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/* | |
Here are the alignment data structures we covered during today’s call. The storage for alignment data looks like this: | |
*/ | |
template <typename system_tag> | |
struct BAM_alignment_batch_storage | |
{ | |
uint32 num_reads; | |
nvbio::vector<system_tag, cigar_op> cigars; |
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#include <stdlib.h> | |
#include <unistd.h> | |
#include <stdio.h> | |
#include "htslib/vcf.h" | |
int main(int argc, char *argv[]) | |
{ | |
int c, is_sam = 0, is_copy = 0; | |
long cnt = 0; | |
vcfFile *fp; |
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" Vundle configuration | |
set nocompatible " be iMproved, required | |
filetype off " required | |
set rtp+=~/.vim/bundle/vundle/ " set the runtime path to include Vundle and initialize | |
call vundle#begin() | |
" Plugins | |
Bundle 'gmarik/vundle' | |
Bundle 'Valloric/YouCompleteMe' | |
Bundle 'a.vim' |