Mapnik build with Clang++36 for FreeBSD 10.1 error from config.log

gistfile1.txt

feb1720151149PST
console.log
produced when attempt to compile Mapnik
run: scons configure CXX=/usr/local/bin/clang++36

file /usr/local/mapnik.git/SConstruct,line 1116:
	Configure(confdir = .sconf_temp)
scons: Configure: Checking for freetype-config... 
freetype-config --libs --cflags
-I/usr/local/include/freetype2
-L/usr/local/lib -lfreetype
scons: Configure: yes

scons: Configure: Checking for xml2-config... 
xml2-config --cflags
-I/usr/local/include/libxml2 -I/usr/include
scons: Configure: yes

scons: Configure: Checking for dlfcn.h support ... 
.sconf_temp/conftest_2.cpp <-
  |
  |
  |#include <dlfcn.h>
  |
  |int main()
  |{
  |    return 0;
  |}
  |
  |
/usr/local/bin/clang++36 -o .sconf_temp/conftest_2.o -c -std=c++11 -DSHAPE_MEMORY_MAPPED_FILE -Iinclude -I/usr/include -I/usr/local/include/freetype2 -I/usr/local/include/libxml2 .sconf_temp/conftest_2.cpp
scons: Configure: yes

.sconf_temp/conftest_3.cpp <-
  |
  |
  |int main()
  |{
  |#if __cplusplus >= 201103
  |    return 0;
  |#else
  |    return -1;
  |#endif
  |}
  |
  |
/usr/local/bin/clang++36 -o .sconf_temp/conftest_3.o -c -std=c++11 -DSHAPE_MEMORY_MAPPED_FILE -DMAPNIK_HAS_DLCFN -Iinclude -I/usr/local/include/libxml2 -I/usr/local/include/freetype2 -I/usr/include .sconf_temp/conftest_3.cpp
/usr/local/bin/clang++36 -o .sconf_temp/conftest_3 .sconf_temp/conftest_3.o -Lsrc -Lsrc/json -Lsrc/wkt -L/usr/local/lib -L/usr/lib -lpthread -lfreetype
.sconf_temp/conftest_3 > .sconf_temp/conftest_3.out
scons: Configure: Checking if compiler (/usr/local/bin/clang++36) supports -std=c++11 flag... 
scons: Configure: (cached) yes

scons: Configure: Checking for C library z... 
.sconf_temp/conftest_4.c <-
  |
  |
  |#include "zlib.h"
  |
  |int
  |main() {
  |  
  |return 0;
  |}
  |
gcc -o .sconf_temp/conftest_4.o -c -DSHAPE_MEMORY_MAPPED_FILE -DMAPNIK_HAS_DLCFN -Iinclude -I/usr/local/include/libxml2 -I/usr/local/include/freetype2 -I/usr/include .sconf_temp/conftest_4.c
gcc: not found
scons: Configure: no

scons: Configure: Checking for C++ library icuuc... 
.sconf_temp/conftest_5.cpp <-
  |
  |
  |#include "unicode/unistr.h"
  |
  |int
  |main() {
  |  
  |return 0;
  |}
  |
/usr/local/bin/clang++36 -o .sconf_temp/conftest_5.o -c -std=c++11 -DSHAPE_MEMORY_MAPPED_FILE -DMAPNIK_HAS_DLCFN -Iinclude -I/usr/local/include/libxml2 -I/usr/local/include/freetype2 -I/usr/include .sconf_temp/conftest_5.cpp
.sconf_temp/conftest_5.cpp:3:10: fatal error: 'unicode/unistr.h' file not found
#include "unicode/unistr.h"
         ^
1 error generated.
scons: Configure: no

scons: Configure: Checking for C++ library harfbuzz... 
.sconf_temp/conftest_6.cpp <-
  |
  |
  |#include "harfbuzz/hb.h"
  |
  |int
  |main() {
  |  
  |return 0;
  |}
  |
/usr/local/bin/clang++36 -o .sconf_temp/conftest_6.o -c -std=c++11 -DSHAPE_MEMORY_MAPPED_FILE -DMAPNIK_HAS_DLCFN -Iinclude -I/usr/local/include/libxml2 -I/usr/local/include/freetype2 -I/usr/include .sconf_temp/conftest_6.cpp
.sconf_temp/conftest_6.cpp:3:10: fatal error: 'harfbuzz/hb.h' file not found
#include "harfbuzz/hb.h"
         ^
1 error generated.
scons: Configure: no

scons: Configure: Searching for boost libs and headers... 
scons: Configure: (cached) 
Found boost libs: /usr/local/lib
Found boost headers: /usr/local/include

scons: Configure: Checking for C++ header file boost/version.hpp... 
.sconf_temp/conftest_7.cpp <-
  |
  |#include <boost/version.hpp>
  |
  |
/usr/local/bin/clang++36 -o .sconf_temp/conftest_7.o -c -std=c++11 -DSHAPE_MEMORY_MAPPED_FILE -DMAPNIK_HAS_DLCFN -DBIGINT -Iinclude -I/usr/local/include/libxml2 -I/usr/local/include/freetype2 -I/usr/include -I/usr/local/include .sconf_temp/conftest_7.cpp
scons: Configure: yes

.sconf_temp/conftest_8.cpp <-
  |
  |
  |#include <boost/version.hpp>
  |#include <iostream>
  |
  |int main()
  |{
  |
  |std::cout << BOOST_LIB_VERSION << std::endl;
  |return 0;
  |}
  |
  |
/usr/local/bin/clang++36 -o .sconf_temp/conftest_8.o -c -std=c++11 -DSHAPE_MEMORY_MAPPED_FILE -DMAPNIK_HAS_DLCFN -DBIGINT -Iinclude -I/usr/local/include/libxml2 -I/usr/local/include/freetype2 -I/usr/include -I/usr/local/include .sconf_temp/conftest_8.cpp
/usr/local/bin/clang++36 -o .sconf_temp/conftest_8 .sconf_temp/conftest_8.o -Lsrc -Lsrc/json -Lsrc/wkt -L/usr/local/lib -L/usr/lib -lpthread -lfreetype
.sconf_temp/conftest_8 > .sconf_temp/conftest_8.out
scons: Configure: Checking for Boost version >= 1.47... 
.sconf_temp/conftest_9.cpp <-
  |
  |
  |#include <boost/version.hpp>
  |
  |int main()
  |{
  |    return BOOST_VERSION >= 104700 ? 0 : 1;
  |}
  |
  |
/usr/local/bin/clang++36 -o .sconf_temp/conftest_9.o -c -std=c++11 -DSHAPE_MEMORY_MAPPED_FILE -DMAPNIK_HAS_DLCFN -DBIGINT -Iinclude -I/usr/local/include -I/usr/local/include/freetype2 -I/usr/local/include/libxml2 -I/usr/include .sconf_temp/conftest_9.cpp
/usr/local/bin/clang++36 -o .sconf_temp/conftest_9 .sconf_temp/conftest_9.o -Lsrc -Lsrc/json -Lsrc/wkt -L/usr/local/lib -L/usr/lib -lpthread -lfreetype
.sconf_temp/conftest_9 > .sconf_temp/conftest_9.out
scons: Configure: yes

scons: Configure: Checking for C++ library boost_system... 
.sconf_temp/conftest_10.cpp <-
  |
  |
  |#include "boost/system/system_error.hpp"
  |
  |int
  |main() {
  |  
  |return 0;
  |}
  |
/usr/local/bin/clang++36 -o .sconf_temp/conftest_10.o -c -std=c++11 -DSHAPE_MEMORY_MAPPED_FILE -DMAPNIK_HAS_DLCFN -DBIGINT -Iinclude -I/usr/local/include -I/usr/local/include/freetype2 -I/usr/local/include/libxml2 -I/usr/include .sconf_temp/conftest_10.cpp
/usr/local/bin/clang++36 -o .sconf_temp/conftest_10 .sconf_temp/conftest_10.o -Lsrc -Lsrc/json -Lsrc/wkt -L/usr/local/lib -L/usr/lib -lpthread -lfreetype -lboost_system
scons: Configure: yes

scons: Configure: Checking for C++ library boost_filesystem... 
.sconf_temp/conftest_11.cpp <-
  |
  |
  |#include "boost/filesystem/operations.hpp"
  |
  |int
  |main() {
  |  
  |return 0;
  |}
  |
/usr/local/bin/clang++36 -o .sconf_temp/conftest_11.o -c -std=c++11 -DSHAPE_MEMORY_MAPPED_FILE -DMAPNIK_HAS_DLCFN -DBIGINT -Iinclude -I/usr/local/include -I/usr/local/include/freetype2 -I/usr/local/include/libxml2 -I/usr/include .sconf_temp/conftest_11.cpp
/usr/local/bin/clang++36 -o .sconf_temp/conftest_11 .sconf_temp/conftest_11.o -Lsrc -Lsrc/json -Lsrc/wkt -L/usr/local/lib -L/usr/lib -lpthread -lfreetype -lboost_system -lboost_filesystem
scons: Configure: yes

scons: Configure: Checking for C++ library boost_regex... 
.sconf_temp/conftest_12.cpp <-
  |
  |
  |#include "boost/regex.hpp"
  |
  |int
  |main() {
  |  
  |return 0;
  |}
  |
/usr/local/bin/clang++36 -o .sconf_temp/conftest_12.o -c -std=c++11 -DSHAPE_MEMORY_MAPPED_FILE -DMAPNIK_HAS_DLCFN -DBIGINT -Iinclude -I/usr/local/include -I/usr/local/include/freetype2 -I/usr/local/include/libxml2 -I/usr/include .sconf_temp/conftest_12.cpp
In file included from .sconf_temp/conftest_12.cpp:3:
In file included from /usr/local/include/boost/regex.hpp:31:
In file included from /usr/local/include/boost/regex/v4/regex.hpp:48:
/usr/local/include/boost/regex/v4/regex_raw_buffer.hpp:132:7: warning: 'register' storage class specifier is deprecated [-Wdeprecated-register]
      register pointer result = end;
      ^~~~~~~~~
1 warning generated.
/usr/local/bin/clang++36 -o .sconf_temp/conftest_12 .sconf_temp/conftest_12.o -Lsrc -Lsrc/json -Lsrc/wkt -L/usr/local/lib -L/usr/lib -lpthread -lfreetype -lboost_system -lboost_filesystem -lboost_regex
scons: Configure: yes

scons: Configure: Checking for C++ library boost_program_options... 
.sconf_temp/conftest_13.cpp <-
  |
  |
  |#include "boost/program_options.hpp"
  |
  |int
  |main() {
  |  
  |return 0;
  |}
  |
/usr/local/bin/clang++36 -o .sconf_temp/conftest_13.o -c -std=c++11 -DSHAPE_MEMORY_MAPPED_FILE -DMAPNIK_HAS_DLCFN -DBIGINT -Iinclude -I/usr/local/include -I/usr/local/include/freetype2 -I/usr/local/include/libxml2 -I/usr/include .sconf_temp/conftest_13.cpp
/usr/local/bin/clang++36 -o .sconf_temp/conftest_13 .sconf_temp/conftest_13.o -Lsrc -Lsrc/json -Lsrc/wkt -L/usr/local/lib -L/usr/lib -lpthread -lfreetype -lboost_system -lboost_filesystem -lboost_regex -lboost_program_options
scons: Configure: yes

scons: Configure: Checking for C++ library boost_thread... 
.sconf_temp/conftest_14.cpp <-
  |
  |
  |#include "boost/thread/mutex.hpp"
  |
  |int
  |main() {
  |  
  |return 0;
  |}
  |
/usr/local/bin/clang++36 -o .sconf_temp/conftest_14.o -c -std=c++11 -DSHAPE_MEMORY_MAPPED_FILE -DMAPNIK_HAS_DLCFN -DBIGINT -Iinclude -I/usr/local/include -I/usr/local/include/freetype2 -I/usr/local/include/libxml2 -I/usr/include .sconf_temp/conftest_14.cpp
/usr/local/bin/clang++36 -o .sconf_temp/conftest_14 .sconf_temp/conftest_14.o -Lsrc -Lsrc/json -Lsrc/wkt -L/usr/local/lib -L/usr/lib -lpthread -lfreetype -lboost_system -lboost_filesystem -lboost_regex -lboost_program_options -lboost_thread
scons: Configure: yes

scons: Configure: Checking for pkg-config... 
pkg-config --atleast-pkgconfig-version=0.15.0
scons: Configure: yes

scons: Configure: Checking for C library sqlite3... 
.sconf_temp/conftest_16.c <-
  |
  |
  |#include "sqlite3.h"
  |
  |int
  |main() {
  |  
  |return 0;
  |}
  |
gcc -o .sconf_temp/conftest_16.o -c -DSHAPE_MEMORY_MAPPED_FILE -DMAPNIK_HAS_DLCFN -DBIGINT -I/usr/include -Iinclude -I/usr/local/include -I/usr/local/include/freetype2 -I/usr/local/include/libxml2 .sconf_temp/conftest_16.c
gcc: not found
scons: Configure: no

.sconf_temp/conftest_17.c <-
  |
  |
  |#include <sqlite3.h>
  |#include <stdio.h>
  |
  |int main()
  |{
  |    sqlite3* db;
  |    int rc;
  |    rc = sqlite3_open(":memory:", &db);
  |    if (rc != SQLITE_OK)
  |    {
  |        printf("error 1: %s\n", sqlite3_errmsg(db));
  |    }
  |    const char * sql = "create virtual table foo using rtree(pkid, xmin, xmax, ymin, ymax)";
  |    rc = sqlite3_exec(db, sql, 0, 0, 0);
  |    if (rc != SQLITE_OK)
  |    {
  |        printf("error 2: %s\n", sqlite3_errmsg(db));
  |        sqlite3_close(db);
  |    }
  |    else
  |    {
  |        printf("yes, has rtree!\n");
  |        sqlite3_close(db);
  |        return 0;
  |    }
  |
  |    return -1;
  |}
  |
  |
gcc -o .sconf_temp/conftest_17.o -c -DSHAPE_MEMORY_MAPPED_FILE -DMAPNIK_HAS_DLCFN -DBIGINT -Iinclude -I/usr/local/include -I/usr/local/include/freetype2 -I/usr/local/include/libxml2 -I/usr/include .sconf_temp/conftest_17.c
gcc: not found
scons: Configure: Checking if SQLite supports RTREE... 
scons: Configure: (cached) no

scons: Configure: Checking if gdal is ogr enabled... 
gdal-config --ogr-enabled
yes
scons: Configure: yes

scons: Configure: Checking for gdal-config --libs... 
gdal-config --libs
-L/usr/local/lib -lgdal
scons: Configure: yes

scons: Configure: Checking for gdal-config --cflags... 
gdal-config --cflags
-I/usr/local/include
scons: Configure: yes

scons: Configure: Checking for name of ogr library... 
gdal-config --libs
-L/usr/local/lib -lgdal
scons: Configure: gdal

scons: Configure: Checking for C++ library gdal... 
.sconf_temp/conftest_22.cpp <-
  |
  |
  |#include "ogrsf_frmts.h"
  |
  |int
  |main() {
  |  
  |return 0;
  |}
  |
/usr/local/bin/clang++36 -o .sconf_temp/conftest_22.o -c -std=c++11 -DSHAPE_MEMORY_MAPPED_FILE -DMAPNIK_HAS_DLCFN -DBIGINT -Iinclude -I/usr/local/include -I/usr/local/include/freetype2 -I/usr/local/include/libxml2 -I/usr/include .sconf_temp/conftest_22.cpp
/usr/local/bin/clang++36 -o .sconf_temp/conftest_22 .sconf_temp/conftest_22.o -Lsrc -Lsrc/json -Lsrc/wkt -L/usr/local/lib -L/usr/lib -lpthread -lfreetype -lboost_system -lboost_filesystem -lboost_regex -lboost_program_options -lboost_thread -lgdal -lgdal
scons: Configure: yes

scons: Configure: Checking for gdal-config --libs... 
gdal-config --libs
-L/usr/local/lib -lgdal
scons: Configure: yes

scons: Configure: Checking for gdal-config --cflags... 
gdal-config --cflags
-I/usr/local/include
scons: Configure: yes

scons: Configure: Checking for name of gdal library... 
gdal-config --libs
-L/usr/local/lib -lgdal
scons: Configure: gdal

scons: Configure: Checking for C++ library gdal... 
.sconf_temp/conftest_26.cpp <-
  |
  |
  |#include "gdal_priv.h"
  |
  |int
  |main() {
  |  
  |return 0;
  |}
  |
/usr/local/bin/clang++36 -o .sconf_temp/conftest_26.o -c -std=c++11 -DSHAPE_MEMORY_MAPPED_FILE -DMAPNIK_HAS_DLCFN -DBIGINT -Iinclude -I/usr/local/include -I/usr/local/include/freetype2 -I/usr/local/include/libxml2 -I/usr/include .sconf_temp/conftest_26.cpp
/usr/local/bin/clang++36 -o .sconf_temp/conftest_26 .sconf_temp/conftest_26.o -Lsrc -Lsrc/json -Lsrc/wkt -L/usr/local/lib -L/usr/lib -lpthread -lfreetype -lboost_system -lboost_filesystem -lboost_regex -lboost_program_options -lboost_thread -lgdal -lgdal
scons: Configure: yes

scons: Configure: Checking for pg_config... 
pg_config
BINDIR = /usr/local/bin
DOCDIR = /usr/local/share/doc/postgresql
HTMLDIR = /usr/local/share/doc/postgresql
INCLUDEDIR = /usr/local/include
PKGINCLUDEDIR = /usr/local/include/postgresql
INCLUDEDIR-SERVER = /usr/local/include/postgresql/server
LIBDIR = /usr/local/lib
PKGLIBDIR = /usr/local/lib/postgresql
LOCALEDIR = /usr/local/share/locale
MANDIR = /usr/local/man
SHAREDIR = /usr/local/share/postgresql
SYSCONFDIR = /usr/local/etc/postgresql
PGXS = /usr/local/lib/postgresql/pgxs/src/makefiles/pgxs.mk
CONFIGURE = '--with-libraries=/usr/local/lib' '--with-includes=/usr/local/include' '--enable-thread-safety' '--with-openssl' '--with-libxml' '--enable-nls' '--without-gssapi' '--prefix=/usr/local' '--mandir=/usr/local/man' '--infodir=/usr/local/info/' '--build=amd64-portbld-freebsd10.1' 'build_alias=amd64-portbld-freebsd10.1' 'CC=clang' 'CFLAGS=-O2 -pipe   -O3 -funroll-loops -fstack-protector -fno-strict-aliasing' 'LDFLAGS= -L/usr/local/lib -pthread -Wl,-rpath,/usr/local/lib -fstack-protector' 'LIBS=' 'CPPFLAGS=' 'CPP=cpp' 'LDFLAGS_SL='
CC = clang
CPPFLAGS = -I/usr/local/include/libxml2 -I/usr/include -I/usr/local/include -I/usr/local/include
CFLAGS = -O2 -pipe   -O3 -funroll-loops -fstack-protector -fno-strict-aliasing -Wall -Wmissing-prototypes -Wpointer-arith -Wdeclaration-after-statement -Wendif-labels -Wmissing-format-attribute -Wformat-security -fno-strict-aliasing -fwrapv
CFLAGS_SL = -fPIC -DPIC
LDFLAGS = -L../../../src/common -L/usr/local/lib -pthread -Wl,-rpath,/usr/local/lib -fstack-protector -L/usr/local/lib -L/usr/lib -L/usr/local/lib -Wl,--as-needed -Wl,-R'/usr/local/lib'
LDFLAGS_EX = 
LDFLAGS_SL = 
LIBS = -lpgport -lpgcommon -lintl -lxml2 -lssl -lcrypto -lz -lreadline -lcrypt -lm 
VERSION = PostgreSQL 9.3.6
scons: Configure: yes

scons: Configure: Checking for pg_config... 
pg_config
BINDIR = /usr/local/bin
DOCDIR = /usr/local/share/doc/postgresql
HTMLDIR = /usr/local/share/doc/postgresql
INCLUDEDIR = /usr/local/include
PKGINCLUDEDIR = /usr/local/include/postgresql
INCLUDEDIR-SERVER = /usr/local/include/postgresql/server
LIBDIR = /usr/local/lib
PKGLIBDIR = /usr/local/lib/postgresql
LOCALEDIR = /usr/local/share/locale
MANDIR = /usr/local/man
SHAREDIR = /usr/local/share/postgresql
SYSCONFDIR = /usr/local/etc/postgresql
PGXS = /usr/local/lib/postgresql/pgxs/src/makefiles/pgxs.mk
CONFIGURE = '--with-libraries=/usr/local/lib' '--with-includes=/usr/local/include' '--enable-thread-safety' '--with-openssl' '--with-libxml' '--enable-nls' '--without-gssapi' '--prefix=/usr/local' '--mandir=/usr/local/man' '--infodir=/usr/local/info/' '--build=amd64-portbld-freebsd10.1' 'build_alias=amd64-portbld-freebsd10.1' 'CC=clang' 'CFLAGS=-O2 -pipe   -O3 -funroll-loops -fstack-protector -fno-strict-aliasing' 'LDFLAGS= -L/usr/local/lib -pthread -Wl,-rpath,/usr/local/lib -fstack-protector' 'LIBS=' 'CPPFLAGS=' 'CPP=cpp' 'LDFLAGS_SL='
CC = clang
CPPFLAGS = -I/usr/local/include/libxml2 -I/usr/include -I/usr/local/include -I/usr/local/include
CFLAGS = -O2 -pipe   -O3 -funroll-loops -fstack-protector -fno-strict-aliasing -Wall -Wmissing-prototypes -Wpointer-arith -Wdeclaration-after-statement -Wendif-labels -Wmissing-format-attribute -Wformat-security -fno-strict-aliasing -fwrapv
CFLAGS_SL = -fPIC -DPIC
LDFLAGS = -L../../../src/common -L/usr/local/lib -pthread -Wl,-rpath,/usr/local/lib -fstack-protector -L/usr/local/lib -L/usr/lib -L/usr/local/lib -Wl,--as-needed -Wl,-R'/usr/local/lib'
LDFLAGS_EX = 
LDFLAGS_SL = 
LIBS = -lpgport -lpgcommon -lintl -lxml2 -lssl -lcrypto -lz -lreadline -lcrypt -lm 
VERSION = PostgreSQL 9.3.6
scons: Configure: yes

scons: Configure: Checking for cairo... 
pkg-config --exists 'cairo'
scons: Configure: yes

scons: Configure: Checking for cairo freetype font support ... 
.sconf_temp/conftest_30.cpp <-
  |
  |
  |#include <cairo-features.h>
  |
  |int main()
  |{
  |    #ifdef CAIRO_HAS_FT_FONT
  |    return 0;
  |    #else
  |    return 1;
  |    #endif
  |}
  |
  |
/usr/local/bin/clang++36 -o .sconf_temp/conftest_30.o -c -std=c++11 -DSHAPE_MEMORY_MAPPED_FILE -DMAPNIK_HAS_DLCFN -DBIGINT -Ideps -Ideps/clipper/include -Ideps/agg/include -Iinclude -I/usr/local/include -I/usr/local/include/freetype2 -I/usr/local/include/libxml2 -I/usr/include -I/usr/local/include/cairo -I/usr/local/include/glib-2.0 -I/usr/local/lib/glib-2.0/include -I/usr/local/include/pixman-1 -I/usr/local/include/libpng16 .sconf_temp/conftest_30.cpp
/usr/local/bin/clang++36 -o .sconf_temp/conftest_30 .sconf_temp/conftest_30.o -Ldeps/agg -Lsrc -Lsrc/json -Lsrc/wkt -L/usr/local/lib -L/usr/lib -lpthread -lfreetype -lboost_system -lboost_filesystem -lboost_regex -lboost_program_options -lboost_thread -lgdal -lgdal -lpq -lpq
.sconf_temp/conftest_30 > .sconf_temp/conftest_30.out
scons: Configure: yes

scons: Configure: Checking for C++ header file boost/python/detail/config.hpp... 
.sconf_temp/conftest_31.cpp <-
  |
  |#include <boost/python/detail/config.hpp>
  |
  |
/usr/local/bin/clang++36 -o .sconf_temp/conftest_31.o -c -std=c++11 -DSHAPE_MEMORY_MAPPED_FILE -DMAPNIK_HAS_DLCFN -DBIGINT -Ideps -Ideps/clipper/include -Ideps/agg/include -Iinclude -I/usr/local/include -I/usr/local/include/freetype2 -I/usr/local/include/libxml2 -I/usr/include .sconf_temp/conftest_31.cpp
scons: Configure: yes

scons: Configure: Checking for pycairo... 
pkg-config --exists 'pycairo'
scons: Configure: yes