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import os | |
import subprocess | |
import rasterio | |
def extract_bands(file, bands=None): | |
dataset = rasterio.open(file) | |
if bands is None: | |
bands = range(1, dataset.count + 1) | |
elif isinstance(bands, int): | |
bands = [bands] | |
meta = dataset.meta.copy() | |
meta.update({ | |
'count': 1 | |
}) | |
outfiles = [] | |
#descriptions = rasterio.open(file).descriptions | |
for band in bands: | |
outfile = os.path.splitext(file)[0] + "_band_{}".format(band) + os.path.splitext(file)[1] | |
with rasterio.open(outfile, 'w', **meta) as dst: | |
dst.write(dataset.read(band), 1) | |
#if descriptions[band - 1] is not None: | |
# dst.set_band_description(1, descriptions[band-1]) | |
outfiles.append(outfile) | |
return outfiles | |
f = 'AMPHIBIA_STACK_ESH_NodupsLC_927_sub1_fraction_10km-0000001536-0000000000.tif' | |
os.path.exists(f) | |
extract_bands(f) |
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library(stars) | |
library(tidyverse) | |
tif <- 'AMPHIBIA_STACK_ESH_NodupsLC_927_sub1_fraction_10km-0000001536-0000003072.tif' | |
x <- read_stars(tif,proxy = F) | |
t1 <- Sys.time() | |
for(i in stars::st_get_dimension_values(x,'band')){ | |
y <- x %>% slice(index = i, along = "band") | |
write_stars(y,dsn = paste0('C:/Users/Martin/Downloads/drive-download-20190807T191621Z-001/','band',i,'.tif'), | |
type = 'UInt16') | |
} | |
Sys.time() - t1 |
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