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# Include BAAD data | |
#http://www.esajournals.org/doi/abs/10.1890/14-1889.1 | |
library(dplyr) | |
library(ggplot2) | |
fd <- tempfile() | |
download.file("http://www.esapubs.org/archive/ecol/E096/128/baad_data.zip",destfile = fd) | |
b <- unzip(fd) | |
data <- read.csv("baad_data/baad_data.csv",header=T) # the data | |
meta <- read.csv("baad_data/baad_dictionary.csv",header=T) # the column explanations | |
# Filter those out without an age | |
data_a <- data %>% filter(!is.na(age)) | |
summary(data_a$age) | |
qplot(data_a$age,geom="density") | |
# On a map | |
world_map <- map_data("world")#Get world map info | |
p <- ggplot() + coord_fixed()#Create a base plot | |
p <- p + geom_polygon(data=world_map,aes(x=long,y=lat,group=group),fill="white")#Add map to base plot | |
p <- p + geom_rect(aes(xmin=-180,xmax=180,ymin=-23.5,ymax=23.5),fill="orange",alpha=.3) | |
p <- p + ylab("Latitude (°)") + xlab("Longitude (°)") | |
p + geom_point(data=data_a,aes(x=longitude,y=latitude,size=age),alpha=0.5) | |
# After Brown and Lugo | |
# Aboveground biomass density (t/ha) = VOB * WD * BEF | |
# AGB = r.st ... |
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