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PhilipVinc/compilation.log

Created January 31, 2020 14:00
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compilation.log
(netket) [vicentinif@master0 netket]$ mkdir build
(netket) [vicentinif@master0 netket]$ cd build/
(netket) [vicentinif@master0 build]$ ls
(netket) [vicentinif@master0 build]$ cmake .
CMake Error: The source directory "/home/vicentinif/netket_compile/netket/build" does not appear to contain CMakeLists.txt.
Specify --help for usage, or press the help button on the CMake GUI.
(netket) [vicentinif@master0 build]$ cmake ..
-- The C compiler identification is GNU 7.3.0
-- The CXX compiler identification is GNU 7.3.0
-- Check for working C compiler: /home/vicentinif/.conda/envs/netket/bin/x86_64-conda_cos6-linux-gnu-cc
-- Check for working C compiler: /home/vicentinif/.conda/envs/netket/bin/x86_64-conda_cos6-linux-gnu-cc -- works
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
-- Detecting C compile features
-- Detecting C compile features - done
-- Check for working CXX compiler: /home/vicentinif/.conda/envs/netket/bin/x86_64-conda_cos6-linux-gnu-c++
-- Check for working CXX compiler: /home/vicentinif/.conda/envs/netket/bin/x86_64-conda_cos6-linux-gnu-c++ -- works
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
-- Detecting CXX compile features
-- Detecting CXX compile features - done
-- [NetKet] CMAKE_BUILD_TYPE not specified, setting it to Release. Use `-DCMAKE_BUILD_TYPE=...` to overwrite.
-- Found PythonInterp: /home/vicentinif/.conda/envs/netket/bin/python3.7 (found version "3.7.6")
-- Found PythonLibs: /home/vicentinif/.conda/envs/netket/lib/libpython3.7m.so
-- Found MPI_C: /home/vicentinif/.conda/envs/netket/lib/libmpi.so (found version "3.1")
-- Found MPI_CXX: /home/vicentinif/.conda/envs/netket/lib/libmpicxx.so (found version "3.1")
-- Found MPI: TRUE (found version "3.1")
-- Looking for sgemm_
-- Looking for sgemm_ - not found
-- Looking for pthread.h
-- Looking for pthread.h - found
-- Performing Test CMAKE_HAVE_LIBC_PTHREAD
-- Performing Test CMAKE_HAVE_LIBC_PTHREAD - Failed
-- Looking for pthread_create in pthreads
-- Looking for pthread_create in pthreads - not found
-- Looking for pthread_create in pthread
-- Looking for pthread_create in pthread - found
-- Found Threads: TRUE
-- Looking for sgemm_
-- Looking for sgemm_ - found
-- Found BLAS: /opt/intel/composer_xe_2015.0.090/mkl/lib/intel64/libmkl_intel_lp64.so;/opt/intel/composer_xe_2015.0.090/mkl/lib/intel64/libmkl_intel_thread.so;/opt/intel/composer_xe_2015.0.090/mkl/lib/intel64/libmkl_core.so;/opt/intel/composer_xe_2015.0.090/compiler/lib/intel64/libiomp5.so;-lpthread;-lm;-ldl
-- Looking for cheev_
-- Looking for cheev_ - found
-- A library with LAPACK API found.
-- A cache variable, namely LAPACKE_DIR, has been set to specify the install directory of LAPACKE
-- Looking for LAPACKE_dgeqrf
-- Looking for LAPACKE_dgeqrf - found
-- Looking for lapacke: test with lapack succeeds
-- Found LAPACKE: /opt/intel/composer_xe_2015.0.090/mkl/lib/intel64/libmkl_intel_lp64.so;/opt/intel/composer_xe_2015.0.090/mkl/lib/intel64/libmkl_intel_thread.so;/opt/intel/composer_xe_2015.0.090/mkl/lib/intel64/libmkl_core.so;/opt/intel/composer_xe_2015.0.090/compiler/lib/intel64/libiomp5.so;-lpthread;-lm;-ldl
Found LAPACKE.
-- Configuring done
-- Generating done
-- Build files have been written to: /home/vicentinif/netket_compile/netket/build
(netket) [vicentinif@master0 build]$ make
Scanning dependencies of target eigen_project
[ 1%] Creating directories for 'eigen_project'
[ 2%] Performing download step (download, verify and extract) for 'eigen_project'
-- Downloading...
dst='/home/vicentinif/netket_compile/netket/build/eigen_project-prefix/src/3.3.7.tar.gz'
timeout='none'
-- Using src='https://github.com/eigenteam/eigen-git-mirror/archive/3.3.7.tar.gz'
-- verifying file...
file='/home/vicentinif/netket_compile/netket/build/eigen_project-prefix/src/3.3.7.tar.gz'
-- Downloading... done
-- extracting...
src='/home/vicentinif/netket_compile/netket/build/eigen_project-prefix/src/3.3.7.tar.gz'
dst='/home/vicentinif/netket_compile/netket/build/External/Eigen3'
-- extracting... [tar xfz]
-- extracting... [analysis]
-- extracting... [rename]
-- extracting... [clean up]
-- extracting... done
[ 3%] No patch step for 'eigen_project'
[ 4%] No update step for 'eigen_project'
[ 5%] No configure step for 'eigen_project'
[ 6%] No build step for 'eigen_project'
[ 8%] No install step for 'eigen_project'
[ 9%] Completed 'eigen_project'
[ 9%] Built target eigen_project
Scanning dependencies of target sleef_project
[ 10%] Creating directories for 'sleef_project'
[ 11%] Performing download step (download, verify and extract) for 'sleef_project'
-- Downloading...
dst='/home/vicentinif/netket_compile/netket/build/sleef_project-prefix/src/3.4.0.tar.gz'
timeout='none'
-- Using src='https://github.com/shibatch/sleef/archive/3.4.0.tar.gz'
-- verifying file...
file='/home/vicentinif/netket_compile/netket/build/sleef_project-prefix/src/3.4.0.tar.gz'
-- Downloading... done
-- extracting...
src='/home/vicentinif/netket_compile/netket/build/sleef_project-prefix/src/3.4.0.tar.gz'
dst='/home/vicentinif/netket_compile/netket/build/External/sleef'
-- extracting... [tar xfz]
-- extracting... [analysis]
-- extracting... [rename]
-- extracting... [clean up]
-- extracting... done
[ 12%] No patch step for 'sleef_project'
[ 13%] No update step for 'sleef_project'
[ 14%] Performing configure step for 'sleef_project'
CMake Deprecation Warning at CMakeLists.txt:20 (cmake_policy):
The OLD behavior for policy CMP0066 will be removed from a future version
of CMake.
The cmake-policies(7) manual explains that the OLD behaviors of all
policies are deprecated and that a policy should be set to OLD only under
specific short-term circumstances. Projects should be ported to the NEW
behavior and not rely on setting a policy to OLD.
-- The C compiler identification is GNU 7.3.0
-- Check for working C compiler: /home/vicentinif/.conda/envs/netket/bin/x86_64-conda_cos6-linux-gnu-cc
-- Check for working C compiler: /home/vicentinif/.conda/envs/netket/bin/x86_64-conda_cos6-linux-gnu-cc -- works
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
-- Detecting C compile features
-- Detecting C compile features - done
-- Found OpenSSL: /home/vicentinif/.conda/envs/netket/lib/libcrypto.so (found version "1.1.1d")
-- Looking for sys/types.h
-- Looking for sys/types.h - found
-- Looking for stdint.h
-- Looking for stdint.h - found
-- Looking for stddef.h
-- Looking for stddef.h - found
-- Check size of long double
-- Check size of long double - done
-- Performing Test COMPILER_SUPPORTS_LONG_DOUBLE
-- Performing Test COMPILER_SUPPORTS_LONG_DOUBLE - Success
-- Performing Test COMPILER_SUPPORTS_FLOAT128
-- Performing Test COMPILER_SUPPORTS_FLOAT128 - Success
-- Performing Test COMPILER_SUPPORTS_SSE2
-- Performing Test COMPILER_SUPPORTS_SSE2 - Success
-- Performing Test COMPILER_SUPPORTS_SSE4
-- Performing Test COMPILER_SUPPORTS_SSE4 - Success
-- Performing Test COMPILER_SUPPORTS_AVX
-- Performing Test COMPILER_SUPPORTS_AVX - Success
-- Performing Test COMPILER_SUPPORTS_FMA4
-- Performing Test COMPILER_SUPPORTS_FMA4 - Success
-- Performing Test COMPILER_SUPPORTS_AVX2
-- Performing Test COMPILER_SUPPORTS_AVX2 - Success
-- Performing Test COMPILER_SUPPORTS_AVX512F
-- Performing Test COMPILER_SUPPORTS_AVX512F - Success
-- Found OpenMP_C: -fopenmp (found version "4.5")
-- Found OpenMP: TRUE (found version "4.5")
-- Performing Test COMPILER_SUPPORTS_OPENMP
-- Performing Test COMPILER_SUPPORTS_OPENMP - Success
-- Performing Test COMPILER_SUPPORTS_WEAK_ALIASES
-- Performing Test COMPILER_SUPPORTS_WEAK_ALIASES - Success
-- Performing Test COMPILER_SUPPORTS_BUILTIN_MATH
-- Performing Test COMPILER_SUPPORTS_BUILTIN_MATH - Success
-- Performing Test COMPILER_SUPPORTS_SYS_GETRANDOM
-- Performing Test COMPILER_SUPPORTS_SYS_GETRANDOM - Failed
-- Configuring build for SLEEF-v3.4.0
Target system: Linux-2.6.32-504.1.3.el6.x86_64
Target processor: x86_64
Host system: Linux-2.6.32-504.1.3.el6.x86_64
Host processor: x86_64
Detected C compiler: GNU @ /home/vicentinif/.conda/envs/netket/bin/x86_64-conda_cos6-linux-gnu-cc
-- Using option `-Wall -Wno-unused -Wno-attributes -Wno-unused-result -Wno-psabi -ffp-contract=off -fno-math-errno -fno-trapping-math` to compile libsleef
-- Building shared libs : OFF
-- MPFR : LIB_MPFR-NOTFOUND
-- GMP : LIBGMP-NOTFOUND
-- RT : /home/vicentinif/.conda/envs/netket/x86_64-conda_cos6-linux-gnu/sysroot/usr/lib/librt.so
-- FFTW3 : /usr/local/lib/libfftw3.a
-- OPENSSL : 1.1.1d
-- SDE : SDE_COMMAND-NOTFOUND
-- RUNNING_ON_TRAVIS : 0
-- COMPILER_SUPPORTS_OPENMP : 1
-- Configuring done
-- Generating done
-- Build files have been written to: /home/vicentinif/netket_compile/netket/build/sleef_project-prefix/src/sleef_project-build
[ 16%] Performing build step for 'sleef_project'
Scanning dependencies of target mkrename
[ 1%] Building C object src/libm/CMakeFiles/mkrename.dir/mkrename.c.o
[ 1%] Linking C executable ../../bin/mkrename
[ 1%] Built target mkrename
Scanning dependencies of target renameAVX2.h_generated
[ 2%] Generating include/renameavx2.h
Generating renameavx2.h: mkrename finz_ 4 8 avx2
[ 2%] Built target renameAVX2.h_generated
Scanning dependencies of target sleefavx2
[ 3%] Building C object src/libm/CMakeFiles/sleefavx2.dir/sleefsimdsp.c.o
[ 4%] Building C object src/libm/CMakeFiles/sleefavx2.dir/sleefsimddp.c.o
[ 5%] Built target sleefavx2
Scanning dependencies of target renameSSE2.h_generated
[ 6%] Generating include/renamesse2.h
Generating renamesse2.h: mkrename cinz_ 2 4 sse2
[ 6%] Built target renameSSE2.h_generated
Scanning dependencies of target sleefdetsse2
[ 7%] Building C object src/libm/CMakeFiles/sleefdetsse2.dir/sleefsimdsp.c.o
[ 8%] Building C object src/libm/CMakeFiles/sleefdetsse2.dir/sleefsimddp.c.o
[ 9%] Built target sleefdetsse2
Scanning dependencies of target renameAVX512FNOFMA.h_generated
[ 10%] Generating include/renameavx512fnofma.h
Generating renameavx512fnofma.h: mkrename cinz_ 8 16 avx512fnofma
[ 10%] Built target renameAVX512FNOFMA.h_generated
Scanning dependencies of target sleefavx512fnofma
[ 11%] Building C object src/libm/CMakeFiles/sleefavx512fnofma.dir/sleefsimdsp.c.o
[ 12%] Building C object src/libm/CMakeFiles/sleefavx512fnofma.dir/sleefsimddp.c.o
[ 13%] Built target sleefavx512fnofma
Scanning dependencies of target renameAVX.h_generated
[ 14%] Generating include/renameavx.h
Generating renameavx.h: mkrename cinz_ 4 8 avx
[ 14%] Built target renameAVX.h_generated
Scanning dependencies of target sleefdetavx
[ 15%] Building C object src/libm/CMakeFiles/sleefdetavx.dir/sleefsimdsp.c.o
[ 16%] Building C object src/libm/CMakeFiles/sleefdetavx.dir/sleefsimddp.c.o
[ 17%] Built target sleefdetavx
Scanning dependencies of target renameAVX512F.h_generated
[ 18%] Generating include/renameavx512f.h
Generating renameavx512f.h: mkrename finz_ 8 16 avx512f
[ 18%] Built target renameAVX512F.h_generated
Scanning dependencies of target mkalias
[ 19%] Building C object src/libm/CMakeFiles/mkalias.dir/mkalias.c.o
[ 20%] Linking C executable ../../bin/mkalias
[ 20%] Built target mkalias
Scanning dependencies of target alias_avx512f.h_generated
[ 20%] Generating alias_avx512f.h
[ 20%] Built target alias_avx512f.h_generated
Scanning dependencies of target sleefdetavx512f
[ 21%] Building C object src/libm/CMakeFiles/sleefdetavx512f.dir/sleefsimdsp.c.o
[ 22%] Building C object src/libm/CMakeFiles/sleefdetavx512f.dir/sleefsimddp.c.o
[ 23%] Built target sleefdetavx512f
Scanning dependencies of target sleefdetavx512fnofma
[ 24%] Building C object src/libm/CMakeFiles/sleefdetavx512fnofma.dir/sleefsimdsp.c.o
[ 25%] Building C object src/libm/CMakeFiles/sleefdetavx512fnofma.dir/sleefsimddp.c.o
[ 26%] Built target sleefdetavx512fnofma
Scanning dependencies of target renamePUREC_SCALAR.h_generated
[ 27%] Generating include/renamepurec_scalar.h
Generating renamepurec_scalar.h: mkrename cinz_ 1 1 purec
[ 27%] Built target renamePUREC_SCALAR.h_generated
Scanning dependencies of target sleefdetpurec_scalar
[ 28%] Building C object src/libm/CMakeFiles/sleefdetpurec_scalar.dir/sleefsimdsp.c.o
[ 29%] Building C object src/libm/CMakeFiles/sleefdetpurec_scalar.dir/sleefsimddp.c.o
[ 29%] Built target sleefdetpurec_scalar
Scanning dependencies of target mkdisp
[ 30%] Building C object src/libm/CMakeFiles/mkdisp.dir/mkdisp.c.o
[ 31%] Linking C executable ../../bin/mkdisp
[ 31%] Built target mkdisp
Scanning dependencies of target renameAVX2128.h_generated
[ 32%] Generating include/renameavx2128.h
Generating renameavx2128.h: mkrename finz_ 2 4 avx2128
[ 32%] Built target renameAVX2128.h_generated
Scanning dependencies of target sleefdetavx2128
[ 33%] Building C object src/libm/CMakeFiles/sleefdetavx2128.dir/sleefsimdsp.c.o
[ 34%] Building C object src/libm/CMakeFiles/sleefdetavx2128.dir/sleefsimddp.c.o
[ 35%] Built target sleefdetavx2128
Scanning dependencies of target renameFMA4.h_generated
[ 36%] Generating include/renamefma4.h
Generating renamefma4.h: mkrename finz_ 4 8 fma4
[ 36%] Built target renameFMA4.h_generated
Scanning dependencies of target sleefdetfma4
[ 37%] Building C object src/libm/CMakeFiles/sleefdetfma4.dir/sleefsimdsp.c.o
[ 38%] Building C object src/libm/CMakeFiles/sleefdetfma4.dir/sleefsimddp.c.o
[ 39%] Built target sleefdetfma4
Scanning dependencies of target renamedsp128.h_generated
[ 39%] Generating renamedsp128.h
[ 39%] Built target renamedsp128.h_generated
Scanning dependencies of target headers
[ 40%] Generating ../../include/sleef.h
Generating sleef.h: mkrename cinz_ 2 4 __m128d __m128 __m128i __m128i __SSE2__
Generating sleef.h: mkrename cinz_ 2 4 __m128d __m128 __m128i __m128i __SSE2__ sse2
Generating sleef.h: mkrename cinz_ 2 4 __m128d __m128 __m128i __m128i __SSE2__ sse4
Generating sleef.h: mkrename cinz_ 4 8 __m256d __m256 __m128i struct\ {\ __m128i\ x,\ y;\ } __AVX__
Generating sleef.h: mkrename cinz_ 4 8 __m256d __m256 __m128i struct\ {\ __m128i\ x,\ y;\ } __AVX__ avx
Generating sleef.h: mkrename finz_ 4 8 __m256d __m256 __m128i struct\ {\ __m128i\ x,\ y;\ } __AVX__ fma4
Generating sleef.h: mkrename finz_ 4 8 __m256d __m256 __m128i __m256i __AVX__ avx2
Generating sleef.h: mkrename finz_ 2 4 __m128d __m128 __m128i __m128i __SSE2__ avx2128
Generating sleef.h: mkrename finz_ 8 16 __m512d __m512 __m256i __m512i __AVX512F__
Generating sleef.h: mkrename finz_ 8 16 __m512d __m512 __m256i __m512i __AVX512F__ avx512f
Generating sleef.h: mkrename cinz_ 8 16 __m512d __m512 __m256i __m512i __AVX512F__ avx512fnofma
Generating sleef.h: mkrename cinz_ 1 1 double float int32_t int32_t __STDC__ purec
Generating sleef.h: mkrename finz_ 1 1 double float int32_t int32_t FP_FAST_FMA purecfma
[ 41%] Generating include/renamesse4.h
Generating renamesse4.h: mkrename cinz_ 2 4 sse4
[ 42%] Generating include/renamepurecfma_scalar.h
Generating renamepurecfma_scalar.h: mkrename finz_ 1 1 purecfma
[ 49%] Built target headers
Scanning dependencies of target dispsse.c_generated
[ 50%] Generating dispsse.c
[ 50%] Built target dispsse.c_generated
Scanning dependencies of target dispsse_obj
[ 51%] Building C object src/libm/CMakeFiles/dispsse_obj.dir/dispsse.c.o
[ 52%] Built target dispsse_obj
Scanning dependencies of target sleefavx512f
[ 53%] Building C object src/libm/CMakeFiles/sleefavx512f.dir/sleefsimdsp.c.o
[ 54%] Building C object src/libm/CMakeFiles/sleefavx512f.dir/sleefsimddp.c.o
[ 55%] Built target sleefavx512f
Scanning dependencies of target renameSSE4.h_generated
[ 56%] Built target renameSSE4.h_generated
Scanning dependencies of target sleefdetsse4
[ 57%] Building C object src/libm/CMakeFiles/sleefdetsse4.dir/sleefsimdsp.c.o
[ 58%] Building C object src/libm/CMakeFiles/sleefdetsse4.dir/sleefsimddp.c.o
[ 59%] Built target sleefdetsse4
Scanning dependencies of target common
[ 60%] Building C object src/common/CMakeFiles/common.dir/common.c.o
[ 60%] Built target common
Scanning dependencies of target sleefavx2128
[ 61%] Building C object src/libm/CMakeFiles/sleefavx2128.dir/sleefsimdsp.c.o
[ 62%] Building C object src/libm/CMakeFiles/sleefavx2128.dir/sleefsimddp.c.o
[ 62%] Built target sleefavx2128
Scanning dependencies of target sleefdetavx2
[ 62%] Building C object src/libm/CMakeFiles/sleefdetavx2.dir/sleefsimdsp.c.o
[ 63%] Building C object src/libm/CMakeFiles/sleefdetavx2.dir/sleefsimddp.c.o
[ 64%] Built target sleefdetavx2
Scanning dependencies of target sleefsse4
[ 65%] Building C object src/libm/CMakeFiles/sleefsse4.dir/sleefsimdsp.c.o
[ 66%] Building C object src/libm/CMakeFiles/sleefsse4.dir/sleefsimddp.c.o
[ 67%] Built target sleefsse4
Scanning dependencies of target sleeffma4
[ 67%] Building C object src/libm/CMakeFiles/sleeffma4.dir/sleefsimdsp.c.o
[ 68%] Building C object src/libm/CMakeFiles/sleeffma4.dir/sleefsimddp.c.o
[ 69%] Built target sleeffma4
Scanning dependencies of target sleefavx
[ 70%] Building C object src/libm/CMakeFiles/sleefavx.dir/sleefsimdsp.c.o
[ 71%] Building C object src/libm/CMakeFiles/sleefavx.dir/sleefsimddp.c.o
[ 72%] Built target sleefavx
Scanning dependencies of target sleefsse2
[ 73%] Building C object src/libm/CMakeFiles/sleefsse2.dir/sleefsimdsp.c.o
[ 74%] Building C object src/libm/CMakeFiles/sleefsse2.dir/sleefsimddp.c.o
[ 75%] Built target sleefsse2
Scanning dependencies of target sleefpurec_scalar
[ 76%] Building C object src/libm/CMakeFiles/sleefpurec_scalar.dir/sleefsimdsp.c.o
[ 77%] Building C object src/libm/CMakeFiles/sleefpurec_scalar.dir/sleefsimddp.c.o
[ 78%] Built target sleefpurec_scalar
Scanning dependencies of target renamePURECFMA_SCALAR.h_generated
[ 79%] Built target renamePURECFMA_SCALAR.h_generated
Scanning dependencies of target sleefpurecfma_scalar
[ 80%] Building C object src/libm/CMakeFiles/sleefpurecfma_scalar.dir/sleefsimdsp.c.o
[ 81%] Building C object src/libm/CMakeFiles/sleefpurecfma_scalar.dir/sleefsimddp.c.o
[ 82%] Built target sleefpurecfma_scalar
Scanning dependencies of target sleefdetpurecfma_scalar
[ 83%] Building C object src/libm/CMakeFiles/sleefdetpurecfma_scalar.dir/sleefsimdsp.c.o
[ 84%] Building C object src/libm/CMakeFiles/sleefdetpurecfma_scalar.dir/sleefsimddp.c.o
[ 85%] Built target sleefdetpurecfma_scalar
Scanning dependencies of target renamedsp256.h_generated
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[ 86%] Built target renamedsp256.h_generated
Scanning dependencies of target dispavx.c_generated
[ 87%] Generating dispavx.c
[ 87%] Built target dispavx.c_generated
Scanning dependencies of target dispavx_obj
[ 88%] Building C object src/libm/CMakeFiles/dispavx_obj.dir/dispavx.c.o
[ 89%] Built target dispavx_obj
Scanning dependencies of target sleef
[ 90%] Building C object src/libm/CMakeFiles/sleef.dir/sleefdp.c.o
[ 91%] Building C object src/libm/CMakeFiles/sleef.dir/sleefsp.c.o
[ 92%] Building C object src/libm/CMakeFiles/sleef.dir/rempitab.c.o
[ 93%] Building C object src/libm/CMakeFiles/sleef.dir/sleefld.c.o
[ 94%] Building C object src/libm/CMakeFiles/sleef.dir/sleefqp.c.o
[ 95%] Linking C static library ../../lib/libsleef.a
[ 95%] Built target sleef
Scanning dependencies of target mkrename_gnuabi
[ 96%] Building C object src/libm/CMakeFiles/mkrename_gnuabi.dir/mkrename_gnuabi.c.o
[ 97%] Linking C executable ../../bin/mkrename_gnuabi
[ 97%] Built target mkrename_gnuabi
Scanning dependencies of target mkmasked_gnuabi
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[ 99%] Linking C executable ../../bin/mkmasked_gnuabi
[ 99%] Built target mkmasked_gnuabi
Scanning dependencies of target arraymap
[100%] Building C object src/common/CMakeFiles/arraymap.dir/arraymap.c.o
[100%] Built target arraymap
[ 17%] No install step for 'sleef_project'
[ 18%] Completed 'sleef_project'
[ 18%] Built target sleef_project
Scanning dependencies of target log_cosh_avx2
[ 19%] Building CXX object CMakeFiles/log_cosh_avx2.dir/Sources/Utils/log_cosh_avx2.cc.o
In file included from /home/vicentinif/netket_compile/netket/Sources/Utils/log_cosh_avx2.cc:15:0:
/home/vicentinif/netket_compile/netket/Sources/Utils/log_cosh.hpp:92:0: warning: ignoring #pragma omp parallel [-Wunknown-pragmas]
#pragma omp parallel for schedule(static)
/home/vicentinif/netket_compile/netket/Sources/Utils/log_cosh.hpp:100:0: warning: ignoring #pragma omp parallel [-Wunknown-pragmas]
#pragma omp parallel for schedule(static)
/home/vicentinif/netket_compile/netket/Sources/Utils/log_cosh.hpp:111:0: warning: ignoring #pragma omp parallel [-Wunknown-pragmas]
#pragma omp parallel for schedule(static)
/home/vicentinif/netket_compile/netket/Sources/Utils/log_cosh_avx2.cc:24:34: warning: ignoring attributes on template argument '__m256d {aka __vector(4) double}' [-Wignored-attributes]
inline std::pair<__m256d, __m256d> clog(__m256d const x,
^
/home/vicentinif/netket_compile/netket/Sources/Utils/log_cosh_avx2.cc:24:34: warning: ignoring attributes on template argument '__m256d {aka __vector(4) double}' [-Wignored-attributes]
/home/vicentinif/netket_compile/netket/Sources/Utils/log_cosh_avx2.cc:33:34: warning: ignoring attributes on template argument '__m256d {aka __vector(4) double}' [-Wignored-attributes]
inline std::pair<__m256d, __m256d> LogCosh(__m256d x, __m256d y) noexcept {
^
/home/vicentinif/netket_compile/netket/Sources/Utils/log_cosh_avx2.cc:33:34: warning: ignoring attributes on template argument '__m256d {aka __vector(4) double}' [-Wignored-attributes]
[ 19%] Built target log_cosh_avx2
Scanning dependencies of target json_project
[ 20%] Creating directories for 'json_project'
[ 21%] Performing download step (download, verify and extract) for 'json_project'
-- Downloading...
dst='/home/vicentinif/netket_compile/netket/build/json_project-prefix/src/include.zip'
timeout='none'
-- Using src='https://github.com/nlohmann/json/releases/download/v3.6.1/include.zip'
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file='/home/vicentinif/netket_compile/netket/build/json_project-prefix/src/include.zip'
-- Downloading... done
-- extracting...
src='/home/vicentinif/netket_compile/netket/build/json_project-prefix/src/include.zip'
dst='/home/vicentinif/netket_compile/netket/build/External/json/include'
-- extracting... [tar xfz]
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[ 22%] No patch step for 'json_project'
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[ 26%] No build step for 'json_project'
[ 27%] No install step for 'json_project'
[ 28%] Completed 'json_project'
[ 28%] Built target json_project
Scanning dependencies of target pybind11_project
[ 29%] Creating directories for 'pybind11_project'
[ 31%] Performing download step (download, verify and extract) for 'pybind11_project'
-- Downloading...
dst='/home/vicentinif/netket_compile/netket/build/pybind11_project-prefix/src/v2.3.0.tar.gz'
timeout='none'
-- Using src='https://github.com/pybind/pybind11/archive/v2.3.0.tar.gz'
-- verifying file...
file='/home/vicentinif/netket_compile/netket/build/pybind11_project-prefix/src/v2.3.0.tar.gz'
-- Downloading... done
-- extracting...
src='/home/vicentinif/netket_compile/netket/build/pybind11_project-prefix/src/v2.3.0.tar.gz'
dst='/home/vicentinif/netket_compile/netket/build/External/pybind11'
-- extracting... [tar xfz]
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[ 32%] No patch step for 'pybind11_project'
[ 33%] No update step for 'pybind11_project'
[ 34%] No configure step for 'pybind11_project'
[ 35%] No build step for 'pybind11_project'
[ 36%] No install step for 'pybind11_project'
[ 37%] Completed 'pybind11_project'
[ 37%] Built target pybind11_project
Scanning dependencies of target netket
[ 39%] Building CXX object CMakeFiles/netket.dir/Sources/pynetket.cc.o
In file included from /home/vicentinif/netket_compile/netket/Sources/Utils/all_utils.hpp:21:0,
from /home/vicentinif/netket_compile/netket/Sources/Machine/Layers/activation_layer.hpp:23,
from /home/vicentinif/netket_compile/netket/Sources/Machine/Layers/layer.hpp:19,
from /home/vicentinif/netket_compile/netket/Sources/Machine/ffnn.hpp:26,
from /home/vicentinif/netket_compile/netket/Sources/Machine/machine.hpp:24,
from /home/vicentinif/netket_compile/netket/Sources/netket.hpp:22,
from /home/vicentinif/netket_compile/netket/Sources/pynetket.cc:18:
/home/vicentinif/netket_compile/netket/Sources/Utils/log_cosh.hpp:92:0: warning: ignoring #pragma omp parallel [-Wunknown-pragmas]
#pragma omp parallel for schedule(static)
/home/vicentinif/netket_compile/netket/Sources/Utils/log_cosh.hpp:100:0: warning: ignoring #pragma omp parallel [-Wunknown-pragmas]
#pragma omp parallel for schedule(static)
/home/vicentinif/netket_compile/netket/Sources/Utils/log_cosh.hpp:111:0: warning: ignoring #pragma omp parallel [-Wunknown-pragmas]
#pragma omp parallel for schedule(static)
In file included from /home/vicentinif/netket_compile/netket/Sources/Utils/all_utils.hpp:28:0,
from /home/vicentinif/netket_compile/netket/Sources/Machine/Layers/activation_layer.hpp:23,
from /home/vicentinif/netket_compile/netket/Sources/Machine/Layers/layer.hpp:19,
from /home/vicentinif/netket_compile/netket/Sources/Machine/ffnn.hpp:26,
from /home/vicentinif/netket_compile/netket/Sources/Machine/machine.hpp:24,
from /home/vicentinif/netket_compile/netket/Sources/netket.hpp:22,
from /home/vicentinif/netket_compile/netket/Sources/pynetket.cc:18:
/home/vicentinif/netket_compile/netket/Sources/Utils/stopwatch.hpp: In member function 'void netket::Stopwatch::print_elapsed(std::ostream&)':
/home/vicentinif/netket_compile/netket/Sources/Utils/stopwatch.hpp:24:10: warning: declaration of 'elapsed' shadows a member of 'netket::Stopwatch' [-Wshadow]
auto elapsed = std::chrono::duration_cast<Duration>(Clock::now() - start_);
^~~~~~~
/home/vicentinif/netket_compile/netket/Sources/Utils/stopwatch.hpp:18:12: note: shadowed declaration is here
Duration elapsed() {
^~~~~~~
In file included from /home/vicentinif/.conda/envs/netket/x86_64-conda_cos6-linux-gnu/include/c++/7.3.0/complex.h:36:0,
from /home/vicentinif/netket_compile/netket/build/External/Eigen3/Eigen/src/misc/lapacke.h:79,
from /home/vicentinif/netket_compile/netket/build/External/Eigen3/Eigen/LU:34,
from /home/vicentinif/netket_compile/netket/build/External/Eigen3/Eigen/Dense:2,
from /home/vicentinif/netket_compile/netket/Sources/Hilbert/hilbert_index.hpp:23,
from /home/vicentinif/netket_compile/netket/Sources/Hilbert/abstract_hilbert.hpp:24,
from /home/vicentinif/netket_compile/netket/Sources/Hilbert/hilbert.hpp:18,
from /home/vicentinif/netket_compile/netket/Sources/netket.hpp:21,
from /home/vicentinif/netket_compile/netket/Sources/pynetket.cc:18:
/home/vicentinif/netket_compile/netket/build/External/pybind11/include/pybind11/detail/common.h: At global scope:
/home/vicentinif/netket_compile/netket/build/External/pybind11/include/pybind11/detail/common.h:468:35: error: expected ')' before '__extension__'
template <size_t... IPrev, size_t I, bool B, bool... Bs> struct select_indices_impl<index_sequence<IPrev...>, I, B, Bs...>
^
/home/vicentinif/netket_compile/netket/build/External/pybind11/include/pybind11/detail/common.h:468:35: error: expected '>' before '__extension__'
/home/vicentinif/netket_compile/netket/build/External/pybind11/include/pybind11/detail/common.h:468:35: error: expected unqualified-id before ')' token
template <size_t... IPrev, size_t I, bool B, bool... Bs> struct select_indices_impl<index_sequence<IPrev...>, I, B, Bs...>
^
In file included from /home/vicentinif/netket_compile/netket/Sources/pynetket.cc:24:0:
/home/vicentinif/netket_compile/netket/Sources/Operator/py_operator.hpp: In lambda function:
/home/vicentinif/netket_compile/netket/Sources/Operator/py_operator.hpp:51:66: warning: declaration of 'op' shadows a previous local [-Wshadow]
py::array_t<double, py::array::c_style> samples) {
^
/home/vicentinif/netket_compile/netket/Sources/Operator/py_operator.hpp:41:8: note: shadowed declaration is here
auto op =
^~
In file included from /home/vicentinif/netket_compile/netket/Sources/Hilbert/abstract_hilbert.hpp:20:0,
from /home/vicentinif/netket_compile/netket/Sources/Hilbert/hilbert.hpp:18,
from /home/vicentinif/netket_compile/netket/Sources/netket.hpp:21,
from /home/vicentinif/netket_compile/netket/Sources/pynetket.cc:18:
/home/vicentinif/netket_compile/netket/build/External/optional-lite/nonstd/optional.hpp: In instantiation of 'void nonstd::optional_lite::detail::storage_t<T>::emplace(Args&& ...) [with Args = {double&, bool&, bool&, bool}; T = netket::SR]':
/home/vicentinif/netket_compile/netket/build/External/optional-lite/nonstd/optional.hpp:1223:9: required from 'T& nonstd::optional_lite::optional<T>::emplace(Args&& ...) [with Args = {double&, bool&, bool&, bool}; <template-parameter-2-2> = nonstd::optional_lite::detail::enabler; T = netket::SR]'
/home/vicentinif/netket_compile/netket/Sources/Supervised/supervised.hpp:126:39: required from here
/home/vicentinif/netket_compile/netket/build/External/optional-lite/nonstd/optional.hpp:710:9: warning: 'netket::SR::SR(double, bool, bool, bool)' is deprecated [-Wdeprecated-declarations]
::new( value_ptr() ) value_type( std::forward<Args>(args)... );
^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /home/vicentinif/netket_compile/netket/Sources/Optimizer/py_stochastic_reconfiguration.hpp:19:0,
from /home/vicentinif/netket_compile/netket/Sources/Optimizer/py_optimizer.hpp:33,
from /home/vicentinif/netket_compile/netket/Sources/pynetket.cc:25:
/home/vicentinif/netket_compile/netket/Sources/Optimizer/stochastic_reconfiguration.hpp:69:12: note: declared here
explicit SR(double diagshift = 0.01, bool use_iterative = false,
^~
make[2]: *** [CMakeFiles/netket.dir/Sources/pynetket.cc.o] Error 1
make[1]: *** [CMakeFiles/netket.dir/all] Error 2
make: *** [all] Error 2
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