This automatically changes the default theme in the android_manifest.xml to the theme specified in the var "NEW_THEME" using p4a.hooks
The example I used is here https://gist.github.com/tito/4f75385054222182e4f0cf56c90dcdf8 with further instructions in how to implement it.
This hook_theme.py file is the 'hook_something.py' mentioned in Tito's example.
It should be noted that the appropriate gradle dependency for you're chosen theme will need added to the buildozer.spec
mine in this case is android.gradle_dependencies = 'com.android.support:appcompat-v7:26.0.0-alpha1'