PersistenceImage Output

gistfile1.txt

---------------------------------------------------------------------------
_RemoteTraceback                          Traceback (most recent call last)
_RemoteTraceback: 
"""
Traceback (most recent call last):
  File "C:\Users\nicho\Anaconda3\lib\site-packages\joblib\externals\loky\process_executor.py", line 418, in _process_worker
    r = call_item()
  File "C:\Users\nicho\Anaconda3\lib\site-packages\joblib\externals\loky\process_executor.py", line 272, in __call__
    return self.fn(*self.args, **self.kwargs)
  File "C:\Users\nicho\Anaconda3\lib\site-packages\joblib\_parallel_backends.py", line 567, in __call__
    return self.func(*args, **kwargs)
  File "C:\Users\nicho\Anaconda3\lib\site-packages\joblib\parallel.py", line 225, in __call__
    for func, args, kwargs in self.items]
  File "C:\Users\nicho\Anaconda3\lib\site-packages\joblib\parallel.py", line 225, in <listcomp>
    for func, args, kwargs in self.items]
  File "C:\Users\nicho\Anaconda3\lib\site-packages\gtda\diagrams\_metrics.py", line 102, in persistence_images
    diagrams[:, :, 1] = diagrams[:, :, 1] - diagrams[:, :, 0]
ValueError: assignment destination is read-only
"""

The above exception was the direct cause of the following exception:

ValueError                                Traceback (most recent call last)
<ipython-input-177-9725a0e40e99> in <module>
      8 diagrams[1, :, 1] += 1
      9 pi = PersistenceImage(sigma=1, n_bins=n_bins, n_jobs=2)
---> 10 x_t = pi.fit_transform(diagrams)

~\Anaconda3\lib\site-packages\gtda\utils\_docs.py in fit_transform_wrapper(*args, **kwargs)
    104         @wraps(original_fit_transform)
    105         def fit_transform_wrapper(*args, **kwargs):
--> 106             return original_fit_transform(*args, **kwargs)
    107         fit_transform_wrapper.__doc__ = \
    108             make_fit_transform_docs(fit_docs, transform_docs)

~\Anaconda3\lib\site-packages\sklearn\base.py in fit_transform(self, X, y, **fit_params)
    569         if y is None:
    570             # fit method of arity 1 (unsupervised transformation)
--> 571             return self.fit(X, **fit_params).transform(X)
    572         else:
    573             # fit method of arity 2 (supervised transformation)

<ipython-input-167-4ed6d3909366> in transform(self, X, y)
     20                                     self.weights_[dim],
     21                                     self.sigma)
---> 22         for dim in self.homology_dimensions_
     23         for s in gen_even_slices(X.shape[0],
     24                                  effective_n_jobs(self.n_jobs))

~\Anaconda3\lib\site-packages\joblib\parallel.py in __call__(self, iterable)
    932 
    933             with self._backend.retrieval_context():
--> 934                 self.retrieve()
    935             # Make sure that we get a last message telling us we are done
    936             elapsed_time = time.time() - self._start_time

~\Anaconda3\lib\site-packages\joblib\parallel.py in retrieve(self)
    831             try:
    832                 if getattr(self._backend, 'supports_timeout', False):
--> 833                     self._output.extend(job.get(timeout=self.timeout))
    834                 else:
    835                     self._output.extend(job.get())

~\Anaconda3\lib\site-packages\joblib\_parallel_backends.py in wrap_future_result(future, timeout)
    519         AsyncResults.get from multiprocessing."""
    520         try:
--> 521             return future.result(timeout=timeout)
    522         except LokyTimeoutError:
    523             raise TimeoutError()

~\Anaconda3\lib\concurrent\futures\_base.py in result(self, timeout)
    430                 raise CancelledError()
    431             elif self._state == FINISHED:
--> 432                 return self.__get_result()
    433             else:
    434                 raise TimeoutError()

~\Anaconda3\lib\concurrent\futures\_base.py in __get_result(self)
    382     def __get_result(self):
    383         if self._exception:
--> 384             raise self._exception
    385         else:
    386             return self._result

ValueError: assignment destination is read-only