (1) | |
| [76/74258e] Submitted process > NFCORE_TAXPROFILER:TAXPROFILER:STANDARDISATION_PROFILES:TAXPASTA_MERGE (metaphlan|metaphlan4) | |
| [df/ca481e] Submitted process > NFCORE_TAXPROFILER:TAXPROFILER:STANDARDISATION_PROFILES:TAXPASTA_MERGE (metaphlan|metaphlan3) | |
| [d1/fc78ce] Submitted process > NFCORE_TAXPROFILER:TAXPROFILER:STANDARDISATION_PROFILES:TAXPASTA_MERGE (bracken|db1) | |
| [55/27ed64] Submitted process > NFCORE_TAXPROFILER:TAXPROFILER:STANDARDISATION_PROFILES:TAXPASTA_MERGE (kraken2|db2) | |
| [3c/748588] Submitted process > NFCORE_TAXPROFILER:TAXPROFILER:STANDARDISATION_PROFILES:TAXPASTA_MERGE (kaiju|db5) | |
| [7f/957022] Submitted process > NFCORE_TAXPROFILER:TAXPROFILER:STANDARDISATION_PROFILES:TAXPASTA_MERGE (centrifuge|db3) | |
| [23/1b5534] Submitted process > NFCORE_TAXPROFILER:TAXPROFILER:STANDARDISATION_PROFILES:TAXPASTA_MERGE (kmcp|db1) | |
| [93/79a64c] Submitted process > NFCORE_TAXPROFILER:TAXPROFILER:STANDARDISATION_PROFILES:KRAKENTOOLS_COMBINEKREPORTS_CENTRIFUGE (1) | |
| [68/2578db] Submitted process > NFCORE_TAXPROFILER:TAXPROFILER:STANDARDISATION_PROFILES:KRAKENTOOLS_COMBINEKREPORTS_KRAKEN (2) | |
| [16/cb9929] Submitted process > NFCORE_TAXPROFILER:TAXPROFILER:CUSTOM_DUMPSOFTWAREVERSIONS (1) | |
| [81/cc797b] Submitted process > NFCORE_TAXPROFILER:TAXPROFILER:MULTIQC | |
| -[nf-core/taxprofiler] Pipeline completed successfully- |
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