Types of Seq

types_of_seq

csvquote pubmed_result.csv | cut -d ',' -f 1 | grep -oP '\S+-Seq\b|\S+-seq\b|\S+Seq\b|\S+seq\b|\S+\sseq\b|\S+\sSeq\b' | tr -d \"\'\(\[ | sed s/seq/Seq/ | sort | uniq -c | sort -gr 

To get input data:

1. Go to NCBI pubmed search seq[Title] ## Works for both cases
2. Click Send to: -> File -> select Format CSV -> Create File
   csvquote can be found here: https://github.com/dbro/csvquote

Results (237 some FPs) are:

   1608 RNA-Seq
    425 ChIP-Seq
     38 mRNA-Seq
     24 RAD-Seq
     24 CLIP-Seq
     15 DNase-Seq
     12 Tn-Seq
     12 SLAF-Seq
     12 Seq
     10 RIP-Seq
      9 MethylCap-Seq
      9 4C-Seq
      8 MeDIP-Seq
      8 ATAC-Seq
      6 sRNA-Seq
      6 SHAPE-Seq
      6 microRNA-Seq
      5 QTL-Seq
      5 Pool-Seq
      5 miRNA-Seq
      5 dRNA-Seq
      4 RNA Seq
      4 Nascent-Seq
      4 GRO-Seq
      4 FAIRE-Seq
      4 DNA-Seq
      3 NET-Seq
      3 MNase-Seq
      3 DamID-Seq
      3 bisulfite-Seq
      3 Bind-n-Seq
      2 STARR-Seq
      2 smRNA-Seq
      2 SELEX-Seq
      2 Ribo-Seq
      2 ribo-Seq
      2 Pseudo-Seq
      2 PAS-Seq
      2 PA-Seq
      2 NSR-Seq
      2 Mu-Seq
      2 Mod-Seq
      2 MethylC-Seq
      2 MeRIP-Seq
      2 MBD-Seq
      2 m6)A-Seq
      2 indel-Seq
      2 ICE-Seq
      2 GUIDE-Seq
      2 gPAR-CLIP-Seq
      2 FRT-Seq
      2 Frac-Seq
      2 EBSeq
      2 Digenome-Seq
      2 Degradome-Seq
      2 ChEC-Seq
      2 BS-Seq
      2 BSR-Seq
      2 Bisulfite-Seq
      2 4sUDRB-Seq
      1 ZIP-Seq
      1 Y2H-Seq
      1 WTTS-Seq
      1 WGBS-Seq
      1 VDJ-Seq
      1 TSS-Seq
      1 TSS Seq
      1 TruSeq
      1 tRNA-Seq
      1 TRAP-Seq
      1 Transcriptome-Seq
      1 ToPASeq
      1 TnLE-Seq
      1 THS-Seq
      1 Term-Seq
      1 TAIL-Seq
      1 tagRNA-Seq
      1 Structure-Seq
      1 structure-Seq
      1 Strand-Seq
      1 SPOT-Seq
      1 SpliceSeq
      1 Spec-Seq
      1 Sort-Seq
      1 Sono-Seq
      1 SnapShot-Seq
      1 Smart-Seq
      1 smallRNA-Seq
      1 SISPA-Seq
      1 shRNA-Seq
      1 Ship-Seq
      1 SC3-Seq
      1 SASI-Seq
      1 SAGE-Seq
      1 RUbioSeq
      1 RT-PCR-Seq
      1 rSW-Seq
      1 RIPiT-Seq
      1 Ribose-Seq
      1 RiboFR-Seq
      1 Retrieve-ensembl-Seq
      1 Rep-Seq
      1 RelSeq
      1 ReliefSeq
      1 RefSeq
      1 RED-Seq
      1 RECOMB-Seq
      1 RC-Seq
      1 RCA-Seq
      1 RATE-Seq
      1 RASL-Seq
      1 QuickRNASeq
      1 Quartz-Seq
      1 QIS-Seq
      1 pVAC-Seq
      1 Pu-Seq
      1 PrimerSeq
      1 pool-Seq
      1 Poly-Ribo-Seq
      1 Ploidy-Seq
      1 Plasma-Seq
      1 PhIP-Seq
      1 PGRN-Seq
      1 Perm-Seq
      1 PennSeq
      1 PeakSeq
      1 PAT-Seq
      1 Patch-Seq
      1 ParSeq
      1 of Seq
      1 OD-Seq
      1 nRIP-Seq
      1 NPEBSeq
      1 NOISeq
      1 neurodegeneration: Seq
      1 ncPRO-Seq
      1 NA-Seq
      1 Nano-MeDIP-Seq
      1 nano-ChIP-Seq
      1 MRE-Seq
      1 mQTL-Seq
      1 MPE-Seq
      1 MLPA-Seq
      1 MitoRCA-Seq
      1 MIRA-Seq
      1 MIG-Seq
      1 MicroRNA-Seq
      1 microarray/RNA-Seq
      1 Methyl-Seq
      1 Methylcap-Seq
      1 methylCap-Seq
      1 MetaRNA-Seq
      1 meta-RNA-Seq
      1 MBDCap-Seq
      1 MAP-Seq
      1 m⁶A-Seq
      1 m6A-Seq
      1 LFCSeq
      1 L1-Seq
      1 JBP1-Seq
      1 IVT-Seq
      1 IS-Seq
      1 iRNA-Seq
      1 iMem-Seq
      1 iCLIP-Seq
      1 iASeq
      1 IAOSeq
      1 Hyb-Seq
      1 hMeDIP-Seq
      1 Hi-Seq
      1 HippoSeq
      1 hide-and-Seq
      1 Hap-Seq
      1 guideSeq
      1 GT-Seq
      1 G&T-Seq
      1 GIIRA--RNA-Seq
      1 GAP-Seq
      1 F-Seq
      1 FREQ-Seq
      1 FACS-Seq
      1 exome-Seq
      1 et Seq
      1 EPIG-Seq
      1 EnD-Seq
      1 easyRNASeq
      1 Dr.Seq
      1 DNaseI-Seq
      1 DIP-SC-Seq
      1 DEXSeq
      1 DEGSeq
      1 DeconRNASeq
      1 ddRAD-Seq
      1 dash Seq
      1 DAE-Seq
      1 cP-RNA-Seq
      1 Cos-Seq
      1 COBRA-Seq
      1 CNV-Seq
      1 circTAIL-Seq
      1 chIP-Seq
      1 Chem-Seq
      1 CETCh-Seq
      1 CEL-Seq
      1 cells: Seq
      1 cChIP-Seq
      1 CATCH-Seq
      1 CapStarr-Seq
      1 CAPP-Seq
      1 cancers: Seq
      1 CAGE-Seq
      1 CAB-Seq
      1 Bubble-Seq
      1 BruUV-Seq
      1 Bru-Seq
      1 BruChase-Seq
      1 BRIC-Seq
      1 Break-Seq
      1 BrAD-Seq
      1 BisChIP-Seq
      1 BiNGS!SL-Seq
      1 bead-Seq
      1 Basic4CSeq
      1 BAsE-Seq
      1 Bar-Seq
      1 AutoMeDIP-Seq
      1 ARM-Seq
      1 ARH-Seq
      1 and Seq
      1 All-Food-Seq
      1 AHT-ChIP-Seq
      1 Affinity-Seq
      1 AbsCN-Seq
      1 5RNA-Seq
      1 4sU-Seq
      1 3-end-Seq
      1 3C-Seq